Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0014242

Physical Location & Seq

Genomic Coordinates Reverse (-)

28330283 .. 28331816

Gene Structure 1534 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G287900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGCAATGTATGCACCAAAAACAATCTTGTTCCACACATTAATCTGTCTTTTGTTAACTATGGCTTCACAATCAAAAGCATCGCTCAATTCCAACTATTATCATCAAACATGTCCACAAGCTGAGAAAATCATATTACAGACGGTATATAACGCTTTCATGCATGACCCTAAAATCCCAGCTCGTATCTTAAGGATGTTTTTCCATGATTGTTTCATAAGGGGATGTGATGCATCGTTGCTGCTAGACTCAACCCCAGGGAACCAAGCAGAAAAAGATGGTCCTCCCAATATCTCAGTCCGATCATTCTACGTGATCGACGATGCCAAAGCTAAGCTAGAAATGGCATGTCCACGCACTGTTTCTTGTGCTGATATCATTGGCATTGCCGCAAGAGACGTAGTTACCATGTCCGGAGGTCCTTACTGGAATGTGCTAAAAGGGAGGAAAGATGGCAGGGTTTCGAGAGCTAACGAGACCATCAACTTACCAGCTCCAACTTTCAACGTATCCCAATTGATCCAAAGCTTTGCTAGGAGGGGCTTGGGTGTTAAAGAATTGGTTGCCCTATCTGGCGGCCACACTCTTGGGTTCTCACATTGTTCTTCTTTTGAATCCCGGCTTCGAAATTTTACTTCATTGCATGATGTTGATCCAAGCATGAACAATGAATTTGCTCAAAAGCTAAGAAAGAAATGCCCAAAACCAAACAGGGATCGCACTGCCGGAGAGTTGTTGGACTCAACTTCCTCAACGTTTGATAATGATTATTACAAGCAAGTAGTGGCAGGAAAGGGCGTGTTTGGATCGGATCAAGCGTTGTTTAGTGATTACAGGACTAGATGGATTGTTGAATCATTTGCTGAGGATCAAAGTTTGTTCTTTAAGGAGTTTGCAGCTTCTATGGTGAAACTTGGAAATGCTGGCGTGATTGAGGATGGTGAAGTGAGACTGAATTGCCGAGTGGTGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009636 GO:0009664 GO:0009987 GO:0016043 GO:0016209 GO:0016491 GO:0016684 GO:0030054 GO:0030312 GO:0042221 GO:0044464 GO:0045229 GO:0050896 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

325

Amino Acids

36.02

Weight (kDa)

8.66

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014242)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51890
fragaria_vesca	FvH4_7g28760
malus_domestica	MD00G1004800.v1.1 MD01G1193700.v1.1 MD01G1194000.v1.1
prunus_persica	Prupe.2G287900_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0376321
rosa_laevigata	RLG00000026612
rosa_multiflora	Rmu_co8151018.1_g000001 Rmu_sc0016074.1_g000002
rosa_roxburghii	Rroxscaffold_4G00282210
rosa_rugosa	Rorug01G0395600
rosa_samantha	Rh1AG406600 Rh1BG370600 Rh1CG383400 Rh1DG400400
rosa_wichuraiana	Rw1G036090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	1 cut(s)	413
AciI	CCGC	2 cut(s)	390, 576
AclI	AACGTT	1 cut(s)	755
AclWI	GGATC	6 cut(s)	514, 647, 723, 814, 819, 876
AcoI	YGGCCR	1 cut(s)	577
AcsI	RAATTY	2 cut(s)	628, 671
AflII	CTTAAG	1 cut(s)	190
AflIII	ACRYGT	1 cut(s)	110
AgsI	TTSAA	3 cut(s)	505, 614, 854
AjnI	CCWGG	1 cut(s)	256
AluBI	AGCT	9 cut(s)	122, 182, 332, 337, 470, 494, 528, 685, 899
AluI	AGCT	9 cut(s)	122, 182, 332, 337, 470, 494, 528, 685, 899
Alw26I	GTCTC	3 cut(s)	390, 470, 943
AlwI	GGATC	6 cut(s)	514, 647, 723, 814, 819, 876
Aor13HI	TCCGGA	1 cut(s)	413
AoxI	GGCC	1 cut(s)	577
ApeKI	GCWGC	2 cut(s)	241, 896
ApoI	RAATTY	2 cut(s)	628, 671
AseI	ATTAAT	1 cut(s)	41
AspS9I	GGNCC	2 cut(s)	281, 419
AsuC2I	CCSGG	1 cut(s)	619
AsuHPI	GGTGA	2 cut(s)	919, 953
AsuII	TTCGAA	1 cut(s)	625
AvaII	GGWCC	2 cut(s)	281, 419
BbvCI	CCTCAGC	1 cut(s)	864
BbvI	GCAGC	2 cut(s)	228, 908
BccI	CCATC	5 cut(s)	272, 446, 488, 837, 932
BciT130I	CCWGG	1 cut(s)	258
BciVI	GTATCC	1 cut(s)	520
BcnI	CCSGG	1 cut(s)	619
BcoDI	GTCTC	3 cut(s)	390, 470, 943
BfaI	CTAG	4 cut(s)	245, 338, 534, 840
BfrI	CTTAAG	1 cut(s)	190
BfuI	GTATCC	1 cut(s)	520
BisI	GCNGC	4 cut(s)	242, 390, 577, 897
BlpI	GCTNAGC	1 cut(s)	333
BlsI	GCNGC	4 cut(s)	243, 391, 578, 898
Bme1390I	CCNGG	2 cut(s)	258, 619
Bme18I	GGWCC	2 cut(s)	281, 419
BmgT120I	GGNCC	2 cut(s)	281, 419
BmiI	GGNNCC	1 cut(s)	263
BmrFI	CCNGG	2 cut(s)	258, 619
BmsI	GCATC	4 cut(s)	89, 220, 242, 313
Bpu10I	CCTNAGC	1 cut(s)	864
Bpu1102I	GCTNAGC	1 cut(s)	333
Bpu14I	TTCGAA	1 cut(s)	625
BpuMI	CCSGG	1 cut(s)	619
BsaAI	YACGTR	1 cut(s)	313
BsaBI	GATNNNNATC	1 cut(s)	651
BsaI	GGTCTC	1 cut(s)	470
BsaJI	CCNNGG	2 cut(s)	256, 257
BsaWI	WCCGGW	1 cut(s)	413
Bse1I	ACTGG	1 cut(s)	431
Bse3DI	GCAATG	3 cut(s)	12, 384, 638
Bse8I	GATNNNNATC	1 cut(s)	651
BseAI	TCCGGA	1 cut(s)	413
BseBI	CCWGG	1 cut(s)	258
BseDI	CCNNGG	2 cut(s)	256, 257
BseGI	GGATG	3 cut(s)	201, 230, 943
BseJI	GATNNNNATC	1 cut(s)	651
BseMI	GCAATG	3 cut(s)	12, 384, 638
BseMII	CTCAG	3 cut(s)	114, 309, 855
BseNI	ACTGG	1 cut(s)	431
BseXI	GCAGC	2 cut(s)	228, 908
BseYI	CCCAGC	1 cut(s)	178
BshFI	GGCC	1 cut(s)	579
BsiSI	CCGG	3 cut(s)	414, 619, 726
BsmAI	GTCTC	3 cut(s)	390, 470, 943
BsmBI	CGTCTC	1 cut(s)	390
BsnI	GGCC	1 cut(s)	579
Bso31I	GGTCTC	1 cut(s)	470
Bsp119I	TTCGAA	1 cut(s)	625
Bsp13I	TCCGGA	1 cut(s)	413
Bsp143I	GATC	8 cut(s)	302, 315, 519, 652, 715, 806, 811, 868
Bsp1720I	GCTNAGC	1 cut(s)	333
BspACI	CCGC	2 cut(s)	390, 576
BspANI	GGCC	1 cut(s)	579
BspCNI	CTCAG	3 cut(s)	115, 308, 856
BspEI	TCCGGA	1 cut(s)	413
BspLI	GGNNCC	1 cut(s)	263
BspPI	GGATC	6 cut(s)	514, 647, 723, 814, 819, 876
BspT104I	TTCGAA	1 cut(s)	625
BspTI	CTTAAG	1 cut(s)	190
BspTNI	GGTCTC	1 cut(s)	470
BsrDI	GCAATG	3 cut(s)	12, 384, 638
BsrI	ACTGG	1 cut(s)	431
BssECI	CCNNGG	2 cut(s)	256, 257
BssMI	GATC	8 cut(s)	302, 315, 519, 652, 715, 806, 811, 868
Bst2UI	CCWGG	1 cut(s)	258
Bst4CI	ACNGT	2 cut(s)	145, 361
BstAFI	CTTAAG	1 cut(s)	190
BstAPI	GCANNNNNTGC	1 cut(s)	11
BstBAI	YACGTR	1 cut(s)	313
BstBI	TTCGAA	1 cut(s)	625
BstC8I	GCNNGC	1 cut(s)	925
BstDEI	CTNAG	5 cut(s)	123, 295, 333, 686, 864
BstF5I	GGATG	3 cut(s)	201, 230, 943
BstKTI	GATC	8 cut(s)	305, 318, 522, 655, 718, 809, 814, 871
BstMAI	GTCTC	3 cut(s)	390, 470, 943
BstMBI	GATC	8 cut(s)	302, 315, 519, 652, 715, 806, 811, 868
BstMWI	GCNNNNNNNGC	1 cut(s)	11
BstNI	CCWGG	1 cut(s)	258
BstNSI	RCATGY	2 cut(s)	114, 351
BstSCI	CCNGG	2 cut(s)	256, 617
BstV1I	GCAGC	2 cut(s)	228, 908
BstXI	CCANNNNNNTGG	1 cut(s)	587
BsuI	GTATCC	1 cut(s)	520
BsuRI	GGCC	1 cut(s)	579
BtgZI	GCGATG	1 cut(s)	66
BtsCI	GGATG	3 cut(s)	201, 230, 943
BtsI	GCAGTG	1 cut(s)	720
BtsIMutI	CAGTG	2 cut(s)	357, 720
Cac8I	GCNNGC	1 cut(s)	925
Cfr13I	GGNCC	2 cut(s)	281, 419
CviAII	CATG	8 cut(s)	111, 160, 164, 206, 348, 409, 644, 661
DdeI	CTNAG	5 cut(s)	123, 295, 333, 686, 864
DpnI	GATC	8 cut(s)	304, 317, 521, 654, 717, 808, 813, 870
DpnII	GATC	8 cut(s)	302, 315, 519, 652, 715, 806, 811, 868
EaeI	YGGCCR	1 cut(s)	577
Eco31I	GGTCTC	1 cut(s)	470
Eco32I	GATATC	1 cut(s)	376
Eco47I	GGWCC	2 cut(s)	281, 419
EcoO109I	RGGNCCY	1 cut(s)	419
EcoRII	CCWGG	1 cut(s)	256
EcoRV	GATATC	1 cut(s)	376
EcoT22I	ATGCAT	2 cut(s)	165, 235
Esp3I	CGTCTC	1 cut(s)	390
FaeI	CATG	8 cut(s)	114, 163, 167, 209, 351, 412, 647, 664
FatI	CATG	8 cut(s)	110, 159, 163, 205, 347, 408, 643, 660
Fnu4HI	GCNGC	4 cut(s)	242, 390, 577, 897
FokI	GGATG	3 cut(s)	208, 237, 950
Fsp4HI	GCNGC	4 cut(s)	242, 390, 577, 897
FspBI	CTAG	4 cut(s)	245, 338, 534, 840
GluI	GCNGC	4 cut(s)	242, 390, 577, 897
GsaI	CCCAGC	1 cut(s)	182
HaeIII	GGCC	1 cut(s)	579
HapII	CCGG	3 cut(s)	414, 619, 726
Hin1II	CATG	8 cut(s)	114, 163, 167, 209, 351, 412, 647, 664
HincII	GTYRAC	1 cut(s)	57
HindII	GTYRAC	1 cut(s)	57
HindIII	AAGCTT	1 cut(s)	526
HinfI	GANTC	4 cut(s)	248, 614, 740, 854
HpaI	GTTAAC	1 cut(s)	57
HpaII	CCGG	3 cut(s)	414, 619, 726
HphI	GGTGA	2 cut(s)	919, 953
Hpy166II	GTNNAC	4 cut(s)	57, 116, 353, 970
Hpy188I	TCNGA	2 cut(s)	302, 811
Hpy188III	TCNNGA	2 cut(s)	414, 465
Hpy8I	GTNNAC	4 cut(s)	57, 116, 353, 970
Hpy99I	CGWCG	1 cut(s)	323
HpyCH4III	ACNGT	2 cut(s)	145, 361
HpyCH4IV	ACGT	4 cut(s)	312, 399, 507, 755
HpyCH4V	TGCA	5 cut(s)	14, 163, 233, 643, 896
HpyF10VI	GCNNNNNNNGC	1 cut(s)	11
HpyF3I	CTNAG	5 cut(s)	123, 295, 333, 686, 864
HpySE526I	ACGT	4 cut(s)	312, 399, 507, 755
Hsp92II	CATG	8 cut(s)	114, 163, 167, 209, 351, 412, 647, 664
Kpn2I	TCCGGA	1 cut(s)	413
KspAI	GTTAAC	1 cut(s)	57
Kzo9I	GATC	8 cut(s)	302, 315, 519, 652, 715, 806, 811, 868
LmnI	GCTCC	1 cut(s)	499
Lsp1109I	GCAGC	2 cut(s)	228, 908
LweI	GCATC	4 cut(s)	89, 220, 242, 313
MaeI	CTAG	4 cut(s)	245, 338, 534, 840
MaeII	ACGT	4 cut(s)	312, 399, 507, 755
MaeIII	GTNAC	1 cut(s)	403
MalI	GATC	8 cut(s)	304, 317, 521, 654, 717, 808, 813, 870
MboI	GATC	8 cut(s)	302, 315, 519, 652, 715, 806, 811, 868
MboII	GAAGA	1 cut(s)	597
MfeI	CAATTG	1 cut(s)	515
MluCI	AATT	6 cut(s)	88, 515, 557, 628, 671, 955
MlyI	GAGTC	2 cut(s)	242, 734
MmeI	TCCRAC	3 cut(s)	117, 521, 717
MnlI	CCTC	7 cut(s)	294, 410, 438, 531, 760, 859, 928
Mph1103I	ATGCAT	2 cut(s)	165, 235
MroI	TCCGGA	1 cut(s)	413
MseI	TTAA	5 cut(s)	41, 56, 191, 552, 885
MspCI	CTTAAG	1 cut(s)	190
MspI	CCGG	3 cut(s)	414, 619, 726
MspR9I	CCNGG	2 cut(s)	258, 619
MunI	CAATTG	1 cut(s)	515
MvaI	CCWGG	1 cut(s)	258
MwoI	GCNNNNNNNGC	1 cut(s)	11
NciI	CCSGG	1 cut(s)	619
NdeII	GATC	8 cut(s)	302, 315, 519, 652, 715, 806, 811, 868
NlaIII	CATG	8 cut(s)	114, 163, 167, 209, 351, 412, 647, 664
NlaIV	GGNNCC	1 cut(s)	263
NsiI	ATGCAT	2 cut(s)	165, 235
NspI	RCATGY	2 cut(s)	114, 351
NspV	TTCGAA	1 cut(s)	625
PasI	CCCWGGG	1 cut(s)	257
PciI	ACATGT	1 cut(s)	110
PcsI	WCGNNNNNNNCGW	2 cut(s)	318, 815
PfeI	GAWTC	2 cut(s)	614, 854
PkrI	GCNGC	4 cut(s)	243, 391, 578, 898
PleI	GAGTC	2 cut(s)	242, 734
PpsI	GAGTC	2 cut(s)	242, 734
Ppu21I	YACGTR	1 cut(s)	313
PpuMI	RGGWCCY	1 cut(s)	419
PscI	ACATGT	1 cut(s)	110
PshBI	ATTAAT	1 cut(s)	41
Psp1406I	AACGTT	1 cut(s)	755
Psp5II	RGGWCCY	1 cut(s)	419
Psp6I	CCWGG	1 cut(s)	256
PspFI	CCCAGC	1 cut(s)	178
PspGI	CCWGG	1 cut(s)	256
PspN4I	GGNNCC	1 cut(s)	263
PspPI	GGNCC	2 cut(s)	281, 419
PspPPI	RGGWCCY	1 cut(s)	419
SaqAI	TTAA	5 cut(s)	41, 56, 191, 552, 885
SatI	GCNGC	4 cut(s)	242, 390, 577, 897
Sau3AI	GATC	8 cut(s)	302, 315, 519, 652, 715, 806, 811, 868
Sau96I	GGNCC	2 cut(s)	281, 419
SchI	GAGTC	2 cut(s)	242, 734
ScrFI	CCNGG	2 cut(s)	258, 619
SfaNI	GCATC	4 cut(s)	89, 220, 242, 313
SfuI	TTCGAA	1 cut(s)	625
SinI	GGWCC	2 cut(s)	281, 419
SmlI	CTYRAG	1 cut(s)	190
SmoI	CTYRAG	1 cut(s)	190
Sse9I	AATT	6 cut(s)	88, 515, 557, 628, 671, 955
SsiI	CCGC	2 cut(s)	390, 576
SspMI	CTAG	4 cut(s)	245, 338, 534, 840
StyD4I	CCNGG	2 cut(s)	256, 617
TaaI	ACNGT	2 cut(s)	145, 361
TaiI	ACGT	4 cut(s)	315, 402, 510, 758
TaqI	TCGA	3 cut(s)	318, 464, 625
TasI	AATT	6 cut(s)	88, 515, 557, 628, 671, 955
TauI	GCSGC	2 cut(s)	392, 579
TfiI	GAWTC	2 cut(s)	614, 854
Tru1I	TTAA	5 cut(s)	41, 56, 191, 552, 885
Tru9I	TTAA	5 cut(s)	41, 56, 191, 552, 885
TscAI	CASTG	2 cut(s)	364, 727
TseI	GCWGC	2 cut(s)	241, 896
TspDTI	ATGAA	5 cut(s)	148, 205, 627, 677, 684
TspRI	CASTG	2 cut(s)	364, 727
Vha464I	CTTAAG	1 cut(s)	190
VpaK11BI	GGWCC	2 cut(s)	281, 419
VspI	ATTAAT	1 cut(s)	41
XapI	RAATTY	2 cut(s)	628, 671
XceI	RCATGY	2 cut(s)	114, 351
XspI	CTAG	4 cut(s)	245, 338, 534, 840
Zsp2I	ATGCAT	2 cut(s)	165, 235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.