At3g49055-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G49055 |
| fragaria_vesca | FvH4_7g29830 FvH4_7g29830 FvH4_7g29830 FvH4_7g29830 FvH4_7g29830 |
| malus_domestica | MD01G1204900.v1.1 MD07G1273400.v1.1 |
| prunus_persica | Prupe.2G297300_v2.0.a1 |
| pyrus_communis | pycom01g21450 pycom07g25000 |
| rosa_chinensis | RchiOBHm_Chr1g0377801 |
| rosa_laevigata | RLG00000026497 |
| rosa_multiflora | Rmu_co8376285.1_g000001 Rmu_sc0004824.1_g000002 Rmu_sc0036419.1_g000001 Rmu_sc0040831.1_g000001 Rmu_sc0041379.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00029020 Rroxscaffold_4G00281050 |
| rosa_rugosa | Rorug01G0405200 |
| rosa_samantha | Rh1AG427200 Rh1BG382100 Rh1CG396000 Rh1DG413100 Rh5BG351000 Rh5CG377200 Rh5DG364900 |
| rosa_wichuraiana | Rw1G037140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1611 |
| AccI | GTMKAC | 2 cut(s) | 452, 911 |
| AccII | CGCG | 2 cut(s) | 605, 1263 |
| AciI | CCGC | 7 cut(s) | 53, 143, 590, 1193, 1373, 1421, 1438 |
| AclWI | GGATC | 2 cut(s) | 44, 734 |
| AcoI | YGGCCR | 3 cut(s) | 792, 1365, 1517 |
| AcsI | RAATTY | 2 cut(s) | 231, 264 |
| AcuI | CTGAAG | 2 cut(s) | 594, 1304 |
| AfaI | GTAC | 2 cut(s) | 635, 1112 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1405 |
| AflIII | ACRYGT | 1 cut(s) | 1320 |
| AjnI | CCWGG | 2 cut(s) | 13, 192 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 650, 682, 1277, 1309 |
| Alw21I | GWGCWC | 1 cut(s) | 99 |
| Alw26I | GTCTC | 5 cut(s) | 177, 240, 252, 371, 1073 |
| AlwI | GGATC | 2 cut(s) | 44, 734 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1052, 1388 |
| Ama87I | CYCGRG | 1 cut(s) | 98 |
| AoxI | GGCC | 6 cut(s) | 43, 189, 463, 792, 1365, 1517 |
| ApeKI | GCWGC | 7 cut(s) | 614, 1310, 1358, 1382, 1385, 1402, 1429 |
| ApoI | RAATTY | 2 cut(s) | 231, 264 |
| AspLEI | GCGC | 3 cut(s) | 1059, 1378, 1488 |
| AspS9I | GGNCC | 4 cut(s) | 44, 190, 463, 1395 |
| AsuHPI | GGTGA | 4 cut(s) | 503, 637, 694, 1513 |
| AvaI | CYCGRG | 1 cut(s) | 98 |
| AvaII | GGWCC | 1 cut(s) | 1395 |
| BalI | TGGCCA | 2 cut(s) | 794, 1519 |
| BanII | GRGCYC | 1 cut(s) | 99 |
| BbsI | GAAGAC | 2 cut(s) | 162, 1307 |
| Bbv12I | GWGCWC | 1 cut(s) | 99 |
| BbvI | GCAGC | 7 cut(s) | 601, 1297, 1370, 1394, 1397, 1414, 1416 |
| BccI | CCATC | 5 cut(s) | 142, 296, 476, 841, 1200 |
| BceAI | ACGGC | 4 cut(s) | 58, 156, 1016, 1380 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 328, 362 |
| BciT130I | CCWGG | 2 cut(s) | 15, 194 |
| BcoDI | GTCTC | 5 cut(s) | 177, 240, 252, 371, 1073 |
| BfaI | CTAG | 6 cut(s) | 212, 372, 551, 557, 1041, 1203 |
| BfmI | CTRYAG | 3 cut(s) | 615, 975, 1400 |
| BfoI | RGCGCY | 1 cut(s) | 1060 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1373 |
| BglII | AGATCT | 1 cut(s) | 1025 |
| Bme1390I | CCNGG | 2 cut(s) | 15, 194 |
| Bme18I | GGWCC | 1 cut(s) | 1395 |
| BmeT110I | CYCGRG | 1 cut(s) | 98 |
| BmgT120I | GGNCC | 4 cut(s) | 44, 190, 463, 1395 |
| BmiI | GGNNCC | 1 cut(s) | 1397 |
| BmrFI | CCNGG | 2 cut(s) | 15, 194 |
| BmsI | GCATC | 4 cut(s) | 430, 889, 977, 1496 |
| BpiI | GAAGAC | 2 cut(s) | 162, 1307 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 237, 269, 1012, 1044 |
| BpmI | CTGGAG | 1 cut(s) | 431 |
| Bpu10I | CCTNAGC | 1 cut(s) | 722 |
| BpuEI | CTTGAG | 3 cut(s) | 419, 896, 1071 |
| BsaBI | GATNNNNATC | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 4 cut(s) | 192, 456, 1368, 1520 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 746, 776 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1405 |
| Bse1I | ACTGG | 2 cut(s) | 112, 448 |
| Bse3DI | GCAATG | 1 cut(s) | 868 |
| Bse8I | GATNNNNATC | 1 cut(s) | 81 |
| BseBI | CCWGG | 2 cut(s) | 15, 194 |
| BseDI | CCNNGG | 4 cut(s) | 192, 456, 1368, 1520 |
| BseGI | GGATG | 2 cut(s) | 445, 904 |
| BseJI | GATNNNNATC | 1 cut(s) | 81 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1405 |
| BseMI | GCAATG | 1 cut(s) | 868 |
| BseMII | CTCAG | 5 cut(s) | 84, 278, 1010, 1044, 1380 |
| BseNI | ACTGG | 2 cut(s) | 112, 448 |
| BseRI | GAGGAG | 2 cut(s) | 341, 710 |
| BseXI | GCAGC | 7 cut(s) | 601, 1297, 1370, 1394, 1397, 1414, 1416 |
| BseYI | CCCAGC | 1 cut(s) | 1238 |
| BsgI | GTGCAG | 1 cut(s) | 1127 |
| Bsh1236I | CGCG | 2 cut(s) | 605, 1263 |
| BshFI | GGCC | 6 cut(s) | 45, 191, 465, 794, 1367, 1519 |
| BsiHKAI | GWGCWC | 1 cut(s) | 99 |
| BsiHKCI | CYCGRG | 1 cut(s) | 98 |
| BsiSI | CCGG | 1 cut(s) | 237 |
| BslFI | GGGAC | 4 cut(s) | 88, 544, 719, 1381 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1405 |
| BsmAI | GTCTC | 5 cut(s) | 177, 240, 252, 371, 1073 |
| BsmBI | CGTCTC | 2 cut(s) | 177, 252 |
| BsmFI | GGGAC | 4 cut(s) | 88, 544, 719, 1381 |
| BsnI | GGCC | 6 cut(s) | 45, 191, 465, 794, 1367, 1519 |
| BsoBI | CYCGRG | 1 cut(s) | 98 |
| Bsp1286I | GDGCHC | 1 cut(s) | 99 |
| Bsp143I | GATC | 7 cut(s) | 49, 76, 82, 726, 1025, 1170, 1272 |
| Bsp19I | CCATGG | 2 cut(s) | 1368, 1520 |
| Bsp68I | TCGCGA | 1 cut(s) | 605 |
| BspACI | CCGC | 7 cut(s) | 53, 143, 590, 1193, 1373, 1421, 1438 |
| BspANI | GGCC | 6 cut(s) | 45, 191, 465, 794, 1367, 1519 |
| BspCNI | CTCAG | 5 cut(s) | 85, 279, 1011, 1045, 1381 |
| BspFNI | CGCG | 2 cut(s) | 605, 1263 |
| BspHI | TCATGA | 1 cut(s) | 79 |
| BspLI | GGNNCC | 1 cut(s) | 1397 |
| BspMAI | CTGCAG | 2 cut(s) | 619, 1404 |
| BspPI | GGATC | 2 cut(s) | 44, 734 |
| BsrDI | GCAATG | 1 cut(s) | 868 |
| BsrI | ACTGG | 2 cut(s) | 112, 448 |
| BssECI | CCNNGG | 4 cut(s) | 192, 456, 1368, 1520 |
| BssMI | GATC | 7 cut(s) | 49, 76, 82, 726, 1025, 1170, 1272 |
| BssT1I | CCWWGG | 3 cut(s) | 456, 1368, 1520 |
| Bst2UI | CCWGG | 2 cut(s) | 15, 194 |
| Bst4CI | ACNGT | 3 cut(s) | 382, 870, 976 |
| Bst6I | CTCTTC | 3 cut(s) | 573, 779, 942 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1600 |
| BstC8I | GCNNGC | 5 cut(s) | 719, 779, 1380, 1407, 1596 |
| BstDEI | CTNAG | 6 cut(s) | 93, 287, 722, 1019, 1053, 1389 |
| BstDSI | CCRYGG | 2 cut(s) | 1368, 1520 |
| BstF5I | GGATG | 2 cut(s) | 445, 904 |
| BstFNI | CGCG | 2 cut(s) | 605, 1263 |
| BstH2I | RGCGCY | 1 cut(s) | 1060 |
| BstHHI | GCGC | 3 cut(s) | 1059, 1378, 1488 |
| BstKTI | GATC | 7 cut(s) | 52, 79, 85, 729, 1028, 1173, 1275 |
| BstMAI | GTCTC | 5 cut(s) | 177, 240, 252, 371, 1073 |
| BstMBI | GATC | 7 cut(s) | 49, 76, 82, 726, 1025, 1170, 1272 |
| BstNI | CCWGG | 2 cut(s) | 15, 194 |
| BstNSI | RCATGY | 1 cut(s) | 1324 |
| BstSCI | CCNGG | 2 cut(s) | 13, 192 |
| BstSFI | CTRYAG | 3 cut(s) | 615, 975, 1400 |
| BstUI | CGCG | 2 cut(s) | 605, 1263 |
| BstV1I | GCAGC | 7 cut(s) | 601, 1297, 1370, 1394, 1397, 1414, 1416 |
| BstV2I | GAAGAC | 2 cut(s) | 162, 1307 |
| BstX2I | RGATCY | 2 cut(s) | 49, 1025 |
| BstYI | RGATCY | 2 cut(s) | 49, 1025 |
| BsuRI | GGCC | 6 cut(s) | 45, 191, 465, 794, 1367, 1519 |
| BtgI | CCRYGG | 2 cut(s) | 1368, 1520 |
| BtgZI | GCGATG | 1 cut(s) | 161 |
| BtsCI | GGATG | 2 cut(s) | 445, 904 |
| BtsI | GCAGTG | 1 cut(s) | 624 |
| BtsIMutI | CAGTG | 2 cut(s) | 624, 1050 |
| BtuMI | TCGCGA | 1 cut(s) | 605 |
| Cac8I | GCNNGC | 5 cut(s) | 719, 779, 1380, 1407, 1596 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1052, 1388 |
| CciI | TCATGA | 1 cut(s) | 79 |
| CfoI | GCGC | 3 cut(s) | 1059, 1378, 1488 |
| Cfr13I | GGNCC | 4 cut(s) | 44, 190, 463, 1395 |
| CseI | GACGC | 2 cut(s) | 300, 1421 |
| Csp6I | GTAC | 2 cut(s) | 634, 1111 |
| CviAII | CATG | 5 cut(s) | 80, 356, 1321, 1369, 1521 |
| CviQI | GTAC | 2 cut(s) | 634, 1111 |
| DdeI | CTNAG | 6 cut(s) | 93, 287, 722, 1019, 1053, 1389 |
| DpnI | GATC | 7 cut(s) | 51, 78, 84, 728, 1027, 1172, 1274 |
| DpnII | GATC | 7 cut(s) | 49, 76, 82, 726, 1025, 1170, 1272 |
| EaeI | YGGCCR | 3 cut(s) | 792, 1365, 1517 |
| Eam1104I | CTCTTC | 3 cut(s) | 573, 779, 942 |
| EarI | CTCTTC | 3 cut(s) | 573, 779, 942 |
| EciI | GGCGGA | 1 cut(s) | 42 |
| Ecl136II | GAGCTC | 1 cut(s) | 97 |
| Eco130I | CCWWGG | 3 cut(s) | 456, 1368, 1520 |
| Eco24I | GRGCYC | 1 cut(s) | 99 |
| Eco47I | GGWCC | 1 cut(s) | 1395 |
| Eco53kI | GAGCTC | 1 cut(s) | 97 |
| Eco57I | CTGAAG | 2 cut(s) | 594, 1304 |
| Eco88I | CYCGRG | 1 cut(s) | 98 |
| EcoICRI | GAGCTC | 1 cut(s) | 97 |
| EcoO109I | RGGNCCY | 3 cut(s) | 190, 463, 1395 |
| EcoRII | CCWGG | 2 cut(s) | 13, 192 |
| EcoT14I | CCWWGG | 3 cut(s) | 456, 1368, 1520 |
| EcoT22I | ATGCAT | 1 cut(s) | 1511 |
| EcoT38I | GRGCYC | 1 cut(s) | 99 |
| ErhI | CCWWGG | 3 cut(s) | 456, 1368, 1520 |
| Esp3I | CGTCTC | 2 cut(s) | 177, 252 |
| FaeI | CATG | 5 cut(s) | 83, 359, 1324, 1372, 1524 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1587, 1619 |
| FaqI | GGGAC | 4 cut(s) | 88, 544, 719, 1381 |
| FatI | CATG | 5 cut(s) | 79, 355, 1320, 1368, 1520 |
| FauNDI | CATATG | 1 cut(s) | 1511 |
| FblI | GTMKAC | 2 cut(s) | 452, 911 |
| FokI | GGATG | 2 cut(s) | 452, 911 |
| FriOI | GRGCYC | 1 cut(s) | 99 |
| FspBI | CTAG | 6 cut(s) | 212, 372, 551, 557, 1041, 1203 |
| GlaI | GCGC | 3 cut(s) | 1058, 1377, 1487 |
| GsaI | CCCAGC | 1 cut(s) | 1242 |
| GsuI | CTGGAG | 1 cut(s) | 431 |
| HaeII | RGCGCY | 1 cut(s) | 1060 |
| HaeIII | GGCC | 6 cut(s) | 45, 191, 465, 794, 1367, 1519 |
| HapII | CCGG | 1 cut(s) | 237 |
| HgaI | GACGC | 2 cut(s) | 300, 1421 |
| HhaI | GCGC | 3 cut(s) | 1059, 1378, 1488 |
| Hin1II | CATG | 5 cut(s) | 83, 359, 1324, 1372, 1524 |
| Hin6I | GCGC | 3 cut(s) | 1057, 1376, 1486 |
| HinP1I | GCGC | 3 cut(s) | 1057, 1376, 1486 |
| HincII | GTYRAC | 2 cut(s) | 453, 1146 |
| HindII | GTYRAC | 2 cut(s) | 453, 1146 |
| HindIII | AAGCTT | 2 cut(s) | 279, 1215 |
| HinfI | GANTC | 4 cut(s) | 101, 248, 542, 1037 |
| HpaI | GTTAAC | 1 cut(s) | 1146 |
| HpaII | CCGG | 1 cut(s) | 237 |
| HphI | GGTGA | 4 cut(s) | 503, 637, 694, 1513 |
| Hpy166II | GTNNAC | 4 cut(s) | 453, 912, 1146, 1540 |
| Hpy188I | TCNGA | 8 cut(s) | 76, 90, 227, 257, 288, 931, 1048, 1284 |
| Hpy188III | TCNNGA | 7 cut(s) | 80, 172, 604, 1031, 1088, 1168, 1455 |
| Hpy8I | GTNNAC | 4 cut(s) | 453, 912, 1146, 1540 |
| Hpy99I | CGWCG | 1 cut(s) | 326 |
| HpyAV | CCTTC | 7 cut(s) | 116, 334, 616, 655, 736, 753, 1491 |
| HpyCH4III | ACNGT | 3 cut(s) | 382, 870, 976 |
| HpyCH4IV | ACGT | 1 cut(s) | 1104 |
| HpyF3I | CTNAG | 6 cut(s) | 93, 287, 722, 1019, 1053, 1389 |
| HpySE526I | ACGT | 1 cut(s) | 1104 |
| Hsp92II | CATG | 5 cut(s) | 83, 359, 1324, 1372, 1524 |
| HspAI | GCGC | 3 cut(s) | 1057, 1376, 1486 |
| KspAI | GTTAAC | 1 cut(s) | 1146 |
| Kzo9I | GATC | 7 cut(s) | 49, 76, 82, 726, 1025, 1170, 1272 |
| LmnI | GCTCC | 2 cut(s) | 394, 858 |
| Lsp1109I | GCAGC | 7 cut(s) | 601, 1297, 1370, 1394, 1397, 1414, 1416 |
| LweI | GCATC | 4 cut(s) | 430, 889, 977, 1496 |
| MaeI | CTAG | 6 cut(s) | 212, 372, 551, 557, 1041, 1203 |
| MaeII | ACGT | 1 cut(s) | 1104 |
| MaeIII | GTNAC | 2 cut(s) | 592, 870 |
| MalI | GATC | 7 cut(s) | 51, 78, 84, 728, 1027, 1172, 1274 |
| MboI | GATC | 7 cut(s) | 49, 76, 82, 726, 1025, 1170, 1272 |
| MflI | RGATCY | 2 cut(s) | 49, 1025 |
| MhlI | GDGCHC | 1 cut(s) | 99 |
| MlsI | TGGCCA | 2 cut(s) | 794, 1519 |
| MluNI | TGGCCA | 2 cut(s) | 794, 1519 |
| MlyI | GAGTC | 2 cut(s) | 110, 242 |
| MmeI | TCCRAC | 1 cut(s) | 876 |
| Mox20I | TGGCCA | 2 cut(s) | 794, 1519 |
| Mph1103I | ATGCAT | 1 cut(s) | 1511 |
| MscI | TGGCCA | 2 cut(s) | 794, 1519 |
| MseI | TTAA | 2 cut(s) | 1145, 1605 |
| Msp20I | TGGCCA | 2 cut(s) | 794, 1519 |
| MspA1I | CMGCKG | 3 cut(s) | 614, 1388, 1405 |
| MspI | CCGG | 1 cut(s) | 237 |
| MspR9I | CCNGG | 2 cut(s) | 15, 194 |
| MvaI | CCWGG | 2 cut(s) | 15, 194 |
| MvnI | CGCG | 2 cut(s) | 605, 1263 |
| NcoI | CCATGG | 2 cut(s) | 1368, 1520 |
| NdeI | CATATG | 1 cut(s) | 1511 |
| NdeII | GATC | 7 cut(s) | 49, 76, 82, 726, 1025, 1170, 1272 |
| NlaIII | CATG | 5 cut(s) | 83, 359, 1324, 1372, 1524 |
| NlaIV | GGNNCC | 1 cut(s) | 1397 |
| NmuCI | GTSAC | 1 cut(s) | 870 |
| NruI | TCGCGA | 1 cut(s) | 605 |
| NsiI | ATGCAT | 1 cut(s) | 1511 |
| NspI | RCATGY | 1 cut(s) | 1324 |
| PaeR7I | CTCGAG | 1 cut(s) | 98 |
| PagI | TCATGA | 1 cut(s) | 79 |
| PciI | ACATGT | 1 cut(s) | 1320 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 602 |
| PfeI | GAWTC | 2 cut(s) | 542, 1037 |
| PflFI | GACNNNGTC | 1 cut(s) | 212 |
| PfoI | TCCNGGA | 1 cut(s) | 13 |
| PleI | GAGTC | 2 cut(s) | 109, 242 |
| PpsI | GAGTC | 2 cut(s) | 109, 242 |
| PpuMI | RGGWCCY | 1 cut(s) | 1395 |
| PscI | ACATGT | 1 cut(s) | 1320 |
| PsiI | TTATAA | 1 cut(s) | 1611 |
| Psp124BI | GAGCTC | 1 cut(s) | 99 |
| Psp5II | RGGWCCY | 1 cut(s) | 1395 |
| Psp6I | CCWGG | 2 cut(s) | 13, 192 |
| PspFI | CCCAGC | 1 cut(s) | 1238 |
| PspGI | CCWGG | 2 cut(s) | 13, 192 |
| PspN4I | GGNNCC | 1 cut(s) | 1397 |
| PspPI | GGNCC | 4 cut(s) | 44, 190, 463, 1395 |
| PspPPI | RGGWCCY | 1 cut(s) | 1395 |
| PspXI | VCTCGAGB | 1 cut(s) | 98 |
| PstI | CTGCAG | 2 cut(s) | 619, 1404 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1052, 1388 |
| PsuI | RGATCY | 2 cut(s) | 49, 1025 |
| PsyI | GACNNNGTC | 1 cut(s) | 212 |
| PvuII | CAGCTG | 3 cut(s) | 614, 1388, 1405 |
| RruI | TCGCGA | 1 cut(s) | 605 |
| RsaI | GTAC | 2 cut(s) | 635, 1112 |
| RsaNI | GTAC | 2 cut(s) | 634, 1111 |
| SacI | GAGCTC | 1 cut(s) | 99 |
| SalI | GTCGAC | 1 cut(s) | 451 |
| SaqAI | TTAA | 2 cut(s) | 1145, 1605 |
| Sau3AI | GATC | 7 cut(s) | 49, 76, 82, 726, 1025, 1170, 1272 |
| Sau96I | GGNCC | 4 cut(s) | 44, 190, 463, 1395 |
| SchI | GAGTC | 2 cut(s) | 110, 242 |
| ScrFI | CCNGG | 2 cut(s) | 15, 194 |
| SduI | GDGCHC | 1 cut(s) | 99 |
| SfaNI | GCATC | 4 cut(s) | 430, 889, 977, 1496 |
| SfcI | CTRYAG | 3 cut(s) | 615, 975, 1400 |
| Sfr274I | CTCGAG | 1 cut(s) | 98 |
| SinI | GGWCC | 1 cut(s) | 1395 |
| SlaI | CTCGAG | 1 cut(s) | 98 |
| SmlI | CTYRAG | 4 cut(s) | 98, 398, 875, 1086 |
| SmoI | CTYRAG | 4 cut(s) | 98, 398, 875, 1086 |
| SsiI | CCGC | 7 cut(s) | 53, 143, 590, 1193, 1373, 1421, 1438 |
| SspMI | CTAG | 6 cut(s) | 212, 372, 551, 557, 1041, 1203 |
| SstI | GAGCTC | 1 cut(s) | 99 |
| StyD4I | CCNGG | 2 cut(s) | 13, 192 |
| StyI | CCWWGG | 3 cut(s) | 456, 1368, 1520 |
| TaaI | ACNGT | 3 cut(s) | 382, 870, 976 |
| TaiI | ACGT | 1 cut(s) | 1107 |
| TaqI | TCGA | 6 cut(s) | 99, 321, 452, 971, 1015, 1173 |
| TatI | WGTACW | 2 cut(s) | 633, 1110 |
| TauI | GCSGC | 3 cut(s) | 146, 1376, 1424 |
| TfiI | GAWTC | 2 cut(s) | 542, 1037 |
| Tru1I | TTAA | 2 cut(s) | 1145, 1605 |
| Tru9I | TTAA | 2 cut(s) | 1145, 1605 |
| TscAI | CASTG | 2 cut(s) | 624, 1057 |
| TseFI | GTSAC | 1 cut(s) | 870 |
| TseI | GCWGC | 7 cut(s) | 614, 1310, 1358, 1382, 1385, 1402, 1429 |
| Tsp45I | GTSAC | 1 cut(s) | 870 |
| TspDTI | ATGAA | 3 cut(s) | 510, 879, 1004 |
| TspRI | CASTG | 2 cut(s) | 624, 1057 |
| Tth111I | GACNNNGTC | 1 cut(s) | 212 |
| VpaK11BI | GGWCC | 1 cut(s) | 1395 |
| XapI | RAATTY | 2 cut(s) | 231, 264 |
| XceI | RCATGY | 1 cut(s) | 1324 |
| XhoI | CTCGAG | 1 cut(s) | 98 |
| XmiI | GTMKAC | 2 cut(s) | 452, 911 |
| XspI | CTAG | 6 cut(s) | 212, 372, 551, 557, 1041, 1203 |
| Zsp2I | ATGCAT | 1 cut(s) | 1511 |