Prupe.2G312000_v2.0.a1

RING-H2 finger protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
29475335 .. 29477881
2547 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G312000.1

Sequence Viewer

Length: 1197 bp
ATGCAAACTCATGCCAGATGCGATATATACATTGGAATTGGAATTGGAAGTGTAGCAATTGTGCCTGCTATTCCAAGTAGCAAAAAAATGAATATTTTCATAGCCATCTTCTCCTCCTTTCTCTTCTTCTTGTCATTCTCATACCTTGCAAGCAGCAGCAGCAGCAGCTCCTCAGAAAATTGCTTGCAGGAGGATGTTTGCTTCAAGGGCGAGCCAAACATTAAATTCCCCTTCGGGATAACAAAAAGCCAGCCACAGTCATGTACTTATCCGGGGTTTGAACTATCCTGTGACATCACCAACCAAACAATCCTCAACTTCCCATATTCCGGAGATTTCACTATCCAAGGCATAGACTATGCGGAACAACAAATATGGATCAACGATCCAAACAACTGCCTCCCGCAGCGAATTCTGACGCTCAACCTCTCGGGCTCTCCATTTCACGGCGTGACAAACGAAACCTTCACGTTCTTCAATTGCTCGCTGGATTATTTGAAGTACAAGCTCAACCCAATTGCTTGCCTCAGCGGTTCTACGTACACAGTTTTTGCTACCACTTCTACCAAGGTGATTGATTATTTGTCGTCTTCGCCCACATGCAATCGAACTGGTACCTTTGTTGTTCCGGTTGATGTTCCGTTGTACGACGAGGTTATGTCGTCGGACCTGACTGATCATCTCCGGCTGACGTGGGACATGCCCGGGTGCGGCAGGTGCGCGGCGCGTGGTGGCCAGTGTGGGTTCAAGACCAATTCAAGTCACCAAGTTGTTTGCTCAAACCTTCCTCAACGAGGAATTCCAAGGAGCGCCCGGTATGCCATTACTGTGGGTGTTGGAGTGCCAGCAATCTTGTGCATTTTGGGGCTTTTATGTTGTGTATGTAGCAAGGTCAAGTCTTTCACAAGGGGACGCAGAACTCTGCCGGAATTTAATTCCATAGTGGCTCCACAGCCCACTGTCGTTATGGGCCTCGATAGGCCCAGGCTCGAGGCCTACCCGAAAATCATCCTTGGCGAAAGCCGGCGACTACCAAAGCCCGACGATAACACGTGCCCGATATGCTTGTCGGAGTACCGGCCCAAGGAGACATTGAAGACCATACCCAAATGCCAACATTGCTTCCATGCTGACTGCATTGATGAATGGCTTCAAATGAATGCTACCTGCCCTATTTGTAGGAATTCTCCACCATGA

Protein Analysis

399

Amino Acids

43.94

Weight (kDa)

7.94

Isoelectric Point (pI)

50.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 705
Acc36I ACCTGC 2 cut(s) 705, 1175
Acc65I GGTACC 1 cut(s) 614
AccB1I GGYRCC 1 cut(s) 614
AccII CGCG 2 cut(s) 722, 727
AccIII TCCGGA 1 cut(s) 329
AciI CCGC 5 cut(s) 362, 404, 531, 711, 722
AclWI GGATC 2 cut(s) 380, 386
AcoI YGGCCR 1 cut(s) 733
AcsI RAATTY 5 cut(s) 224, 411, 798, 929, 1183
AcvI CACGTG 1 cut(s) 1053
AdeI CACNNNGTG 1 cut(s) 451
AfaI GTAC 6 cut(s) 265, 503, 542, 616, 647, 1076
AfiI CCNNNNNNNGG 5 cut(s) 329, 446, 710, 794, 1084
AflIII ACRYGT 1 cut(s) 1050
AgsI TTSAA 8 cut(s) 205, 281, 478, 499, 748, 759, 1096, 1154
AjiI CACGTC 1 cut(s) 693
AjnI CCWGG 1 cut(s) 983
AluBI AGCT 2 cut(s) 168, 508
AluI AGCT 2 cut(s) 168, 508
Alw26I GTCTC 1 cut(s) 1082
AlwI GGATC 2 cut(s) 380, 386
Ama87I CYCGRG 3 cut(s) 430, 704, 989
Aor13HI TCCGGA 1 cut(s) 329
AoxI GGCC 5 cut(s) 733, 970, 980, 993, 1079
ApeKI GCWGC 6 cut(s) 153, 156, 159, 162, 165, 406
ApoI RAATTY 5 cut(s) 224, 411, 798, 929, 1183
Asp700I GAANNNNTTC 2 cut(s) 95, 1149
Asp718I GGTACC 1 cut(s) 614
AspLEI GCGC 3 cut(s) 722, 727, 812
AspS9I GGNCC 4 cut(s) 667, 970, 981, 1080
AsuC2I CCSGG 4 cut(s) 273, 705, 706, 814
AsuHPI GGTGA 3 cut(s) 289, 583, 755
AvaI CYCGRG 3 cut(s) 430, 704, 989
AvaII GGWCC 1 cut(s) 667
BaeGI GKGCMC 1 cut(s) 1058
BaeI ACNNNNGTAYC 2 cut(s) 606, 639
BalI TGGCCA 1 cut(s) 735
BanI GGYRCC 1 cut(s) 614
BanII GRGCYC 1 cut(s) 437
BbrPI CACGTG 1 cut(s) 1053
BbsI GAAGAC 2 cut(s) 582, 1103
BbvCI CCTCAGC 1 cut(s) 527
BbvI GCAGC 6 cut(s) 165, 168, 171, 174, 177, 418
BccI CCATC 1 cut(s) 113
BceAI ACGGC 1 cut(s) 463
BciT130I CCWGG 1 cut(s) 985
BclI TGATCA 1 cut(s) 676
BcnI CCSGG 4 cut(s) 273, 705, 706, 814
BcoDI GTCTC 1 cut(s) 1082
BfoI RGCGCY 1 cut(s) 813
BfuAI ACCTGC 2 cut(s) 705, 1175
BisI GCNGC 8 cut(s) 154, 157, 160, 163, 166, 407, 712, 723
BlsI GCNGC 8 cut(s) 155, 158, 161, 164, 167, 408, 713, 724
Bme1390I CCNGG 5 cut(s) 273, 705, 706, 814, 985
Bme18I GGWCC 1 cut(s) 667
BmeT110I CYCGRG 3 cut(s) 430, 704, 989
BmgBI CACGTC 1 cut(s) 693
BmgT120I GGNCC 4 cut(s) 667, 970, 981, 1080
BmiI GGNNCC 2 cut(s) 616, 948
BmrFI CCNGG 5 cut(s) 273, 705, 706, 814, 985
BmsI GCATC 1 cut(s) 8
BpiI GAAGAC 2 cut(s) 582, 1103
Bpu10I CCTNAGC 1 cut(s) 527
BpuMI CCSGG 4 cut(s) 273, 705, 706, 814
BsaAI YACGTR 2 cut(s) 540, 1053
BsaJI CCNNGG 8 cut(s) 272, 346, 567, 704, 803, 983, 1012, 1083
BsaWI WCCGGW 2 cut(s) 329, 628
Bsc4I CCNNNNNNNGG 5 cut(s) 329, 446, 710, 794, 1084
Bse118I RCCGGY 2 cut(s) 1023, 1077
Bse1I ACTGG 2 cut(s) 616, 736
Bse3DI GCAATG 1 cut(s) 1117
BseAI TCCGGA 1 cut(s) 329
BseBI CCWGG 1 cut(s) 985
BseDI CCNNGG 8 cut(s) 272, 346, 567, 704, 803, 983, 1012, 1083
BseGI GGATG 2 cut(s) 199, 1008
BseLI CCNNNNNNNGG 5 cut(s) 329, 446, 710, 794, 1084
BseMI GCAATG 1 cut(s) 1117
BseMII CTCAG 2 cut(s) 186, 541
BseNI ACTGG 2 cut(s) 616, 736
BseRI GAGGAG 2 cut(s) 103, 160
BseSI GKGCMC 1 cut(s) 1058
BseXI GCAGC 6 cut(s) 165, 168, 171, 174, 177, 418
Bsh1236I CGCG 2 cut(s) 722, 727
BshFI GGCC 5 cut(s) 735, 972, 982, 995, 1081
BshNI GGYRCC 1 cut(s) 614
BsiHKCI CYCGRG 3 cut(s) 430, 704, 989
BsiSI CCGG 9 cut(s) 272, 330, 629, 685, 705, 814, 926, 1024, 1078
BslFI GGGAC 2 cut(s) 710, 924
BslI CCNNNNNNNGG 5 cut(s) 329, 446, 710, 794, 1084
BsmAI GTCTC 1 cut(s) 1082
BsmFI GGGAC 2 cut(s) 710, 924
BsmI GAATGC 1 cut(s) 1165
BsnI GGCC 5 cut(s) 735, 972, 982, 995, 1081
BsoBI CYCGRG 3 cut(s) 430, 704, 989
Bsp1286I GDGCHC 2 cut(s) 437, 1058
Bsp13I TCCGGA 1 cut(s) 329
Bsp143I GATC 3 cut(s) 378, 385, 676
BspACI CCGC 5 cut(s) 362, 404, 531, 711, 722
BspANI GGCC 5 cut(s) 735, 972, 982, 995, 1081
BspCNI CTCAG 2 cut(s) 185, 540
BspEI TCCGGA 1 cut(s) 329
BspFNI CGCG 2 cut(s) 722, 727
BspLI GGNNCC 2 cut(s) 616, 948
BspMI ACCTGC 2 cut(s) 705, 1175
BspPI GGATC 2 cut(s) 380, 386
BspT107I GGYRCC 1 cut(s) 614
BsrDI GCAATG 1 cut(s) 1117
BsrFI RCCGGY 2 cut(s) 1023, 1077
BsrI ACTGG 2 cut(s) 616, 736
BssAI RCCGGY 2 cut(s) 1023, 1077
BssECI CCNNGG 8 cut(s) 272, 346, 567, 704, 803, 983, 1012, 1083
BssMI GATC 3 cut(s) 378, 385, 676
BssT1I CCWWGG 5 cut(s) 346, 567, 803, 1012, 1083
Bst2UI CCWGG 1 cut(s) 985
Bst4CI ACNGT 4 cut(s) 258, 547, 829, 961
Bst6I CTCTTC 1 cut(s) 128
BstBAI YACGTR 2 cut(s) 540, 1053
BstC8I GCNNGC 9 cut(s) 66, 151, 185, 212, 251, 485, 523, 846, 1025
BstDEI CTNAG 2 cut(s) 172, 527
BstENI CCTNNNNNAGG 1 cut(s) 792
BstF5I GGATG 2 cut(s) 199, 1008
BstFNI CGCG 2 cut(s) 722, 727
BstH2I RGCGCY 1 cut(s) 813
BstHHI GCGC 3 cut(s) 722, 727, 812
BstKTI GATC 3 cut(s) 381, 388, 679
BstMAI GTCTC 1 cut(s) 1082
BstMBI GATC 3 cut(s) 378, 385, 676
BstMWI GCNNNNNNNGC 8 cut(s) 159, 162, 165, 207, 717, 818, 1062, 1119
BstNI CCWGG 1 cut(s) 985
BstNSI RCATGY 2 cut(s) 603, 703
BstSCI CCNGG 5 cut(s) 271, 703, 704, 812, 983
BstSLI GKGCMC 1 cut(s) 1058
BstSNI TACGTA 1 cut(s) 540
BstUI CGCG 2 cut(s) 722, 727
BstV1I GCAGC 6 cut(s) 165, 168, 171, 174, 177, 418
BstV2I GAAGAC 2 cut(s) 582, 1103
BstXI CCANNNNNNTGG 1 cut(s) 829
BsuRI GGCC 5 cut(s) 735, 972, 982, 995, 1081
BtrI CACGTC 1 cut(s) 693
BtsCI GGATG 2 cut(s) 199, 1008
BtsIMutI CAGTG 2 cut(s) 743, 957
BveI ACCTGC 2 cut(s) 705, 1175
Cac8I GCNNGC 9 cut(s) 66, 151, 185, 212, 251, 485, 523, 846, 1025
CfoI GCGC 3 cut(s) 722, 727, 812
Cfr10I RCCGGY 2 cut(s) 1023, 1077
Cfr13I GGNCC 4 cut(s) 667, 970, 981, 1080
Cfr9I CCCGGG 1 cut(s) 704
CseI GACGC 2 cut(s) 427, 921
Csp6I GTAC 6 cut(s) 264, 502, 541, 615, 646, 1075
CviAII CATG 6 cut(s) 11, 261, 600, 700, 1127, 1194
CviQI GTAC 6 cut(s) 264, 502, 541, 615, 646, 1075
DdeI CTNAG 2 cut(s) 172, 527
DpnI GATC 3 cut(s) 380, 387, 678
DpnII GATC 3 cut(s) 378, 385, 676
DraIII CACNNNGTG 1 cut(s) 451
EaeI YGGCCR 1 cut(s) 733
Eam1104I CTCTTC 1 cut(s) 128
EarI CTCTTC 1 cut(s) 128
Eco105I TACGTA 1 cut(s) 540
Eco130I CCWWGG 5 cut(s) 346, 567, 803, 1012, 1083
Eco147I AGGCCT 1 cut(s) 995
Eco24I GRGCYC 1 cut(s) 437
Eco47I GGWCC 1 cut(s) 667
Eco72I CACGTG 1 cut(s) 1053
Eco88I CYCGRG 3 cut(s) 430, 704, 989
EcoNI CCTNNNNNAGG 1 cut(s) 792
EcoRI GAATTC 3 cut(s) 411, 798, 1183
EcoRII CCWGG 1 cut(s) 983
EcoT14I CCWWGG 5 cut(s) 346, 567, 803, 1012, 1083
EcoT38I GRGCYC 1 cut(s) 437
ErhI CCWWGG 5 cut(s) 346, 567, 803, 1012, 1083
FaeI CATG 6 cut(s) 14, 264, 603, 703, 1130, 1197
FaqI GGGAC 2 cut(s) 710, 924
FatI CATG 6 cut(s) 10, 260, 599, 699, 1126, 1193
FauI CCCGC 1 cut(s) 411
FbaI TGATCA 1 cut(s) 676
Fnu4HI GCNGC 8 cut(s) 154, 157, 160, 163, 166, 407, 712, 723
FokI GGATG 2 cut(s) 206, 995
FriOI GRGCYC 1 cut(s) 437
Fsp4HI GCNGC 8 cut(s) 154, 157, 160, 163, 166, 407, 712, 723
GlaI GCGC 3 cut(s) 721, 726, 811
GluI GCNGC 8 cut(s) 154, 157, 160, 163, 166, 407, 712, 723
HaeII RGCGCY 1 cut(s) 813
HaeIII GGCC 5 cut(s) 735, 972, 982, 995, 1081
HapII CCGG 9 cut(s) 272, 330, 629, 685, 705, 814, 926, 1024, 1078
HgaI GACGC 2 cut(s) 427, 921
HhaI GCGC 3 cut(s) 722, 727, 812
Hin1II CATG 6 cut(s) 14, 264, 603, 703, 1130, 1197
Hin6I GCGC 3 cut(s) 720, 725, 810
HinP1I GCGC 3 cut(s) 720, 725, 810
HpaII CCGG 9 cut(s) 272, 330, 629, 685, 705, 814, 926, 1024, 1078
HphI GGTGA 3 cut(s) 289, 583, 755
Hpy166II GTNNAC 1 cut(s) 543
Hpy188I TCNGA 4 cut(s) 175, 417, 667, 1072
Hpy188III TCNNGA 3 cut(s) 235, 330, 748
Hpy8I GTNNAC 1 cut(s) 543
Hpy99I CGWCG 3 cut(s) 653, 667, 1046
HpyAV CCTTC 3 cut(s) 241, 475, 794
HpyCH4III ACNGT 4 cut(s) 258, 547, 829, 961
HpyCH4IV ACGT 4 cut(s) 470, 539, 692, 1052
HpyCH4V TGCA 6 cut(s) 4, 149, 187, 603, 858, 1137
HpyF10VI GCNNNNNNNGC 8 cut(s) 159, 162, 165, 207, 717, 818, 1062, 1119
HpyF3I CTNAG 2 cut(s) 172, 527
HpySE526I ACGT 4 cut(s) 470, 539, 692, 1052
Hsp92II CATG 6 cut(s) 14, 264, 603, 703, 1130, 1197
HspAI GCGC 3 cut(s) 720, 725, 810
Kpn2I TCCGGA 1 cut(s) 329
KpnI GGTACC 1 cut(s) 618
KroI GCCGGC 1 cut(s) 1023
KroNI GCCGGC 1 cut(s) 1025
Ksp22I TGATCA 1 cut(s) 676
Kzo9I GATC 3 cut(s) 378, 385, 676
LmnI GCTCC 3 cut(s) 173, 807, 952
Lsp1109I GCAGC 6 cut(s) 165, 168, 171, 174, 177, 418
LweI GCATC 1 cut(s) 8
MaeII ACGT 4 cut(s) 470, 539, 692, 1052
MaeIII GTNAC 3 cut(s) 290, 451, 761
MalI GATC 3 cut(s) 380, 387, 678
MboI GATC 3 cut(s) 378, 385, 676
MboII GAAGA 6 cut(s) 100, 115, 118, 466, 582, 1108
MfeI CAATTG 3 cut(s) 57, 478, 516
MhlI GDGCHC 2 cut(s) 437, 1058
MlsI TGGCCA 1 cut(s) 735
MluNI TGGCCA 1 cut(s) 735
MmeI TCCRAC 3 cut(s) 645, 817, 1050
Mox20I TGGCCA 1 cut(s) 735
MroI TCCGGA 1 cut(s) 329
MroNI GCCGGC 1 cut(s) 1023
MroXI GAANNNNTTC 2 cut(s) 95, 1149
MscI TGGCCA 1 cut(s) 735
MseI TTAA 2 cut(s) 222, 933
MslI CAYNNNNRTG 2 cut(s) 259, 827
Msp20I TGGCCA 1 cut(s) 735
MspA1I CMGCKG 1 cut(s) 531
MspI CCGG 9 cut(s) 272, 330, 629, 685, 705, 814, 926, 1024, 1078
MspR9I CCNGG 5 cut(s) 273, 705, 706, 814, 985
MteI GCGCNGCGC 1 cut(s) 723
MunI CAATTG 3 cut(s) 57, 478, 516
Mva1269I GAATGC 1 cut(s) 1165
MvaI CCWGG 1 cut(s) 985
MvnI CGCG 2 cut(s) 722, 727
MwoI GCNNNNNNNGC 8 cut(s) 159, 162, 165, 207, 717, 818, 1062, 1119
NaeI GCCGGC 1 cut(s) 1025
NciI CCSGG 4 cut(s) 273, 705, 706, 814
NdeII GATC 3 cut(s) 378, 385, 676
NgoMIV GCCGGC 1 cut(s) 1023
NlaIII CATG 6 cut(s) 14, 264, 603, 703, 1130, 1197
NlaIV GGNNCC 2 cut(s) 616, 948
NmuCI GTSAC 3 cut(s) 290, 451, 761
NspI RCATGY 2 cut(s) 603, 703
PaeR7I CTCGAG 1 cut(s) 989
PaqCI CACCTGC 1 cut(s) 705
PceI AGGCCT 1 cut(s) 995
PctI GAATGC 1 cut(s) 1165
PdiI GCCGGC 1 cut(s) 1025
PdmI GAANNNNTTC 2 cut(s) 95, 1149
PkrI GCNGC 8 cut(s) 155, 158, 161, 164, 167, 408, 713, 724
PmaCI CACGTG 1 cut(s) 1053
PmlI CACGTG 1 cut(s) 1053
Ppu21I YACGTR 2 cut(s) 540, 1053
Psp6I CCWGG 1 cut(s) 983
PspCI CACGTG 1 cut(s) 1053
PspGI CCWGG 1 cut(s) 983
PspN4I GGNNCC 2 cut(s) 616, 948
PspPI GGNCC 4 cut(s) 667, 970, 981, 1080
PspXI VCTCGAGB 1 cut(s) 989
RsaI GTAC 6 cut(s) 265, 503, 542, 616, 647, 1076
RsaNI GTAC 6 cut(s) 264, 502, 541, 615, 646, 1075
RseI CAYNNNNRTG 2 cut(s) 259, 827
SaqAI TTAA 2 cut(s) 222, 933
SatI GCNGC 8 cut(s) 154, 157, 160, 163, 166, 407, 712, 723
Sau3AI GATC 3 cut(s) 378, 385, 676
Sau96I GGNCC 4 cut(s) 667, 970, 981, 1080
ScrFI CCNGG 5 cut(s) 273, 705, 706, 814, 985
SduI GDGCHC 2 cut(s) 437, 1058
SfaNI GCATC 1 cut(s) 8
Sfr274I CTCGAG 1 cut(s) 989
SinI GGWCC 1 cut(s) 667
SlaI CTCGAG 1 cut(s) 989
SmaI CCCGGG 1 cut(s) 706
SmiMI CAYNNNNRTG 2 cut(s) 259, 827
SmlI CTYRAG 1 cut(s) 989
SmoI CTYRAG 1 cut(s) 989
SnaBI TACGTA 1 cut(s) 540
SseBI AGGCCT 1 cut(s) 995
SsiI CCGC 5 cut(s) 362, 404, 531, 711, 722
SspI AATATT 1 cut(s) 94
StuI AGGCCT 1 cut(s) 995
StyD4I CCNGG 5 cut(s) 271, 703, 704, 812, 983
StyI CCWWGG 5 cut(s) 346, 567, 803, 1012, 1083
TaaI ACNGT 4 cut(s) 258, 547, 829, 961
TaiI ACGT 4 cut(s) 473, 542, 695, 1055
TaqI TCGA 3 cut(s) 607, 975, 990
TatI WGTACW 2 cut(s) 263, 501
TauI GCSGC 2 cut(s) 714, 725
Tru1I TTAA 2 cut(s) 222, 933
Tru9I TTAA 2 cut(s) 222, 933
TscAI CASTG 2 cut(s) 743, 964
TseFI GTSAC 3 cut(s) 290, 451, 761
TseI GCWGC 6 cut(s) 153, 156, 159, 162, 165, 406
Tsp45I GTSAC 3 cut(s) 290, 451, 761
TspDTI ATGAA 4 cut(s) 88, 104, 1158, 1172
TspGWI ACGGA 1 cut(s) 630
TspMI CCCGGG 1 cut(s) 704
TspRI CASTG 2 cut(s) 743, 964
VpaK11BI GGWCC 1 cut(s) 667
XagI CCTNNNNNAGG 1 cut(s) 792
XapI RAATTY 5 cut(s) 224, 411, 798, 929, 1183
XceI RCATGY 2 cut(s) 603, 703
XcmI CCANNNNNNNNNTGG 1 cut(s) 964
XhoI CTCGAG 1 cut(s) 989
XmaI CCCGGG 1 cut(s) 704
XmnI GAANNNNTTC 2 cut(s) 95, 1149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.