Prupe.2G314100_v2.0.a1

acyl-CoA-binding domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0007027
Physical Location & Seq
Reverse (-)
29561218 .. 29564339
3122 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G314100.2

Sequence Viewer

Length: 1056 bp
ATGGGCGAGTGGCAACAGCTCCTCCAGTCGATATTCCTAGGCCTCATTTTCTCTTACCTCCTCGCCAAGCTCATCGCCATAGTCATCTCCTTCAAAGAAGACAATCTCAGCATCACTCGCGCGCACACTACTCCCACCGACATCAATCTACCCCGTCCCAAACCCCAACCCCATGACGATCCTCCTCGCTCAGCCGATTTGACCTCCGCAGCAATCGAGGCCGAATCGGTCGTCGCAGAGCATGGCAGTGTCAGGAACGAGAGCAGCGAAGCTGGAAGTGATGATGACTGGGAAGGCGTGGAGAGTACAGAATTGGACGAACTGTTCAGCGCAGCGACAGCGTTTGTTGCATCAGCCGCGACGGATCGCCAGAAGGTATCGAACGATGCGCAGTTGCAGCTCTATGGGCTTTACAAGATTGCTACTGAGGGTCCCTGTAGCGTGCCGCAGCCATCGGCTCTGAAAATGACAGCTCGCGCCAAGTGGCAAGCATGGCAGAAATTGGGTGCTATGCCTCCTGAAGATGCCATGGAGAAGTACATTGATATTGTTACGGAGCTATATCCTACTTGGGCAGCAGGTTTGACTGTGAAGAGCAGAGGCGGAGATGGTAATGCACCTGGTACAGATTCTAACGGACCAATGGGGCCAGTTTTCAGCACCTTTGTTTACGAGGAGGAATCTGAAAATGATTCCAAGATGGATGCCATTCATGCCTTTGCCAGAGAAGGAGAAGTGGATAATCTGCTTAAATGCATTGAAAGCGGTGTTTCAGTAGATCTGAAGGATAGTGAGGGAAGGACCCCATTGCATTGGGCTGTGGATCGTGGCCATCTGAACATGGCAGAGCTACTTGTTAGCAAAAATGCCAATGTTAATGCAAAGGACAATGATGGCCAAACCGCACTGCATTATGCGGTTATGTGTGATAGAGAAGGCGTTGCTGAATATCTTGTGAAGCAAAATGCAGACACAGGTGCAAAAGACAATGATGGCAGCTCTCCGTGTGATCTCTGCGAGTCAAACTGGCCTTGGTTGCAGCGTGCAAAGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000062 GO:0000166 GO:0001101 GO:0001666 GO:0003006 GO:0003674 GO:0005488 GO:0005543 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005778 GO:0005783 GO:0005789 GO:0005886 GO:0006629 GO:0006810 GO:0006869 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009266 GO:0009409 GO:0009505 GO:0009514 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009791 GO:0010029 GO:0010033 GO:0010035 GO:0010038 GO:0010154 GO:0010162 GO:0010288 GO:0010431 GO:0010876 GO:0012505 GO:0016020 GO:0017076 GO:0021700 GO:0022414 GO:0022611 GO:0030312 GO:0030554 GO:0031090 GO:0031903 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0032553 GO:0032555 GO:0032559 GO:0032791 GO:0033036 GO:0033218 GO:0033993 GO:0036094 GO:0036293 GO:0042175 GO:0042221 GO:0042579 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0048037 GO:0048316 GO:0048580 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050662 GO:0050789 GO:0050793 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0061458 GO:0065007 GO:0070300 GO:0070482 GO:0071695 GO:0071702 GO:0071704 GO:0071944 GO:0097159 GO:0097305 GO:0097367 GO:0098588 GO:0098805 GO:0098827 GO:1900140 GO:1901265 GO:1901363 GO:1901567 GO:1901681 GO:1901700 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ACBP Ank_2 Ank_4 Ank_5

Protein Analysis

352

Amino Acids

38.25

Weight (kDa)

4.57

Isoelectric Point (pI)

35.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 390
Acc36I ACCTGC 1 cut(s) 569
AccII CGCG 4 cut(s) 120, 122, 359, 477
AciI CCGC 7 cut(s) 207, 357, 446, 603, 765, 903, 917
AclWI GGATC 3 cut(s) 173, 372, 831
AcoI YGGCCR 2 cut(s) 829, 895
AcuI CTGAAG 2 cut(s) 540, 803
AfaI GTAC 3 cut(s) 307, 539, 625
AgsI TTSAA 2 cut(s) 94, 761
AjnI CCWGG 1 cut(s) 619
AloI GAACNNNNNNTCC 2 cut(s) 308, 340
AluBI AGCT 8 cut(s) 19, 70, 272, 400, 473, 559, 850, 999
AluI AGCT 8 cut(s) 19, 70, 272, 400, 473, 559, 850, 999
AlwI GGATC 3 cut(s) 173, 372, 831
AoxI GGCC 6 cut(s) 40, 219, 647, 829, 895, 1028
ApeKI GCWGC 8 cut(s) 209, 264, 332, 397, 448, 575, 996, 1039
ArsI GACNNNNNNTTYG 2 cut(s) 216, 248
AspA2I CCTAGG 1 cut(s) 37
AspLEI GCGC 5 cut(s) 122, 124, 332, 391, 479
AspS9I GGNCC 4 cut(s) 431, 638, 647, 801
AvaII GGWCC 3 cut(s) 431, 638, 801
AvrII CCTAGG 1 cut(s) 37
BalI TGGCCA 2 cut(s) 831, 897
BbsI GAAGAC 1 cut(s) 105
BbvI GCAGC 8 cut(s) 221, 276, 344, 409, 460, 587, 1008, 1051
BccI CCATC 6 cut(s) 460, 602, 694, 840, 887, 986
BciT130I CCWGG 1 cut(s) 621
BfaI CTAG 1 cut(s) 38
BfmI CTRYAG 1 cut(s) 436
BfuAI ACCTGC 1 cut(s) 569
BglII AGATCT 1 cut(s) 778
BlnI CCTAGG 1 cut(s) 37
BlpI GCTNAGC 1 cut(s) 190
Bme1390I CCNGG 1 cut(s) 621
Bme18I GGWCC 3 cut(s) 431, 638, 801
BmgT120I GGNCC 4 cut(s) 431, 638, 647, 801
BmiI GGNNCC 4 cut(s) 432, 433, 648, 803
BmrFI CCNGG 1 cut(s) 621
BmrI ACTGGG 1 cut(s) 298
BmsI GCATC 5 cut(s) 120, 359, 376, 514, 694
BmuI ACTGGG 1 cut(s) 298
BpiI GAAGAC 1 cut(s) 105
BpmI CTGGAG 1 cut(s) 8
Bpu1102I GCTNAGC 1 cut(s) 190
BsaJI CCNNGG 3 cut(s) 37, 528, 1031
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bse1I ACTGG 4 cut(s) 25, 293, 650, 1031
Bse3DI GCAATG 1 cut(s) 806
BseBI CCWGG 1 cut(s) 621
BseDI CCNNGG 3 cut(s) 37, 528, 1031
BseGI GGATG 1 cut(s) 709
BseMI GCAATG 1 cut(s) 806
BseMII CTCAG 3 cut(s) 121, 204, 417
BseNI ACTGG 4 cut(s) 25, 293, 650, 1031
BsePI GCGCGC 1 cut(s) 120
BseRI GAGGAG 4 cut(s) 11, 50, 174, 689
BseXI GCAGC 8 cut(s) 221, 276, 344, 409, 460, 587, 1008, 1051
Bsh1236I CGCG 4 cut(s) 120, 122, 359, 477
Bsh1285I CGRYCG 1 cut(s) 231
BshFI GGCC 6 cut(s) 42, 221, 649, 831, 897, 1030
BsiEI CGRYCG 1 cut(s) 231
BslFI GGGAC 2 cut(s) 141, 417
BsmFI GGGAC 2 cut(s) 141, 417
BsnI GGCC 6 cut(s) 42, 221, 649, 831, 897, 1030
Bsp143I GATC 5 cut(s) 178, 364, 778, 823, 1009
Bsp1720I GCTNAGC 1 cut(s) 190
Bsp19I CCATGG 1 cut(s) 528
BspACI CCGC 7 cut(s) 207, 357, 446, 603, 765, 903, 917
BspANI GGCC 6 cut(s) 42, 221, 649, 831, 897, 1030
BspCNI CTCAG 3 cut(s) 120, 203, 418
BspFNI CGCG 4 cut(s) 120, 122, 359, 477
BspLI GGNNCC 4 cut(s) 432, 433, 648, 803
BspMI ACCTGC 1 cut(s) 569
BspPI GGATC 3 cut(s) 173, 372, 831
BspQI GCTCTTC 1 cut(s) 587
BsrDI GCAATG 1 cut(s) 806
BsrI ACTGG 4 cut(s) 25, 293, 650, 1031
BssECI CCNNGG 3 cut(s) 37, 528, 1031
BssHII GCGCGC 1 cut(s) 120
BssMI GATC 5 cut(s) 178, 364, 778, 823, 1009
BssT1I CCWWGG 3 cut(s) 37, 528, 1031
Bst2UI CCWGG 1 cut(s) 621
Bst4CI ACNGT 2 cut(s) 324, 589
Bst6I CTCTTC 1 cut(s) 587
BstC8I GCNNGC 5 cut(s) 122, 443, 475, 489, 1044
BstDEI CTNAG 3 cut(s) 107, 190, 426
BstDSI CCRYGG 1 cut(s) 528
BstF5I GGATG 1 cut(s) 709
BstFNI CGCG 4 cut(s) 120, 122, 359, 477
BstHHI GCGC 5 cut(s) 122, 124, 332, 391, 479
BstKTI GATC 5 cut(s) 181, 367, 781, 826, 1012
BstMBI GATC 5 cut(s) 178, 364, 778, 823, 1009
BstMCI CGRYCG 1 cut(s) 231
BstNI CCWGG 1 cut(s) 621
BstSCI CCNGG 1 cut(s) 619
BstSFI CTRYAG 1 cut(s) 436
BstUI CGCG 4 cut(s) 120, 122, 359, 477
BstV1I GCAGC 8 cut(s) 221, 276, 344, 409, 460, 587, 1008, 1051
BstV2I GAAGAC 1 cut(s) 105
BstX2I RGATCY 1 cut(s) 778
BstXI CCANNNNNNTGG 1 cut(s) 813
BstYI RGATCY 1 cut(s) 778
BsuRI GGCC 6 cut(s) 42, 221, 649, 831, 897, 1030
BtgI CCRYGG 1 cut(s) 528
BtgZI GCGATG 1 cut(s) 58
BtsCI GGATG 1 cut(s) 709
BtsI GCAGTG 2 cut(s) 253, 905
BtsIMutI CAGTG 2 cut(s) 253, 905
BveI ACCTGC 1 cut(s) 569
Cac8I GCNNGC 5 cut(s) 122, 443, 475, 489, 1044
CfoI GCGC 5 cut(s) 122, 124, 332, 391, 479
Cfr13I GGNCC 4 cut(s) 431, 638, 647, 801
CsiI ACCWGGT 1 cut(s) 619
Csp6I GTAC 3 cut(s) 306, 538, 624
CviAII CATG 6 cut(s) 173, 242, 492, 529, 713, 841
CviQI GTAC 3 cut(s) 306, 538, 624
DdeI CTNAG 3 cut(s) 107, 190, 426
DpnI GATC 5 cut(s) 180, 366, 780, 825, 1011
DpnII GATC 5 cut(s) 178, 364, 778, 823, 1009
EaeI YGGCCR 2 cut(s) 829, 895
Eam1104I CTCTTC 1 cut(s) 587
EarI CTCTTC 1 cut(s) 587
EciI GGCGGA 1 cut(s) 618
Eco130I CCWWGG 3 cut(s) 37, 528, 1031
Eco147I AGGCCT 1 cut(s) 42
Eco47I GGWCC 3 cut(s) 431, 638, 801
Eco57I CTGAAG 2 cut(s) 540, 803
EcoO109I RGGNCCY 2 cut(s) 431, 801
EcoRII CCWGG 1 cut(s) 619
EcoT14I CCWWGG 3 cut(s) 37, 528, 1031
EcoT22I ATGCAT 1 cut(s) 758
ErhI CCWWGG 3 cut(s) 37, 528, 1031
FaeI CATG 6 cut(s) 176, 245, 495, 532, 716, 844
FaqI GGGAC 2 cut(s) 141, 417
FatI CATG 6 cut(s) 172, 241, 491, 528, 712, 840
FokI GGATG 1 cut(s) 716
FspBI CTAG 1 cut(s) 38
FspI TGCGCA 1 cut(s) 390
GlaI GCGC 5 cut(s) 121, 123, 331, 390, 478
GsuI CTGGAG 1 cut(s) 8
HaeIII GGCC 6 cut(s) 42, 221, 649, 831, 897, 1030
HhaI GCGC 5 cut(s) 122, 124, 332, 391, 479
Hin1II CATG 6 cut(s) 176, 245, 495, 532, 716, 844
Hin6I GCGC 5 cut(s) 120, 122, 330, 389, 477
HinP1I GCGC 5 cut(s) 120, 122, 330, 389, 477
HinfI GANTC 5 cut(s) 224, 629, 680, 692, 1019
Hpy166II GTNNAC 1 cut(s) 670
Hpy188I TCNGA 4 cut(s) 462, 685, 783, 837
Hpy188III TCNNGA 2 cut(s) 253, 518
Hpy8I GTNNAC 1 cut(s) 670
Hpy99I CGWCG 2 cut(s) 236, 364
HpyAV CCTTC 7 cut(s) 100, 287, 367, 722, 778, 792, 929
HpyCH4III ACNGT 2 cut(s) 324, 589
HpyF3I CTNAG 3 cut(s) 107, 190, 426
Hsp92II CATG 6 cut(s) 176, 245, 495, 532, 716, 844
HspAI GCGC 5 cut(s) 120, 122, 330, 389, 477
KflI GGGWCCC 1 cut(s) 431
Kzo9I GATC 5 cut(s) 178, 364, 778, 823, 1009
LguI GCTCTTC 1 cut(s) 587
LmnI GCTCC 2 cut(s) 24, 556
Lsp1109I GCAGC 8 cut(s) 221, 276, 344, 409, 460, 587, 1008, 1051
LweI GCATC 5 cut(s) 120, 359, 376, 514, 694
MabI ACCWGGT 1 cut(s) 619
MaeI CTAG 1 cut(s) 38
MaeIII GTNAC 1 cut(s) 550
MalI GATC 5 cut(s) 180, 366, 780, 825, 1011
MboI GATC 5 cut(s) 178, 364, 778, 823, 1009
MboII GAAGA 3 cut(s) 110, 533, 604
MflI RGATCY 1 cut(s) 778
MlsI TGGCCA 2 cut(s) 831, 897
MluCI AATT 2 cut(s) 311, 500
MluNI TGGCCA 2 cut(s) 831, 897
MlyI GAGTC 1 cut(s) 1028
Mox20I TGGCCA 2 cut(s) 831, 897
Mph1103I ATGCAT 1 cut(s) 758
MscI TGGCCA 2 cut(s) 831, 897
MseI TTAA 2 cut(s) 750, 876
MslI CAYNNNNRTG 1 cut(s) 246
Msp20I TGGCCA 2 cut(s) 831, 897
MspR9I CCNGG 1 cut(s) 621
MvaI CCWGG 1 cut(s) 621
MvnI CGCG 4 cut(s) 120, 122, 359, 477
NcoI CCATGG 1 cut(s) 528
NdeII GATC 5 cut(s) 178, 364, 778, 823, 1009
NlaIII CATG 6 cut(s) 176, 245, 495, 532, 716, 844
NlaIV GGNNCC 4 cut(s) 432, 433, 648, 803
NsbI TGCGCA 1 cut(s) 390
NsiI ATGCAT 1 cut(s) 758
PauI GCGCGC 1 cut(s) 120
PceI AGGCCT 1 cut(s) 42
PciSI GCTCTTC 1 cut(s) 587
PcsI WCGNNNNNNNCGW 1 cut(s) 264
PfeI GAWTC 4 cut(s) 224, 629, 680, 692
PleI GAGTC 1 cut(s) 1027
PpsI GAGTC 1 cut(s) 1027
PpuMI RGGWCCY 2 cut(s) 431, 801
Psp5II RGGWCCY 2 cut(s) 431, 801
Psp6I CCWGG 1 cut(s) 619
PspGI CCWGG 1 cut(s) 619
PspN4I GGNNCC 4 cut(s) 432, 433, 648, 803
PspPI GGNCC 4 cut(s) 431, 638, 647, 801
PspPPI RGGWCCY 2 cut(s) 431, 801
PsuI RGATCY 1 cut(s) 778
PteI GCGCGC 1 cut(s) 120
RsaI GTAC 3 cut(s) 307, 539, 625
RsaNI GTAC 3 cut(s) 306, 538, 624
RseI CAYNNNNRTG 1 cut(s) 246
SapI GCTCTTC 1 cut(s) 587
SaqAI TTAA 2 cut(s) 750, 876
Sau3AI GATC 5 cut(s) 178, 364, 778, 823, 1009
Sau96I GGNCC 4 cut(s) 431, 638, 647, 801
SchI GAGTC 1 cut(s) 1028
ScrFI CCNGG 1 cut(s) 621
SexAI ACCWGGT 1 cut(s) 619
SfaNI GCATC 5 cut(s) 120, 359, 376, 514, 694
SfcI CTRYAG 1 cut(s) 436
SinI GGWCC 3 cut(s) 431, 638, 801
SmiMI CAYNNNNRTG 1 cut(s) 246
Sse9I AATT 2 cut(s) 311, 500
SseBI AGGCCT 1 cut(s) 42
SsiI CCGC 7 cut(s) 207, 357, 446, 603, 765, 903, 917
SspMI CTAG 1 cut(s) 38
StuI AGGCCT 1 cut(s) 42
StyD4I CCNGG 1 cut(s) 619
StyI CCWWGG 3 cut(s) 37, 528, 1031
TaaI ACNGT 2 cut(s) 324, 589
TaqI TCGA 3 cut(s) 29, 216, 380
TaqII GACCGA 1 cut(s) 217
TasI AATT 2 cut(s) 311, 500
TatI WGTACW 2 cut(s) 305, 537
TauI GCSGC 2 cut(s) 359, 448
TfiI GAWTC 4 cut(s) 224, 629, 680, 692
Tru1I TTAA 2 cut(s) 750, 876
Tru9I TTAA 2 cut(s) 750, 876
TscAI CASTG 2 cut(s) 253, 912
TseI GCWGC 8 cut(s) 209, 264, 332, 397, 448, 575, 996, 1039
TspDTI ATGAA 1 cut(s) 701
TspGWI ACGGA 4 cut(s) 377, 569, 651, 993
TspRI CASTG 2 cut(s) 253, 912
VpaK11BI GGWCC 3 cut(s) 431, 638, 801
XmaJI CCTAGG 1 cut(s) 37
XspI CTAG 1 cut(s) 38
Zsp2I ATGCAT 1 cut(s) 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.