Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0010361

Physical Location & Seq

Genomic Coordinates Forward (+)

656903 .. 660530

Gene Structure 3628 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G010400.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2607 bp

ATGGCTTCAACGCCTCCACACTGTTCAATCACAGCGACAAAGCCGTATCAAACCCACCGATACCCACAAAACCAGCACCTGAAATCTCAGCGCCAGAGCCGCCAAAGCAATCAATGGACGAAGCAACAAGTTTCCCTCCCAAAGCCTTTGCCTTTACCATCCCAAGCACCACGCACTGCCGCAAAAACACCCACTGCCACACCCACTTCCTCCTTTTCCTCTCTCTGCCCTCTCCCTCATCCAAAATCCGATCTTGTCACCGCTTTTTCGGGCCGCCGCTCCACACGATTCGTCTCCAAAATGCACTTGGGCCGCCCCAAAACTACCATGGGATCCTACCGCTCTCCGCTCGCCGAGGAGGCCCTGCACCAAGCCGTCCAATTCGGTAATGACGATCTTGCTCTTGATGATATTTTGCTTAGTTTTCACTCCAGGCTTTGCGGGTCTGATGATTACACTTTTTTATTTCGAGAGCTTGGGAATAGAGGAGAGTGTTGGAAAGCGATTCGGTGCTTTGAGTTTGCAGTGAGGCGTGAGAAAAGGAGAACTGAGCAGGGGAAATTGGCTAGTTCTATGATTAGTACTCTTGGTAGGTTAGGAAAGGTTGAGCTTGCTAAGAATGTGTTTCAAACGGCTGTTAATGAGGGGTATGGAAAGACTGTTTATACGTATTCAGCGTTGATTACCGCTTATGGGCGAAATGGGTATTGTGAGGAGGCTATCAGAGTGTTTGAGTCGATGAAAGATTCGGGCTTGAAGCCGAATTTGGTTACTTACAATGCAGTGATTGATGCGTATGGAAAAGGGGGAGTGGAGTTTAAGAGGGTAGTGGAGATTTTCAATGAGATGCTGAGAAATGGGGAGCAACCGGATCGAATCACTTATAATTCACTCCTAGCGGTTTGTAGTCGAGGCGGGCTGTGGGAGATGGCTCGAAACTTGTTTAGTGAAATGGTGGATAGAGGAATTGATCAGGATATTTATACGTATAATACCCTTATAGATGCGATTTGTAAAGGTGGGCAGATGGATTTGGCATATCAGATTATGTCCGAGATGCCTTCAAAAAATATTTTGCCCAATGTGGTCACTTATAGTACTATTATTGATGGGTATGCTAAGGCTGGTAGATTAGAAGATGCACTAAGTTTATTTAATGAAATGAAGTTTTTGGCCATTGGTCTGGATAGAGTTCTGTATAATACATTGCTTTCACTTTATGGGAAGCTTGGTAGGTTCGAAGATGCTTTGAAGGTTTGCAAGGAAATGGAAAGTGTTGGGATTGCCAAGGATGTTGTATCTTATAATGCACTTCTTGGTGGGTATGGGAAGCAAGGGAAGTATGATGACGCTAAAAGAATGTACAATCAGATGAAAGAAGAACGTGTATCACCAAACATATTAACTTATTCAACATTGATTGATGTGTATTCAAAAGGTGGTTTGTATATGGAGGCAATGAAGGTTTTTAGAGAGTTTAAGCAGGCAGGGCTGAAGGCTGATGTTGTGCTTTATAGTGAACTTGTCAATGCTTTGTGCAAAAATGGACTGGTGGAATCTGCTGTTTTGTTGCTTGATGAGATGACCAAGGAAGGGATTCGACCTAATGTTGTCACTTATAATTCAATAATTGATGCTTTTGGTCGGTCAGCAACAACAGAATGTGCAGCTGATGCTGCTGGTGGCGGCATTGTGCTACAGACAGAATCTTCATCTTCAGTTTCTGAAGGGGATGCCATTGGGATTCAGGTGGGAGATAGGGGGGATAACAGATTTATGAAGATGTTTGGGCAACTTGCTGCTGAGAAAGCAGGTTATGCAAAAACAGATAGGAAGGTTAGACAAGAAATCTTGTGCATTCTGGGCATCTTTCAGAAGATGCATGAGCTAGACATCAAACCAAACGTTGTCACATTTTCTGCCATTTTAAATGCCTGCAGCCGTTGTAATTCTTTTGAAGATGCTTCAATGTTATTGGAGGAACTCCGGTTGTTTGATAACAAAGTTTACGGTGTTGCCCACGGACTTCTCATGGGCTACAGGGATAATGTATGGGTTAAAGCTGAGTCTCTGTTTGATGAAGTTAAGCAGATGGACTCTTCAACTGCATCTGCGTTCTATAATGCTCTGACCGACATGCTATGGCACTACGGACAGAAACAAGGGGCGCAACTGGTTGTGCTTGAAGGGAAGCGCCGAAATGTATGGGAGAGTGTGTGGTCGAATTCATGCTTGGATTTGCATTTAATGTCTTCTGGGGCTGCCCGGGCAATGGTTCATGCATGGTTGCTCAATATACGCTCTATAGTGTTTGAAGGCCAACAACTGCCGAACCTGTTAAGCATTTTGACAGGGTGGGGCAAACATAGCAAAGTAGTAGGTGACAGCACCTTAAGACGAGCTATTGAGGCGCTTCTTACCAGCATGGGTGCACCCTTTCGGGTTGCCAAGTGTAACTTGGGTAGGTTTATATCAACGGGATCCATGGCTGCTGCCTGGTTAAGAGAATCCGGCACACTGGAGGTGCTTGTTCTTCACGATGACAGGACTTGCCCAAAAAGTGCAGATTTGGAGCAAACCTCCAATTTGCAAGCCCTCGCCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010019 GO:0016070 GO:0016787 GO:0016788 GO:0023052 GO:0031930 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 Smr

Protein Analysis

869

Amino Acids

96.46

Weight (kDa)

8.6

Isoelectric Point (pI)

42.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010361)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31400 AT2G31400
fragaria_vesca	FvH4_1g27040 FvH4_1g27040 FvH4_1g27040 FvH4_1g27040 FvH4_1g27040
malus_domestica	MD09G1284400.v1.1 MD17G1277600.v1.1
prunus_persica	Prupe.3G009900_v2.0.a1 Prupe.3G010400_v2.0.a1 Prupe.3G010400_v2.0.a1
pyrus_communis	pycom09g19230 pycom17g27520
rosa_chinensis	RchiOBHm_Chr3g0487361
rosa_laevigata	RLG00000023011
rosa_multiflora	Rmu_sc0001955.1_g000008
rosa_roxburghii	Rroxscaffold_6G00394850
rosa_rugosa	Rorug03G0233500
rosa_samantha	Rh3DG313000
rosa_wichuraiana	Rw3G024920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	885, 1305, 1620
Acc36I	ACCTGC	1 cut(s)	1802
AccBSI	CCGCTC	3 cut(s)	279, 342, 349
AclI	AACGTT	1 cut(s)	1905
AclWI	GGATC	5 cut(s)	327, 340, 879, 2475, 2488
AcoI	YGGCCR	1 cut(s)	1173
AcsI	RAATTY	2 cut(s)	763, 2224
AcuI	CTGAAG	3 cut(s)	1514, 1701, 1746
AfaI	GTAC	3 cut(s)	583, 1099, 1364
AfiI	CCNNNNNNNGG	3 cut(s)	693, 1593, 2272
AflII	CTTAAG	1 cut(s)	2392
AflIII	ACRYGT	1 cut(s)	1384
AjnI	CCWGG	2 cut(s)	431, 2495
AjuI	GAANNNNNNNTTGG	4 cut(s)	749, 781, 2216, 2248
AluBI	AGCT	7 cut(s)	475, 610, 1228, 1670, 1888, 2063, 2402
AluI	AGCT	7 cut(s)	475, 610, 1228, 1670, 1888, 2063, 2402
Alw21I	GWGCWC	1 cut(s)	2434
Alw26I	GTCTC	2 cut(s)	298, 2073
Alw44I	GTGCAC	1 cut(s)	2430
AlwI	GGATC	5 cut(s)	327, 340, 879, 2475, 2488
AlwNI	CAGNNNCTG	2 cut(s)	79, 1724
Ama87I	CYCGRG	1 cut(s)	2265
AoxI	GGCC	5 cut(s)	271, 310, 360, 1173, 2317
ApaLI	GTGCAC	1 cut(s)	2430
ApeKI	GCWGC	7 cut(s)	1667, 1676, 1799, 1938, 2261, 2489, 2492
ApoI	RAATTY	2 cut(s)	763, 2224
Asp700I	GAANNNNTTC	1 cut(s)	1596
AspLEI	GCGC	4 cut(s)	93, 2170, 2196, 2413
AspS9I	GGNCC	3 cut(s)	271, 310, 361
AsuC2I	CCSGG	2 cut(s)	2266, 2267
AsuHPI	GGTGA	3 cut(s)	250, 1383, 2393
AsuII	TTCGAA	1 cut(s)	1239
AvaI	CYCGRG	1 cut(s)	2265
BaeGI	GKGCMC	1 cut(s)	2434
BalI	TGGCCA	1 cut(s)	1175
BamHI	GGATCC	2 cut(s)	332, 2480
BbsI	GAAGAC	1 cut(s)	2244
Bbv12I	GWGCWC	1 cut(s)	2434
BbvI	GCAGC	7 cut(s)	1663, 1679, 1786, 1950, 2248, 2476, 2479
BccI	CCATC	5 cut(s)	166, 922, 1021, 1103, 2086
BceAI	ACGGC	4 cut(s)	28, 359, 648, 1926
BcgI	CGANNNNNNTGC	2 cut(s)	854, 888
BciT130I	CCWGG	2 cut(s)	433, 2497
BclI	TGATCA	1 cut(s)	970
BcnI	CCSGG	2 cut(s)	2266, 2267
BcoDI	GTCTC	2 cut(s)	298, 2073
BfaI	CTAG	3 cut(s)	567, 896, 1889
BfmI	CTRYAG	4 cut(s)	1697, 1936, 2038, 2304
BfoI	RGCGCY	3 cut(s)	94, 2197, 2414
BfrI	CTTAAG	1 cut(s)	2392
BfuAI	ACCTGC	1 cut(s)	1802
BglI	GCCNNNNNGGC	1 cut(s)	359
BmcAI	AGTACT	2 cut(s)	583, 1099
Bme1390I	CCNGG	4 cut(s)	433, 2266, 2267, 2497
BmeT110I	CYCGRG	1 cut(s)	2265
BmgT120I	GGNCC	3 cut(s)	271, 310, 361
BmiI	GGNNCC	2 cut(s)	334, 2482
BmrFI	CCNGG	4 cut(s)	433, 2266, 2267, 2497
BpiI	GAAGAC	1 cut(s)	2244
BplI	GAGNNNNNCTC	2 cut(s)	2564, 2596
BpmI	CTGGAG	2 cut(s)	415, 2540
Bpu10I	CCTNAGC	1 cut(s)	1119
Bpu14I	TTCGAA	1 cut(s)	1239
BpuMI	CCSGG	2 cut(s)	2266, 2267
BsaAI	YACGTR	2 cut(s)	669, 987
BsaJI	CCNNGG	7 cut(s)	327, 354, 1287, 1587, 2020, 2265, 2484
BsaWI	WCCGGW	2 cut(s)	868, 1986
BsaXI	ACNNNNNCTCC	2 cut(s)	2201, 2231
Bsc4I	CCNNNNNNNGG	3 cut(s)	693, 1593, 2272
Bse1I	ACTGG	3 cut(s)	1554, 2178, 2523
Bse3DI	GCAATG	3 cut(s)	1205, 1464, 2277
BseBI	CCWGG	2 cut(s)	433, 2497
BseDI	CCNNGG	7 cut(s)	327, 354, 1287, 1587, 2020, 2265, 2484
BseGI	GGATG	4 cut(s)	158, 238, 1297, 1738
BseLI	CCNNNNNNNGG	3 cut(s)	693, 1593, 2272
BseMI	GCAATG	3 cut(s)	1205, 1464, 2277
BseMII	CTCAG	5 cut(s)	101, 540, 842, 1794, 2055
BseNI	ACTGG	3 cut(s)	1554, 2178, 2523
BseRI	GAGGAG	3 cut(s)	371, 501, 728
BseSI	GKGCMC	1 cut(s)	2434
BseXI	GCAGC	7 cut(s)	1663, 1679, 1786, 1950, 2248, 2476, 2479
BsgI	GTGCAG	3 cut(s)	350, 1686, 2583
BshFI	GGCC	5 cut(s)	273, 312, 362, 1175, 2319
BsiHKAI	GWGCWC	1 cut(s)	2434
BsiHKCI	CYCGRG	1 cut(s)	2265
BsiSI	CCGG	4 cut(s)	869, 1987, 2266, 2511
BslI	CCNNNNNNNGG	3 cut(s)	693, 1593, 2272
BsmAI	GTCTC	2 cut(s)	298, 2073
BsmBI	CGTCTC	1 cut(s)	298
BsmI	GAATGC	1 cut(s)	1857
BsnI	GGCC	5 cut(s)	273, 312, 362, 1175, 2319
BsoBI	CYCGRG	1 cut(s)	2265
Bsp119I	TTCGAA	1 cut(s)	1239
Bsp1286I	GDGCHC	1 cut(s)	2434
Bsp1407I	TGTACA	1 cut(s)	1362
Bsp143I	GATC	6 cut(s)	250, 332, 394, 871, 970, 2480
Bsp19I	CCATGG	2 cut(s)	327, 2484
BspANI	GGCC	5 cut(s)	273, 312, 362, 1175, 2319
BspCNI	CTCAG	5 cut(s)	100, 541, 843, 1795, 2056
BspLI	GGNNCC	2 cut(s)	334, 2482
BspMAI	CTGCAG	1 cut(s)	1940
BspMI	ACCTGC	1 cut(s)	1802
BspPI	GGATC	5 cut(s)	327, 340, 879, 2475, 2488
BspT104I	TTCGAA	1 cut(s)	1239
BspTI	CTTAAG	1 cut(s)	2392
BsrBI	CCGCTC	3 cut(s)	279, 342, 349
BsrDI	GCAATG	3 cut(s)	1205, 1464, 2277
BsrGI	TGTACA	1 cut(s)	1362
BsrI	ACTGG	3 cut(s)	1554, 2178, 2523
BssECI	CCNNGG	7 cut(s)	327, 354, 1287, 1587, 2020, 2265, 2484
BssMI	GATC	6 cut(s)	250, 332, 394, 871, 970, 2480
BssT1I	CCWWGG	4 cut(s)	327, 1287, 1587, 2484
Bst2UI	CCWGG	2 cut(s)	433, 2497
Bst4CI	ACNGT	3 cut(s)	23, 661, 2012
Bst6I	CTCTTC	1 cut(s)	2104
BstAFI	CTTAAG	1 cut(s)	2392
BstAPI	GCANNNNNTGC	2 cut(s)	1673, 1817
BstAUI	TGTACA	1 cut(s)	1362
BstBAI	YACGTR	2 cut(s)	669, 987
BstBI	TTCGAA	1 cut(s)	1239
BstC8I	GCNNGC	6 cut(s)	351, 612, 917, 1485, 1936, 2592
BstDEI	CTNAG	9 cut(s)	87, 419, 549, 615, 851, 1119, 1145, 1803, 2064
BstDSI	CCRYGG	3 cut(s)	327, 2020, 2484
BstF5I	GGATG	4 cut(s)	158, 238, 1297, 1738
BstH2I	RGCGCY	3 cut(s)	94, 2197, 2414
BstHHI	GCGC	4 cut(s)	93, 2170, 2196, 2413
BstKTI	GATC	6 cut(s)	253, 335, 397, 874, 973, 2483
BstMAI	GTCTC	2 cut(s)	298, 2073
BstMBI	GATC	6 cut(s)	250, 332, 394, 871, 970, 2480
BstNI	CCWGG	2 cut(s)	433, 2497
BstNSI	RCATGY	1 cut(s)	2140
BstSCI	CCNGG	4 cut(s)	431, 2264, 2265, 2495
BstSFI	CTRYAG	4 cut(s)	1697, 1936, 2038, 2304
BstSLI	GKGCMC	1 cut(s)	2434
BstSNI	TACGTA	2 cut(s)	669, 987
BstV1I	GCAGC	7 cut(s)	1663, 1679, 1786, 1950, 2248, 2476, 2479
BstV2I	GAAGAC	1 cut(s)	2244
BstX2I	RGATCY	2 cut(s)	332, 2480
BstXI	CCANNNNNNTGG	1 cut(s)	1183
BstYI	RGATCY	2 cut(s)	332, 2480
BsuRI	GGCC	5 cut(s)	273, 312, 362, 1175, 2319
BtgI	CCRYGG	3 cut(s)	327, 2020, 2484
BtsCI	GGATG	4 cut(s)	158, 238, 1297, 1738
BtsI	GCAGTG	4 cut(s)	174, 192, 531, 789
BtsIMutI	CAGTG	6 cut(s)	19, 174, 192, 531, 789, 2516
BveI	ACCTGC	1 cut(s)	1802
Cac8I	GCNNGC	6 cut(s)	351, 612, 917, 1485, 1936, 2592
CaiI	CAGNNNCTG	2 cut(s)	79, 1724
CfoI	GCGC	4 cut(s)	93, 2170, 2196, 2413
Cfr13I	GGNCC	3 cut(s)	271, 310, 361
Cfr9I	CCCGGG	1 cut(s)	2265
CseI	GACGC	1 cut(s)	1358
Csp6I	GTAC	3 cut(s)	582, 1098, 1363
CviAII	CATG	9 cut(s)	328, 1883, 2032, 2137, 2229, 2279, 2283, 2425, 2485
CviQI	GTAC	3 cut(s)	582, 1098, 1363
DdeI	CTNAG	9 cut(s)	87, 419, 549, 615, 851, 1119, 1145, 1803, 2064
DpnI	GATC	6 cut(s)	252, 334, 396, 873, 972, 2482
DpnII	GATC	6 cut(s)	250, 332, 394, 871, 970, 2480
DraI	TTTAAA	1 cut(s)	1929
EaeI	YGGCCR	1 cut(s)	1173
Eam1104I	CTCTTC	1 cut(s)	2104
EarI	CTCTTC	1 cut(s)	2104
Eco105I	TACGTA	2 cut(s)	669, 987
Eco130I	CCWWGG	4 cut(s)	327, 1287, 1587, 2484
Eco57I	CTGAAG	3 cut(s)	1514, 1701, 1746
Eco88I	CYCGRG	1 cut(s)	2265
EcoO109I	RGGNCCY	1 cut(s)	361
EcoRI	GAATTC	1 cut(s)	2224
EcoRII	CCWGG	2 cut(s)	431, 2495
EcoT14I	CCWWGG	4 cut(s)	327, 1287, 1587, 2484
EcoT22I	ATGCAT	2 cut(s)	1884, 2284
ErhI	CCWWGG	4 cut(s)	327, 1287, 1587, 2484
Esp3I	CGTCTC	1 cut(s)	298
FaeI	CATG	9 cut(s)	331, 1886, 2035, 2140, 2232, 2282, 2286, 2428, 2488
FalI	AAGNNNNNCTT	2 cut(s)	2441, 2473
FatI	CATG	9 cut(s)	327, 1882, 2031, 2136, 2228, 2278, 2282, 2424, 2484
FauI	CCCGC	2 cut(s)	434, 908
FbaI	TGATCA	1 cut(s)	970
FokI	GGATG	4 cut(s)	145, 225, 1304, 1745
FspBI	CTAG	3 cut(s)	567, 896, 1889
GlaI	GCGC	4 cut(s)	92, 2169, 2195, 2412
GsuI	CTGGAG	2 cut(s)	415, 2540
HaeII	RGCGCY	3 cut(s)	94, 2197, 2414
HaeIII	GGCC	5 cut(s)	273, 312, 362, 1175, 2319
HapII	CCGG	4 cut(s)	869, 1987, 2266, 2511
HgaI	GACGC	1 cut(s)	1358
HhaI	GCGC	4 cut(s)	93, 2170, 2196, 2413
Hin1II	CATG	9 cut(s)	331, 1886, 2035, 2140, 2232, 2282, 2286, 2428, 2488
Hin6I	GCGC	4 cut(s)	91, 2168, 2194, 2411
HinP1I	GCGC	4 cut(s)	91, 2168, 2194, 2411
HindIII	AAGCTT	1 cut(s)	1226
HpaII	CCGG	4 cut(s)	869, 1987, 2266, 2511
HphI	GGTGA	3 cut(s)	250, 1383, 2393
Hpy166II	GTNNAC	3 cut(s)	1520, 2008, 2432
Hpy188I	TCNGA	9 cut(s)	250, 448, 725, 1044, 1054, 1371, 1726, 1875, 2130
Hpy188III	TCNNGA	5 cut(s)	404, 470, 974, 1184, 2537
Hpy8I	GTNNAC	3 cut(s)	1520, 2008, 2432
HpyAV	CCTTC	9 cut(s)	1071, 1246, 1456, 1489, 1586, 1721, 1828, 2180, 2309
HpyCH4III	ACNGT	3 cut(s)	23, 661, 2012
HpyCH4IV	ACGT	4 cut(s)	668, 986, 1384, 1905
HpyF3I	CTNAG	9 cut(s)	87, 419, 549, 615, 851, 1119, 1145, 1803, 2064
HpySE526I	ACGT	4 cut(s)	668, 986, 1384, 1905
Hsp92II	CATG	9 cut(s)	331, 1886, 2035, 2140, 2232, 2282, 2286, 2428, 2488
HspAI	GCGC	4 cut(s)	91, 2168, 2194, 2411
Ksp22I	TGATCA	1 cut(s)	970
Kzo9I	GATC	6 cut(s)	250, 332, 394, 871, 970, 2480
LmnI	GCTCC	3 cut(s)	284, 862, 2572
Lsp1109I	GCAGC	7 cut(s)	1663, 1679, 1786, 1950, 2248, 2476, 2479
MaeI	CTAG	3 cut(s)	567, 896, 1889
MaeII	ACGT	4 cut(s)	668, 986, 1384, 1905
MaeIII	GTNAC	7 cut(s)	256, 769, 1087, 1612, 1909, 2381, 2453
MalI	GATC	6 cut(s)	252, 334, 396, 873, 972, 2482
MbiI	CCGCTC	3 cut(s)	279, 342, 349
MboI	GATC	6 cut(s)	250, 332, 394, 871, 970, 2480
MflI	RGATCY	2 cut(s)	332, 2480
MhlI	GDGCHC	1 cut(s)	2434
MlsI	TGGCCA	1 cut(s)	1175
MluNI	TGGCCA	1 cut(s)	1175
MlyI	GAGTC	3 cut(s)	743, 2075, 2090
MmeI	TCCRAC	1 cut(s)	476
Mox20I	TGGCCA	1 cut(s)	1175
Mph1103I	ATGCAT	2 cut(s)	1884, 2284
MroXI	GAANNNNTTC	1 cut(s)	1596
MscI	TGGCCA	1 cut(s)	1175
Msp20I	TGGCCA	1 cut(s)	1175
MspA1I	CMGCKG	1 cut(s)	1670
MspCI	CTTAAG	1 cut(s)	2392
MspI	CCGG	4 cut(s)	869, 1987, 2266, 2511
MspR9I	CCNGG	4 cut(s)	433, 2266, 2267, 2497
Mva1269I	GAATGC	1 cut(s)	1857
MvaI	CCWGG	2 cut(s)	433, 2497
NciI	CCSGG	2 cut(s)	2266, 2267
NcoI	CCATGG	2 cut(s)	327, 2484
NdeII	GATC	6 cut(s)	250, 332, 394, 871, 970, 2480
NlaIII	CATG	9 cut(s)	331, 1886, 2035, 2140, 2232, 2282, 2286, 2428, 2488
NlaIV	GGNNCC	2 cut(s)	334, 2482
NmeAIII	GCCGAG	1 cut(s)	379
NmuCI	GTSAC	5 cut(s)	256, 1087, 1612, 1909, 2381
NsiI	ATGCAT	2 cut(s)	1884, 2284
NspI	RCATGY	1 cut(s)	2140
NspV	TTCGAA	1 cut(s)	1239
PcsI	WCGNNNNNNNCGW	2 cut(s)	390, 674
PctI	GAATGC	1 cut(s)	1857
PdmI	GAANNNNTTC	1 cut(s)	1596
PfeI	GAWTC	9 cut(s)	288, 505, 746, 876, 1556, 1597, 1706, 1744, 2507
PleI	GAGTC	3 cut(s)	742, 2074, 2090
PpsI	GAGTC	3 cut(s)	742, 2074, 2090
Ppu21I	YACGTR	2 cut(s)	669, 987
PsiI	TTATAA	3 cut(s)	885, 1305, 1620
Psp1406I	AACGTT	1 cut(s)	1905
Psp6I	CCWGG	2 cut(s)	431, 2495
PspGI	CCWGG	2 cut(s)	431, 2495
PspN4I	GGNNCC	2 cut(s)	334, 2482
PspPI	GGNCC	3 cut(s)	271, 310, 361
PstI	CTGCAG	1 cut(s)	1940
PstNI	CAGNNNCTG	2 cut(s)	79, 1724
PsuI	RGATCY	2 cut(s)	332, 2480
PvuII	CAGCTG	1 cut(s)	1670
RsaI	GTAC	3 cut(s)	583, 1099, 1364
RsaNI	GTAC	3 cut(s)	582, 1098, 1363
Sau3AI	GATC	6 cut(s)	250, 332, 394, 871, 970, 2480
Sau96I	GGNCC	3 cut(s)	271, 310, 361
ScaI	AGTACT	2 cut(s)	583, 1099
SchI	GAGTC	3 cut(s)	743, 2075, 2090
ScrFI	CCNGG	4 cut(s)	433, 2266, 2267, 2497
SduI	GDGCHC	1 cut(s)	2434
SfcI	CTRYAG	4 cut(s)	1697, 1936, 2038, 2304
SfuI	TTCGAA	1 cut(s)	1239
SmaI	CCCGGG	1 cut(s)	2267
SmlI	CTYRAG	1 cut(s)	2392
SmoI	CTYRAG	1 cut(s)	2392
SnaBI	TACGTA	2 cut(s)	669, 987
SrfI	GCCCGGGC	1 cut(s)	2267
SspI	AATATT	1 cut(s)	1072
SspMI	CTAG	3 cut(s)	567, 896, 1889
StyD4I	CCNGG	4 cut(s)	431, 2264, 2265, 2495
StyI	CCWWGG	4 cut(s)	327, 1287, 1587, 2484
TaaI	ACNGT	3 cut(s)	23, 661, 2012
TaiI	ACGT	4 cut(s)	671, 989, 1387, 1908
TaqI	TCGA	8 cut(s)	469, 737, 874, 910, 934, 1239, 1600, 2222
TaqII	GACCGA	2 cut(s)	1635, 2147
TatI	WGTACW	3 cut(s)	581, 1097, 1362
TauI	GCSGC	6 cut(s)	102, 182, 276, 279, 315, 1689
TfiI	GAWTC	9 cut(s)	288, 505, 746, 876, 1556, 1597, 1706, 1744, 2507
TscAI	CASTG	6 cut(s)	26, 181, 199, 531, 789, 2523
TseFI	GTSAC	5 cut(s)	256, 1087, 1612, 1909, 2381
TseI	GCWGC	7 cut(s)	1667, 1676, 1799, 1938, 2261, 2489, 2492
Tsp45I	GTSAC	5 cut(s)	256, 1087, 1612, 1909, 2381
TspGWI	ACGGA	2 cut(s)	2037, 2166
TspMI	CCCGGG	1 cut(s)	2265
TspRI	CASTG	6 cut(s)	26, 181, 199, 531, 789, 2523
Vha464I	CTTAAG	1 cut(s)	2392
VneI	GTGCAC	1 cut(s)	2430
XapI	RAATTY	2 cut(s)	763, 2224
XceI	RCATGY	1 cut(s)	2140
XcmI	CCANNNNNNNNNTGG	3 cut(s)	304, 325, 2455
XmaI	CCCGGG	1 cut(s)	2265
XmnI	GAANNNNTTC	1 cut(s)	1596
XspI	CTAG	3 cut(s)	567, 896, 1889
ZrmI	AGTACT	2 cut(s)	583, 1099
Zsp2I	ATGCAT	2 cut(s)	1884, 2284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.