Ribonuclease III domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55140 AT1G55140 AT3G13740 AT3G13740 AT3G13740 AT3G13740 AT3G13740 AT3G13740 |
| fragaria_vesca | FvH4_4g12940 FvH4_4g12940 FvH4_4g12940 FvH4_4g12940 FvH4_4g12940 FvH4_4g12940 FvH4_4g12940 FvH4_4g12940 |
| malus_domestica | MD09G1194100.v1.1 |
| prunus_persica | Prupe.3G050600_v2.0.a1 Prupe.3G050600_v2.0.a1 |
| pyrus_communis | pycom09g11060 |
| rosa_chinensis | RchiOBHm_Chr6g0267021 |
| rosa_laevigata | RLG00000014049 |
| rosa_multiflora | Rmu_sc0013804.1_g000009 |
| rosa_roxburghii | Rroxscaffold_7G00201220 |
| rosa_rugosa | Rorug06G0028400 Rorug06G0028500 Rorug06G0028600 |
| rosa_samantha | Rh4CG185500 Rh4DG170200 Rh6AG150100 Rh6BG151000 Rh6CG146200 Rh6DG135100 |
| rosa_wichuraiana | Rw4G014630 Rw6G013000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 612 |
| AccB1I | GGYRCC | 2 cut(s) | 149, 277 |
| AciI | CCGC | 2 cut(s) | 97, 353 |
| AcuI | CTGAAG | 1 cut(s) | 12 |
| AfaI | GTAC | 5 cut(s) | 240, 297, 327, 345, 465 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 227 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 624, 656 |
| AluBI | AGCT | 6 cut(s) | 62, 224, 365, 391, 569, 694 |
| AluI | AGCT | 6 cut(s) | 62, 224, 365, 391, 569, 694 |
| Ama87I | CYCGRG | 1 cut(s) | 106 |
| ApeKI | GCWGC | 1 cut(s) | 569 |
| AsuHPI | GGTGA | 2 cut(s) | 166, 386 |
| AvaI | CYCGRG | 1 cut(s) | 106 |
| AxyI | CCTNAGG | 1 cut(s) | 741 |
| BanI | GGYRCC | 2 cut(s) | 149, 277 |
| BbvI | GCAGC | 1 cut(s) | 556 |
| BccI | CCATC | 4 cut(s) | 28, 267, 295, 448 |
| BciVI | GTATCC | 1 cut(s) | 64 |
| BfaI | CTAG | 3 cut(s) | 282, 312, 765 |
| BfuI | GTATCC | 1 cut(s) | 64 |
| BisI | GCNGC | 2 cut(s) | 354, 570 |
| BlsI | GCNGC | 2 cut(s) | 355, 571 |
| BmeT110I | CYCGRG | 1 cut(s) | 106 |
| BmiI | GGNNCC | 4 cut(s) | 151, 279, 738, 762 |
| BmsI | GCATC | 3 cut(s) | 365, 472, 629 |
| BpmI | CTGGAG | 1 cut(s) | 476 |
| BpuEI | CTTGAG | 1 cut(s) | 210 |
| BsaJI | CCNNGG | 1 cut(s) | 335 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 227 |
| Bse118I | RCCGGY | 1 cut(s) | 146 |
| Bse1I | ACTGG | 1 cut(s) | 633 |
| Bse21I | CCTNAGG | 1 cut(s) | 741 |
| BseDI | CCNNGG | 1 cut(s) | 335 |
| BseGI | GGATG | 1 cut(s) | 487 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 227 |
| BseMII | CTCAG | 3 cut(s) | 416, 494, 732 |
| BseNI | ACTGG | 1 cut(s) | 633 |
| BseRI | GAGGAG | 1 cut(s) | 758 |
| BseXI | GCAGC | 1 cut(s) | 556 |
| BseYI | CCCAGC | 3 cut(s) | 134, 220, 694 |
| BshNI | GGYRCC | 2 cut(s) | 149, 277 |
| BsiHKCI | CYCGRG | 1 cut(s) | 106 |
| BsiSI | CCGG | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 227 |
| BsoBI | CYCGRG | 1 cut(s) | 106 |
| Bsp143I | GATC | 1 cut(s) | 445 |
| BspACI | CCGC | 2 cut(s) | 97, 353 |
| BspCNI | CTCAG | 3 cut(s) | 417, 495, 733 |
| BspHI | TCATGA | 1 cut(s) | 684 |
| BspLI | GGNNCC | 4 cut(s) | 151, 279, 738, 762 |
| BspT107I | GGYRCC | 2 cut(s) | 149, 277 |
| BsrFI | RCCGGY | 1 cut(s) | 146 |
| BsrI | ACTGG | 1 cut(s) | 633 |
| BssAI | RCCGGY | 1 cut(s) | 146 |
| BssECI | CCNNGG | 1 cut(s) | 335 |
| BssMI | GATC | 1 cut(s) | 445 |
| Bst4CI | ACNGT | 3 cut(s) | 55, 172, 238 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 482 |
| BstC8I | GCNNGC | 2 cut(s) | 404, 594 |
| BstDEI | CTNAG | 3 cut(s) | 425, 503, 741 |
| BstF5I | GGATG | 1 cut(s) | 487 |
| BstKTI | GATC | 1 cut(s) | 448 |
| BstMBI | GATC | 1 cut(s) | 445 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 277, 362, 482, 602 |
| BstV1I | GCAGC | 1 cut(s) | 556 |
| Bsu36I | CCTNAGG | 1 cut(s) | 741 |
| BsuI | GTATCC | 1 cut(s) | 64 |
| BtgZI | GCGATG | 2 cut(s) | 47, 286 |
| BtsCI | GGATG | 1 cut(s) | 487 |
| BtsI | GCAGTG | 2 cut(s) | 138, 485 |
| BtsIMutI | CAGTG | 4 cut(s) | 60, 138, 485, 626 |
| Cac8I | GCNNGC | 2 cut(s) | 404, 594 |
| CciI | TCATGA | 1 cut(s) | 684 |
| Cfr10I | RCCGGY | 1 cut(s) | 146 |
| CseI | GACGC | 1 cut(s) | 293 |
| Csp6I | GTAC | 5 cut(s) | 239, 296, 326, 344, 464 |
| CviAII | CATG | 1 cut(s) | 685 |
| CviQI | GTAC | 5 cut(s) | 239, 296, 326, 344, 464 |
| DdeI | CTNAG | 3 cut(s) | 425, 503, 741 |
| DpnI | GATC | 1 cut(s) | 447 |
| DpnII | GATC | 1 cut(s) | 445 |
| Eco57I | CTGAAG | 1 cut(s) | 12 |
| Eco81I | CCTNAGG | 1 cut(s) | 741 |
| Eco88I | CYCGRG | 1 cut(s) | 106 |
| FaeI | CATG | 1 cut(s) | 688 |
| FatI | CATG | 1 cut(s) | 684 |
| Fnu4HI | GCNGC | 2 cut(s) | 354, 570 |
| FokI | GGATG | 1 cut(s) | 494 |
| Fsp4HI | GCNGC | 2 cut(s) | 354, 570 |
| FspBI | CTAG | 3 cut(s) | 282, 312, 765 |
| GluI | GCNGC | 2 cut(s) | 354, 570 |
| GsaI | CCCAGC | 3 cut(s) | 138, 224, 698 |
| GsuI | CTGGAG | 1 cut(s) | 476 |
| HapII | CCGG | 1 cut(s) | 147 |
| HgaI | GACGC | 1 cut(s) | 293 |
| Hin1II | CATG | 1 cut(s) | 688 |
| HinfI | GANTC | 3 cut(s) | 84, 699, 710 |
| HpaII | CCGG | 1 cut(s) | 147 |
| HphI | GGTGA | 2 cut(s) | 166, 386 |
| Hpy188I | TCNGA | 2 cut(s) | 504, 523 |
| Hpy188III | TCNNGA | 2 cut(s) | 493, 685 |
| HpyAV | CCTTC | 1 cut(s) | 218 |
| HpyCH4III | ACNGT | 3 cut(s) | 55, 172, 238 |
| HpyCH4IV | ACGT | 1 cut(s) | 466 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 381, 485, 721 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 277, 362, 482, 602 |
| HpyF3I | CTNAG | 3 cut(s) | 425, 503, 741 |
| HpySE526I | ACGT | 1 cut(s) | 466 |
| Hsp92II | CATG | 1 cut(s) | 688 |
| Kzo9I | GATC | 1 cut(s) | 445 |
| LmnI | GCTCC | 4 cut(s) | 495, 667, 736, 766 |
| Lsp1109I | GCAGC | 1 cut(s) | 556 |
| LweI | GCATC | 3 cut(s) | 365, 472, 629 |
| MaeI | CTAG | 3 cut(s) | 282, 312, 765 |
| MaeII | ACGT | 1 cut(s) | 466 |
| MaeIII | GTNAC | 3 cut(s) | 49, 172, 506 |
| MalI | GATC | 1 cut(s) | 447 |
| MboI | GATC | 1 cut(s) | 445 |
| MboII | GAAGA | 7 cut(s) | 15, 18, 446, 539, 615, 689, 705 |
| MluCI | AATT | 1 cut(s) | 511 |
| MlyI | GAGTC | 1 cut(s) | 78 |
| MmeI | TCCRAC | 1 cut(s) | 191 |
| MnlI | CCTC | 7 cut(s) | 174, 205, 327, 345, 429, 736, 739 |
| MseI | TTAA | 2 cut(s) | 690, 769 |
| MspA1I | CMGCKG | 1 cut(s) | 569 |
| MspI | CCGG | 1 cut(s) | 147 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 277, 362, 482, 602 |
| NdeII | GATC | 1 cut(s) | 445 |
| NlaIII | CATG | 1 cut(s) | 688 |
| NlaIV | GGNNCC | 4 cut(s) | 151, 279, 738, 762 |
| NmuCI | GTSAC | 3 cut(s) | 49, 172, 506 |
| PagI | TCATGA | 1 cut(s) | 684 |
| PfeI | GAWTC | 2 cut(s) | 699, 710 |
| PkrI | GCNGC | 2 cut(s) | 355, 571 |
| PleI | GAGTC | 1 cut(s) | 78 |
| PpsI | GAGTC | 1 cut(s) | 78 |
| PsiI | TTATAA | 1 cut(s) | 612 |
| PspFI | CCCAGC | 3 cut(s) | 134, 220, 694 |
| PspN4I | GGNNCC | 4 cut(s) | 151, 279, 738, 762 |
| PvuII | CAGCTG | 1 cut(s) | 569 |
| RsaI | GTAC | 5 cut(s) | 240, 297, 327, 345, 465 |
| RsaNI | GTAC | 5 cut(s) | 239, 296, 326, 344, 464 |
| SaqAI | TTAA | 2 cut(s) | 690, 769 |
| SatI | GCNGC | 2 cut(s) | 354, 570 |
| Sau3AI | GATC | 1 cut(s) | 445 |
| SchI | GAGTC | 1 cut(s) | 78 |
| SfaNI | GCATC | 3 cut(s) | 365, 472, 629 |
| SmlI | CTYRAG | 1 cut(s) | 225 |
| SmoI | CTYRAG | 1 cut(s) | 225 |
| Sse9I | AATT | 1 cut(s) | 511 |
| SsiI | CCGC | 2 cut(s) | 97, 353 |
| SspI | AATATT | 1 cut(s) | 559 |
| SspMI | CTAG | 3 cut(s) | 282, 312, 765 |
| TaaI | ACNGT | 3 cut(s) | 55, 172, 238 |
| TaiI | ACGT | 1 cut(s) | 469 |
| TaqI | TCGA | 1 cut(s) | 432 |
| TaqII | GACCGA | 1 cut(s) | 327 |
| TasI | AATT | 1 cut(s) | 511 |
| TatI | WGTACW | 1 cut(s) | 343 |
| TauI | GCSGC | 1 cut(s) | 356 |
| TfiI | GAWTC | 2 cut(s) | 699, 710 |
| Tru1I | TTAA | 2 cut(s) | 690, 769 |
| Tru9I | TTAA | 2 cut(s) | 690, 769 |
| TscAI | CASTG | 4 cut(s) | 60, 145, 492, 633 |
| TseFI | GTSAC | 3 cut(s) | 49, 172, 506 |
| TseI | GCWGC | 1 cut(s) | 569 |
| Tsp45I | GTSAC | 3 cut(s) | 49, 172, 506 |
| TspDTI | ATGAA | 1 cut(s) | 54 |
| TspGWI | ACGGA | 1 cut(s) | 187 |
| TspRI | CASTG | 4 cut(s) | 60, 145, 492, 633 |
| XspI | CTAG | 3 cut(s) | 282, 312, 765 |