Prupe.3G056200_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
3992258 .. 3994719
2462 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G056200.1

Sequence Viewer

Length: 1083 bp
ATGGGCAGCCATAGCCAATGCTTGACAGCTGCAGCCTTGGGTTTGGTTTTTGTATGTGCATTGTTTGTAAGTGGTGGAAATGCACAAGAAGCAACCACTCTTGTTCCAGCCATCATGACCTTTGGTGACTCTGCAGTTGATGTGGGCAACAATGACTATCTCCCAACTATCTTCAAGGCTAATTACCCTCCATATGGAAGGGACTTTGTCAACCATCAGCCTACTGGCAGGTTTTGCAATGGGAAGCTAGCCACTGACATCACGGCTGACACTCTGGGGTTCACGACTTACCCACCGGCATACCTTAGCCCACAGGCATCAGGGAATAACCTTCTGATTGGAGCCAACTTCGCTTCAGCTGCATCCGGTTACGACGAAAAAGCAGCAACTCTAAATCATGCAATCCCATTGTCCCAGCAGCTTCAATACTTCAGGGAGTATCAGGGTAAGCTGGCCGAGGTAGCAGGCAGTAAGAAAGCAGCATCCATCATCAAGGATGCACTCTATTTATTGAGTGCTGGCAACAGTGACTTTCTTCAGAACTATTATGTCAACCCTTATCTTAACAGAGTCTACACTCCTGAGCAATATTCCTCTATCCTTGTTGGCCTCTTCTCAAGCTTTGTTAAGGATTTGTATGGCTCGGGAGCCAGGAAAATTGGTGTGACTTCACTCCCTCCATTGGGTTGCCTTCCAGCTGCAATCACCCTATTTGGATACCATGAGCAAGGGTGCGTGGCTAGAATCAACTCTGATGCCCAAGGGTTCAATAAGAAGATAAGCTCCGCCGCAGCAAATCTCCAAAAGCAACTTCCTGGCCTTAAGATCGTCATCTTCGACATTTTCAAGCCTCTCTATGATGTGATTAAAGCCCCATCGAATTACGGGTTTGCGGAAGCAAGGAGAGGTTGCTGTGGAACTGGGATTGTAGAGACAACATCACTGCTGTGCAATCCAAAGTCGATCGGAACTTGTTCAAATGCGTCTCAATACGTGTTCTGGGATAGCGTCCATCCATCTCAAGCTGCTAATCAAGTTCTTGCTGATGCATTGATTATCCAGGGGATCACCCTCATTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

361

Amino Acids

38.34

Weight (kDa)

7.51

Isoelectric Point (pI)

24.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 219
AccI GTMKAC 1 cut(s) 573
AciI CCGC 3 cut(s) 786, 789, 893
AclWI GGATC 1 cut(s) 1073
AcoI YGGCCR 1 cut(s) 453
AcuI CTGAAG 3 cut(s) 339, 415, 521
AfiI CCNNNNNNNGG 3 cut(s) 194, 682, 683
AflII CTTAAG 1 cut(s) 821
AflIII ACRYGT 1 cut(s) 993
AgsI TTSAA 5 cut(s) 175, 425, 769, 847, 978
AjnI CCWGG 3 cut(s) 650, 814, 1059
AjuI GAANNNNNNNTTGG 2 cut(s) 795, 827
AleI CACNNNNGTG 1 cut(s) 946
AluBI AGCT 9 cut(s) 29, 247, 359, 421, 451, 621, 698, 783, 1025
AluI AGCT 9 cut(s) 29, 247, 359, 421, 451, 621, 698, 783, 1025
Alw26I GTCTC 2 cut(s) 926, 990
AlwI GGATC 1 cut(s) 1073
Ama87I CYCGRG 1 cut(s) 643
AoxI GGCC 3 cut(s) 453, 607, 817
Asp700I GAANNNNTTC 1 cut(s) 973
AsuHPI GGTGA 3 cut(s) 137, 697, 1060
AsuNHI GCTAGC 1 cut(s) 247
AvaI CYCGRG 1 cut(s) 643
BccI CCATC 6 cut(s) 119, 222, 494, 883, 1020, 1024
BceAI ACGGC 1 cut(s) 279
BciT130I CCWGG 3 cut(s) 652, 816, 1061
BciVI GTATCC 1 cut(s) 710
BcoDI GTCTC 2 cut(s) 926, 990
BfaI CTAG 2 cut(s) 248, 741
BfmI CTRYAG 2 cut(s) 30, 132
BfrI CTTAAG 1 cut(s) 821
BfuAI ACCTGC 1 cut(s) 219
BfuI GTATCC 1 cut(s) 710
Bme1390I CCNGG 3 cut(s) 652, 816, 1061
BmeT110I CYCGRG 1 cut(s) 643
BmiI GGNNCC 2 cut(s) 343, 649
BmrFI CCNGG 3 cut(s) 652, 816, 1061
BmrI ACTGGG 1 cut(s) 930
BmsI GCATC 6 cut(s) 326, 371, 487, 491, 745, 1036
BmtI GCTAGC 1 cut(s) 251
BmuI ACTGGG 1 cut(s) 930
Bpu10I CCTNAGC 2 cut(s) 305, 582
BpuEI CTTGAG 2 cut(s) 601, 1005
BsaAI YACGTR 1 cut(s) 994
BsaBI GATNNNNATC 1 cut(s) 830
BsaJI CCNNGG 4 cut(s) 36, 456, 760, 1060
BsaWI WCCGGW 1 cut(s) 365
Bsc4I CCNNNNNNNGG 3 cut(s) 194, 682, 683
Bse118I RCCGGY 1 cut(s) 295
Bse1I ACTGG 2 cut(s) 229, 925
Bse3DI GCAATG 1 cut(s) 244
Bse8I GATNNNNATC 1 cut(s) 830
BseBI CCWGG 3 cut(s) 652, 816, 1061
BseDI CCNNGG 4 cut(s) 36, 456, 760, 1060
BseGI GGATG 4 cut(s) 362, 482, 502, 1012
BseJI GATNNNNATC 1 cut(s) 830
BseLI CCNNNNNNNGG 3 cut(s) 194, 682, 683
BseMI GCAATG 1 cut(s) 244
BseMII CTCAG 1 cut(s) 573
BseNI ACTGG 2 cut(s) 229, 925
BseYI CCCAGC 1 cut(s) 414
Bsh1285I CGRYCG 1 cut(s) 966
BshFI GGCC 3 cut(s) 455, 609, 819
BsiEI CGRYCG 1 cut(s) 966
BsiHKCI CYCGRG 1 cut(s) 643
BsiSI CCGG 2 cut(s) 296, 366
BslFI GGGAC 2 cut(s) 215, 397
BslI CCNNNNNNNGG 3 cut(s) 194, 682, 683
BsmAI GTCTC 2 cut(s) 926, 990
BsmBI CGTCTC 1 cut(s) 990
BsmFI GGGAC 2 cut(s) 215, 397
BsnI GGCC 3 cut(s) 455, 609, 819
BsoBI CYCGRG 1 cut(s) 643
Bsp143I GATC 3 cut(s) 825, 963, 1065
BspACI CCGC 3 cut(s) 786, 789, 893
BspANI GGCC 3 cut(s) 455, 609, 819
BspCNI CTCAG 1 cut(s) 574
BspHI TCATGA 1 cut(s) 114
BspLI GGNNCC 2 cut(s) 343, 649
BspMAI CTGCAG 2 cut(s) 34, 136
BspMI ACCTGC 1 cut(s) 219
BspOI GCTAGC 1 cut(s) 251
BspPI GGATC 1 cut(s) 1073
BspTI CTTAAG 1 cut(s) 821
BsrDI GCAATG 1 cut(s) 244
BsrFI RCCGGY 1 cut(s) 295
BsrI ACTGG 2 cut(s) 229, 925
BssAI RCCGGY 1 cut(s) 295
BssECI CCNNGG 4 cut(s) 36, 456, 760, 1060
BssMI GATC 3 cut(s) 825, 963, 1065
BssT1I CCWWGG 2 cut(s) 36, 760
Bst2UI CCWGG 3 cut(s) 652, 816, 1061
Bst4CI ACNGT 1 cut(s) 527
Bst6I CTCTTC 1 cut(s) 617
BstAFI CTTAAG 1 cut(s) 821
BstAPI GCANNNNNTGC 1 cut(s) 234
BstBAI YACGTR 1 cut(s) 994
BstC8I GCNNGC 4 cut(s) 249, 453, 466, 520
BstDEI CTNAG 2 cut(s) 305, 582
BstF5I GGATG 4 cut(s) 362, 482, 502, 1012
BstKTI GATC 3 cut(s) 828, 966, 1068
BstMAI GTCTC 2 cut(s) 926, 990
BstMBI GATC 3 cut(s) 825, 963, 1065
BstMCI CGRYCG 1 cut(s) 966
BstMWI GCNNNNNNNGC 6 cut(s) 12, 89, 234, 350, 359, 461
BstNI CCWGG 3 cut(s) 652, 816, 1061
BstSCI CCNGG 3 cut(s) 650, 814, 1059
BstSFI CTRYAG 2 cut(s) 30, 132
BsuI GTATCC 1 cut(s) 710
BsuRI GGCC 3 cut(s) 455, 609, 819
BtsCI GGATG 4 cut(s) 362, 482, 502, 1012
BtsI GCAGTG 1 cut(s) 941
BtsIMutI CAGTG 3 cut(s) 252, 532, 941
BveI ACCTGC 1 cut(s) 219
Cac8I GCNNGC 4 cut(s) 249, 453, 466, 520
CciI TCATGA 1 cut(s) 114
Cfr10I RCCGGY 1 cut(s) 295
CseI GACGC 2 cut(s) 972, 997
CviAII CATG 3 cut(s) 115, 398, 722
DdeI CTNAG 2 cut(s) 305, 582
DpnI GATC 3 cut(s) 827, 965, 1067
DpnII GATC 3 cut(s) 825, 963, 1065
EaeI YGGCCR 1 cut(s) 453
Eam1104I CTCTTC 1 cut(s) 617
EarI CTCTTC 1 cut(s) 617
EciI GGCGGA 1 cut(s) 775
Eco130I CCWWGG 2 cut(s) 36, 760
Eco57I CTGAAG 3 cut(s) 339, 415, 521
Eco88I CYCGRG 1 cut(s) 643
EcoRII CCWGG 3 cut(s) 650, 814, 1059
EcoT14I CCWWGG 2 cut(s) 36, 760
EcoT22I ATGCAT 1 cut(s) 1051
ErhI CCWWGG 2 cut(s) 36, 760
Esp3I CGTCTC 1 cut(s) 990
FaeI CATG 3 cut(s) 118, 401, 725
FaqI GGGAC 2 cut(s) 215, 397
FatI CATG 3 cut(s) 114, 397, 721
FauNDI CATATG 1 cut(s) 193
FblI GTMKAC 1 cut(s) 573
FokI GGATG 4 cut(s) 349, 469, 509, 999
FspBI CTAG 2 cut(s) 248, 741
GsaI CCCAGC 1 cut(s) 418
HaeIII GGCC 3 cut(s) 455, 609, 819
HapII CCGG 2 cut(s) 296, 366
HgaI GACGC 2 cut(s) 972, 997
Hin1II CATG 3 cut(s) 118, 401, 725
HincII GTYRAC 2 cut(s) 211, 553
HindII GTYRAC 2 cut(s) 211, 553
HindIII AAGCTT 1 cut(s) 619
HinfI GANTC 3 cut(s) 128, 570, 744
HpaII CCGG 2 cut(s) 296, 366
HphI GGTGA 3 cut(s) 137, 697, 1060
Hpy166II GTNNAC 4 cut(s) 211, 282, 553, 574
Hpy188I TCNGA 4 cut(s) 336, 540, 754, 968
Hpy188III TCNNGA 4 cut(s) 115, 283, 581, 645
Hpy8I GTNNAC 4 cut(s) 211, 282, 553, 574
Hpy99I CGWCG 1 cut(s) 377
HpyAV CCTTC 3 cut(s) 192, 341, 701
HpyCH4III ACNGT 1 cut(s) 527
HpyCH4IV ACGT 1 cut(s) 993
HpyF10VI GCNNNNNNNGC 6 cut(s) 12, 89, 234, 350, 359, 461
HpyF3I CTNAG 2 cut(s) 305, 582
HpySE526I ACGT 1 cut(s) 993
Hsp92II CATG 3 cut(s) 118, 401, 725
Kzo9I GATC 3 cut(s) 825, 963, 1065
LmnI GCTCC 3 cut(s) 341, 647, 788
LweI GCATC 6 cut(s) 326, 371, 487, 491, 745, 1036
MaeI CTAG 2 cut(s) 248, 741
MaeII ACGT 1 cut(s) 993
MaeIII GTNAC 4 cut(s) 125, 368, 527, 664
MalI GATC 3 cut(s) 827, 965, 1067
MboI GATC 3 cut(s) 825, 963, 1065
MboII GAAGA 5 cut(s) 163, 527, 604, 787, 826
MluCI AATT 3 cut(s) 181, 657, 880
MlyI GAGTC 2 cut(s) 122, 579
MnlI CCTC 8 cut(s) 198, 451, 604, 620, 687, 861, 899, 1082
Mph1103I ATGCAT 1 cut(s) 1051
MroXI GAANNNNTTC 1 cut(s) 973
MseI TTAA 4 cut(s) 564, 627, 822, 867
MslI CAYNNNNRTG 1 cut(s) 946
MspA1I CMGCKG 3 cut(s) 29, 359, 698
MspCI CTTAAG 1 cut(s) 821
MspI CCGG 2 cut(s) 296, 366
MspR9I CCNGG 3 cut(s) 652, 816, 1061
MvaI CCWGG 3 cut(s) 652, 816, 1061
MwoI GCNNNNNNNGC 6 cut(s) 12, 89, 234, 350, 359, 461
NdeI CATATG 1 cut(s) 193
NdeII GATC 3 cut(s) 825, 963, 1065
NheI GCTAGC 1 cut(s) 247
NlaIII CATG 3 cut(s) 118, 401, 725
NlaIV GGNNCC 2 cut(s) 343, 649
NmeAIII GCCGAG 1 cut(s) 481
NmuCI GTSAC 3 cut(s) 125, 527, 664
NsiI ATGCAT 1 cut(s) 1051
OliI CACNNNNGTG 1 cut(s) 946
PagI TCATGA 1 cut(s) 114
PcsI WCGNNNNNNNCGW 1 cut(s) 834
PdmI GAANNNNTTC 1 cut(s) 973
PfeI GAWTC 1 cut(s) 744
PflFI GACNNNGTC 1 cut(s) 206
Ple19I CGATCG 1 cut(s) 966
PleI GAGTC 2 cut(s) 122, 578
PpsI GAGTC 2 cut(s) 122, 578
Ppu21I YACGTR 1 cut(s) 994
Psp6I CCWGG 3 cut(s) 650, 814, 1059
PspFI CCCAGC 1 cut(s) 414
PspGI CCWGG 3 cut(s) 650, 814, 1059
PspN4I GGNNCC 2 cut(s) 343, 649
PstI CTGCAG 2 cut(s) 34, 136
PsyI GACNNNGTC 1 cut(s) 206
PvuI CGATCG 1 cut(s) 966
PvuII CAGCTG 3 cut(s) 29, 359, 698
RseI CAYNNNNRTG 1 cut(s) 946
SaqAI TTAA 4 cut(s) 564, 627, 822, 867
Sau3AI GATC 3 cut(s) 825, 963, 1065
SchI GAGTC 2 cut(s) 122, 579
ScrFI CCNGG 3 cut(s) 652, 816, 1061
SfaNI GCATC 6 cut(s) 326, 371, 487, 491, 745, 1036
SfcI CTRYAG 2 cut(s) 30, 132
SmiMI CAYNNNNRTG 1 cut(s) 946
SmlI CTYRAG 3 cut(s) 616, 821, 1020
SmoI CTYRAG 3 cut(s) 616, 821, 1020
Sse9I AATT 3 cut(s) 181, 657, 880
SsiI CCGC 3 cut(s) 786, 789, 893
SspI AATATT 1 cut(s) 590
SspMI CTAG 2 cut(s) 248, 741
StyD4I CCNGG 3 cut(s) 650, 814, 1059
StyI CCWWGG 2 cut(s) 36, 760
TaaI ACNGT 1 cut(s) 527
TaiI ACGT 1 cut(s) 996
TaqI TCGA 3 cut(s) 837, 878, 962
TasI AATT 3 cut(s) 181, 657, 880
TauI GCSGC 1 cut(s) 791
TfiI GAWTC 1 cut(s) 744
Tru1I TTAA 4 cut(s) 564, 627, 822, 867
Tru9I TTAA 4 cut(s) 564, 627, 822, 867
TscAI CASTG 3 cut(s) 259, 532, 948
TseFI GTSAC 3 cut(s) 125, 527, 664
Tsp45I GTSAC 3 cut(s) 125, 527, 664
TspRI CASTG 3 cut(s) 259, 532, 948
Tth111I GACNNNGTC 1 cut(s) 206
Vha464I CTTAAG 1 cut(s) 821
XcmI CCANNNNNNNNNTGG 1 cut(s) 221
XmiI GTMKAC 1 cut(s) 573
XmnI GAANNNNTTC 1 cut(s) 973
XspI CTAG 2 cut(s) 248, 741
Zsp2I ATGCAT 1 cut(s) 1051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.