Prupe.3G241100_v2.0.a1

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
23480216 .. 23481251
1036 bp
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UTR
Exon/CDS
Intron
Prupe.3G241100.1

Sequence Viewer

Length: 642 bp
ATGAAGACTTTGAAGGGTTGGCAGATCCGAGTCTGGAAAATAATTATGGAGAATGAAATGTTTCAAATGATTGAGCTGGCTTCAGCTTGTGTGCGTCATTCAGCTGTGAAAAGGCCACGGATGAGACAGGCTCTGCCTTTGCTTTCTCAAGCACTTGAGAATGAAGACTTTCAAGGGTTGGCAGATCCAAGGCTGGAAAAGAATTATGTTGAGAATGAAATGTTTCGAATGATTGAGGCGGCTTCAGCTTGTGTGCGTCATGCAGCTGCGAAAAGGCCATGGATGAGACAGGTGGTAAGGGCTTTTGACTTCTTAGATGAATTATCAGATCTCAGTAACGGAATGAAACCTGGACAAAGTGAAATTTTTGATTCCGCACAACAATCTGCACAAATTAGAATGTTTCAGAGAATGGCATTTGGTAGTCAAGACAACAGTACAAGTTTTTTTAATCACACTCGGAGTAGCTGGAAAAGTAGAGACTCTAGAGAGCACGGGGACACAACTGGGAGTAGCTGGACAAAACATGGTTTCGTTGTCAGGATGCACATTTCTGTATTCTTTTGTAATCTAGATTCATTGATACAGTATTGTATGTATCTGTGTTTGTTGTTTTCACATATAATATGCGAACTTGTCTGA

Protein Analysis

214

Amino Acids

24.77

Weight (kDa)

8.57

Isoelectric Point (pI)

50.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 239, 375
AclWI GGATC 2 cut(s) 19, 179
AcsI RAATTY 1 cut(s) 363
AcuI CTGAAG 2 cut(s) 66, 228
AfaI GTAC 1 cut(s) 439
AgsI TTSAA 3 cut(s) 13, 65, 173
AjnI CCWGG 1 cut(s) 349
AluBI AGCT 7 cut(s) 76, 86, 104, 248, 266, 468, 516
AluI AGCT 7 cut(s) 76, 86, 104, 248, 266, 468, 516
Alw21I GWGCWC 1 cut(s) 495
Alw26I GTCTC 3 cut(s) 118, 280, 474
AlwI GGATC 2 cut(s) 19, 179
AlwNI CAGNNNCTG 1 cut(s) 133
AoxI GGCC 2 cut(s) 113, 275
ApeKI GCWGC 2 cut(s) 263, 266
ApoI RAATTY 1 cut(s) 363
Asp700I GAANNNNTTC 3 cut(s) 60, 168, 222
AsuII TTCGAA 1 cut(s) 226
BbsI GAAGAC 2 cut(s) 11, 171
Bbv12I GWGCWC 1 cut(s) 495
BbvI GCAGC 2 cut(s) 253, 275
BciT130I CCWGG 1 cut(s) 351
BcoDI GTCTC 3 cut(s) 118, 280, 474
BfaI CTAG 2 cut(s) 486, 572
BglII AGATCT 1 cut(s) 328
BisI GCNGC 3 cut(s) 240, 264, 267
BlsI GCNGC 3 cut(s) 241, 265, 268
Bme1390I CCNGG 1 cut(s) 351
BmrFI CCNGG 1 cut(s) 351
BmrI ACTGGG 1 cut(s) 516
BmsI GCATC 1 cut(s) 534
BmuI ACTGGG 1 cut(s) 516
BpiI GAAGAC 2 cut(s) 11, 171
BplI GAGNNNNNCTC 2 cut(s) 115, 147
Bpu14I TTCGAA 1 cut(s) 226
BpuEI CTTGAG 2 cut(s) 132, 176
BsaJI CCNNGG 3 cut(s) 116, 188, 278
Bse1I ACTGG 1 cut(s) 511
BseBI CCWGG 1 cut(s) 351
BseDI CCNNGG 3 cut(s) 116, 188, 278
BseGI GGATG 3 cut(s) 126, 288, 549
BseMII CTCAG 1 cut(s) 346
BseNI ACTGG 1 cut(s) 511
BseXI GCAGC 2 cut(s) 253, 275
BsgI GTGCAG 1 cut(s) 372
BshFI GGCC 2 cut(s) 115, 277
BsiHKAI GWGCWC 1 cut(s) 495
BslFI GGGAC 1 cut(s) 512
BsmAI GTCTC 3 cut(s) 118, 280, 474
BsmFI GGGAC 1 cut(s) 512
BsnI GGCC 2 cut(s) 115, 277
Bsp119I TTCGAA 1 cut(s) 226
Bsp1286I GDGCHC 1 cut(s) 495
Bsp143I GATC 3 cut(s) 24, 184, 328
Bsp19I CCATGG 1 cut(s) 278
BspACI CCGC 2 cut(s) 239, 375
BspANI GGCC 2 cut(s) 115, 277
BspCNI CTCAG 1 cut(s) 345
BspPI GGATC 2 cut(s) 19, 179
BspT104I TTCGAA 1 cut(s) 226
BsrI ACTGG 1 cut(s) 511
BssECI CCNNGG 3 cut(s) 116, 188, 278
BssMI GATC 3 cut(s) 24, 184, 328
BssT1I CCWWGG 2 cut(s) 188, 278
Bst2UI CCWGG 1 cut(s) 351
Bst4CI ACNGT 2 cut(s) 437, 588
BstBI TTCGAA 1 cut(s) 226
BstC8I GCNNGC 1 cut(s) 78
BstDEI CTNAG 2 cut(s) 313, 332
BstDSI CCRYGG 2 cut(s) 116, 278
BstF5I GGATG 3 cut(s) 126, 288, 549
BstKTI GATC 3 cut(s) 27, 187, 331
BstMAI GTCTC 3 cut(s) 118, 280, 474
BstMBI GATC 3 cut(s) 24, 184, 328
BstMWI GCNNNNNNNGC 1 cut(s) 245
BstNI CCWGG 1 cut(s) 351
BstSCI CCNGG 1 cut(s) 349
BstV1I GCAGC 2 cut(s) 253, 275
BstV2I GAAGAC 2 cut(s) 11, 171
BstX2I RGATCY 3 cut(s) 24, 184, 328
BstYI RGATCY 3 cut(s) 24, 184, 328
BsuRI GGCC 2 cut(s) 115, 277
BtgI CCRYGG 2 cut(s) 116, 278
BtsCI GGATG 3 cut(s) 126, 288, 549
Cac8I GCNNGC 1 cut(s) 78
CaiI CAGNNNCTG 1 cut(s) 133
CseI GACGC 2 cut(s) 83, 245
Csp6I GTAC 1 cut(s) 438
CviAII CATG 3 cut(s) 260, 279, 527
CviQI GTAC 1 cut(s) 438
DdeI CTNAG 2 cut(s) 313, 332
DpnI GATC 3 cut(s) 26, 186, 330
DpnII GATC 3 cut(s) 24, 184, 328
Eco130I CCWWGG 2 cut(s) 188, 278
Eco57I CTGAAG 2 cut(s) 66, 228
EcoRII CCWGG 1 cut(s) 349
EcoT14I CCWWGG 2 cut(s) 188, 278
ErhI CCWWGG 2 cut(s) 188, 278
FaeI CATG 3 cut(s) 263, 282, 530
FaiI YATR 9 cut(s) 47, 207, 261, 280, 528, 596, 621, 623, 628
FaqI GGGAC 1 cut(s) 512
FatI CATG 3 cut(s) 259, 278, 526
Fnu4HI GCNGC 3 cut(s) 240, 264, 267
FokI GGATG 3 cut(s) 133, 295, 556
Fsp4HI GCNGC 3 cut(s) 240, 264, 267
FspBI CTAG 2 cut(s) 486, 572
GluI GCNGC 3 cut(s) 240, 264, 267
HaeIII GGCC 2 cut(s) 115, 277
HgaI GACGC 2 cut(s) 83, 245
Hin1II CATG 3 cut(s) 263, 282, 530
HinfI GANTC 4 cut(s) 30, 371, 482, 575
Hpy188I TCNGA 5 cut(s) 29, 328, 408, 462, 641
Hpy188III TCNNGA 5 cut(s) 34, 428, 486, 541, 572
HpyAV CCTTC 1 cut(s) 7
HpyCH4III ACNGT 2 cut(s) 437, 588
HpyCH4V TGCA 3 cut(s) 263, 389, 547
HpyF10VI GCNNNNNNNGC 1 cut(s) 245
HpyF3I CTNAG 2 cut(s) 313, 332
Hsp92II CATG 3 cut(s) 263, 282, 530
Kzo9I GATC 3 cut(s) 24, 184, 328
Lsp1109I GCAGC 2 cut(s) 253, 275
LweI GCATC 1 cut(s) 534
MaeI CTAG 2 cut(s) 486, 572
MaeIII GTNAC 1 cut(s) 335
MalI GATC 3 cut(s) 26, 186, 330
MboI GATC 3 cut(s) 24, 184, 328
MboII GAAGA 2 cut(s) 16, 176
MflI RGATCY 3 cut(s) 24, 184, 328
MhlI GDGCHC 1 cut(s) 495
MluCI AATT 5 cut(s) 42, 202, 320, 363, 393
MlyI GAGTC 2 cut(s) 39, 476
MnlI CCTC 1 cut(s) 229
MroXI GAANNNNTTC 3 cut(s) 60, 168, 222
MseI TTAA 1 cut(s) 450
MspA1I CMGCKG 2 cut(s) 104, 266
MspR9I CCNGG 1 cut(s) 351
MvaI CCWGG 1 cut(s) 351
MwoI GCNNNNNNNGC 1 cut(s) 245
NcoI CCATGG 1 cut(s) 278
NdeII GATC 3 cut(s) 24, 184, 328
NlaIII CATG 3 cut(s) 263, 282, 530
NspV TTCGAA 1 cut(s) 226
PdmI GAANNNNTTC 3 cut(s) 60, 168, 222
PfeI GAWTC 2 cut(s) 371, 575
PkrI GCNGC 3 cut(s) 241, 265, 268
PleI GAGTC 2 cut(s) 38, 476
PpsI GAGTC 2 cut(s) 38, 476
Psp6I CCWGG 1 cut(s) 349
PspGI CCWGG 1 cut(s) 349
PstNI CAGNNNCTG 1 cut(s) 133
PsuI RGATCY 3 cut(s) 24, 184, 328
PvuII CAGCTG 2 cut(s) 104, 266
RsaI GTAC 1 cut(s) 439
RsaNI GTAC 1 cut(s) 438
SaqAI TTAA 1 cut(s) 450
SatI GCNGC 3 cut(s) 240, 264, 267
Sau3AI GATC 3 cut(s) 24, 184, 328
SchI GAGTC 2 cut(s) 39, 476
ScrFI CCNGG 1 cut(s) 351
SduI GDGCHC 1 cut(s) 495
SetI ASST 9 cut(s) 78, 88, 106, 250, 268, 294, 352, 470, 518
SfaNI GCATC 1 cut(s) 534
SfuI TTCGAA 1 cut(s) 226
SmlI CTYRAG 2 cut(s) 147, 155
SmoI CTYRAG 2 cut(s) 147, 155
Sse9I AATT 5 cut(s) 42, 202, 320, 363, 393
SsiI CCGC 2 cut(s) 239, 375
SspMI CTAG 2 cut(s) 486, 572
StyD4I CCNGG 1 cut(s) 349
StyI CCWWGG 2 cut(s) 188, 278
TaaI ACNGT 2 cut(s) 437, 588
TaqI TCGA 1 cut(s) 226
TasI AATT 5 cut(s) 42, 202, 320, 363, 393
TatI WGTACW 1 cut(s) 437
TauI GCSGC 1 cut(s) 242
TfiI GAWTC 2 cut(s) 371, 575
Tru1I TTAA 1 cut(s) 450
Tru9I TTAA 1 cut(s) 450
TseI GCWGC 2 cut(s) 263, 266
TspDTI ATGAA 7 cut(s) 17, 69, 177, 231, 333, 359, 567
TspGWI ACGGA 2 cut(s) 133, 354
XapI RAATTY 1 cut(s) 363
XbaI TCTAGA 2 cut(s) 485, 571
XmnI GAANNNNTTC 3 cut(s) 60, 168, 222
XspI CTAG 2 cut(s) 486, 572
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.