Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0007569

Physical Location & Seq

Genomic Coordinates Reverse (-)

74887192 .. 74891920

Gene Structure 4729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021405

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGTCTTCAACAACATCACCTTCTCCAAATTCTTCACCTTCTGCAAACCCACCAACCAGCTCTGATACCCCACCATCATCAAATTCCACAACTACTGCAACCAATGACTCTTCCCCTCCTCCACAGTCATCCTCTTCTCCTCCTCCAGCTGCCTCAGCTGCTCCCCCTCCAGCGTCATCACCGCCCCCACCGGTATCATCACCACCACCTGCTGTAGCATCTCCACCACCAGCTTCACCACCCCCGGCGTCTCCACCTCCATCACCTCCCAAGTCTTCCCCTGCCCCTCCTCCAACGCCTCCTGCTTCACCCCCAGCATCACCTCCAGCAGCATCACCGCCACCTCCAACACCAACTTCCCCTCCTCCGGCGGCACCAGCATCCAATGTATCCCCACCGCCACCATCAGGAGACTCCCCTCCTCCCAAAGCCTCCCCAACACCTCCATCAGAAGCCTCACCACCACCTAAATCCCCTCCTCCGCCAGCTGATGCATCACCGCCTCCATCCAATTCTCCACCACCACCAAAAGCACCAGAAAAGTCTCCTCCCTCCCCCACTGTTACACCACCTCCATCTGGTTCTCAATCTGCTCCGCCACCAGCTGATAACACTCCTCCCAAGTCCACATCACCACCGCCTTCAGTTCCCTCGTCGTCGTCTTCCCCTCCTGCTGTTTCTCCTCCTGCTCCGCCCAGTAATTCATCAACTCCTACTCCCTCAGGCTTGCCTGCTATTCCGACACCGAAACCAACTGCAAAGTCAACTAATGATGCCAATGTAACGGCAAATGCTACACCTGGAAACACAAAAGGGTTAAACACTGGAGGAGCTGTGGCAATTGGAATTGTGGTTGGGGTGCTGGTGCTCAGTCTTGTTGTGATGGCTGTGTGGTTCACTAAGAAGAAGAAGAGAAAAAGTGGGTCGAATCTTTACACCATGCCTTCTCCCTTTGCTTCATCCCAGAATTCAGATTCCGTATTTTTGAGGCCCCATTCTCCAGCCCCCCTTGTAGGAAATGGTTCTGGTAAAGAATTCATGTATGCACAATCAGAGTCTGGAGCAAGCAATTCAAGATCATGGTTCACATATGAAGAACTGATCCAAGCCACAAATGGATTTTCGACACAGAATCTTTTGGGTGAAGGGGGATTTGGTTGTGTATACAAAGGTATCCTGGAAGATGGAAGAGAAGTTGCTGTTAAACAGCTAAAAATTGGTGGTGGACAAGGGGAACGCGAGTTCCGAGCTGAAGTTGAAATCATCAGTCGAGTACACCATCGCCATTTGGTTTCCCTGGTGGGTTACTGTATATCTGAGCATCAAAGGTTGCTTGTCTACGACTTTGTTCCAAACGATACCCTTCATTACCATCTTCATGGTCAGGACATGCCGGTTATGGATTGGGCAACTAGAGTCAAAGTTGCTGCTGGTGCAGCTCGTGGGATAGCTTACTTACATGAAGATTGCCATCCTCGCATTATTCATAGAGATATCAAGTCATCAAACATCCTTCTGGATAGCAACTTTGAAGCTCAGCCTGTAACATGGTTGTATTCTAGTCTGCTGCTCATGGAATGCCGACATGGTTTTCTTACATTGCCCTTGGCAGCTAGAGCTCATTCTTGCAGTCTCAAATTATACATGGCTCCAGAATATGCAACAAGTGGAAAGTTGACAGATAAGTCTGATGTTTATTCTTATGGTGTTGTACTATTGGAGTTGATTACTGGTCGCAAGCCTGTGGATGGCTCTCAGCCATTGGGTGATGAGAGCCTTGTTGAATGGTCTGTTTCTCCAAAAGGGCAAAAGTTGTATACCACTCTTGATAGCTATGGAAAAGTTACTCTGCCACTTGCAGTAATCAAATGTTGTGGTTGTCTACAGTATCTAGAGCATGCACCTTCTAGCATAGTGGTAAGGGCTTTAGACTCCTTGGATGATACCTCAGATCTCAGTAACGGAATGAAACCTGGCCAGAGTGAAGTTTTTAATTCCGCAGATCAATCTGCACAAATTAGAATGTTCCAAAGAATGGCATTTGGTAGTCAGGATTACAGTACGAGTTACTTTAATCAAAGTCAGAGTAGCTGGAAAAGTAGAGATAACGGGGACCAAACTCGAAGTAGCTGGAATAGAGATCAGCGGGACCAGAGTAGAGAGCACGGGGACCAAAATCGAAGTACCTGGAGTAGAGACCAGAGAGACCAGGATACCGCAACACCCATAGATAGATCTGGAGTATGGAACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

752

Amino Acids

78.79

Weight (kDa)

6.95

Isoelectric Point (pI)

77.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	375 - 585	2.4e-33	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	376 - 585	1.7e-33	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007569)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38560
fragaria_vesca	FvH4_6g45530 FvH4_6g45530 FvH4_6g45530 FvH4_6g45530
malus_domestica	MD09G1081800.v1.1 MD09G1082000.v1.1 MD17G1072800.v1.1
prunus_persica	Prupe.3G241100_v2.0.a1 Prupe.3G241800_v2.0.a1
pyrus_communis	pycom09g00850 pycom17g07370
rosa_chinensis	RchiOBHm_Chr2g0163481
rosa_laevigata	RLG00000021405
rosa_multiflora	Rmu_ssc0000335.1_g000004
rosa_roxburghii	Rroxscaffold_2G00087280
rosa_rugosa	Rorug02G0503100 Rorug02G0503200 Rorug02G0503300
rosa_samantha	Rh2AG570100 Rh2BG582300 Rh2CG552100 Rh2DG592100
rosa_wichuraiana	Rw2G047200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	217
AasI	GACNNNNNNGTC	1 cut(s)	1684
Acc36I	ACCTGC	1 cut(s)	217
AccB1I	GGYRCC	1 cut(s)	373
AccB7I	CCANNNNNTGG	1 cut(s)	2035
AccI	GTMKAC	4 cut(s)	1164, 1338, 1817, 1882
AccII	CGCG	1 cut(s)	1239
AclWI	GGATC	1 cut(s)	1096
AcoI	YGGCCR	1 cut(s)	1975
AcsI	RAATTY	4 cut(s)	28, 82, 967, 1034
AcuI	CTGAAG	2 cut(s)	627, 1272
AcyI	GRCGYC	1 cut(s)	248
AfaI	GTAC	4 cut(s)	1275, 1713, 2062, 2185
AfiI	CCNNNNNNNGG	6 cut(s)	367, 407, 578, 1013, 1748, 2035
AgeI	ACCGGT	1 cut(s)	190
AgsI	TTSAA	5 cut(s)	9, 1074, 1259, 1532, 1784
AjnI	CCWGG	6 cut(s)	799, 1176, 1296, 1972, 2186, 2208
AjuI	GAANNNNNNNTTGG	4 cut(s)	340, 372, 1137, 1169
AloI	GAACNNNNNNTCC	4 cut(s)	1226, 1227, 1258, 1259
Alw21I	GWGCWC	3 cut(s)	870, 1621, 2166
Alw26I	GTCTC	6 cut(s)	255, 405, 549, 1637, 2190, 2199
AlwI	GGATC	1 cut(s)	1096
AlwNI	CAGNNNCTG	1 cut(s)	1058
AoxI	GGCC	2 cut(s)	989, 1975
ApeKI	GCWGC	7 cut(s)	149, 158, 329, 1427, 1436, 1567, 1610
ApoI	RAATTY	4 cut(s)	28, 82, 967, 1034
AsiGI	ACCGGT	1 cut(s)	190
Asp700I	GAANNNNTTC	1 cut(s)	1021
AspS9I	GGNCC	4 cut(s)	990, 2113, 2149, 2170
AsuC2I	CCSGG	1 cut(s)	245
AvaII	GGWCC	3 cut(s)	2113, 2149, 2170
AxyI	CCTNAGG	1 cut(s)	721
BaeI	ACNNNNGTAYC	2 cut(s)	1156, 1189
BalI	TGGCCA	1 cut(s)	1977
BanI	GGYRCC	1 cut(s)	373
BanII	GRGCYC	1 cut(s)	1621
BauI	CACGAG	1 cut(s)	1440
BbsI	GAAGAC	2 cut(s)	267, 654
Bbv12I	GWGCWC	3 cut(s)	870, 1621, 2166
BbvCI	CCTCAGC	1 cut(s)	154
BbvI	GCAGC	7 cut(s)	136, 145, 341, 1414, 1448, 1554, 1622
BceAI	ACGGC	1 cut(s)	801
BciT130I	CCWGG	6 cut(s)	801, 1178, 1298, 1974, 2188, 2210
BciVI	GTATCC	3 cut(s)	400, 1184, 2206
BcnI	CCSGG	1 cut(s)	245
BcoDI	GTCTC	6 cut(s)	255, 405, 549, 1637, 2190, 2199
BfaI	CTAG	5 cut(s)	1413, 1560, 1614, 1892, 1908
BfmI	CTRYAG	2 cut(s)	213, 1883
BfuAI	ACCTGC	1 cut(s)	217
BfuI	GTATCC	3 cut(s)	400, 1184, 2206
BglII	AGATCT	2 cut(s)	1951, 2234
BisI	GCNGC	8 cut(s)	150, 159, 330, 372, 1428, 1437, 1568, 1611
BlpI	GCTNAGC	1 cut(s)	1536
BlsI	GCNGC	8 cut(s)	151, 160, 331, 373, 1429, 1438, 1569, 1612
Bme1390I	CCNGG	7 cut(s)	245, 801, 1178, 1298, 1974, 2188, 2210
Bme18I	GGWCC	3 cut(s)	2113, 2149, 2170
BmgT120I	GGNCC	4 cut(s)	990, 2113, 2149, 2170
BmiI	GGNNCC	6 cut(s)	375, 992, 1650, 2114, 2150, 2171
BmrFI	CCNGG	7 cut(s)	245, 801, 1178, 1298, 1974, 2188, 2210
BmrI	ACTGGG	1 cut(s)	690
BmsI	GCATC	8 cut(s)	227, 326, 341, 389, 481, 503, 763, 1330
BmuI	ACTGGG	1 cut(s)	690
BpiI	GAAGAC	2 cut(s)	267, 654
BpmI	CTGGAG	8 cut(s)	129, 153, 309, 846, 984, 1080, 1635, 2209
Bpu10I	CCTNAGC	1 cut(s)	154
Bpu1102I	GCTNAGC	1 cut(s)	1536
BpuMI	CCSGG	1 cut(s)	245
BsaBI	GATNNNNATC	1 cut(s)	1470
BsaHI	GRCGYC	1 cut(s)	248
BsaI	GGTCTC	2 cut(s)	2190, 2199
BsaJI	CCNNGG	4 cut(s)	243, 1296, 1605, 1935
BsaWI	WCCGGW	1 cut(s)	190
BsaXI	ACNNNNNCTCC	8 cut(s)	346, 376, 556, 586, 700, 730, 819, 849
Bsc4I	CCNNNNNNNGG	6 cut(s)	367, 407, 578, 1013, 1748, 2035
Bse118I	RCCGGY	2 cut(s)	190, 1393
Bse1I	ACTGG	3 cut(s)	696, 829, 1735
Bse21I	CCTNAGG	1 cut(s)	721
Bse3DI	GCAATG	1 cut(s)	1598
Bse8I	GATNNNNATC	1 cut(s)	1470
BseBI	CCWGG	6 cut(s)	801, 1178, 1298, 1974, 2188, 2210
BseDI	CCNNGG	4 cut(s)	243, 1296, 1605, 1935
BseGI	GGATG	8 cut(s)	128, 380, 506, 959, 1471, 1509, 1753, 1945
BseJI	GATNNNNATC	1 cut(s)	1470
BseLI	CCNNNNNNNGG	6 cut(s)	367, 407, 578, 1013, 1748, 2035
BseMI	GCAATG	1 cut(s)	1598
BseMII	CTCAG	8 cut(s)	168, 735, 883, 1308, 1550, 1769, 1962, 1969
BseNI	ACTGG	3 cut(s)	696, 829, 1735
BseXI	GCAGC	7 cut(s)	136, 145, 341, 1414, 1448, 1554, 1622
BseYI	CCCAGC	1 cut(s)	313
BsgI	GTGCAG	2 cut(s)	1455, 1995
Bsh1236I	CGCG	1 cut(s)	1239
BshFI	GGCC	2 cut(s)	991, 1977
BshNI	GGYRCC	1 cut(s)	373
BshTI	ACCGGT	1 cut(s)	190
BsiHKAI	GWGCWC	3 cut(s)	870, 1621, 2166
BsiSI	CCGG	4 cut(s)	191, 245, 368, 1394
BslFI	GGGAC	3 cut(s)	2126, 2162, 2183
BslI	CCNNNNNNNGG	6 cut(s)	367, 407, 578, 1013, 1748, 2035
BsmAI	GTCTC	6 cut(s)	255, 405, 549, 1637, 2190, 2199
BsmBI	CGTCTC	1 cut(s)	255
BsmFI	GGGAC	3 cut(s)	2126, 2162, 2183
BsmI	GAATGC	1 cut(s)	1583
BsnI	GGCC	2 cut(s)	991, 1977
Bso31I	GGTCTC	2 cut(s)	2190, 2199
Bsp1286I	GDGCHC	3 cut(s)	870, 1621, 2166
Bsp143I	GATC	6 cut(s)	1076, 1101, 1951, 2002, 2140, 2234
Bsp1720I	GCTNAGC	1 cut(s)	1536
BspANI	GGCC	2 cut(s)	991, 1977
BspCNI	CTCAG	8 cut(s)	167, 734, 882, 1309, 1549, 1768, 1961, 1968
BspFNI	CGCG	1 cut(s)	1239
BspLI	GGNNCC	6 cut(s)	375, 992, 1650, 2114, 2150, 2171
BspMI	ACCTGC	1 cut(s)	217
BspPI	GGATC	1 cut(s)	1096
BspT107I	GGYRCC	1 cut(s)	373
BspTNI	GGTCTC	2 cut(s)	2190, 2199
BsrDI	GCAATG	1 cut(s)	1598
BsrFI	RCCGGY	2 cut(s)	190, 1393
BsrI	ACTGG	3 cut(s)	696, 829, 1735
BssAI	RCCGGY	2 cut(s)	190, 1393
BssECI	CCNNGG	4 cut(s)	243, 1296, 1605, 1935
BssMI	GATC	6 cut(s)	1076, 1101, 1951, 2002, 2140, 2234
BssNAI	GTATAC	2 cut(s)	1165, 1818
BssNI	GRCGYC	1 cut(s)	248
BssSI	CACGAG	1 cut(s)	1440
BssT1I	CCWWGG	2 cut(s)	1605, 1935
Bst1107I	GTATAC	2 cut(s)	1165, 1818
Bst2BI	CACGAG	1 cut(s)	1440
Bst2UI	CCWGG	6 cut(s)	801, 1178, 1298, 1974, 2188, 2210
Bst4CI	ACNGT	5 cut(s)	126, 562, 1310, 1887, 2060
Bst6I	CTCTTC	4 cut(s)	115, 139, 905, 1183
BstACI	GRCGYC	1 cut(s)	248
BstC8I	GCNNGC	6 cut(s)	486, 728, 732, 1066, 1739, 1899
BstDEI	CTNAG	9 cut(s)	154, 721, 869, 900, 1317, 1536, 1755, 1948, 1955
BstF5I	GGATG	8 cut(s)	128, 380, 506, 959, 1471, 1509, 1753, 1945
BstFNI	CGCG	1 cut(s)	1239
BstKTI	GATC	6 cut(s)	1079, 1104, 1954, 2005, 2143, 2237
BstMAI	GTCTC	6 cut(s)	255, 405, 549, 1637, 2190, 2199
BstMBI	GATC	6 cut(s)	1076, 1101, 1951, 2002, 2140, 2234
BstMWI	GCNNNNNNNGC	7 cut(s)	155, 158, 377, 1433, 1436, 1476, 1616
BstNI	CCWGG	6 cut(s)	801, 1178, 1298, 1974, 2188, 2210
BstNSI	RCATGY	2 cut(s)	1393, 1901
BstSCI	CCNGG	7 cut(s)	243, 799, 1176, 1296, 1972, 2186, 2208
BstSFI	CTRYAG	2 cut(s)	213, 1883
BstUI	CGCG	1 cut(s)	1239
BstV1I	GCAGC	7 cut(s)	136, 145, 341, 1414, 1448, 1554, 1622
BstV2I	GAAGAC	2 cut(s)	267, 654
BstX2I	RGATCY	2 cut(s)	1951, 2234
BstXI	CCANNNNNNTGG	1 cut(s)	1379
BstYI	RGATCY	2 cut(s)	1951, 2234
BstZ17I	GTATAC	2 cut(s)	1165, 1818
Bsu36I	CCTNAGG	1 cut(s)	721
BsuI	GTATCC	3 cut(s)	400, 1184, 2206
BsuRI	GGCC	2 cut(s)	991, 1977
BtgZI	GCGATG	1 cut(s)	1265
BtsCI	GGATG	8 cut(s)	128, 380, 506, 959, 1471, 1509, 1753, 1945
BtsIMutI	CAGTG	2 cut(s)	558, 822
BveI	ACCTGC	1 cut(s)	217
Cac8I	GCNNGC	6 cut(s)	486, 728, 732, 1066, 1739, 1899
CaiI	CAGNNNCTG	1 cut(s)	1058
Cfr10I	RCCGGY	2 cut(s)	190, 1393
Cfr13I	GGNCC	4 cut(s)	990, 2113, 2149, 2170
CseI	GACGC	2 cut(s)	162, 237
Csp6I	GTAC	4 cut(s)	1274, 1712, 2061, 2184
CspAI	ACCGGT	1 cut(s)	190
CspCI	CAANNNNNGTGG	2 cut(s)	1855, 1890
CviQI	GTAC	4 cut(s)	1274, 1712, 2061, 2184
DdeI	CTNAG	9 cut(s)	154, 721, 869, 900, 1317, 1536, 1755, 1948, 1955
DpnI	GATC	6 cut(s)	1078, 1103, 1953, 2004, 2142, 2236
DpnII	GATC	6 cut(s)	1076, 1101, 1951, 2002, 2140, 2234
DrdI	GACNNNNNNGTC	1 cut(s)	1684
DseDI	GACNNNNNNGTC	1 cut(s)	1684
EaeI	YGGCCR	1 cut(s)	1975
Eam1104I	CTCTTC	4 cut(s)	115, 139, 905, 1183
EarI	CTCTTC	4 cut(s)	115, 139, 905, 1183
EciI	GGCGGA	3 cut(s)	471, 585, 681
Ecl136II	GAGCTC	1 cut(s)	1619
Eco130I	CCWWGG	2 cut(s)	1605, 1935
Eco24I	GRGCYC	1 cut(s)	1621
Eco31I	GGTCTC	2 cut(s)	2190, 2199
Eco32I	GATATC	1 cut(s)	1495
Eco47I	GGWCC	3 cut(s)	2113, 2149, 2170
Eco53kI	GAGCTC	1 cut(s)	1619
Eco57I	CTGAAG	2 cut(s)	627, 1272
Eco81I	CCTNAGG	1 cut(s)	721
EcoICRI	GAGCTC	1 cut(s)	1619
EcoO109I	RGGNCCY	1 cut(s)	990
EcoRI	GAATTC	2 cut(s)	967, 1034
EcoRII	CCWGG	6 cut(s)	799, 1176, 1296, 1972, 2186, 2208
EcoRV	GATATC	1 cut(s)	1495
EcoT14I	CCWWGG	2 cut(s)	1605, 1935
EcoT22I	ATGCAT	1 cut(s)	496
EcoT38I	GRGCYC	1 cut(s)	1621
ErhI	CCWWGG	2 cut(s)	1605, 1935
Esp3I	CGTCTC	1 cut(s)	255
FaqI	GGGAC	3 cut(s)	2126, 2162, 2183
FauI	CCCGC	1 cut(s)	2139
FauNDI	CATATG	1 cut(s)	1090
FblI	GTMKAC	4 cut(s)	1164, 1338, 1817, 1882
Fnu4HI	GCNGC	8 cut(s)	150, 159, 330, 372, 1428, 1437, 1568, 1611
FokI	GGATG	8 cut(s)	115, 367, 493, 946, 1458, 1496, 1760, 1952
FriOI	GRGCYC	1 cut(s)	1621
Fsp4HI	GCNGC	8 cut(s)	150, 159, 330, 372, 1428, 1437, 1568, 1611
FspBI	CTAG	5 cut(s)	1413, 1560, 1614, 1892, 1908
GluI	GCNGC	8 cut(s)	150, 159, 330, 372, 1428, 1437, 1568, 1611
GsaI	CCCAGC	1 cut(s)	317
GsuI	CTGGAG	8 cut(s)	129, 153, 309, 846, 984, 1080, 1635, 2209
HaeIII	GGCC	2 cut(s)	991, 1977
HapII	CCGG	4 cut(s)	191, 245, 368, 1394
HgaI	GACGC	2 cut(s)	162, 237
Hin1I	GRCGYC	1 cut(s)	248
HincII	GTYRAC	2 cut(s)	765, 1677
HindII	GTYRAC	2 cut(s)	765, 1677
HinfI	GANTC	8 cut(s)	107, 413, 928, 974, 1055, 1132, 1416, 1931
HpaII	CCGG	4 cut(s)	191, 245, 368, 1394
Hpy99I	CGWCG	2 cut(s)	658, 661
HpyAV	CCTTC	8 cut(s)	30, 48, 651, 954, 1139, 1373, 1523, 1914
HpyCH4III	ACNGT	5 cut(s)	126, 562, 1310, 1887, 2060
HpyF10VI	GCNNNNNNNGC	7 cut(s)	155, 158, 377, 1433, 1436, 1476, 1616
HpyF3I	CTNAG	9 cut(s)	154, 721, 869, 900, 1317, 1536, 1755, 1948, 1955
Hsp92I	GRCGYC	1 cut(s)	248
Kzo9I	GATC	6 cut(s)	1076, 1101, 1951, 2002, 2140, 2234
LmnI	GCTCC	6 cut(s)	166, 598, 694, 830, 1061, 1654
Lsp1109I	GCAGC	7 cut(s)	136, 145, 341, 1414, 1448, 1554, 1622
LweI	GCATC	8 cut(s)	227, 326, 341, 389, 481, 503, 763, 1330
MaeI	CTAG	5 cut(s)	1413, 1560, 1614, 1892, 1908
MaeIII	GTNAC	7 cut(s)	562, 781, 1304, 1543, 1843, 1958, 2066
MalI	GATC	6 cut(s)	1078, 1103, 1953, 2004, 2142, 2236
MboI	GATC	6 cut(s)	1076, 1101, 1951, 2002, 2140, 2234
MfeI	CAATTG	1 cut(s)	840
MflI	RGATCY	2 cut(s)	1951, 2234
MhlI	GDGCHC	3 cut(s)	870, 1621, 2166
MlsI	TGGCCA	1 cut(s)	1977
MluNI	TGGCCA	1 cut(s)	1977
MlyI	GAGTC	5 cut(s)	101, 407, 1064, 1425, 1925
MmeI	TCCRAC	3 cut(s)	317, 371, 764
Mox20I	TGGCCA	1 cut(s)	1977
Mph1103I	ATGCAT	1 cut(s)	496
MroXI	GAANNNNTTC	1 cut(s)	1021
MscI	TGGCCA	1 cut(s)	1977
MseI	TTAA	4 cut(s)	818, 1203, 1992, 2073
MslI	CAYNNNNRTG	1 cut(s)	1377
Msp20I	TGGCCA	1 cut(s)	1977
MspA1I	CMGCKG	5 cut(s)	149, 158, 488, 605, 2146
MspI	CCGG	4 cut(s)	191, 245, 368, 1394
MspR9I	CCNGG	7 cut(s)	245, 801, 1178, 1298, 1974, 2188, 2210
MunI	CAATTG	1 cut(s)	840
Mva1269I	GAATGC	1 cut(s)	1583
MvaI	CCWGG	6 cut(s)	801, 1178, 1298, 1974, 2188, 2210
MvnI	CGCG	1 cut(s)	1239
MwoI	GCNNNNNNNGC	7 cut(s)	155, 158, 377, 1433, 1436, 1476, 1616
NciI	CCSGG	1 cut(s)	245
NdeI	CATATG	1 cut(s)	1090
NdeII	GATC	6 cut(s)	1076, 1101, 1951, 2002, 2140, 2234
NlaIV	GGNNCC	6 cut(s)	375, 992, 1650, 2114, 2150, 2171
NsiI	ATGCAT	1 cut(s)	496
NspI	RCATGY	2 cut(s)	1393, 1901
PaeI	GCATGC	1 cut(s)	1901
PaqCI	CACCTGC	1 cut(s)	217
PcsI	WCGNNNNNNNCGW	1 cut(s)	1243
PctI	GAATGC	1 cut(s)	1583
PdmI	GAANNNNTTC	1 cut(s)	1021
PfeI	GAWTC	3 cut(s)	928, 974, 1132
PflMI	CCANNNNNTGG	1 cut(s)	2035
PfoI	TCCNGGA	1 cut(s)	1176
PinAI	ACCGGT	1 cut(s)	190
PkrI	GCNGC	8 cut(s)	151, 160, 331, 373, 1429, 1438, 1569, 1612
PleI	GAGTC	5 cut(s)	101, 407, 1063, 1424, 1925
PpsI	GAGTC	5 cut(s)	101, 407, 1063, 1424, 1925
Psp124BI	GAGCTC	1 cut(s)	1621
Psp6I	CCWGG	6 cut(s)	799, 1176, 1296, 1972, 2186, 2208
PspFI	CCCAGC	1 cut(s)	313
PspGI	CCWGG	6 cut(s)	799, 1176, 1296, 1972, 2186, 2208
PspN4I	GGNNCC	6 cut(s)	375, 992, 1650, 2114, 2150, 2171
PspPI	GGNCC	4 cut(s)	990, 2113, 2149, 2170
PstNI	CAGNNNCTG	1 cut(s)	1058
PsuI	RGATCY	2 cut(s)	1951, 2234
PvuII	CAGCTG	4 cut(s)	149, 158, 488, 605
RsaI	GTAC	4 cut(s)	1275, 1713, 2062, 2185
RsaNI	GTAC	4 cut(s)	1274, 1712, 2061, 2184
RseI	CAYNNNNRTG	1 cut(s)	1377
SacI	GAGCTC	1 cut(s)	1621
SaqAI	TTAA	4 cut(s)	818, 1203, 1992, 2073
SatI	GCNGC	8 cut(s)	150, 159, 330, 372, 1428, 1437, 1568, 1611
Sau3AI	GATC	6 cut(s)	1076, 1101, 1951, 2002, 2140, 2234
Sau96I	GGNCC	4 cut(s)	990, 2113, 2149, 2170
SchI	GAGTC	5 cut(s)	101, 407, 1064, 1425, 1925
ScrFI	CCNGG	7 cut(s)	245, 801, 1178, 1298, 1974, 2188, 2210
SduI	GDGCHC	3 cut(s)	870, 1621, 2166
SfaNI	GCATC	8 cut(s)	227, 326, 341, 389, 481, 503, 763, 1330
SfcI	CTRYAG	2 cut(s)	213, 1883
SinI	GGWCC	3 cut(s)	2113, 2149, 2170
SmiMI	CAYNNNNRTG	1 cut(s)	1377
SphI	GCATGC	1 cut(s)	1901
SspMI	CTAG	5 cut(s)	1413, 1560, 1614, 1892, 1908
SstI	GAGCTC	1 cut(s)	1621
StyD4I	CCNGG	7 cut(s)	243, 799, 1176, 1296, 1972, 2186, 2208
StyI	CCWWGG	2 cut(s)	1605, 1935
TaaI	ACNGT	5 cut(s)	126, 562, 1310, 1887, 2060
TaqI	TCGA	5 cut(s)	926, 1124, 1270, 2122, 2179
TatI	WGTACW	2 cut(s)	1273, 1711
TauI	GCSGC	1 cut(s)	374
TfiI	GAWTC	3 cut(s)	928, 974, 1132
Tru1I	TTAA	4 cut(s)	818, 1203, 1992, 2073
Tru9I	TTAA	4 cut(s)	818, 1203, 1992, 2073
TscAI	CASTG	2 cut(s)	565, 829
TseI	GCWGC	7 cut(s)	149, 158, 329, 1427, 1436, 1567, 1610
TspDTI	ATGAA	9 cut(s)	693, 948, 1027, 1107, 1355, 1367, 1475, 1476, 1982
TspGWI	ACGGA	2 cut(s)	967, 1977
TspRI	CASTG	2 cut(s)	565, 829
Van91I	CCANNNNNTGG	1 cut(s)	2035
VpaK11BI	GGWCC	3 cut(s)	2113, 2149, 2170
XapI	RAATTY	4 cut(s)	28, 82, 967, 1034
XbaI	TCTAGA	1 cut(s)	1891
XceI	RCATGY	2 cut(s)	1393, 1901
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1112
XmiI	GTMKAC	4 cut(s)	1164, 1338, 1817, 1882
XmnI	GAANNNNTTC	1 cut(s)	1021
XspI	CTAG	5 cut(s)	1413, 1560, 1614, 1892, 1908
Zsp2I	ATGCAT	1 cut(s)	496

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.