Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007569

Physical Location & Seq

Genomic Coordinates Reverse (-)

78959491 .. 78965114

Gene Structure 5624 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53165

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2205 bp

ATGTCTTCAACAACCTCACCTTCTCCAAATTCTTCACCTTCTGCAAACCCACCAACCAGCTCTGATACCCCACCATCATCAAATTCCACAACTCCACAGTCCTCTCCTCCTCCTCCTCCTCCTCCAGCTGCCTCAGCTGCTCCCCCTCCAGTGTCATCACCGCCCCCACCGGTATCATCACCACCGCCTGCTGTAGCATCTCCACCACCAGCCTCACCACCCCCGGCGTCTCCACCTCCATCACCTCCTAAGTCTTCCCCTGCCCCTCCTCCAACGCCTCCTGCTTCACCCCCAGCATCACCTCCAGCAGCATCACCGCCACCTCCAACACCAACTTCCCCTCCTCCGGCGGCACCAGCATCCAATGTATCCCCACCGCCACCATCAGGAGACTCCCCTCCTCCCAAAGCCTCACCGCCACCTAAATCCCCTCCTCCTGCAGCTGATGCATCACCGCCTTCATCCACTTCTCCACCGCCACCAAAAGCACCAGAGAAGTCTCCTCCCTCCCCCACTGTTACACCACCTCCATCTGGTTCTCAGTCTTCTCCGCCACCAGCTGATAACACCCCTCCCAAGTCCACATCACCGCCGCCTTCAGTTCCCTCATCGTCGTCTTCCCCTCCTGCTCCGCCCACTAATTCATCAGCTCCTGCTCCCTCAGGCTTGCCTGCTATCCCGACACAGAAACCAACTGCAAAGTCAACTAATGATGCCAATGTAACGGCAAATGCCACACCTGGAAACACAAAAGTTAACACTGGAGGAGCTGTGGCAATTGGAATTGTGGTTGGGGTGCTGGTGCTCAGTCTTGTTGTGATGGCCGTGTGGTTCACCAAGAAGAAGAAGAGAAAAAGTGGGTCGAATCTTTACACCATGCCTTCTCCCTTTGCTTCATCCCAGAATTCAGATTCCGTATTTTTGAGGCCCCATTCTCCAGCCCCCCTTGTAGGAAATGGTTCTGGTAAAGAATTCATGTATGCACAATCAGAGTCTGGAGCAAGCAATTCAAGATCATGGTTCACATATGAAGAACTGATCCAAGCCACAAATGGATTTTCGAAACAGAATCTTTTGGGTGAAGGGGGATTTGGTTGTGTGTACAAAGGTATCCTGGAAGATGGAAGAGAAGTTGCTGTTAAACAGCTAAAAATTGGTGGCGGACAAGGGGAACGTGAGTTCCGAGCTGAAGTTGAAATTATCAGTCGAGTACACCATCGCCATTTGGTTTCCCTGGTGGGTTACTGTATATCTGAGCATCAAAGGTTGCTTGTCTACGACTTTGTTCCAAACGATACCCTTCATTACCATCTTCATGGTCAGGATATGCCGATTATGGATTGGGCAACTAGAGTCAAAGTTGCTGCTGGTGCAGCTCGTGGGATAGCTTACTTACATGAAGATTGCCATCCTCGCATTATTCATAGAGATATCAAGTCATCAAACATACTTCTGGATAGCAATTTTGAAGCTCAGGTTGCAGATTTTGGGCTTGCAAAGCTAGCATTGGATACAAATACACATGTAACCACACGAGTCATGGGAACATTTGGATACATGGCTCCAGAATATGCAACAAGTGGAAAGTTGACAGATAAGTCTGATGTTTATTCTTATGGCGTTGTACTTTTGGAGCTGATTACTGGTCGCAAGCCTGTGGATGGCTCTCAGCCATTGGGTGATGAGAGCCTTGTTGAATGGGCTCGACCTTTGCTCACTGACGCAGTTGAAACTGGAGATTTTAGTGAGTTGGCAGATCCAAGGCTGGAAGAGAATTATGTTGAGAATGAAATGTTTCGAATGATTGAGGCGGCTTCAGCTTGTGTGCGTCATTCAGCTACTAAAAGGCCACGAATGAGACAGGTGGTCAGGGCTTTAGACTCCTTGGATGATACCTCAGATCTCAGTAACGGAATGAAACCTGGCCAGAGTGAAGTTTTTAATTCCGCAGATCAATCTGCACAAATTAGAATGTTCCAAAGAATGGCGTTTGGTAGTCAGGATTACAGTACGAGTTACTTTAATCAAAGTCAGAGTAGCTGGAAAAGTAGAGATAACGGGGACCAAACTCGAAGTAGCTGGAATAGAGACCAGCGGGACCAGAGTAGAGAGCACGGAGACCAAACTCGGAGTACCTGGAGTAGAGACCAGAGAGACCAGGATACTGTAGTACCGATAGATAGATCTGGAGTATGGAACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

734

Amino Acids

77.49

Weight (kDa)

6.41

Isoelectric Point (pI)

74.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	354 - 560	8.7e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	356 - 626	1.8e-45	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007569)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38560
fragaria_vesca	FvH4_6g45530 FvH4_6g45530 FvH4_6g45530 FvH4_6g45530
malus_domestica	MD09G1081800.v1.1 MD09G1082000.v1.1 MD17G1072800.v1.1
prunus_persica	Prupe.3G241100_v2.0.a1 Prupe.3G241800_v2.0.a1
pyrus_communis	pycom09g00850 pycom17g07370
rosa_chinensis	RchiOBHm_Chr2g0163481
rosa_laevigata	RLG00000021405
rosa_multiflora	Rmu_ssc0000335.1_g000004
rosa_roxburghii	Rroxscaffold_2G00087280
rosa_rugosa	Rorug02G0503100 Rorug02G0503200 Rorug02G0503300
rosa_samantha	Rh2AG570100 Rh2BG582300 Rh2CG552100 Rh2DG592100
rosa_wichuraiana	Rw2G047200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1597
AccB1I	GGYRCC	1 cut(s)	352
AccB7I	CCANNNNNTGG	1 cut(s)	1984
AccI	GTMKAC	1 cut(s)	1275
AclWI	GGATC	2 cut(s)	1033, 1751
AcoI	YGGCCR	2 cut(s)	822, 1924
AcsI	RAATTY	4 cut(s)	28, 82, 904, 971
AcuI	CTGAAG	3 cut(s)	582, 1209, 1800
AcyI	GRCGYC	1 cut(s)	227
AfaI	GTAC	6 cut(s)	1103, 1212, 1626, 2011, 2134, 2172
AfiI	CCNNNNNNNGG	6 cut(s)	346, 386, 533, 950, 1661, 1984
AflIII	ACRYGT	1 cut(s)	1522
AgeI	ACCGGT	1 cut(s)	169
AgsI	TTSAA	6 cut(s)	9, 1011, 1196, 1469, 1697, 1730
AhdI	GACNNNNNGTC	1 cut(s)	1865
AjnI	CCWGG	6 cut(s)	739, 1113, 1233, 1921, 2135, 2157
AjuI	GAANNNNNNNTTGG	4 cut(s)	319, 351, 1074, 1106
AloI	GAACNNNNNNTCC	4 cut(s)	1163, 1164, 1195, 1196
Alw21I	GWGCWC	2 cut(s)	807, 2115
Alw26I	GTCTC	8 cut(s)	234, 384, 504, 1852, 2082, 2112, 2139, 2148
AlwI	GGATC	2 cut(s)	1033, 1751
AlwNI	CAGNNNCTG	2 cut(s)	653, 995
AoxI	GGCC	4 cut(s)	822, 926, 1847, 1924
ApeKI	GCWGC	6 cut(s)	128, 137, 308, 440, 1364, 1373
ApoI	RAATTY	4 cut(s)	28, 82, 904, 971
AsiGI	ACCGGT	1 cut(s)	169
Asp700I	GAANNNNTTC	2 cut(s)	958, 1794
AspS9I	GGNCC	3 cut(s)	927, 2062, 2098
AsuC2I	CCSGG	1 cut(s)	224
AsuII	TTCGAA	2 cut(s)	1061, 1798
AsuNHI	GCTAGC	1 cut(s)	1501
AvaII	GGWCC	2 cut(s)	2062, 2098
AxyI	CCTNAGG	1 cut(s)	661
BaeI	ACNNNNGTAYC	6 cut(s)	1093, 1126, 2154, 2154, 2187, 2187
BalI	TGGCCA	1 cut(s)	1926
BanI	GGYRCC	1 cut(s)	352
BanII	GRGCYC	1 cut(s)	1705
BauI	CACGAG	2 cut(s)	1377, 1533
BbsI	GAAGAC	3 cut(s)	246, 537, 609
Bbv12I	GWGCWC	2 cut(s)	807, 2115
BbvCI	CCTCAGC	1 cut(s)	133
BbvI	GCAGC	6 cut(s)	115, 124, 320, 452, 1351, 1385
BceAI	ACGGC	2 cut(s)	741, 809
BciT130I	CCWGG	6 cut(s)	741, 1115, 1235, 1923, 2137, 2159
BciVI	GTATCC	5 cut(s)	379, 1121, 1504, 1547, 2155
BcnI	CCSGG	1 cut(s)	224
BcoDI	GTCTC	8 cut(s)	234, 384, 504, 1852, 2082, 2112, 2139, 2148
BfaI	CTAG	2 cut(s)	1350, 1502
BfmI	CTRYAG	3 cut(s)	192, 438, 2166
BfuI	GTATCC	5 cut(s)	379, 1121, 1504, 1547, 2155
BglII	AGATCT	2 cut(s)	1900, 2183
BisI	GCNGC	9 cut(s)	129, 138, 309, 351, 441, 593, 1365, 1374, 1812
BlsI	GCNGC	9 cut(s)	130, 139, 310, 352, 442, 594, 1366, 1375, 1813
Bme1390I	CCNGG	7 cut(s)	224, 741, 1115, 1235, 1923, 2137, 2159
Bme18I	GGWCC	2 cut(s)	2062, 2098
BmeRI	GACNNNNNGTC	1 cut(s)	1865
BmgT120I	GGNCC	3 cut(s)	927, 2062, 2098
BmiI	GGNNCC	5 cut(s)	354, 929, 1563, 2063, 2099
BmrFI	CCNGG	7 cut(s)	224, 741, 1115, 1235, 1923, 2137, 2159
BmsI	GCATC	8 cut(s)	206, 305, 320, 368, 436, 458, 703, 1267
BmtI	GCTAGC	1 cut(s)	1505
BpiI	GAAGAC	3 cut(s)	246, 537, 609
BpmI	CTGGAG	9 cut(s)	108, 132, 288, 783, 921, 1017, 1548, 1755, 2158
Bpu10I	CCTNAGC	2 cut(s)	133, 1473
Bpu14I	TTCGAA	2 cut(s)	1061, 1798
BpuMI	CCSGG	1 cut(s)	224
BsaBI	GATNNNNATC	1 cut(s)	1407
BsaHI	GRCGYC	1 cut(s)	227
BsaI	GGTCTC	4 cut(s)	2082, 2112, 2139, 2148
BsaJI	CCNNGG	4 cut(s)	222, 1233, 1760, 1884
BsaWI	WCCGGW	1 cut(s)	169
BsaXI	ACNNNNNCTCC	6 cut(s)	325, 355, 511, 541, 756, 786
Bsc4I	CCNNNNNNNGG	6 cut(s)	346, 386, 533, 950, 1661, 1984
Bse118I	RCCGGY	1 cut(s)	169
Bse1I	ACTGG	4 cut(s)	149, 766, 1648, 1738
Bse21I	CCTNAGG	1 cut(s)	661
Bse8I	GATNNNNATC	1 cut(s)	1407
BseBI	CCWGG	6 cut(s)	741, 1115, 1235, 1923, 2137, 2159
BseDI	CCNNGG	4 cut(s)	222, 1233, 1760, 1884
BseGI	GGATG	6 cut(s)	359, 461, 896, 1408, 1666, 1894
BseJI	GATNNNNATC	1 cut(s)	1407
BseLI	CCNNNNNNNGG	6 cut(s)	346, 386, 533, 950, 1661, 1984
BseMII	CTCAG	9 cut(s)	147, 554, 675, 820, 1245, 1487, 1682, 1911, 1918
BseNI	ACTGG	4 cut(s)	149, 766, 1648, 1738
BseXI	GCAGC	6 cut(s)	115, 124, 320, 452, 1351, 1385
BseYI	CCCAGC	1 cut(s)	292
BsgI	GTGCAG	2 cut(s)	1392, 1944
BshFI	GGCC	4 cut(s)	824, 928, 1849, 1926
BshNI	GGYRCC	1 cut(s)	352
BshTI	ACCGGT	1 cut(s)	169
BsiHKAI	GWGCWC	2 cut(s)	807, 2115
BsiSI	CCGG	3 cut(s)	170, 224, 347
BslFI	GGGAC	2 cut(s)	2075, 2111
BslI	CCNNNNNNNGG	6 cut(s)	346, 386, 533, 950, 1661, 1984
BsmAI	GTCTC	8 cut(s)	234, 384, 504, 1852, 2082, 2112, 2139, 2148
BsmBI	CGTCTC	1 cut(s)	234
BsmFI	GGGAC	2 cut(s)	2075, 2111
BsnI	GGCC	4 cut(s)	824, 928, 1849, 1926
Bso31I	GGTCTC	4 cut(s)	2082, 2112, 2139, 2148
Bsp119I	TTCGAA	2 cut(s)	1061, 1798
Bsp1286I	GDGCHC	3 cut(s)	807, 1705, 2115
Bsp1407I	TGTACA	1 cut(s)	1101
Bsp143I	GATC	6 cut(s)	1013, 1038, 1756, 1900, 1951, 2183
BspANI	GGCC	4 cut(s)	824, 928, 1849, 1926
BspCNI	CTCAG	9 cut(s)	146, 553, 674, 819, 1246, 1486, 1681, 1910, 1917
BspLI	GGNNCC	5 cut(s)	354, 929, 1563, 2063, 2099
BspMAI	CTGCAG	1 cut(s)	442
BspOI	GCTAGC	1 cut(s)	1505
BspPI	GGATC	2 cut(s)	1033, 1751
BspT104I	TTCGAA	2 cut(s)	1061, 1798
BspT107I	GGYRCC	1 cut(s)	352
BspTNI	GGTCTC	4 cut(s)	2082, 2112, 2139, 2148
BsrFI	RCCGGY	1 cut(s)	169
BsrGI	TGTACA	1 cut(s)	1101
BsrI	ACTGG	4 cut(s)	149, 766, 1648, 1738
BssAI	RCCGGY	1 cut(s)	169
BssECI	CCNNGG	4 cut(s)	222, 1233, 1760, 1884
BssMI	GATC	6 cut(s)	1013, 1038, 1756, 1900, 1951, 2183
BssNI	GRCGYC	1 cut(s)	227
BssSI	CACGAG	2 cut(s)	1377, 1533
BssT1I	CCWWGG	2 cut(s)	1760, 1884
Bst2BI	CACGAG	2 cut(s)	1377, 1533
Bst2UI	CCWGG	6 cut(s)	741, 1115, 1235, 1923, 2137, 2159
Bst4CI	ACNGT	5 cut(s)	99, 517, 1247, 2009, 2167
Bst6I	CTCTTC	3 cut(s)	842, 1120, 1764
BstACI	GRCGYC	1 cut(s)	227
BstAPI	GCANNNNNTGC	1 cut(s)	446
BstAUI	TGTACA	1 cut(s)	1101
BstBI	TTCGAA	2 cut(s)	1061, 1798
BstC8I	GCNNGC	7 cut(s)	189, 668, 672, 1003, 1494, 1503, 1652
BstF5I	GGATG	6 cut(s)	359, 461, 896, 1408, 1666, 1894
BstKTI	GATC	6 cut(s)	1016, 1041, 1759, 1903, 1954, 2186
BstMAI	GTCTC	8 cut(s)	234, 384, 504, 1852, 2082, 2112, 2139, 2148
BstMBI	GATC	6 cut(s)	1013, 1038, 1756, 1900, 1951, 2183
BstNI	CCWGG	6 cut(s)	741, 1115, 1235, 1923, 2137, 2159
BstNSI	RCATGY	1 cut(s)	1526
BstSCI	CCNGG	7 cut(s)	222, 739, 1113, 1233, 1921, 2135, 2157
BstSFI	CTRYAG	3 cut(s)	192, 438, 2166
BstV1I	GCAGC	6 cut(s)	115, 124, 320, 452, 1351, 1385
BstV2I	GAAGAC	3 cut(s)	246, 537, 609
BstX2I	RGATCY	3 cut(s)	1756, 1900, 2183
BstXI	CCANNNNNNTGG	1 cut(s)	1316
BstYI	RGATCY	3 cut(s)	1756, 1900, 2183
Bsu36I	CCTNAGG	1 cut(s)	661
BsuI	GTATCC	5 cut(s)	379, 1121, 1504, 1547, 2155
BsuRI	GGCC	4 cut(s)	824, 928, 1849, 1926
BtgZI	GCGATG	1 cut(s)	1202
BtsCI	GGATG	6 cut(s)	359, 461, 896, 1408, 1666, 1894
BtsIMutI	CAGTG	4 cut(s)	156, 513, 759, 1716
Cac8I	GCNNGC	7 cut(s)	189, 668, 672, 1003, 1494, 1503, 1652
CaiI	CAGNNNCTG	2 cut(s)	653, 995
Cfr10I	RCCGGY	1 cut(s)	169
Cfr13I	GGNCC	3 cut(s)	927, 2062, 2098
CseI	GACGC	3 cut(s)	216, 1730, 1817
Csp6I	GTAC	6 cut(s)	1102, 1211, 1625, 2010, 2133, 2171
CspAI	ACCGGT	1 cut(s)	169
CviAII	CATG	8 cut(s)	877, 976, 1017, 1316, 1397, 1523, 1540, 1558
CviQI	GTAC	6 cut(s)	1102, 1211, 1625, 2010, 2133, 2171
DpnI	GATC	6 cut(s)	1015, 1040, 1758, 1902, 1953, 2185
DpnII	GATC	6 cut(s)	1013, 1038, 1756, 1900, 1951, 2183
DrdI	GACNNNNNNGTC	1 cut(s)	1597
DriI	GACNNNNNGTC	1 cut(s)	1865
DseDI	GACNNNNNNGTC	1 cut(s)	1597
EaeI	YGGCCR	2 cut(s)	822, 1924
Eam1104I	CTCTTC	3 cut(s)	842, 1120, 1764
Eam1105I	GACNNNNNGTC	1 cut(s)	1865
EarI	CTCTTC	3 cut(s)	842, 1120, 1764
EciI	GGCGGA	3 cut(s)	540, 621, 1176
Eco130I	CCWWGG	2 cut(s)	1760, 1884
Eco24I	GRGCYC	1 cut(s)	1705
Eco31I	GGTCTC	4 cut(s)	2082, 2112, 2139, 2148
Eco32I	GATATC	1 cut(s)	1432
Eco47I	GGWCC	2 cut(s)	2062, 2098
Eco57I	CTGAAG	3 cut(s)	582, 1209, 1800
Eco81I	CCTNAGG	1 cut(s)	661
EcoO109I	RGGNCCY	1 cut(s)	927
EcoRI	GAATTC	2 cut(s)	904, 971
EcoRII	CCWGG	6 cut(s)	739, 1113, 1233, 1921, 2135, 2157
EcoRV	GATATC	1 cut(s)	1432
EcoT14I	CCWWGG	2 cut(s)	1760, 1884
EcoT22I	ATGCAT	1 cut(s)	451
EcoT38I	GRGCYC	1 cut(s)	1705
ErhI	CCWWGG	2 cut(s)	1760, 1884
Esp3I	CGTCTC	1 cut(s)	234
FaeI	CATG	8 cut(s)	880, 979, 1020, 1319, 1400, 1526, 1543, 1561
FaqI	GGGAC	2 cut(s)	2075, 2111
FatI	CATG	8 cut(s)	876, 975, 1016, 1315, 1396, 1522, 1539, 1557
FauI	CCCGC	1 cut(s)	2088
FauNDI	CATATG	1 cut(s)	1027
FblI	GTMKAC	1 cut(s)	1275
Fnu4HI	GCNGC	9 cut(s)	129, 138, 309, 351, 441, 593, 1365, 1374, 1812
FokI	GGATG	6 cut(s)	346, 448, 883, 1395, 1673, 1901
FriOI	GRGCYC	1 cut(s)	1705
Fsp4HI	GCNGC	9 cut(s)	129, 138, 309, 351, 441, 593, 1365, 1374, 1812
FspBI	CTAG	2 cut(s)	1350, 1502
GluI	GCNGC	9 cut(s)	129, 138, 309, 351, 441, 593, 1365, 1374, 1812
GsaI	CCCAGC	1 cut(s)	296
GsuI	CTGGAG	9 cut(s)	108, 132, 288, 783, 921, 1017, 1548, 1755, 2158
HaeIII	GGCC	4 cut(s)	824, 928, 1849, 1926
HapII	CCGG	3 cut(s)	170, 224, 347
HgaI	GACGC	3 cut(s)	216, 1730, 1817
Hin1I	GRCGYC	1 cut(s)	227
Hin1II	CATG	8 cut(s)	880, 979, 1020, 1319, 1400, 1526, 1543, 1561
HincII	GTYRAC	3 cut(s)	705, 757, 1590
HindII	GTYRAC	3 cut(s)	705, 757, 1590
HinfI	GANTC	8 cut(s)	392, 865, 911, 992, 1069, 1353, 1536, 1880
HpaI	GTTAAC	1 cut(s)	757
HpaII	CCGG	3 cut(s)	170, 224, 347
Hpy166II	GTNNAC	9 cut(s)	582, 705, 757, 834, 1023, 1102, 1213, 1276, 1590
Hpy188I	TCNGA	9 cut(s)	64, 910, 991, 1184, 1255, 1603, 1900, 2034, 2130
Hpy188III	TCNNGA	9 cut(s)	387, 679, 996, 1011, 1322, 1454, 1565, 2000, 2187
Hpy8I	GTNNAC	9 cut(s)	582, 705, 757, 834, 1023, 1102, 1213, 1276, 1590
Hpy99I	CGWCG	1 cut(s)	616
HpyAV	CCTTC	7 cut(s)	30, 48, 468, 606, 891, 1076, 1310
HpyCH4III	ACNGT	5 cut(s)	99, 517, 1247, 2009, 2167
HpyCH4IV	ACGT	1 cut(s)	1174
HpySE526I	ACGT	1 cut(s)	1174
Hsp92I	GRCGYC	1 cut(s)	227
Hsp92II	CATG	8 cut(s)	880, 979, 1020, 1319, 1400, 1526, 1543, 1561
KspAI	GTTAAC	1 cut(s)	757
Kzo9I	GATC	6 cut(s)	1013, 1038, 1756, 1900, 1951, 2183
LmnI	GCTCC	8 cut(s)	145, 634, 655, 661, 767, 998, 1567, 1633
Lsp1109I	GCAGC	6 cut(s)	115, 124, 320, 452, 1351, 1385
LweI	GCATC	8 cut(s)	206, 305, 320, 368, 436, 458, 703, 1267
MaeI	CTAG	2 cut(s)	1350, 1502
MaeII	ACGT	1 cut(s)	1174
MaeIII	GTNAC	6 cut(s)	517, 721, 1241, 1525, 1907, 2015
MalI	GATC	6 cut(s)	1015, 1040, 1758, 1902, 1953, 2185
MboI	GATC	6 cut(s)	1013, 1038, 1756, 1900, 1951, 2183
MfeI	CAATTG	1 cut(s)	777
MflI	RGATCY	3 cut(s)	1756, 1900, 2183
MhlI	GDGCHC	3 cut(s)	807, 1705, 2115
MlsI	TGGCCA	1 cut(s)	1926
MluNI	TGGCCA	1 cut(s)	1926
MlyI	GAGTC	5 cut(s)	386, 1001, 1362, 1545, 1874
MmeI	TCCRAC	2 cut(s)	296, 350
Mox20I	TGGCCA	1 cut(s)	1926
Mph1103I	ATGCAT	1 cut(s)	451
MroXI	GAANNNNTTC	2 cut(s)	958, 1794
MscI	TGGCCA	1 cut(s)	1926
MseI	TTAA	4 cut(s)	756, 1140, 1941, 2022
MslI	CAYNNNNRTG	1 cut(s)	1314
Msp20I	TGGCCA	1 cut(s)	1926
MspA1I	CMGCKG	5 cut(s)	128, 137, 443, 560, 2095
MspI	CCGG	3 cut(s)	170, 224, 347
MspR9I	CCNGG	7 cut(s)	224, 741, 1115, 1235, 1923, 2137, 2159
MunI	CAATTG	1 cut(s)	777
MvaI	CCWGG	6 cut(s)	741, 1115, 1235, 1923, 2137, 2159
NciI	CCSGG	1 cut(s)	224
NdeI	CATATG	1 cut(s)	1027
NdeII	GATC	6 cut(s)	1013, 1038, 1756, 1900, 1951, 2183
NheI	GCTAGC	1 cut(s)	1501
NlaIII	CATG	8 cut(s)	880, 979, 1020, 1319, 1400, 1526, 1543, 1561
NlaIV	GGNNCC	5 cut(s)	354, 929, 1563, 2063, 2099
NsiI	ATGCAT	1 cut(s)	451
NspI	RCATGY	1 cut(s)	1526
NspV	TTCGAA	2 cut(s)	1061, 1798
PciI	ACATGT	1 cut(s)	1522
PcsI	WCGNNNNNNNCGW	1 cut(s)	1180
PdmI	GAANNNNTTC	2 cut(s)	958, 1794
PfeI	GAWTC	3 cut(s)	865, 911, 1069
PflMI	CCANNNNNTGG	1 cut(s)	1984
PfoI	TCCNGGA	1 cut(s)	1113
PinAI	ACCGGT	1 cut(s)	169
PkrI	GCNGC	9 cut(s)	130, 139, 310, 352, 442, 594, 1366, 1375, 1813
PleI	GAGTC	5 cut(s)	386, 1000, 1361, 1544, 1874
PpsI	GAGTC	5 cut(s)	386, 1000, 1361, 1544, 1874
PscI	ACATGT	1 cut(s)	1522
Psp6I	CCWGG	6 cut(s)	739, 1113, 1233, 1921, 2135, 2157
PspFI	CCCAGC	1 cut(s)	292
PspGI	CCWGG	6 cut(s)	739, 1113, 1233, 1921, 2135, 2157
PspN4I	GGNNCC	5 cut(s)	354, 929, 1563, 2063, 2099
PspPI	GGNCC	3 cut(s)	927, 2062, 2098
PstI	CTGCAG	1 cut(s)	442
PstNI	CAGNNNCTG	2 cut(s)	653, 995
PsuI	RGATCY	3 cut(s)	1756, 1900, 2183
PvuII	CAGCTG	4 cut(s)	128, 137, 443, 560
RsaI	GTAC	6 cut(s)	1103, 1212, 1626, 2011, 2134, 2172
RsaNI	GTAC	6 cut(s)	1102, 1211, 1625, 2010, 2133, 2171
RseI	CAYNNNNRTG	1 cut(s)	1314
SaqAI	TTAA	4 cut(s)	756, 1140, 1941, 2022
SatI	GCNGC	9 cut(s)	129, 138, 309, 351, 441, 593, 1365, 1374, 1812
Sau3AI	GATC	6 cut(s)	1013, 1038, 1756, 1900, 1951, 2183
Sau96I	GGNCC	3 cut(s)	927, 2062, 2098
SchI	GAGTC	5 cut(s)	386, 1001, 1362, 1545, 1874
ScrFI	CCNGG	7 cut(s)	224, 741, 1115, 1235, 1923, 2137, 2159
SduI	GDGCHC	3 cut(s)	807, 1705, 2115
SfaNI	GCATC	8 cut(s)	206, 305, 320, 368, 436, 458, 703, 1267
SfcI	CTRYAG	3 cut(s)	192, 438, 2166
SfuI	TTCGAA	2 cut(s)	1061, 1798
SinI	GGWCC	2 cut(s)	2062, 2098
SmiMI	CAYNNNNRTG	1 cut(s)	1314
SspMI	CTAG	2 cut(s)	1350, 1502
StyD4I	CCNGG	7 cut(s)	222, 739, 1113, 1233, 1921, 2135, 2157
StyI	CCWWGG	2 cut(s)	1760, 1884
TaaI	ACNGT	5 cut(s)	99, 517, 1247, 2009, 2167
TaiI	ACGT	1 cut(s)	1177
TaqI	TCGA	6 cut(s)	863, 1061, 1207, 1705, 1798, 2071
TatI	WGTACW	3 cut(s)	1101, 1210, 1624
TauI	GCSGC	3 cut(s)	353, 595, 1814
TfiI	GAWTC	3 cut(s)	865, 911, 1069
Tru1I	TTAA	4 cut(s)	756, 1140, 1941, 2022
Tru9I	TTAA	4 cut(s)	756, 1140, 1941, 2022
TscAI	CASTG	4 cut(s)	156, 520, 766, 1723
TseI	GCWGC	6 cut(s)	128, 137, 308, 440, 1364, 1373
TspGWI	ACGGA	3 cut(s)	904, 1926, 2130
TspRI	CASTG	4 cut(s)	156, 520, 766, 1723
Van91I	CCANNNNNTGG	1 cut(s)	1984
VpaK11BI	GGWCC	2 cut(s)	2062, 2098
XapI	RAATTY	4 cut(s)	28, 82, 904, 971
XceI	RCATGY	1 cut(s)	1526
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1049, 1537
XmiI	GTMKAC	1 cut(s)	1275
XmnI	GAANNNNTTC	2 cut(s)	958, 1794
XspI	CTAG	2 cut(s)	1350, 1502
Zsp2I	ATGCAT	1 cut(s)	451

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.