Rh2AG570100

proline-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
80043871 .. 80049893
6023 bp
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UTR
Exon/CDS
Intron
Rh2AG570100.1

Sequence Viewer

Length: 1719 bp
ATGTCTTCAACAACATCACCTTCTCCAAATTCTTCACCTTCTGCAAACCCACCAACCAGCTCTGATACCCCACCATCATCAAATTCCACAACTCCACAGTCCTCTTCTCCAGCTGCCTCAGCTGCTCCCCCTCCAGCGTCATCACCGCCCCCACCGGTATCATCACCACCGCCTGCTGTAGCATCTCCACCACCAGCTTCACCACCCCCGGCGTCTCCACCTCCTAAGGCTTCCCCTGCCCCTCCTCCAACGCCTCCTGCTTCACCTCCAGCAGCATCACCGCCACCTCCAACACCAACTTCCCCTCCTCCGGCGGCACCAGCATCCAATGTATCCCCACCGCCACCATCAGGAGACTCCCCTCCTCCCAAAGCCTCCCCAACACCTCCATCAGAAGCCTCACCGCCACCTAAATCCCCTCCTCCTCCAGCTGATGCATCACCGCCTTCATCCACTTCTCCACCGCCACCAAAAGCACCAGAAAAGTCTCCTCCCTCCCCCACTGTTACACCACCTCCATCTGGTTCTCAGTCTGCTCCGCCACCAGCTGATAACACCCCTCCCAAGTCCACATCACCACCGCCTTCAGTTCCCTCATCATCGTCGTCCCCTCCTGCTGTTTCTCCTCCTGCTCCGCCCAGTAATTCATCAGCTCCTGCTCCCTCAGGCTTGCCTGCTATTCCGACACAGAAACCAACTGCAAAGTCAACCAATGATGCCAATGTAACGGCAAATGCCACACCTGGAAACACAAAAGGGTTTAACACTGGAGGAGCTGTGGCAATTGGAATTGTGGTTGGGGTGCTGGTGCTCAGTCTTGTTGTGATGGCCGTGTGGTTCACCAAGAAGAAGAAGAGAAAAAGTGGGTCGAATCTTTACGCCATGCCTTCTCCCTTTGCTTCATCCCAGAATTCAGATTCCGTATTTTTGAGGCCCCATTCTCCAGCTCCCCTCGTAGGAAATGGTTCTGGTAAAGAATTCATGTACGCACAATCAGAGTCTGGAGCAAGCAATTCAAGATCATGGTTCACATATGAAGAACTGATCCAAGCCACAAATGGATTTTCGACACAGAATCTATTGGGTGAAGGTGGATTTGGTTGTGTGTACAAAGGTATCCTAGAAGATGGAAGAGAAGTTGCTGTTAAACAGCTAAAAATTGGTGGTGGACAAGGGGAACGTGAGTTCAGAGCTGAAGTTGAAATTATCAGTCGAGTACACCATCGCCATTTGGTTTCCCTGGTGGGTTACTGTATATCTGAGCATCAAAGGTTGCTTGTCTACGACTTTGTTCCAAACGATACCCTTCATTACCATCTTCATGGTCAGGATATGCCGATTATGGATTGGGCAACTAGAGTCAAAGTTGCTGCTGGTGCAGCTCGTGGGATAGCTTACTTACATGAAGATTGCCATCCTCGCATTATTCATAGAGATATCAAGTCATCAAACATCCTTCTGGATAGCAATTTTGAAGCTCAGGTTGCAGATTTTGGGCTTGCAAAGCTAGCATTGGATACAAATACACATGTAACCACACGAGTCATGGGAACATTTGGATACATGGCTCCAGAATATGCAACAAGTGGAAAGTTGACAGATAAGTCTGATGTTTATTCTTATGGCGTTGTACTATTGGAGCTGATTACTGGTCGCAAGCCTGTGGATGGCTCTCAGCCATTAGGTGATGAGAGCCTTGTTGAATGGGTAAATTCATAA

Protein Analysis

572

Amino Acids

58.67

Weight (kDa)

6.87

Isoelectric Point (pI)

79.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 356 - 558 1.9e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 357 - 558 5.3e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1603
AccB1I GGYRCC 1 cut(s) 316
AccI GTMKAC 1 cut(s) 1281
AclWI GGATC 1 cut(s) 1039
AcoI YGGCCR 1 cut(s) 828
AcsI RAATTY 5 cut(s) 28, 82, 910, 977, 1711
AcuI CTGAAG 2 cut(s) 570, 1215
AcyI GRCGYC 1 cut(s) 212
AfaI GTAC 4 cut(s) 986, 1109, 1218, 1632
AfiI CCNNNNNNNGG 5 cut(s) 310, 350, 521, 956, 1667
AflIII ACRYGT 1 cut(s) 1528
AgeI ACCGGT 1 cut(s) 154
AgsI TTSAA 5 cut(s) 9, 1017, 1202, 1475, 1703
AjnI CCWGG 2 cut(s) 742, 1239
AjuI GAANNNNNNNTTGG 4 cut(s) 283, 315, 1080, 1112
AloI GAACNNNNNNTCC 2 cut(s) 1169, 1201
Alw21I GWGCWC 1 cut(s) 813
Alw26I GTCTC 3 cut(s) 219, 348, 492
AlwI GGATC 1 cut(s) 1039
AlwNI CAGNNNCTG 2 cut(s) 656, 1001
AoxI GGCC 2 cut(s) 828, 932
ApeKI GCWGC 5 cut(s) 113, 122, 272, 1370, 1379
ApoI RAATTY 5 cut(s) 28, 82, 910, 977, 1711
AsiGI ACCGGT 1 cut(s) 154
Asp700I GAANNNNTTC 1 cut(s) 964
AspS9I GGNCC 1 cut(s) 933
AsuC2I CCSGG 1 cut(s) 209
AsuNHI GCTAGC 1 cut(s) 1507
AxyI CCTNAGG 2 cut(s) 225, 664
BaeI ACNNNNGTAYC 2 cut(s) 1099, 1132
BanI GGYRCC 1 cut(s) 316
BauI CACGAG 2 cut(s) 1383, 1539
Bbv12I GWGCWC 1 cut(s) 813
BbvCI CCTCAGC 1 cut(s) 118
BbvI GCAGC 5 cut(s) 100, 109, 284, 1357, 1391
BceAI ACGGC 2 cut(s) 744, 815
BciT130I CCWGG 2 cut(s) 744, 1241
BciVI GTATCC 4 cut(s) 343, 1127, 1510, 1553
BcnI CCSGG 1 cut(s) 209
BcoDI GTCTC 3 cut(s) 219, 348, 492
BfaI CTAG 3 cut(s) 1121, 1356, 1508
BfmI CTRYAG 1 cut(s) 177
BfuI GTATCC 4 cut(s) 343, 1127, 1510, 1553
BisI GCNGC 6 cut(s) 114, 123, 273, 315, 1371, 1380
BlsI GCNGC 6 cut(s) 115, 124, 274, 316, 1372, 1381
Bme1390I CCNGG 3 cut(s) 209, 744, 1241
BmgT120I GGNCC 1 cut(s) 933
BmiI GGNNCC 3 cut(s) 318, 935, 1569
BmrFI CCNGG 3 cut(s) 209, 744, 1241
BmrI ACTGGG 1 cut(s) 633
BmsI GCATC 7 cut(s) 191, 284, 332, 424, 446, 706, 1273
BmtI GCTAGC 1 cut(s) 1511
BmuI ACTGGG 1 cut(s) 633
BpmI CTGGAG 8 cut(s) 93, 117, 252, 411, 789, 927, 1023, 1554
Bpu10I CCTNAGC 2 cut(s) 118, 1479
BpuMI CCSGG 1 cut(s) 209
BsaBI GATNNNNATC 1 cut(s) 1413
BsaHI GRCGYC 1 cut(s) 212
BsaJI CCNNGG 2 cut(s) 207, 1239
BsaWI WCCGGW 1 cut(s) 154
BsaXI ACNNNNNCTCC 6 cut(s) 289, 319, 499, 529, 762, 792
Bsc4I CCNNNNNNNGG 5 cut(s) 310, 350, 521, 956, 1667
Bse118I RCCGGY 1 cut(s) 154
Bse1I ACTGG 3 cut(s) 639, 772, 1654
Bse21I CCTNAGG 2 cut(s) 225, 664
Bse8I GATNNNNATC 1 cut(s) 1413
BseBI CCWGG 2 cut(s) 744, 1241
BseDI CCNNGG 2 cut(s) 207, 1239
BseGI GGATG 6 cut(s) 323, 449, 902, 1414, 1452, 1672
BseJI GATNNNNATC 1 cut(s) 1413
BseLI CCNNNNNNNGG 5 cut(s) 310, 350, 521, 956, 1667
BseMII CTCAG 7 cut(s) 132, 542, 678, 826, 1251, 1493, 1688
BseNI ACTGG 3 cut(s) 639, 772, 1654
BseRI GAGGAG 8 cut(s) 234, 297, 354, 411, 414, 480, 615, 786
BseXI GCAGC 5 cut(s) 100, 109, 284, 1357, 1391
BsgI GTGCAG 1 cut(s) 1398
BshFI GGCC 2 cut(s) 830, 934
BshNI GGYRCC 1 cut(s) 316
BshTI ACCGGT 1 cut(s) 154
BsiHKAI GWGCWC 1 cut(s) 813
BsiSI CCGG 3 cut(s) 155, 209, 311
BslFI GGGAC 1 cut(s) 592
BslI CCNNNNNNNGG 5 cut(s) 310, 350, 521, 956, 1667
BsmAI GTCTC 3 cut(s) 219, 348, 492
BsmBI CGTCTC 1 cut(s) 219
BsmFI GGGAC 1 cut(s) 592
BsnI GGCC 2 cut(s) 830, 934
Bsp1286I GDGCHC 1 cut(s) 813
Bsp1407I TGTACA 1 cut(s) 1107
Bsp143I GATC 2 cut(s) 1019, 1044
BspANI GGCC 2 cut(s) 830, 934
BspCNI CTCAG 7 cut(s) 131, 541, 677, 825, 1252, 1492, 1687
BspLI GGNNCC 3 cut(s) 318, 935, 1569
BspOI GCTAGC 1 cut(s) 1511
BspPI GGATC 1 cut(s) 1039
BspT107I GGYRCC 1 cut(s) 316
BsrFI RCCGGY 1 cut(s) 154
BsrGI TGTACA 1 cut(s) 1107
BsrI ACTGG 3 cut(s) 639, 772, 1654
BssAI RCCGGY 1 cut(s) 154
BssECI CCNNGG 2 cut(s) 207, 1239
BssMI GATC 2 cut(s) 1019, 1044
BssNI GRCGYC 1 cut(s) 212
BssSI CACGAG 2 cut(s) 1383, 1539
Bst2BI CACGAG 2 cut(s) 1383, 1539
Bst2UI CCWGG 2 cut(s) 744, 1241
Bst4CI ACNGT 3 cut(s) 99, 505, 1253
Bst6I CTCTTC 3 cut(s) 109, 848, 1126
BstACI GRCGYC 1 cut(s) 212
BstAUI TGTACA 1 cut(s) 1107
BstC8I GCNNGC 7 cut(s) 174, 671, 675, 1009, 1500, 1509, 1658
BstDEI CTNAG 8 cut(s) 118, 225, 528, 664, 812, 1260, 1479, 1674
BstF5I GGATG 6 cut(s) 323, 449, 902, 1414, 1452, 1672
BstKTI GATC 2 cut(s) 1022, 1047
BstMAI GTCTC 3 cut(s) 219, 348, 492
BstMBI GATC 2 cut(s) 1019, 1044
BstNI CCWGG 2 cut(s) 744, 1241
BstNSI RCATGY 1 cut(s) 1532
BstSCI CCNGG 3 cut(s) 207, 742, 1239
BstSFI CTRYAG 1 cut(s) 177
BstV1I GCAGC 5 cut(s) 100, 109, 284, 1357, 1391
BstXI CCANNNNNNTGG 1 cut(s) 1322
Bsu36I CCTNAGG 2 cut(s) 225, 664
BsuI GTATCC 4 cut(s) 343, 1127, 1510, 1553
BsuRI GGCC 2 cut(s) 830, 934
BtgZI GCGATG 1 cut(s) 1208
BtsCI GGATG 6 cut(s) 323, 449, 902, 1414, 1452, 1672
BtsIMutI CAGTG 2 cut(s) 501, 765
Cac8I GCNNGC 7 cut(s) 174, 671, 675, 1009, 1500, 1509, 1658
CaiI CAGNNNCTG 2 cut(s) 656, 1001
Cfr10I RCCGGY 1 cut(s) 154
Cfr13I GGNCC 1 cut(s) 933
CseI GACGC 2 cut(s) 126, 201
Csp6I GTAC 4 cut(s) 985, 1108, 1217, 1631
CspAI ACCGGT 1 cut(s) 154
CviAII CATG 8 cut(s) 883, 982, 1023, 1322, 1403, 1529, 1546, 1564
CviQI GTAC 4 cut(s) 985, 1108, 1217, 1631
DdeI CTNAG 8 cut(s) 118, 225, 528, 664, 812, 1260, 1479, 1674
DpnI GATC 2 cut(s) 1021, 1046
DpnII GATC 2 cut(s) 1019, 1044
DrdI GACNNNNNNGTC 1 cut(s) 1603
DseDI GACNNNNNNGTC 1 cut(s) 1603
EaeI YGGCCR 1 cut(s) 828
Eam1104I CTCTTC 3 cut(s) 109, 848, 1126
EarI CTCTTC 3 cut(s) 109, 848, 1126
EciI GGCGGA 2 cut(s) 528, 624
Eco32I GATATC 1 cut(s) 1438
Eco57I CTGAAG 2 cut(s) 570, 1215
Eco81I CCTNAGG 2 cut(s) 225, 664
EcoO109I RGGNCCY 1 cut(s) 933
EcoRI GAATTC 2 cut(s) 910, 977
EcoRII CCWGG 2 cut(s) 742, 1239
EcoRV GATATC 1 cut(s) 1438
EcoT22I ATGCAT 1 cut(s) 439
Esp3I CGTCTC 1 cut(s) 219
FaeI CATG 8 cut(s) 886, 985, 1026, 1325, 1406, 1532, 1549, 1567
FaqI GGGAC 1 cut(s) 592
FatI CATG 8 cut(s) 882, 981, 1022, 1321, 1402, 1528, 1545, 1563
FauNDI CATATG 1 cut(s) 1033
FblI GTMKAC 1 cut(s) 1281
Fnu4HI GCNGC 6 cut(s) 114, 123, 273, 315, 1371, 1380
FokI GGATG 6 cut(s) 310, 436, 889, 1401, 1439, 1679
Fsp4HI GCNGC 6 cut(s) 114, 123, 273, 315, 1371, 1380
FspBI CTAG 3 cut(s) 1121, 1356, 1508
GluI GCNGC 6 cut(s) 114, 123, 273, 315, 1371, 1380
GsuI CTGGAG 8 cut(s) 93, 117, 252, 411, 789, 927, 1023, 1554
HaeIII GGCC 2 cut(s) 830, 934
HapII CCGG 3 cut(s) 155, 209, 311
HgaI GACGC 2 cut(s) 126, 201
Hin1I GRCGYC 1 cut(s) 212
Hin1II CATG 8 cut(s) 886, 985, 1026, 1325, 1406, 1532, 1549, 1567
HincII GTYRAC 2 cut(s) 708, 1596
HindII GTYRAC 2 cut(s) 708, 1596
HinfI GANTC 7 cut(s) 356, 871, 917, 998, 1075, 1359, 1542
HpaII CCGG 3 cut(s) 155, 209, 311
Hpy166II GTNNAC 9 cut(s) 570, 708, 840, 1029, 1108, 1169, 1219, 1282, 1596
Hpy188I TCNGA 8 cut(s) 64, 394, 684, 916, 997, 1190, 1261, 1609
Hpy188III TCNNGA 6 cut(s) 351, 1002, 1017, 1328, 1460, 1571
Hpy8I GTNNAC 9 cut(s) 570, 708, 840, 1029, 1108, 1169, 1219, 1282, 1596
Hpy99I CGWCG 1 cut(s) 607
HpyAV CCTTC 8 cut(s) 30, 48, 456, 594, 897, 1082, 1316, 1466
HpyCH4III ACNGT 3 cut(s) 99, 505, 1253
HpyCH4IV ACGT 1 cut(s) 1180
HpyCH4V TGCA 7 cut(s) 44, 437, 701, 1379, 1487, 1502, 1580
HpyF3I CTNAG 8 cut(s) 118, 225, 528, 664, 812, 1260, 1479, 1674
HpySE526I ACGT 1 cut(s) 1180
Hsp92I GRCGYC 1 cut(s) 212
Hsp92II CATG 8 cut(s) 886, 985, 1026, 1325, 1406, 1532, 1549, 1567
Kzo9I GATC 2 cut(s) 1019, 1044
Lsp1109I GCAGC 5 cut(s) 100, 109, 284, 1357, 1391
LweI GCATC 7 cut(s) 191, 284, 332, 424, 446, 706, 1273
MaeI CTAG 3 cut(s) 1121, 1356, 1508
MaeII ACGT 1 cut(s) 1180
MaeIII GTNAC 4 cut(s) 505, 724, 1247, 1531
MalI GATC 2 cut(s) 1021, 1046
MboI GATC 2 cut(s) 1019, 1044
MfeI CAATTG 1 cut(s) 783
MhlI GDGCHC 1 cut(s) 813
MlyI GAGTC 4 cut(s) 350, 1007, 1368, 1551
MmeI TCCRAC 3 cut(s) 272, 314, 707
Mph1103I ATGCAT 1 cut(s) 439
MroXI GAANNNNTTC 1 cut(s) 964
MseI TTAA 2 cut(s) 762, 1146
MslI CAYNNNNRTG 1 cut(s) 1320
MspA1I CMGCKG 4 cut(s) 113, 122, 431, 548
MspI CCGG 3 cut(s) 155, 209, 311
MspR9I CCNGG 3 cut(s) 209, 744, 1241
MunI CAATTG 1 cut(s) 783
MvaI CCWGG 2 cut(s) 744, 1241
NciI CCSGG 1 cut(s) 209
NdeI CATATG 1 cut(s) 1033
NdeII GATC 2 cut(s) 1019, 1044
NheI GCTAGC 1 cut(s) 1507
NlaIII CATG 8 cut(s) 886, 985, 1026, 1325, 1406, 1532, 1549, 1567
NlaIV GGNNCC 3 cut(s) 318, 935, 1569
NsiI ATGCAT 1 cut(s) 439
NspI RCATGY 1 cut(s) 1532
PciI ACATGT 1 cut(s) 1528
PdmI GAANNNNTTC 1 cut(s) 964
PfeI GAWTC 3 cut(s) 871, 917, 1075
PinAI ACCGGT 1 cut(s) 154
PkrI GCNGC 6 cut(s) 115, 124, 274, 316, 1372, 1381
PleI GAGTC 4 cut(s) 350, 1006, 1367, 1550
PpsI GAGTC 4 cut(s) 350, 1006, 1367, 1550
PscI ACATGT 1 cut(s) 1528
Psp6I CCWGG 2 cut(s) 742, 1239
PspGI CCWGG 2 cut(s) 742, 1239
PspN4I GGNNCC 3 cut(s) 318, 935, 1569
PspPI GGNCC 1 cut(s) 933
PstNI CAGNNNCTG 2 cut(s) 656, 1001
PvuII CAGCTG 4 cut(s) 113, 122, 431, 548
RsaI GTAC 4 cut(s) 986, 1109, 1218, 1632
RsaNI GTAC 4 cut(s) 985, 1108, 1217, 1631
RseI CAYNNNNRTG 1 cut(s) 1320
SaqAI TTAA 2 cut(s) 762, 1146
SatI GCNGC 6 cut(s) 114, 123, 273, 315, 1371, 1380
Sau3AI GATC 2 cut(s) 1019, 1044
Sau96I GGNCC 1 cut(s) 933
SchI GAGTC 4 cut(s) 350, 1007, 1368, 1551
ScrFI CCNGG 3 cut(s) 209, 744, 1241
SduI GDGCHC 1 cut(s) 813
SfaNI GCATC 7 cut(s) 191, 284, 332, 424, 446, 706, 1273
SfcI CTRYAG 1 cut(s) 177
SmiMI CAYNNNNRTG 1 cut(s) 1320
SspMI CTAG 3 cut(s) 1121, 1356, 1508
StyD4I CCNGG 3 cut(s) 207, 742, 1239
TaaI ACNGT 3 cut(s) 99, 505, 1253
TaiI ACGT 1 cut(s) 1183
TaqI TCGA 3 cut(s) 869, 1067, 1213
TatI WGTACW 3 cut(s) 1107, 1216, 1630
TauI GCSGC 1 cut(s) 317
TfiI GAWTC 3 cut(s) 871, 917, 1075
Tru1I TTAA 2 cut(s) 762, 1146
Tru9I TTAA 2 cut(s) 762, 1146
TscAI CASTG 2 cut(s) 508, 772
TseI GCWGC 5 cut(s) 113, 122, 272, 1370, 1379
TspGWI ACGGA 1 cut(s) 910
TspRI CASTG 2 cut(s) 508, 772
XapI RAATTY 5 cut(s) 28, 82, 910, 977, 1711
XceI RCATGY 1 cut(s) 1532
XcmI CCANNNNNNNNNTGG 2 cut(s) 1055, 1543
XmiI GTMKAC 1 cut(s) 1281
XmnI GAANNNNTTC 1 cut(s) 964
XspI CTAG 3 cut(s) 1121, 1356, 1508
Zsp2I ATGCAT 1 cut(s) 439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.