Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0015091

Physical Location & Seq

Genomic Coordinates Forward (+)

23733646 .. 23736460

Gene Structure 2815 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G245900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

ATGCATTGCTCAAGCCTCTCTCTTCCCGCTCCCTCCAAACTCCCATTGCCACCTTCTCTCAGACCTCAGAAAAGCCCCAATTTTGATTCCCTCAATAACCGTCTGATCAGCCACATCAATGTGGGTCATCTCCGCAAAGCAATCACCACCCTTGATCTCATGGCCCAGCGCGGGACTCATCCAGATCTCCCCATCTACTCCCTCCTCCTCAAGTCCTGCATCAGGTCCCGGAATTTCGACCTGGGAAGACTCGTCCACGCCCGGCTGGTTCACTCACAGCTCGAACTCGACCCGGTCGTCCTGAACTCACTGATTAGCTTGTACTCAAAATCTAGGGACTGGAAAAAGGCAAATTCAATCTTCGAAAATATGGGAAATAAGAGAAATTTGGTTTCTTGGAGTGCCATGGTGTCTTGTTTTGCGAACAATGATATGGGATTGGAAGCTATTCTGACATTTCTTGATATGCTTGAAGATGGGTTTTACCCGAATGAGTATTGCTTTGCATCGGTGATTCGGGCATGTTCGAATGCCCAGAATATTCGGATTGGGAATATAATTTTTGGGTCAGTAATCAAAAGTGGGTATCTTGGGTCAGATGTGTGTGTTGGGTGCTCGTTGATCGATATGTTTGCAAAGGGTAGTGGAGAGTTGGATGACGCATATAAGGTGTTTGAGACAATGCCTGAGACGGATGCTGTTACTTGGACTTTGATGATTACTAGGCTTGCACAAATGGGTTGCCCAGGAGAGGCTATTGATTTGTATGTGGATATGTTATGGAGTGGGCTCATGCCTGACCAGTTTACACTAAGTGGCGTTATATCAGCTTGTACAAAGTTGGACTCATTGTCGTTAGGGCAGCAATTGCATTCATGGGTTATACGGTCTGGGTTGGCTTTGGGTCATTGTGTTGGGTGTTGTTTGGTGGACATGTATGCCAAGTGTGCGGCTGATGGATCGATGGATGATGCAAGGAAGGTATTTGATCGGATGCCAAACCATAATGTTTTGTCATGGACTTCAATCATCAATGGATATGTGCAGAGTGGAGAGGGTGATGAGGAGGCAATCAAACTCTTTGTTGGAATGATGACGGGTCATGTTCCACCAAACCATTTCACGTTTTCTAGCATTTTGAAGGCTTGTGCAAATCTTTCTGATCTGCGTAAGGGTGATCAGGTTCACTCCCTGGCAGTGAAACTAGGCCTTGCATCAGTTAATTGTGTGGGAAATTCACTTATTAGCATGTACTCAAGGTCTGGCCAGGTGGAAGATGCCCGGAAAGCTTTTGATATTTTGTATGAGAAAAATTTGATATCTTATAACACAATTGTTGATGCATATGCCAAGCATTCAGACACAGAAGAAGCCTTTGGAATTTTTCATGAAATTCAGGATACAGGATTTGGGGCTAGTGCTTTCACATTTTCTAGTCTCTTGAGTGGAGCTGCAAGCATTTGTGCAGTTGGTAAGGGTGAGCAAATCCATGCCCGGATTATAAAATCAGGATTTGAGTCAAACCAAGGCATTTGTAATGCTTTGGTTTCCATGTATTCCAGGTGTGGAAACATAGATGCTGCTTTTGCAGTGTTCAACGAGATGGAAGATTGGAATGTTATATCATGGACGTCAATGATCACAGGTTTTGCAAAGCATGGATATGCGGCTGCAGCAGTGGAAATGTTCAACAAAATGCTTGAGGCTGGATTAAAACCGAACGAGATCACGTATATTGCTGTTTTGTCAGCTTGTAGCCATGCTGGTTTGGTTGCTGAGGGATGGAAACACTTCAAGGCAATGCAGAAGAAACATGGTATCATCCCAAGAATGGAACATTATGCATGCATGGTAGATTTATTAGGCCGCTCAGGATCCCTTGTAGAAGCCATTGAGTTTATTAACTCAATGCCTTTTACTGCTGATGAACTAATCTGGCGAACATTTCTTGGAGCCTGCCGAGTACATGGTCACATAGAGCTCGGGAAACATGCTGCAAAGATGATTATTGAGCAGAACCCACATGATTCTGCAGCATATAGTTTACTGTCGAATTTGTATGCTTCCAGTGGTCTTTGGGAAGAAGTAGCCAAAGTAAGAAAAGATATGAAAGAGAAGTTTTTGATAAAAGAAGCAGGTTCTAGCTGGATAGAGGTGAAAAATAAGATCCACAAGTTTCATGTTGGGGATACGTCACACCCCAAAGCACGGGAGATTTATGATGAACTGGATAAATTGGGTTCAAAGATAAAGAAAATAGGCTTTGTCCCCAATACAGATTTTGTACTTCATGATGTGGAAGAGGAGCAAAAAGAGTATTATTTGTTTCAACACAGTGAGAAAATAGCAGTGGCGTTTGGTCTTATTAGCACATCGAAATCGAAACCCATTAGAGTATTTAAGAATCTCCGTGTTTGTGGAGACTGCCACACTGCGATTAAGTATATTTCAAAAGCCACTGGGAGAGAAATAGTGGTAAGGGATTCAAATCGGTTTCATCATTTCAAGGATGGGACATGCTCTTGCAATGATTACTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

847

Amino Acids

93.7

Weight (kDa)

6.7

Isoelectric Point (pI)

37.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015091)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49170
fragaria_vesca	FvH4_6g45980 FvH4_6g45980
malus_domestica	MD09G1078500.v1.1 MD13G1104000.v1.1
prunus_persica	Prupe.3G245900_v2.0.a1
pyrus_communis	pycom09g00520
rosa_chinensis	RchiOBHm_Chr2g0164221
rosa_laevigata	RLG00000021445
rosa_multiflora	Rmu_sc0001427.1_g000014
rosa_roxburghii	Rroxscaffold_2G00086710
rosa_rugosa	Rorug02G0507100
rosa_samantha	Rh2BG586100 Rh2CG557000 Rh2DG595700
rosa_wichuraiana	Rw2G047630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1326, 1502
AasI	GACNNNNNNGTC	1 cut(s)	296
AatII	GACGTC	1 cut(s)	1634
Acc36I	ACCTGC	1 cut(s)	2126
AccBSI	CCGCTC	2 cut(s)	29, 1869
AccII	CGCG	1 cut(s)	171
AciI	CCGC	6 cut(s)	27, 133, 171, 950, 1667, 1867
AclWI	GGATC	4 cut(s)	967, 1869, 1882, 2161
AcoI	YGGCCR	1 cut(s)	1264
AcsI	RAATTY	8 cut(s)	232, 352, 385, 1234, 1312, 1380, 1392, 2053
AcyI	GRCGYC	1 cut(s)	1631
AdeI	CACNNNGTG	1 cut(s)	815
AfaI	GTAC	5 cut(s)	323, 835, 1253, 1965, 2286
AfiI	CCNNNNNNNGG	5 cut(s)	171, 222, 751, 1831, 2208
AflIII	ACRYGT	1 cut(s)	933
AhdI	GACNNNNNGTC	1 cut(s)	850
AjnI	CCWGG	5 cut(s)	240, 745, 1191, 1266, 1559
AjuI	GAANNNNNNNTTGG	2 cut(s)	1359, 1391
AluBI	AGCT	9 cut(s)	280, 318, 446, 830, 1289, 1451, 1751, 1981, 2145
AluI	AGCT	9 cut(s)	280, 318, 446, 830, 1289, 1451, 1751, 1981, 2145
Alw21I	GWGCWC	2 cut(s)	617, 1983
Alw26I	GTCTC	4 cut(s)	671, 683, 1442, 2415
AlwI	GGATC	4 cut(s)	967, 1869, 1882, 2161
Ama87I	CYCGRG	1 cut(s)	1982
AoxI	GGCC	4 cut(s)	162, 1207, 1264, 1864
ApeKI	GCWGC	7 cut(s)	862, 1451, 1580, 1670, 1673, 1994, 2033
ApoI	RAATTY	8 cut(s)	232, 352, 385, 1234, 1312, 1380, 1392, 2053
Asp700I	GAANNNNTTC	2 cut(s)	447, 1790
AspLEI	GCGC	1 cut(s)	171
AspS9I	GGNCC	2 cut(s)	163, 225
AsuC2I	CCSGG	5 cut(s)	229, 262, 293, 1282, 1495
AsuHPI	GGTGA	6 cut(s)	136, 523, 1070, 1187, 1490, 2167
AsuII	TTCGAA	2 cut(s)	363, 527
AvaI	CYCGRG	1 cut(s)	1982
AvaII	GGWCC	1 cut(s)	225
BalI	TGGCCA	1 cut(s)	1266
BamHI	GGATCC	1 cut(s)	1874
BanII	GRGCYC	2 cut(s)	792, 1983
BbsI	GAAGAC	1 cut(s)	253
Bbv12I	GWGCWC	2 cut(s)	617, 1983
BbvCI	CCTCAGC	1 cut(s)	1776
BbvI	GCAGC	7 cut(s)	874, 1438, 1567, 1657, 1685, 1981, 2045
BccI	CCATC	7 cut(s)	200, 470, 950, 958, 1597, 1776, 2504
BcgI	CGANNNNNNTGC	2 cut(s)	614, 648
BciT130I	CCWGG	5 cut(s)	242, 747, 1193, 1268, 1561
BciVI	GTATCC	2 cut(s)	1393, 2182
BclI	TGATCA	3 cut(s)	105, 1177, 1638
BcnI	CCSGG	5 cut(s)	229, 262, 293, 1282, 1495
BcoDI	GTCTC	4 cut(s)	671, 683, 1442, 2415
BfaI	CTAG	7 cut(s)	333, 723, 1131, 1205, 1416, 1434, 2142
BfmI	CTRYAG	2 cut(s)	1671, 2031
BfuAI	ACCTGC	1 cut(s)	2126
BfuI	GTATCC	2 cut(s)	1393, 2182
BglII	AGATCT	1 cut(s)	184
Bme18I	GGWCC	1 cut(s)	225
BmeRI	GACNNNNNGTC	1 cut(s)	850
BmeT110I	CYCGRG	1 cut(s)	1982
BmgT120I	GGNCC	2 cut(s)	163, 225
BmiI	GGNNCC	3 cut(s)	227, 1876, 1954
BmrI	ACTGGG	1 cut(s)	2469
BmsI	GCATC	9 cut(s)	228, 515, 685, 961, 984, 1223, 1267, 1330, 1567
BmuI	ACTGGG	1 cut(s)	2469
BpiI	GAAGAC	1 cut(s)	253
Bpu10I	CCTNAGC	2 cut(s)	1776, 1870
Bpu14I	TTCGAA	2 cut(s)	363, 527
BpuEI	CTTGAG	4 cut(s)	194, 1240, 1462, 1721
BpuMI	CCSGG	5 cut(s)	229, 262, 293, 1282, 1495
Bsa29I	ATCGAT	2 cut(s)	624, 962
BsaAI	YACGTR	1 cut(s)	1731
BsaBI	GATNNNNATC	1 cut(s)	2487
BsaHI	GRCGYC	1 cut(s)	1631
BsaJI	CCNNGG	5 cut(s)	241, 405, 745, 1191, 1525
Bsc4I	CCNNNNNNNGG	5 cut(s)	171, 222, 751, 1831, 2208
Bse1I	ACTGG	6 cut(s)	344, 802, 2067, 2232, 2464, 2540
Bse3DI	GCAATG	4 cut(s)	4, 44, 1806, 2533
Bse8I	GATNNNNATC	1 cut(s)	2487
BseBI	CCWGG	5 cut(s)	242, 747, 1193, 1268, 1561
BseCI	ATCGAT	2 cut(s)	624, 962
BseDI	CCNNGG	5 cut(s)	241, 405, 745, 1191, 1525
BseGI	GGATG	8 cut(s)	178, 661, 700, 973, 999, 1787, 1821, 2515
BseJI	GATNNNNATC	1 cut(s)	2487
BseLI	CCNNNNNNNGG	5 cut(s)	171, 222, 751, 1831, 2208
BseMI	GCAATG	4 cut(s)	4, 44, 1806, 2533
BseMII	CTCAG	5 cut(s)	73, 80, 678, 1767, 1884
BseNI	ACTGG	6 cut(s)	344, 802, 2067, 2232, 2464, 2540
BseRI	GAGGAG	4 cut(s)	194, 197, 1079, 2318
BseXI	GCAGC	7 cut(s)	874, 1438, 1567, 1657, 1685, 1981, 2045
BseYI	CCCAGC	1 cut(s)	165
BsgI	GTGCAG	2 cut(s)	1064, 1485
Bsh1236I	CGCG	1 cut(s)	171
Bsh1285I	CGRYCG	1 cut(s)	297
BshFI	GGCC	4 cut(s)	164, 1209, 1266, 1866
BshVI	ATCGAT	2 cut(s)	624, 962
BsiEI	CGRYCG	1 cut(s)	297
BsiHKAI	GWGCWC	2 cut(s)	617, 1983
BsiHKCI	CYCGRG	1 cut(s)	1982
BsiSI	CCGG	5 cut(s)	229, 262, 293, 1282, 1495
BslFI	GGGAC	5 cut(s)	187, 211, 350, 2252, 2527
BslI	CCNNNNNNNGG	5 cut(s)	171, 222, 751, 1831, 2208
BsmAI	GTCTC	4 cut(s)	671, 683, 1442, 2415
BsmBI	CGTCTC	1 cut(s)	683
BsmFI	GGGAC	5 cut(s)	187, 211, 350, 2252, 2527
BsmI	GAATGC	3 cut(s)	535, 871, 1354
BsnI	GGCC	4 cut(s)	164, 1209, 1266, 1866
BsoBI	CYCGRG	1 cut(s)	1982
Bsp119I	TTCGAA	2 cut(s)	363, 527
Bsp1286I	GDGCHC	3 cut(s)	617, 792, 1983
Bsp1407I	TGTACA	1 cut(s)	833
Bsp19I	CCATGG	1 cut(s)	405
BspACI	CCGC	6 cut(s)	27, 133, 171, 950, 1667, 1867
BspANI	GGCC	4 cut(s)	164, 1209, 1266, 1866
BspCNI	CTCAG	5 cut(s)	72, 79, 679, 1768, 1883
BspDI	ATCGAT	2 cut(s)	624, 962
BspFNI	CGCG	1 cut(s)	171
BspHI	TCATGA	2 cut(s)	1387, 2290
BspLI	GGNNCC	3 cut(s)	227, 1876, 1954
BspMAI	CTGCAG	2 cut(s)	1675, 2035
BspMI	ACCTGC	1 cut(s)	2126
BspPI	GGATC	4 cut(s)	967, 1869, 1882, 2161
BspT104I	TTCGAA	2 cut(s)	363, 527
BsrBI	CCGCTC	2 cut(s)	29, 1869
BsrDI	GCAATG	4 cut(s)	4, 44, 1806, 2533
BsrGI	TGTACA	1 cut(s)	833
BsrI	ACTGG	6 cut(s)	344, 802, 2067, 2232, 2464, 2540
BssECI	CCNNGG	5 cut(s)	241, 405, 745, 1191, 1525
BssNI	GRCGYC	1 cut(s)	1631
BssT1I	CCWWGG	2 cut(s)	405, 1525
Bst2UI	CCWGG	5 cut(s)	242, 747, 1193, 1268, 1561
Bst4CI	ACNGT	4 cut(s)	101, 888, 2049, 2336
Bst6I	CTCTTC	2 cut(s)	27, 2295
BstACI	GRCGYC	1 cut(s)	1631
BstAPI	GCANNNNNTGC	1 cut(s)	868
BstAUI	TGTACA	1 cut(s)	833
BstBAI	YACGTR	1 cut(s)	1731
BstBI	TTCGAA	2 cut(s)	363, 527
BstC8I	GCNNGC	4 cut(s)	729, 1456, 1846, 1957
BstDEI	CTNAG	6 cut(s)	59, 66, 687, 812, 1776, 1870
BstDSI	CCRYGG	1 cut(s)	405
BstENI	CCTNNNNNAGG	1 cut(s)	220
BstF5I	GGATG	8 cut(s)	178, 661, 700, 973, 999, 1787, 1821, 2515
BstFNI	CGCG	1 cut(s)	171
BstHHI	GCGC	1 cut(s)	171
BstMAI	GTCTC	4 cut(s)	671, 683, 1442, 2415
BstMCI	CGRYCG	1 cut(s)	297
BstMWI	GCNNNNNNNGC	5 cut(s)	868, 947, 1286, 1586, 1673
BstNI	CCWGG	5 cut(s)	242, 747, 1193, 1268, 1561
BstNSI	RCATGY	6 cut(s)	525, 937, 1252, 1848, 1994, 2520
BstSFI	CTRYAG	2 cut(s)	1671, 2031
BstUI	CGCG	1 cut(s)	171
BstV1I	GCAGC	7 cut(s)	874, 1438, 1567, 1657, 1685, 1981, 2045
BstV2I	GAAGAC	1 cut(s)	253
BstX2I	RGATCY	3 cut(s)	184, 1874, 2166
BstYI	RGATCY	3 cut(s)	184, 1874, 2166
Bsu15I	ATCGAT	2 cut(s)	624, 962
BsuI	GTATCC	2 cut(s)	1393, 2182
BsuRI	GGCC	4 cut(s)	164, 1209, 1266, 1866
BsuTUI	ATCGAT	2 cut(s)	624, 962
BtgI	CCRYGG	1 cut(s)	405
BtsCI	GGATG	8 cut(s)	178, 661, 700, 973, 999, 1787, 1821, 2515
BtsI	GCAGTG	5 cut(s)	1203, 1596, 1683, 2355, 2430
BtsIMutI	CAGTG	9 cut(s)	308, 1203, 1596, 1683, 2074, 2341, 2355, 2430, 2457
BveI	ACCTGC	1 cut(s)	2126
Cac8I	GCNNGC	4 cut(s)	729, 1456, 1846, 1957
CciI	TCATGA	2 cut(s)	1387, 2290
CfoI	GCGC	1 cut(s)	171
Cfr13I	GGNCC	2 cut(s)	163, 225
ClaI	ATCGAT	2 cut(s)	624, 962
CseI	GACGC	1 cut(s)	668
Csp6I	GTAC	5 cut(s)	322, 834, 1252, 1964, 2285
CviQI	GTAC	5 cut(s)	322, 834, 1252, 1964, 2285
DdeI	CTNAG	6 cut(s)	59, 66, 687, 812, 1776, 1870
DraIII	CACNNNGTG	1 cut(s)	815
DrdI	GACNNNNNNGTC	1 cut(s)	296
DriI	GACNNNNNGTC	1 cut(s)	850
DseDI	GACNNNNNNGTC	1 cut(s)	296
EaeI	YGGCCR	1 cut(s)	1264
Eam1104I	CTCTTC	2 cut(s)	27, 2295
Eam1105I	GACNNNNNGTC	1 cut(s)	850
EarI	CTCTTC	2 cut(s)	27, 2295
Ecl136II	GAGCTC	1 cut(s)	1981
Eco130I	CCWWGG	2 cut(s)	405, 1525
Eco147I	AGGCCT	1 cut(s)	1209
Eco24I	GRGCYC	2 cut(s)	792, 1983
Eco32I	GATATC	1 cut(s)	1320
Eco47I	GGWCC	1 cut(s)	225
Eco53kI	GAGCTC	1 cut(s)	1981
Eco88I	CYCGRG	1 cut(s)	1982
EcoICRI	GAGCTC	1 cut(s)	1981
EcoNI	CCTNNNNNAGG	1 cut(s)	220
EcoO109I	RGGNCCY	1 cut(s)	225
EcoRII	CCWGG	5 cut(s)	240, 745, 1191, 1266, 1559
EcoRV	GATATC	1 cut(s)	1320
EcoT14I	CCWWGG	2 cut(s)	405, 1525
EcoT22I	ATGCAT	4 cut(s)	6, 1345, 1846, 1850
EcoT38I	GRGCYC	2 cut(s)	792, 1983
ErhI	CCWWGG	2 cut(s)	405, 1525
Esp3I	CGTCTC	1 cut(s)	683
FaqI	GGGAC	5 cut(s)	187, 211, 350, 2252, 2527
FauI	CCCGC	2 cut(s)	34, 164
FauNDI	CATATG	1 cut(s)	1345
FbaI	TGATCA	3 cut(s)	105, 1177, 1638
FokI	GGATG	8 cut(s)	165, 668, 707, 980, 1006, 1794, 1808, 2522
FriOI	GRGCYC	2 cut(s)	792, 1983
FspBI	CTAG	7 cut(s)	333, 723, 1131, 1205, 1416, 1434, 2142
GlaI	GCGC	1 cut(s)	170
GsaI	CCCAGC	1 cut(s)	169
HaeIII	GGCC	4 cut(s)	164, 1209, 1266, 1866
HapII	CCGG	5 cut(s)	229, 262, 293, 1282, 1495
HgaI	GACGC	1 cut(s)	668
HhaI	GCGC	1 cut(s)	171
Hin1I	GRCGYC	1 cut(s)	1631
Hin6I	GCGC	1 cut(s)	169
HinP1I	GCGC	1 cut(s)	169
HindIII	AAGCTT	1 cut(s)	1287
HinfI	GANTC	9 cut(s)	86, 175, 249, 514, 845, 1517, 2027, 2404, 2483
HpaII	CCGG	5 cut(s)	229, 262, 293, 1282, 1495
HphI	GGTGA	6 cut(s)	136, 523, 1070, 1187, 1490, 2167
Hpy166II	GTNNAC	6 cut(s)	256, 271, 807, 931, 1186, 2045
Hpy188I	TCNGA	9 cut(s)	62, 69, 105, 453, 546, 598, 993, 1162, 1360
Hpy8I	GTNNAC	6 cut(s)	256, 271, 807, 931, 1186, 2045
HpyAV	CCTTC	3 cut(s)	63, 973, 1135
HpyCH4III	ACNGT	4 cut(s)	101, 888, 2049, 2336
HpyCH4IV	ACGT	4 cut(s)	1124, 1631, 1730, 2192
HpyF10VI	GCNNNNNNNGC	5 cut(s)	868, 947, 1286, 1586, 1673
HpyF3I	CTNAG	6 cut(s)	59, 66, 687, 812, 1776, 1870
HpySE526I	ACGT	4 cut(s)	1124, 1631, 1730, 2192
Hsp92I	GRCGYC	1 cut(s)	1631
HspAI	GCGC	1 cut(s)	169
Ksp22I	TGATCA	3 cut(s)	105, 1177, 1638
LmnI	GCTCC	4 cut(s)	34, 1448, 1952, 2305
Lsp1109I	GCAGC	7 cut(s)	874, 1438, 1567, 1657, 1685, 1981, 2045
LweI	GCATC	9 cut(s)	228, 515, 685, 961, 984, 1223, 1267, 1330, 1567
MaeI	CTAG	7 cut(s)	333, 723, 1131, 1205, 1416, 1434, 2142
MaeII	ACGT	4 cut(s)	1124, 1631, 1730, 2192
MaeIII	GTNAC	3 cut(s)	700, 1970, 2193
MbiI	CCGCTC	2 cut(s)	29, 1869
MfeI	CAATTG	2 cut(s)	866, 1332
MflI	RGATCY	3 cut(s)	184, 1874, 2166
MhlI	GDGCHC	3 cut(s)	617, 792, 1983
MlsI	TGGCCA	1 cut(s)	1266
MluNI	TGGCCA	1 cut(s)	1266
MlyI	GAGTC	4 cut(s)	169, 243, 839, 1526
MmeI	TCCRAC	3 cut(s)	633, 822, 1066
Mox20I	TGGCCA	1 cut(s)	1266
Mph1103I	ATGCAT	4 cut(s)	6, 1345, 1846, 1850
MroXI	GAANNNNTTC	2 cut(s)	447, 1790
MscI	TGGCCA	1 cut(s)	1266
MseI	TTAA	5 cut(s)	1221, 1712, 1902, 2400, 2439
MslI	CAYNNNNRTG	3 cut(s)	117, 119, 1662
Msp20I	TGGCCA	1 cut(s)	1266
MspI	CCGG	5 cut(s)	229, 262, 293, 1282, 1495
MunI	CAATTG	2 cut(s)	866, 1332
Mva1269I	GAATGC	3 cut(s)	535, 871, 1354
MvaI	CCWGG	5 cut(s)	242, 747, 1193, 1268, 1561
MvnI	CGCG	1 cut(s)	171
MwoI	GCNNNNNNNGC	5 cut(s)	868, 947, 1286, 1586, 1673
NciI	CCSGG	5 cut(s)	229, 262, 293, 1282, 1495
NcoI	CCATGG	1 cut(s)	405
NdeI	CATATG	1 cut(s)	1345
NlaIV	GGNNCC	3 cut(s)	227, 1876, 1954
NmeAIII	GCCGAG	1 cut(s)	1985
NmuCI	GTSAC	2 cut(s)	1970, 2193
NsiI	ATGCAT	4 cut(s)	6, 1345, 1846, 1850
NspI	RCATGY	6 cut(s)	525, 937, 1252, 1848, 1994, 2520
NspV	TTCGAA	2 cut(s)	363, 527
PaeI	GCATGC	1 cut(s)	1848
PagI	TCATGA	2 cut(s)	1387, 2290
PceI	AGGCCT	1 cut(s)	1209
PciI	ACATGT	1 cut(s)	933
PcsI	WCGNNNNNNNCGW	1 cut(s)	294
PctI	GAATGC	3 cut(s)	535, 871, 1354
PdmI	GAANNNNTTC	2 cut(s)	447, 1790
PfeI	GAWTC	5 cut(s)	86, 514, 2027, 2404, 2483
PflFI	GACNNNGTC	1 cut(s)	293
PfoI	TCCNGGA	1 cut(s)	227
PleI	GAGTC	4 cut(s)	169, 243, 839, 1525
PpsI	GAGTC	4 cut(s)	169, 243, 839, 1525
Ppu21I	YACGTR	1 cut(s)	1731
PpuMI	RGGWCCY	1 cut(s)	225
PscI	ACATGT	1 cut(s)	933
PsiI	TTATAA	2 cut(s)	1326, 1502
Psp124BI	GAGCTC	1 cut(s)	1983
Psp5II	RGGWCCY	1 cut(s)	225
Psp6I	CCWGG	5 cut(s)	240, 745, 1191, 1266, 1559
PspFI	CCCAGC	1 cut(s)	165
PspGI	CCWGG	5 cut(s)	240, 745, 1191, 1266, 1559
PspN4I	GGNNCC	3 cut(s)	227, 1876, 1954
PspPI	GGNCC	2 cut(s)	163, 225
PspPPI	RGGWCCY	1 cut(s)	225
PstI	CTGCAG	2 cut(s)	1675, 2035
PsuI	RGATCY	3 cut(s)	184, 1874, 2166
PsyI	GACNNNGTC	1 cut(s)	293
RsaI	GTAC	5 cut(s)	323, 835, 1253, 1965, 2286
RsaNI	GTAC	5 cut(s)	322, 834, 1252, 1964, 2285
RseI	CAYNNNNRTG	3 cut(s)	117, 119, 1662
SacI	GAGCTC	1 cut(s)	1983
SaqAI	TTAA	5 cut(s)	1221, 1712, 1902, 2400, 2439
Sau96I	GGNCC	2 cut(s)	163, 225
SchI	GAGTC	4 cut(s)	169, 243, 839, 1526
SduI	GDGCHC	3 cut(s)	617, 792, 1983
SfaNI	GCATC	9 cut(s)	228, 515, 685, 961, 984, 1223, 1267, 1330, 1567
SfcI	CTRYAG	2 cut(s)	1671, 2031
SfuI	TTCGAA	2 cut(s)	363, 527
SinI	GGWCC	1 cut(s)	225
SmiMI	CAYNNNNRTG	3 cut(s)	117, 119, 1662
SmlI	CTYRAG	5 cut(s)	10, 209, 1255, 1441, 1700
SmoI	CTYRAG	5 cut(s)	10, 209, 1255, 1441, 1700
SphI	GCATGC	1 cut(s)	1848
SseBI	AGGCCT	1 cut(s)	1209
SsiI	CCGC	6 cut(s)	27, 133, 171, 950, 1667, 1867
SspI	AATATT	1 cut(s)	541
SspMI	CTAG	7 cut(s)	333, 723, 1131, 1205, 1416, 1434, 2142
SstI	GAGCTC	1 cut(s)	1983
StuI	AGGCCT	1 cut(s)	1209
StyI	CCWWGG	2 cut(s)	405, 1525
TaaI	ACNGT	4 cut(s)	101, 888, 2049, 2336
TaiI	ACGT	4 cut(s)	1127, 1634, 1733, 2195
TatI	WGTACW	5 cut(s)	321, 833, 1251, 1963, 2284
TauI	GCSGC	3 cut(s)	953, 1670, 1869
TfiI	GAWTC	5 cut(s)	86, 514, 2027, 2404, 2483
Tru1I	TTAA	5 cut(s)	1221, 1712, 1902, 2400, 2439
Tru9I	TTAA	5 cut(s)	1221, 1712, 1902, 2400, 2439
TscAI	CASTG	9 cut(s)	315, 1203, 1596, 1683, 2074, 2341, 2355, 2437, 2464
TseFI	GTSAC	2 cut(s)	1970, 2193
TseI	GCWGC	7 cut(s)	862, 1451, 1580, 1670, 1673, 1994, 2033
Tsp45I	GTSAC	2 cut(s)	1970, 2193
TspDTI	ATGAA	9 cut(s)	864, 1376, 1404, 1941, 2123, 2168, 2238, 2279, 2486
TspGWI	ACGGA	2 cut(s)	707, 2399
TspRI	CASTG	9 cut(s)	315, 1203, 1596, 1683, 2074, 2341, 2355, 2437, 2464
Tth111I	GACNNNGTC	1 cut(s)	293
VpaK11BI	GGWCC	1 cut(s)	225
XagI	CCTNNNNNAGG	1 cut(s)	220
XapI	RAATTY	8 cut(s)	232, 352, 385, 1234, 1312, 1380, 1392, 2053
XceI	RCATGY	6 cut(s)	525, 937, 1252, 1848, 1994, 2520
XmnI	GAANNNNTTC	2 cut(s)	447, 1790
XspI	CTAG	7 cut(s)	333, 723, 1131, 1205, 1416, 1434, 2142
ZraI	GACGTC	1 cut(s)	1632
Zsp2I	ATGCAT	4 cut(s)	6, 1345, 1846, 1850

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.