Prupe.3G279900_v2.0.a1
ERF Family

heavy metal transport detoxification superfamily protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
25590111 .. 25591277
1167 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G279900.1

Sequence Viewer

Length: 501 bp
ATGGCTACGGTTACAGTCTCAGCATTCTCACCTCTGGCCTCGCTCCGTACACGCAATCATTCCCATTCCCTTGCAATTCCCATTCCTTCTCCAAACCTTTCGTTCCGAAACGTTTCCACCTCTTTCCAGCGTTTAACGCACAAGGACCAGAGGTCCCAGGAAACCCTAATTCCAGTTGAAGAAGAAGACAGCGAGCAACAGGAACAGCCCGTTTCGGTCCCCGTTTCGCCCTCCGACACTCTAACCATGCTCTTTCAGGCAGATGGAACAATGAGTGACGCCGCTATCCCTTCAGTAACCAACGCCTTAGAGGAAACTCAAGGTATTACCAACTTAAAAGTTGAAGTTGTTGAGGGTATTGCAACTGTTGAGTTGACAAAACAAACAACAGTACAAGCTACTGGGGTGGCTTCCAGTTTGGTTGAGACCATACAGAGTTCAGGATTTAAGCTACAAACATTGAATTTGAGCTTTGACGAAGAAGAGGAAATTGCTGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

167

Amino Acids

17.93

Weight (kDa)

4.43

Isoelectric Point (pI)

59.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013272)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 282
AclI AACGTT 1 cut(s) 111
AcsI RAATTY 1 cut(s) 463
AcuI CTGAAG 1 cut(s) 276
AcyI GRCGYC 1 cut(s) 279
AfaI GTAC 2 cut(s) 49, 393
AgsI TTSAA 3 cut(s) 179, 344, 463
AhdI GACNNNNNGTC 1 cut(s) 151
AjnI CCWGG 1 cut(s) 156
AluBI AGCT 3 cut(s) 398, 451, 471
AluI AGCT 3 cut(s) 398, 451, 471
Alw26I GTCTC 2 cut(s) 22, 419
AoxI GGCC 1 cut(s) 36
ApoI RAATTY 1 cut(s) 463
Asp700I GAANNNNTTC 1 cut(s) 112
AspS9I GGNCC 3 cut(s) 145, 153, 217
AsuHPI GGTGA 1 cut(s) 21
AvaII GGWCC 3 cut(s) 145, 153, 217
BbsI GAAGAC 1 cut(s) 192
BccI CCATC 1 cut(s) 257
BciT130I CCWGG 1 cut(s) 158
BcoDI GTCTC 2 cut(s) 22, 419
BisI GCNGC 1 cut(s) 282
BlsI GCNGC 1 cut(s) 283
Bme1390I CCNGG 1 cut(s) 158
Bme18I GGWCC 3 cut(s) 145, 153, 217
BmeRI GACNNNNNGTC 1 cut(s) 151
BmgT120I GGNCC 3 cut(s) 145, 153, 217
BmiI GGNNCC 2 cut(s) 155, 219
BmrFI CCNGG 1 cut(s) 158
BmrI ACTGGG 1 cut(s) 411
BmuI ACTGGG 1 cut(s) 411
BpiI GAAGAC 1 cut(s) 192
BpuEI CTTGAG 1 cut(s) 303
BsaHI GRCGYC 1 cut(s) 279
BsaI GGTCTC 1 cut(s) 419
BsaJI CCNNGG 1 cut(s) 156
Bse1I ACTGG 3 cut(s) 173, 406, 414
BseBI CCWGG 1 cut(s) 158
BseDI CCNNGG 1 cut(s) 156
BseMII CTCAG 1 cut(s) 33
BseNI ACTGG 3 cut(s) 173, 406, 414
BshFI GGCC 1 cut(s) 38
BslFI GGGAC 2 cut(s) 139, 203
BsmAI GTCTC 2 cut(s) 22, 419
BsmFI GGGAC 2 cut(s) 139, 203
BsmI GAATGC 1 cut(s) 23
BsnI GGCC 1 cut(s) 38
Bso31I GGTCTC 1 cut(s) 419
BspACI CCGC 1 cut(s) 282
BspANI GGCC 1 cut(s) 38
BspCNI CTCAG 1 cut(s) 32
BspLI GGNNCC 2 cut(s) 155, 219
BspTNI GGTCTC 1 cut(s) 419
BsrI ACTGG 3 cut(s) 173, 406, 414
BssECI CCNNGG 1 cut(s) 156
BssNI GRCGYC 1 cut(s) 279
Bst2UI CCWGG 1 cut(s) 158
Bst4CI ACNGT 4 cut(s) 10, 16, 367, 391
Bst6I CTCTTC 1 cut(s) 477
BstACI GRCGYC 1 cut(s) 279
BstC8I GCNNGC 1 cut(s) 194
BstDEI CTNAG 2 cut(s) 19, 307
BstMAI GTCTC 2 cut(s) 22, 419
BstMWI GCNNNNNNNGC 1 cut(s) 136
BstNI CCWGG 1 cut(s) 158
BstSCI CCNGG 1 cut(s) 156
BstV2I GAAGAC 1 cut(s) 192
BsuRI GGCC 1 cut(s) 38
Cac8I GCNNGC 1 cut(s) 194
Cfr13I GGNCC 3 cut(s) 145, 153, 217
CseI GACGC 1 cut(s) 287
Csp6I GTAC 2 cut(s) 48, 392
CviAII CATG 1 cut(s) 247
CviJI RGCY 7 cut(s) 5, 38, 208, 398, 410, 451, 471
CviKI_1 RGCY 7 cut(s) 5, 38, 208, 398, 410, 451, 471
CviQI GTAC 2 cut(s) 48, 392
DdeI CTNAG 2 cut(s) 19, 307
DriI GACNNNNNGTC 1 cut(s) 151
Eam1104I CTCTTC 1 cut(s) 477
Eam1105I GACNNNNNGTC 1 cut(s) 151
EarI CTCTTC 1 cut(s) 477
Eco31I GGTCTC 1 cut(s) 419
Eco47I GGWCC 3 cut(s) 145, 153, 217
Eco57I CTGAAG 1 cut(s) 276
EcoO109I RGGNCCY 1 cut(s) 153
EcoRII CCWGG 1 cut(s) 156
FaeI CATG 1 cut(s) 250
FaiI YATR 3 cut(s) 248, 431, 499
FaqI GGGAC 2 cut(s) 139, 203
FatI CATG 1 cut(s) 246
Fnu4HI GCNGC 1 cut(s) 282
Fsp4HI GCNGC 1 cut(s) 282
GluI GCNGC 1 cut(s) 282
HaeIII GGCC 1 cut(s) 38
HgaI GACGC 1 cut(s) 287
Hin1I GRCGYC 1 cut(s) 279
Hin1II CATG 1 cut(s) 250
HincII GTYRAC 1 cut(s) 375
HindII GTYRAC 1 cut(s) 375
HphI GGTGA 1 cut(s) 21
Hpy166II GTNNAC 2 cut(s) 50, 375
Hpy188I TCNGA 2 cut(s) 107, 235
Hpy188III TCNNGA 1 cut(s) 441
Hpy8I GTNNAC 2 cut(s) 50, 375
HpyAV CCTTC 2 cut(s) 96, 300
HpyCH4III ACNGT 4 cut(s) 10, 16, 367, 391
HpyCH4IV ACGT 1 cut(s) 111
HpyCH4V TGCA 2 cut(s) 74, 362
HpyF10VI GCNNNNNNNGC 1 cut(s) 136
HpyF3I CTNAG 2 cut(s) 19, 307
HpySE526I ACGT 1 cut(s) 111
Hsp92I GRCGYC 1 cut(s) 279
Hsp92II CATG 1 cut(s) 250
LmnI GCTCC 1 cut(s) 48
MaeII ACGT 1 cut(s) 111
MaeIII GTNAC 3 cut(s) 10, 275, 295
MboII GAAGA 5 cut(s) 191, 194, 197, 491, 494
MluCI AATT 4 cut(s) 75, 168, 463, 489
MmeI TCCRAC 1 cut(s) 258
MnlI CCTC 8 cut(s) 42, 49, 130, 144, 241, 304, 346, 478
MroXI GAANNNNTTC 1 cut(s) 112
MseI TTAA 3 cut(s) 134, 335, 447
MspR9I CCNGG 1 cut(s) 158
Mva1269I GAATGC 1 cut(s) 23
MvaI CCWGG 1 cut(s) 158
MwoI GCNNNNNNNGC 1 cut(s) 136
NlaIII CATG 1 cut(s) 250
NlaIV GGNNCC 2 cut(s) 155, 219
NmuCI GTSAC 1 cut(s) 275
PctI GAATGC 1 cut(s) 23
PdmI GAANNNNTTC 1 cut(s) 112
PkrI GCNGC 1 cut(s) 283
PpuMI RGGWCCY 1 cut(s) 153
Psp1406I AACGTT 1 cut(s) 111
Psp5II RGGWCCY 1 cut(s) 153
Psp6I CCWGG 1 cut(s) 156
PspGI CCWGG 1 cut(s) 156
PspN4I GGNNCC 2 cut(s) 155, 219
PspPI GGNCC 3 cut(s) 145, 153, 217
PspPPI RGGWCCY 1 cut(s) 153
RsaI GTAC 2 cut(s) 49, 393
RsaNI GTAC 2 cut(s) 48, 392
SaqAI TTAA 3 cut(s) 134, 335, 447
SatI GCNGC 1 cut(s) 282
Sau96I GGNCC 3 cut(s) 145, 153, 217
ScrFI CCNGG 1 cut(s) 158
SetI ASST 9 cut(s) 34, 99, 114, 122, 155, 325, 400, 453, 473
SinI GGWCC 3 cut(s) 145, 153, 217
SmlI CTYRAG 1 cut(s) 318
SmoI CTYRAG 1 cut(s) 318
Sse9I AATT 4 cut(s) 75, 168, 463, 489
SsiI CCGC 1 cut(s) 282
StyD4I CCNGG 1 cut(s) 156
TaaI ACNGT 4 cut(s) 10, 16, 367, 391
TaiI ACGT 1 cut(s) 114
TaqII GACCGA 1 cut(s) 205
TasI AATT 4 cut(s) 75, 168, 463, 489
TatI WGTACW 1 cut(s) 391
TauI GCSGC 1 cut(s) 284
Tru1I TTAA 3 cut(s) 134, 335, 447
Tru9I TTAA 3 cut(s) 134, 335, 447
TseFI GTSAC 1 cut(s) 275
Tsp45I GTSAC 1 cut(s) 275
TspGWI ACGGA 1 cut(s) 35
VpaK11BI GGWCC 3 cut(s) 145, 153, 217
XapI RAATTY 1 cut(s) 463
XmnI GAANNNNTTC 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.