Rh2AG621600
ERF Family

heavy metal transport detoxification superfamily protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
84515667 .. 84516529
863 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG621600.1

Sequence Viewer

Length: 255 bp
ATGTTTTTTCAGGCTGATGGTACATTGAGTGATGCTGCTGTGCCTGCAGTGACCAAAGCCTTAGAGGCAACTGAAGGGATTACCAACTTGAAGGTTGAAGTTCATGAGGGTATTGGAGTTGTTGAGTTGAAAAAGCAGACAACAGTACAAGCTACTGGGGTGGCTTCCAGTTTGGTCGAGGCCATACAGAGTTCGGGGTTTAAGCTACAAACGTTGAATTTGAGTTTCGAGGAAGAAGAGGAAATTGCTGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

84

Amino Acids

8.87

Weight (kDa)

4.34

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013272)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 212
AcsI RAATTY 1 cut(s) 217
AcuI CTGAAG 1 cut(s) 93
AfaI GTAC 2 cut(s) 22, 147
AgsI TTSAA 4 cut(s) 91, 98, 130, 217
AluBI AGCT 2 cut(s) 152, 205
AluI AGCT 2 cut(s) 152, 205
AoxI GGCC 1 cut(s) 180
ApeKI GCWGC 1 cut(s) 35
ApoI RAATTY 1 cut(s) 217
BbvI GCAGC 1 cut(s) 22
BccI CCATC 1 cut(s) 11
BfmI CTRYAG 1 cut(s) 45
BglI GCCNNNNNGGC 1 cut(s) 65
BisI GCNGC 1 cut(s) 36
BlsI GCNGC 1 cut(s) 37
BmrI ACTGGG 1 cut(s) 165
BmsI GCATC 1 cut(s) 22
BmuI ACTGGG 1 cut(s) 165
Bse1I ACTGG 2 cut(s) 160, 168
BseNI ACTGG 2 cut(s) 160, 168
BseXI GCAGC 1 cut(s) 22
BshFI GGCC 1 cut(s) 182
BsnI GGCC 1 cut(s) 182
BspANI GGCC 1 cut(s) 182
BspHI TCATGA 1 cut(s) 103
BspMAI CTGCAG 1 cut(s) 49
BsrI ACTGG 2 cut(s) 160, 168
Bst4CI ACNGT 1 cut(s) 145
Bst6I CTCTTC 1 cut(s) 231
BstC8I GCNNGC 1 cut(s) 45
BstDEI CTNAG 1 cut(s) 61
BstMWI GCNNNNNNNGC 2 cut(s) 44, 65
BstSFI CTRYAG 1 cut(s) 45
BstV1I GCAGC 1 cut(s) 22
BsuRI GGCC 1 cut(s) 182
BtsI GCAGTG 1 cut(s) 54
BtsIMutI CAGTG 1 cut(s) 54
Cac8I GCNNGC 1 cut(s) 45
CciI TCATGA 1 cut(s) 103
Csp6I GTAC 2 cut(s) 21, 146
CviAII CATG 1 cut(s) 104
CviJI RGCY 6 cut(s) 14, 59, 152, 164, 182, 205
CviKI_1 RGCY 6 cut(s) 14, 59, 152, 164, 182, 205
CviQI GTAC 2 cut(s) 21, 146
DdeI CTNAG 1 cut(s) 61
Eam1104I CTCTTC 1 cut(s) 231
EarI CTCTTC 1 cut(s) 231
Eco57I CTGAAG 1 cut(s) 93
FaeI CATG 1 cut(s) 107
FaiI YATR 3 cut(s) 105, 185, 253
FatI CATG 1 cut(s) 103
Fnu4HI GCNGC 1 cut(s) 36
Fsp4HI GCNGC 1 cut(s) 36
GluI GCNGC 1 cut(s) 36
HaeIII GGCC 1 cut(s) 182
Hin1II CATG 1 cut(s) 107
Hpy188III TCNNGA 1 cut(s) 104
HpyAV CCTTC 2 cut(s) 68, 85
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4IV ACGT 1 cut(s) 212
HpyCH4V TGCA 1 cut(s) 47
HpyF10VI GCNNNNNNNGC 2 cut(s) 44, 65
HpyF3I CTNAG 1 cut(s) 61
HpySE526I ACGT 1 cut(s) 212
Hsp92II CATG 1 cut(s) 107
LpnPI CCDG 3 cut(s) 57, 141, 181
Lsp1109I GCAGC 1 cut(s) 22
LweI GCATC 1 cut(s) 22
MaeII ACGT 1 cut(s) 212
MaeIII GTNAC 1 cut(s) 49
MboII GAAGA 2 cut(s) 245, 248
MluCI AATT 2 cut(s) 217, 243
MnlI CCTC 5 cut(s) 58, 100, 172, 223, 232
MseI TTAA 1 cut(s) 201
MwoI GCNNNNNNNGC 2 cut(s) 44, 65
NlaIII CATG 1 cut(s) 107
NmuCI GTSAC 1 cut(s) 49
PagI TCATGA 1 cut(s) 103
PkrI GCNGC 1 cut(s) 37
Psp1406I AACGTT 1 cut(s) 212
PstI CTGCAG 1 cut(s) 49
RsaI GTAC 2 cut(s) 22, 147
RsaNI GTAC 2 cut(s) 21, 146
SaqAI TTAA 1 cut(s) 201
SatI GCNGC 1 cut(s) 36
SetI ASST 4 cut(s) 96, 154, 207, 215
SfaNI GCATC 1 cut(s) 22
SfcI CTRYAG 1 cut(s) 45
Sse9I AATT 2 cut(s) 217, 243
TaaI ACNGT 1 cut(s) 145
TaiI ACGT 1 cut(s) 215
TaqI TCGA 2 cut(s) 177, 228
TasI AATT 2 cut(s) 217, 243
TatI WGTACW 1 cut(s) 145
Tru1I TTAA 1 cut(s) 201
Tru9I TTAA 1 cut(s) 201
TscAI CASTG 1 cut(s) 54
TseFI GTSAC 1 cut(s) 49
TseI GCWGC 1 cut(s) 35
Tsp45I GTSAC 1 cut(s) 49
TspDTI ATGAA 1 cut(s) 92
TspRI CASTG 1 cut(s) 54
XapI RAATTY 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.