Prupe.3G305500_v2.0.a1

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0012914
Physical Location & Seq
Forward (+)
26757149 .. 26761607
4459 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G305500.1

Sequence Viewer

Length: 2016 bp
ATGGCGGGAAAGGAGGAAGCGAAGCGTGGAGGAGGGTGGAGCGAAGAGGTGTGCTGGAGAAAGCAAGTCCACGATAACCTAAGCAGGCTCCATTCTCTTCTCTTCGGAGCCGAACTCGCCGTCGAGAGGCACGACTTCTCCTCAGCTCAGGTCCTCGGGCTTCGTCTCCTCGGCTTCCTCGACTCACAGTCGCATTCTCAACTCGACCATGCCTTCGTCCGCCCCATTCGCCGCGAAACCGTCTCCGAGCTCGACGCCTCTCGCCGAGCTCTCATTCCTCATTCTGATCGCAAAGCCTTTGAGCAAGCAAAGAAAGCTCCGGGGTGTGTTTTTGGCACCAATGGAGATATTGACATTGAGAAGATTAAGCAGTCAAAGTACTTTCAGGCTCTTCTTCATCAGTCTAATAATGGAAGGGTTGTAAATGATTTGGGAGATCAACTGGAGAGGCAGGACAAGTTGACTTGCAAGTTATCAAAACCTCTGGCACAAACAAAGTTGGCATCGTTGTACAAAAACAACTTCATGACGGAAAGTAATGGCAAATCCAAGAGTTCTTGGGGCTCTAGAAGTAACAGCTCTGGTGACTGCACTATTGTAGAAAAGCTTCACTCTTATCACAACCGTAATGACGGTCACAGTGCGTTATCTTTTCAAAAAGTTGAAGAGGAAGAAAAAGCTTATGGGAACTCCTTAAGGGCTAAACGTGCACACAAGGAGTTTACTAGCCCCATTATTGATAATGCAAAGTCCCCATCAAGCAGTGAAGATGTTAAAGCTGATGTTTCTAGCCATAGCTTTGTTACTGCCAAAGCAAAATTGGAAATGGATGCAAGACAAAGAAGAGGGTTAGCAGGTTCACCAAATGCTTGTGTCTCCCCTCAAAGTGATAACAATGCTACTAATAGGGGATATAGTACGAGATCATATGGCTATTCACGCCGTGGTGCCCGTGGTAATTTTGTTCCACCTATTAAATCTAATGAGGGCAATGTTGGGAATATGACTTCACGAGTAGCTGGGAAGTCAGATGATACATTAGGTGACTCAACTAAGAAATGTTTGGAAATGCTCTGTGGTCCTGATGGAGAGCTTCCAGAAAAATTGAGGAACTTGGAACCTCGTCTTCTTGAACATGTTAGTAATGAGATCATGGACAAGGATCCAAATGTTCGATGGAATGATATTGCTGGTTTGGAGCATGCTAAAAAATGTGTGACCGAGATGGTCATATGGCCGCTATTACGTCCTGACATTTTTAAAGGTTGTCGTTCTCCTGGAAAAGGTCTTCTTCTCTTTGGTCCACCAGGAACAGGAAAAACAATGATTGGGAAAGCCATAGCTGGAGAGGCAAAGGCAACCTTTTTCTACATATCTGCCAGTTCATTAACAAGCAAATGGATTGGTGAGGGTGAAAAGCTAGTGCGGGCCCTTTTTGGAGTTGCGAGTTGTCGTCAGCCAGCTGTAATTTTTGTTGATGAAATTGATTCACTTCTCTCACAGCGTAAGTCAGAAGGTGAGCATGAATCAAGTAGACGACTTAAAACACAGTTCCTCATTGAAATGGAAGGCTTTGACAGTGGCAGTGAGCAAATTCTTCTTATAGGAGCAACGAATCGACCCCAAGAACTGGATGAAGCAGCACGGAGGCGACTTACCAAGAGGCTTTATATTCCCCTGCCTTCATCAGAAGCAAGAGCCTGGATCGTGCAGAATATCTTAGACAAGGATGGACTATTCAAACTTTCAAGGGAGGATATTGATGGCATATGCAATTTAACTGAAGGGTACTCAGGATCAGACATGAAAAACTTAGTGAAGGATGCCTCTATGGGACCACTAAGAGAGGCTCTGAAACAAGGCATAGAAATAACAAAGCTGAAAAAGGAGGATATGCGGGCAGTCACTGTTGAGGACTTCGAGAGTGCATTGCAAGAGGTAAGGCCCTCTGTCTCGTTGAACGAGCTTGGTACGTATGAGGAATGGAACAAGCAATTTGGAAGCTTGTCATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000018 GO:0000228 GO:0000280 GO:0000287 GO:0001503 GO:0001649 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006163 GO:0006282 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007140 GO:0007276 GO:0008150 GO:0008152 GO:0008283 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009314 GO:0009628 GO:0009892 GO:0009987 GO:0010212 GO:0010520 GO:0010564 GO:0010569 GO:0010605 GO:0010639 GO:0010941 GO:0010948 GO:0016043 GO:0016787 GO:0017144 GO:0019219 GO:0019222 GO:0019637 GO:0019693 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0030154 GO:0031323 GO:0031324 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0033043 GO:0033687 GO:0034641 GO:0040020 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045128 GO:0045786 GO:0045835 GO:0045910 GO:0045934 GO:0046034 GO:0046483 GO:0046872 GO:0048232 GO:0048285 GO:0048471 GO:0048519 GO:0048523 GO:0048583 GO:0048609 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051321 GO:0051445 GO:0051447 GO:0051704 GO:0051716 GO:0051726 GO:0051783 GO:0051784 GO:0055086 GO:0060255 GO:0060548 GO:0060631 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071479 GO:0071704 GO:0071840 GO:0072521 GO:0080090 GO:0080134 GO:0080135 GO:0104004 GO:0110029 GO:0140013 GO:1901135 GO:1901360 GO:1901564 GO:1903046 GO:2000241 GO:2000242 GO:2000779 GO:2001020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA Vps4_C

Protein Analysis

672

Amino Acids

74.45

Weight (kDa)

8.65

Isoelectric Point (pI)

48.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012914)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G27120
fragaria_vesca FvH4_6g53320
malus_domestica MD09G1011500.v1.1 MD17G1012000.v1.1
prunus_persica Prupe.3G305500_v2.0.a1
pyrus_communis pycom111g00980 pycom17g00970
rosa_chinensis RchiOBHm_Chr2g0175481
rosa_laevigata RLG00000022331
rosa_multiflora Rmu_sc0003302.1_g000002 Rmu_sc0021955.1_g000001
rosa_roxburghii Rroxscaffold_2G00077280
rosa_rugosa Rorug02G0585100
rosa_samantha Rh2AG664600 Rh2BG675300 Rh2CG638500 Rh2DG689300
rosa_wichuraiana Rw2G054470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 845
AccB1I GGYRCC 2 cut(s) 335, 947
AccB7I CCANNNNNTGG 1 cut(s) 1630
AccI GTMKAC 1 cut(s) 1534
AccII CGCG 1 cut(s) 234
AciI CCGC 6 cut(s) 5, 220, 232, 1238, 1426, 1897
AclWI GGATC 4 cut(s) 1157, 1170, 1712, 1804
AcoI YGGCCR 1 cut(s) 1235
AcsI RAATTY 1 cut(s) 1593
AcuI CTGAAG 1 cut(s) 1803
AcyI GRCGYC 1 cut(s) 255
AdeI CACNNNGTG 1 cut(s) 944
AfaI GTAC 5 cut(s) 380, 512, 919, 1790, 1972
AfiI CCNNNNNNNGG 4 cut(s) 126, 1283, 1313, 1630
AflII CTTAAG 1 cut(s) 694
AflIII ACRYGT 1 cut(s) 1135
AgsI TTSAA 7 cut(s) 656, 665, 1133, 1562, 1741, 1749, 1960
AhdI GACNNNNNGTC 1 cut(s) 187
AjnI CCWGG 3 cut(s) 1276, 1306, 1700
Alw21I GWGCWC 3 cut(s) 252, 271, 712
Alw26I GTCTC 4 cut(s) 170, 247, 880, 1957
Alw44I GTGCAC 1 cut(s) 708
AlwI GGATC 4 cut(s) 1157, 1170, 1712, 1804
AlwNI CAGNNNCTG 1 cut(s) 1907
Ama87I CYCGRG 1 cut(s) 155
AoxI GGCC 3 cut(s) 1235, 1428, 1943
ApaI GGGCCC 1 cut(s) 1432
ApaLI GTGCAC 1 cut(s) 708
ApeKI GCWGC 1 cut(s) 1640
ApoI RAATTY 1 cut(s) 1593
ArsI GACNNNNNNTTYG 4 cut(s) 105, 137, 197, 229
Asp700I GAANNNNTTC 1 cut(s) 606
AspS9I GGNCC 7 cut(s) 151, 1079, 1301, 1428, 1429, 1835, 1944
AsuC2I CCSGG 1 cut(s) 321
AsuHPI GGTGA 6 cut(s) 596, 852, 1055, 1418, 1424, 1529
AvaI CYCGRG 1 cut(s) 155
AvaII GGWCC 4 cut(s) 151, 1079, 1301, 1835
BaeGI GKGCMC 3 cut(s) 712, 952, 1432
BamHI GGATCC 1 cut(s) 1162
BanI GGYRCC 2 cut(s) 335, 947
BanII GRGCYC 4 cut(s) 252, 271, 566, 1432
BarI GAAGNNNNNNTAC 2 cut(s) 591, 623
BauI CACGAG 1 cut(s) 1011
BbsI GAAGAC 2 cut(s) 1118, 1280
Bbv12I GWGCWC 3 cut(s) 252, 271, 712
BbvCI CCTCAGC 1 cut(s) 142
BbvI GCAGC 1 cut(s) 1652
BccI CCATC 6 cut(s) 763, 1079, 1170, 1219, 1724, 1757
BceAI ACGGC 2 cut(s) 104, 927
BciT130I CCWGG 3 cut(s) 1278, 1308, 1702
BcnI CCSGG 1 cut(s) 321
BcoDI GTCTC 4 cut(s) 170, 247, 880, 1957
BfaI CTAG 4 cut(s) 567, 726, 789, 1421
BfrI CTTAAG 1 cut(s) 694
BfuAI ACCTGC 1 cut(s) 845
BisI GCNGC 3 cut(s) 232, 1238, 1641
BlsI GCNGC 3 cut(s) 233, 1239, 1642
BmcAI AGTACT 1 cut(s) 380
Bme1390I CCNGG 4 cut(s) 321, 1278, 1308, 1702
Bme18I GGWCC 4 cut(s) 151, 1079, 1301, 1835
BmeRI GACNNNNNGTC 1 cut(s) 187
BmeT110I CYCGRG 1 cut(s) 155
BmgT120I GGNCC 7 cut(s) 151, 1079, 1301, 1428, 1429, 1835, 1944
BmiI GGNNCC 8 cut(s) 89, 109, 337, 949, 1119, 1164, 1430, 1836
BmrFI CCNGG 4 cut(s) 321, 1278, 1308, 1702
BmsI GCATC 3 cut(s) 512, 820, 1813
BpiI GAAGAC 2 cut(s) 1118, 1280
BplI GAGNNNNNCTC 2 cut(s) 99, 131
BpmI CTGGAG 3 cut(s) 76, 464, 1365
Bpu10I CCTNAGC 3 cut(s) 80, 142, 147
BpuMI CCSGG 1 cut(s) 321
BsaAI YACGTR 1 cut(s) 1974
BsaHI GRCGYC 1 cut(s) 255
BsaJI CCNNGG 5 cut(s) 154, 169, 320, 943, 952
BsaXI ACNNNNNCTCC 2 cut(s) 122, 152
Bsc4I CCNNNNNNNGG 4 cut(s) 126, 1283, 1313, 1630
Bse1I ACTGG 3 cut(s) 447, 1380, 1635
Bse3DI GCAATG 2 cut(s) 997, 1928
BseBI CCWGG 3 cut(s) 1278, 1308, 1702
BseDI CCNNGG 5 cut(s) 154, 169, 320, 943, 952
BseGI GGATG 4 cut(s) 835, 1639, 1735, 1828
BseLI CCNNNNNNNGG 4 cut(s) 126, 1283, 1313, 1630
BseMI GCAATG 2 cut(s) 997, 1928
BseMII CTCAG 3 cut(s) 156, 161, 1806
BseNI ACTGG 3 cut(s) 447, 1380, 1635
BseRI GAGGAG 3 cut(s) 45, 130, 158
BseSI GKGCMC 3 cut(s) 712, 952, 1432
BseXI GCAGC 1 cut(s) 1652
BseYI CCCAGC 1 cut(s) 1019
BsgI GTGCAG 2 cut(s) 574, 1730
Bsh1236I CGCG 1 cut(s) 234
BshFI GGCC 3 cut(s) 1237, 1430, 1945
BshNI GGYRCC 2 cut(s) 335, 947
BsiHKAI GWGCWC 3 cut(s) 252, 271, 712
BsiHKCI CYCGRG 1 cut(s) 155
BsiSI CCGG 1 cut(s) 320
BslFI GGGAC 2 cut(s) 736, 1848
BslI CCNNNNNNNGG 4 cut(s) 126, 1283, 1313, 1630
BsmAI GTCTC 4 cut(s) 170, 247, 880, 1957
BsmBI CGTCTC 2 cut(s) 170, 247
BsmFI GGGAC 2 cut(s) 736, 1848
BsmI GAATGC 1 cut(s) 193
BsnI GGCC 3 cut(s) 1237, 1430, 1945
BsoBI CYCGRG 1 cut(s) 155
Bsp120I GGGCCC 1 cut(s) 1428
Bsp1286I GDGCHC 6 cut(s) 252, 271, 566, 712, 952, 1432
Bsp1407I TGTACA 1 cut(s) 510
Bsp143I GATC 7 cut(s) 286, 436, 923, 1149, 1162, 1704, 1796
BspACI CCGC 6 cut(s) 5, 220, 232, 1238, 1426, 1897
BspANI GGCC 3 cut(s) 1237, 1430, 1945
BspCNI CTCAG 3 cut(s) 155, 160, 1805
BspFNI CGCG 1 cut(s) 234
BspHI TCATGA 1 cut(s) 525
BspLI GGNNCC 8 cut(s) 89, 109, 337, 949, 1119, 1164, 1430, 1836
BspMI ACCTGC 1 cut(s) 845
BspPI GGATC 4 cut(s) 1157, 1170, 1712, 1804
BspQI GCTCTTC 1 cut(s) 396
BspT107I GGYRCC 2 cut(s) 335, 947
BspTI CTTAAG 1 cut(s) 694
BsrDI GCAATG 2 cut(s) 997, 1928
BsrGI TGTACA 1 cut(s) 510
BsrI ACTGG 3 cut(s) 447, 1380, 1635
BssECI CCNNGG 5 cut(s) 154, 169, 320, 943, 952
BssMI GATC 7 cut(s) 286, 436, 923, 1149, 1162, 1704, 1796
BssNI GRCGYC 1 cut(s) 255
BssSI CACGAG 1 cut(s) 1011
Bst2BI CACGAG 1 cut(s) 1011
Bst2UI CCWGG 3 cut(s) 1278, 1308, 1702
Bst4CI ACNGT 8 cut(s) 189, 241, 626, 635, 641, 1551, 1580, 1909
Bst6I CTCTTC 6 cut(s) 39, 102, 107, 396, 660, 838
BstACI GRCGYC 1 cut(s) 255
BstAFI CTTAAG 1 cut(s) 694
BstAUI TGTACA 1 cut(s) 510
BstBAI YACGTR 1 cut(s) 1974
BstC8I GCNNGC 6 cut(s) 86, 306, 1203, 1428, 1461, 1899
BstDEI CTNAG 8 cut(s) 80, 142, 147, 1053, 1720, 1792, 1813, 1841
BstDSI CCRYGG 2 cut(s) 943, 952
BstENI CCTNNNNNAGG 1 cut(s) 1281
BstF5I GGATG 4 cut(s) 835, 1639, 1735, 1828
BstFNI CGCG 1 cut(s) 234
BstKTI GATC 7 cut(s) 289, 439, 926, 1152, 1165, 1707, 1799
BstMAI GTCTC 4 cut(s) 170, 247, 880, 1957
BstMBI GATC 7 cut(s) 286, 436, 923, 1149, 1162, 1704, 1796
BstMWI GCNNNNNNNGC 6 cut(s) 116, 228, 314, 707, 939, 1349
BstNI CCWGG 3 cut(s) 1278, 1308, 1702
BstNSI RCATGY 2 cut(s) 1139, 1205
BstSCI CCNGG 4 cut(s) 319, 1276, 1306, 1700
BstSLI GKGCMC 3 cut(s) 712, 952, 1432
BstSNI TACGTA 1 cut(s) 1974
BstUI CGCG 1 cut(s) 234
BstV1I GCAGC 1 cut(s) 1652
BstV2I GAAGAC 2 cut(s) 1118, 1280
BstX2I RGATCY 1 cut(s) 1162
BstYI RGATCY 1 cut(s) 1162
BsuRI GGCC 3 cut(s) 1237, 1430, 1945
BtgI CCRYGG 2 cut(s) 943, 952
BtsCI GGATG 4 cut(s) 835, 1639, 1735, 1828
BtsI GCAGTG 2 cut(s) 769, 1591
BtsIMutI CAGTG 5 cut(s) 646, 769, 1585, 1591, 1905
BveI ACCTGC 1 cut(s) 845
Cac8I GCNNGC 6 cut(s) 86, 306, 1203, 1428, 1461, 1899
CaiI CAGNNNCTG 1 cut(s) 1907
CciI TCATGA 1 cut(s) 525
Cfr13I GGNCC 7 cut(s) 151, 1079, 1301, 1428, 1429, 1835, 1944
CseI GACGC 1 cut(s) 263
Csp6I GTAC 5 cut(s) 379, 511, 918, 1789, 1971
CviAII CATG 7 cut(s) 209, 526, 1136, 1153, 1202, 1523, 1804
CviQI GTAC 5 cut(s) 379, 511, 918, 1789, 1971
DdeI CTNAG 8 cut(s) 80, 142, 147, 1053, 1720, 1792, 1813, 1841
DpnI GATC 7 cut(s) 288, 438, 925, 1151, 1164, 1706, 1798
DpnII GATC 7 cut(s) 286, 436, 923, 1149, 1162, 1704, 1796
DraI TTTAAA 1 cut(s) 1261
DraIII CACNNNGTG 1 cut(s) 944
DriI GACNNNNNGTC 1 cut(s) 187
EaeI YGGCCR 1 cut(s) 1235
Eam1104I CTCTTC 6 cut(s) 39, 102, 107, 396, 660, 838
Eam1105I GACNNNNNGTC 1 cut(s) 187
EarI CTCTTC 6 cut(s) 39, 102, 107, 396, 660, 838
EciI GGCGGA 1 cut(s) 209
Ecl136II GAGCTC 2 cut(s) 250, 269
Eco105I TACGTA 1 cut(s) 1974
Eco24I GRGCYC 4 cut(s) 252, 271, 566, 1432
Eco47I GGWCC 4 cut(s) 151, 1079, 1301, 1835
Eco53kI GAGCTC 2 cut(s) 250, 269
Eco57I CTGAAG 1 cut(s) 1803
Eco88I CYCGRG 1 cut(s) 155
EcoICRI GAGCTC 2 cut(s) 250, 269
EcoNI CCTNNNNNAGG 1 cut(s) 1281
EcoO109I RGGNCCY 3 cut(s) 151, 1429, 1944
EcoRII CCWGG 3 cut(s) 1276, 1306, 1700
EcoT38I GRGCYC 4 cut(s) 252, 271, 566, 1432
Esp3I CGTCTC 2 cut(s) 170, 247
FaeI CATG 7 cut(s) 212, 529, 1139, 1156, 1205, 1526, 1807
FalI AAGNNNNNCTT 4 cut(s) 1275, 1307, 1346, 1378
FaqI GGGAC 2 cut(s) 736, 1848
FatI CATG 7 cut(s) 208, 525, 1135, 1152, 1201, 1522, 1803
FauI CCCGC 2 cut(s) 1419, 1890
FauNDI CATATG 3 cut(s) 928, 1232, 1769
FblI GTMKAC 1 cut(s) 1534
Fnu4HI GCNGC 3 cut(s) 232, 1238, 1641
FokI GGATG 4 cut(s) 842, 1646, 1742, 1835
FriOI GRGCYC 4 cut(s) 252, 271, 566, 1432
Fsp4HI GCNGC 3 cut(s) 232, 1238, 1641
FspBI CTAG 4 cut(s) 567, 726, 789, 1421
GluI GCNGC 3 cut(s) 232, 1238, 1641
GsaI CCCAGC 1 cut(s) 1023
GsuI CTGGAG 3 cut(s) 76, 464, 1365
HaeIII GGCC 3 cut(s) 1237, 1430, 1945
HapII CCGG 1 cut(s) 320
HgaI GACGC 1 cut(s) 263
Hin1I GRCGYC 1 cut(s) 255
Hin1II CATG 7 cut(s) 212, 529, 1139, 1156, 1205, 1526, 1807
HincII GTYRAC 1 cut(s) 462
HindII GTYRAC 1 cut(s) 462
HindIII AAGCTT 3 cut(s) 605, 678, 2002
HinfI GANTC 5 cut(s) 182, 1046, 1487, 1526, 1615
HpaII CCGG 1 cut(s) 320
HphI GGTGA 6 cut(s) 596, 852, 1055, 1418, 1424, 1529
Hpy166II GTNNAC 7 cut(s) 70, 462, 710, 723, 860, 1304, 1535
Hpy188I TCNGA 8 cut(s) 107, 247, 286, 1030, 1513, 1690, 1801, 1854
Hpy8I GTNNAC 7 cut(s) 70, 462, 710, 723, 860, 1304, 1535
Hpy99I CGWCG 2 cut(s) 125, 257
HpyAV CCTTC 7 cut(s) 223, 408, 1508, 1562, 1692, 1778, 1813
HpyCH4III ACNGT 8 cut(s) 189, 241, 626, 635, 641, 1551, 1580, 1909
HpyCH4IV ACGT 3 cut(s) 706, 1246, 1973
HpyCH4V TGCA 9 cut(s) 468, 591, 710, 746, 833, 1711, 1773, 1928, 1933
HpyF10VI GCNNNNNNNGC 6 cut(s) 116, 228, 314, 707, 939, 1349
HpyF3I CTNAG 8 cut(s) 80, 142, 147, 1053, 1720, 1792, 1813, 1841
HpySE526I ACGT 3 cut(s) 706, 1246, 1973
Hsp92I GRCGYC 1 cut(s) 255
Hsp92II CATG 7 cut(s) 212, 529, 1139, 1156, 1205, 1526, 1807
Kzo9I GATC 7 cut(s) 286, 436, 923, 1149, 1162, 1704, 1796
LguI GCTCTTC 1 cut(s) 396
LmnI GCTCC 6 cut(s) 39, 93, 107, 322, 1198, 1607
Lsp1109I GCAGC 1 cut(s) 1652
LweI GCATC 3 cut(s) 512, 820, 1813
MaeI CTAG 4 cut(s) 567, 726, 789, 1421
MaeII ACGT 3 cut(s) 706, 1246, 1973
MaeIII GTNAC 7 cut(s) 572, 584, 635, 802, 1043, 1216, 1903
MalI GATC 7 cut(s) 288, 438, 925, 1151, 1164, 1706, 1798
MboI GATC 7 cut(s) 286, 436, 923, 1149, 1162, 1704, 1796
MflI RGATCY 1 cut(s) 1162
MhlI GDGCHC 6 cut(s) 252, 271, 566, 712, 952, 1432
MluCI AATT 8 cut(s) 818, 958, 1103, 1467, 1482, 1593, 1774, 1994
MlyI GAGTC 2 cut(s) 176, 1040
MroXI GAANNNNTTC 1 cut(s) 606
MseI TTAA 8 cut(s) 366, 695, 774, 975, 1260, 1388, 1542, 1778
MslI CAYNNNNRTG 1 cut(s) 1562
MspA1I CMGCKG 1 cut(s) 1463
MspCI CTTAAG 1 cut(s) 694
MspI CCGG 1 cut(s) 320
MspR9I CCNGG 4 cut(s) 321, 1278, 1308, 1702
Mva1269I GAATGC 1 cut(s) 193
MvaI CCWGG 3 cut(s) 1278, 1308, 1702
MvnI CGCG 1 cut(s) 234
MwoI GCNNNNNNNGC 6 cut(s) 116, 228, 314, 707, 939, 1349
NciI CCSGG 1 cut(s) 321
NdeI CATATG 3 cut(s) 928, 1232, 1769
NdeII GATC 7 cut(s) 286, 436, 923, 1149, 1162, 1704, 1796
NlaIII CATG 7 cut(s) 212, 529, 1139, 1156, 1205, 1526, 1807
NlaIV GGNNCC 8 cut(s) 89, 109, 337, 949, 1119, 1164, 1430, 1836
NmeAIII GCCGAG 2 cut(s) 150, 290
NmuCI GTSAC 5 cut(s) 584, 635, 1043, 1216, 1903
NspI RCATGY 2 cut(s) 1139, 1205
PaeI GCATGC 1 cut(s) 1205
PagI TCATGA 1 cut(s) 525
PciI ACATGT 1 cut(s) 1135
PciSI GCTCTTC 1 cut(s) 396
PcsI WCGNNNNNNNCGW 2 cut(s) 129, 177
PctI GAATGC 1 cut(s) 193
PdmI GAANNNNTTC 1 cut(s) 606
PfeI GAWTC 3 cut(s) 1487, 1526, 1615
PflMI CCANNNNNTGG 1 cut(s) 1630
PfoI TCCNGGA 1 cut(s) 1276
PkrI GCNGC 3 cut(s) 233, 1239, 1642
PleI GAGTC 2 cut(s) 176, 1040
PpsI GAGTC 2 cut(s) 176, 1040
Ppu21I YACGTR 1 cut(s) 1974
PpuMI RGGWCCY 1 cut(s) 151
PscI ACATGT 1 cut(s) 1135
Psp124BI GAGCTC 2 cut(s) 252, 271
Psp5II RGGWCCY 1 cut(s) 151
Psp6I CCWGG 3 cut(s) 1276, 1306, 1700
PspFI CCCAGC 1 cut(s) 1019
PspGI CCWGG 3 cut(s) 1276, 1306, 1700
PspN4I GGNNCC 8 cut(s) 89, 109, 337, 949, 1119, 1164, 1430, 1836
PspOMI GGGCCC 1 cut(s) 1428
PspPI GGNCC 7 cut(s) 151, 1079, 1301, 1428, 1429, 1835, 1944
PspPPI RGGWCCY 1 cut(s) 151
PstNI CAGNNNCTG 1 cut(s) 1907
PsuI RGATCY 1 cut(s) 1162
PvuII CAGCTG 1 cut(s) 1463
RsaI GTAC 5 cut(s) 380, 512, 919, 1790, 1972
RsaNI GTAC 5 cut(s) 379, 511, 918, 1789, 1971
RseI CAYNNNNRTG 1 cut(s) 1562
SacI GAGCTC 2 cut(s) 252, 271
SapI GCTCTTC 1 cut(s) 396
SaqAI TTAA 8 cut(s) 366, 695, 774, 975, 1260, 1388, 1542, 1778
SatI GCNGC 3 cut(s) 232, 1238, 1641
Sau3AI GATC 7 cut(s) 286, 436, 923, 1149, 1162, 1704, 1796
Sau96I GGNCC 7 cut(s) 151, 1079, 1301, 1428, 1429, 1835, 1944
ScaI AGTACT 1 cut(s) 380
SchI GAGTC 2 cut(s) 176, 1040
ScrFI CCNGG 4 cut(s) 321, 1278, 1308, 1702
SduI GDGCHC 6 cut(s) 252, 271, 566, 712, 952, 1432
SfaNI GCATC 3 cut(s) 512, 820, 1813
SinI GGWCC 4 cut(s) 151, 1079, 1301, 1835
SmiMI CAYNNNNRTG 1 cut(s) 1562
SmlI CTYRAG 1 cut(s) 694
SmoI CTYRAG 1 cut(s) 694
SnaBI TACGTA 1 cut(s) 1974
SphI GCATGC 1 cut(s) 1205
Sse9I AATT 8 cut(s) 818, 958, 1103, 1467, 1482, 1593, 1774, 1994
SsiI CCGC 6 cut(s) 5, 220, 232, 1238, 1426, 1897
SspMI CTAG 4 cut(s) 567, 726, 789, 1421
SstI GAGCTC 2 cut(s) 252, 271
StyD4I CCNGG 4 cut(s) 319, 1276, 1306, 1700
TaaI ACNGT 8 cut(s) 189, 241, 626, 635, 641, 1551, 1580, 1909
TaiI ACGT 3 cut(s) 709, 1249, 1976
TaqI TCGA 7 cut(s) 123, 180, 204, 252, 1174, 1618, 1920
TaqII GACCGA 1 cut(s) 1235
TasI AATT 8 cut(s) 818, 958, 1103, 1467, 1482, 1593, 1774, 1994
TatI WGTACW 2 cut(s) 378, 510
TauI GCSGC 2 cut(s) 234, 1240
TfiI GAWTC 3 cut(s) 1487, 1526, 1615
Tru1I TTAA 8 cut(s) 366, 695, 774, 975, 1260, 1388, 1542, 1778
Tru9I TTAA 8 cut(s) 366, 695, 774, 975, 1260, 1388, 1542, 1778
TscAI CASTG 5 cut(s) 646, 769, 1585, 1591, 1912
TseFI GTSAC 5 cut(s) 584, 635, 1043, 1216, 1903
TseI GCWGC 1 cut(s) 1640
Tsp45I GTSAC 5 cut(s) 584, 635, 1043, 1216, 1903
TspDTI ATGAA 8 cut(s) 386, 514, 1374, 1494, 1539, 1650, 1674, 1820
TspGWI ACGGA 2 cut(s) 545, 1660
TspRI CASTG 5 cut(s) 646, 769, 1585, 1591, 1912
Van91I CCANNNNNTGG 1 cut(s) 1630
Vha464I CTTAAG 1 cut(s) 694
VneI GTGCAC 1 cut(s) 708
VpaK11BI GGWCC 4 cut(s) 151, 1079, 1301, 1835
XagI CCTNNNNNAGG 1 cut(s) 1281
XapI RAATTY 1 cut(s) 1593
XbaI TCTAGA 1 cut(s) 566
XceI RCATGY 2 cut(s) 1139, 1205
XcmI CCANNNNNNNNNTGG 2 cut(s) 817, 1173
XmiI GTMKAC 1 cut(s) 1534
XmnI GAANNNNTTC 1 cut(s) 606
XspI CTAG 4 cut(s) 567, 726, 789, 1421
ZrmI AGTACT 1 cut(s) 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.