pycom111g00980

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
OG0012914
Physical Location & Seq
Reverse (-)
632629 .. 634606
1978 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g00980.1

Sequence Viewer

Length: 1206 bp
ATGGCGGGAAAGGAGGAAGCGAAGGGGTGGCGAGGAGCGACCGGTGCCGGCGGCGAAGAGGTCTGCTGGAGAAAGCAAGTGGACGATAACCTGAACAGGCTCCATTCTCTTTCCTTTGGAGCCGAGCTCGCCCTCGAGAGGCACGACTTCTCCTCCGCTCAGATTCTCGGCCTTCGTCTCCTTGGCTTCCTTGACTCCCAATCTCAGTCTTCGCTCGACCACGCCTTCATCCGCCCCATTCGTCGAGAAACCGAAGCCAAACTCCACGCCGCACGCCGCGAGCTCATTCCTCTTTCCGATCGCAAAGTATTTGAGCAAGCAAGGAAGGCGCCGGGCTGTGTTTTTGGCACAAATGGAGATATTGACATTGAGAAGATTAAGCAGTCAAAGTACTTTCAGGCTCTTCTTCAGCAATCTAATAACGGAAGGGCTGCAAATGATTTGGGAGATCAATTGGAGAGGCAGGACAAGTTGACTAGCAAGTTATCGAAGACACAAACAAAGTTGACATCGTTGTACAAACAGAACTCGATGGTGGAAAGTAATGGAAAATCCAAGGGTTCTTTGGCCTCTAGAAGTAACAGCTCTGAGGACTGCTTTGTTGTAGAAAAGCTTCACACTCTCCACAACCGAAGCGGTCATAGTGCCTCTTCTTTTCAAAAAGTTGAAGAGGAAGGAGCTTATGGGAATACCTTTAGGGCTAAACGTGCACACAAGGAATTTACTAGCCCCATCATTGATATAGCGAAGTCCCCATCAGCCAATGAAGATGCTAAAGCTAATGGTTCTGGAAATAGCTTTGTTACTGCCAAAGCCAAATTGGAAATGGATGTGAGGCAAAGAAGAGGGTTAGCGCCAGCGGGATCACCAAATTCTTGTGTCTCTCCTCAAAGTGATGGCAATGCTACTAATAGGGGTTATGGTATGCGATCATATGGTTATTCACGTCGGGGAGCCCGTGGTAATTTTGTCCCCCCTATTAAATCTAATGAGGGAAACGTTGGGAATGTGACTTCACGAGTCGCTGGAAAGTCAGATGATGCATTAGGTGATTCAACTAAGAGATGTTTGGAACTGCTCTGCGGTCCTGATGGAGAGCTTCCAGAAAAACTAAGGAACTTGGAACCTCGTCTTCTTGAGCATGTTAGTAATGAGATTATGGACAAGGATCCTAATGTTCGATGGAATGATATCGGTAATATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000018 GO:0000228 GO:0000280 GO:0000287 GO:0001503 GO:0001649 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006163 GO:0006282 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007140 GO:0007276 GO:0008150 GO:0008152 GO:0008283 GO:0009117 GO:0009123 GO:0009126 GO:0009141 GO:0009144 GO:0009150 GO:0009161 GO:0009167 GO:0009199 GO:0009205 GO:0009259 GO:0009314 GO:0009628 GO:0009892 GO:0009987 GO:0010212 GO:0010520 GO:0010564 GO:0010569 GO:0010605 GO:0010639 GO:0010941 GO:0010948 GO:0016043 GO:0016787 GO:0017144 GO:0019219 GO:0019222 GO:0019637 GO:0019693 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0030154 GO:0031323 GO:0031324 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0033043 GO:0033687 GO:0034641 GO:0040020 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045128 GO:0045786 GO:0045835 GO:0045910 GO:0045934 GO:0046034 GO:0046483 GO:0046872 GO:0048232 GO:0048285 GO:0048471 GO:0048519 GO:0048523 GO:0048583 GO:0048609 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051321 GO:0051445 GO:0051447 GO:0051704 GO:0051716 GO:0051726 GO:0051783 GO:0051784 GO:0055086 GO:0060255 GO:0060548 GO:0060631 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071479 GO:0071704 GO:0071840 GO:0072521 GO:0080090 GO:0080134 GO:0080135 GO:0104004 GO:0110029 GO:0140013 GO:1901135 GO:1901360 GO:1901564 GO:1903046 GO:2000241 GO:2000242 GO:2000779 GO:2001020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA Vps4_C

Protein Analysis

402

Amino Acids

44.01

Weight (kDa)

9.16

Isoelectric Point (pI)

45.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FIGL1_N PF24347 20 - 94 4.3e-37 FIGL1 N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012914)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G27120
fragaria_vesca FvH4_6g53320
malus_domestica MD09G1011500.v1.1 MD17G1012000.v1.1
prunus_persica Prupe.3G305500_v2.0.a1
pyrus_communis pycom111g00980 pycom17g00970
rosa_chinensis RchiOBHm_Chr2g0175481
rosa_laevigata RLG00000022331
rosa_multiflora Rmu_sc0003302.1_g000002 Rmu_sc0021955.1_g000001
rosa_roxburghii Rroxscaffold_2G00077280
rosa_rugosa Rorug02G0585100
rosa_samantha Rh2AG664600 Rh2BG675300 Rh2CG638500 Rh2DG689300
rosa_wichuraiana Rw2G054470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 44, 328
AccBSI CCGCTC 1 cut(s) 158
AccII CGCG 1 cut(s) 279
AciI CCGC 9 cut(s) 5, 51, 156, 232, 270, 277, 636, 860, 1083
AclI AACGTT 1 cut(s) 999
AclWI GGATC 3 cut(s) 871, 1163, 1176
AcsI RAATTY 2 cut(s) 719, 871
AcuI CTGAAG 1 cut(s) 392
AcyI GRCGYC 1 cut(s) 329
AfaI GTAC 2 cut(s) 392, 518
AfiI CCNNNNNNNGG 1 cut(s) 138
AgeI ACCGGT 1 cut(s) 41
AgsI TTSAA 3 cut(s) 659, 668, 1056
AjiI CACGTC 1 cut(s) 947
AluBI AGCT 8 cut(s) 127, 283, 585, 613, 680, 779, 798, 1099
AluI AGCT 8 cut(s) 127, 283, 585, 613, 680, 779, 798, 1099
Alw21I GWGCWC 3 cut(s) 129, 285, 712
Alw26I GTCTC 2 cut(s) 182, 886
Alw44I GTGCAC 1 cut(s) 708
AlwI GGATC 3 cut(s) 871, 1163, 1176
Ama87I CYCGRG 1 cut(s) 134
AoxI GGCC 2 cut(s) 169, 567
ApaLI GTGCAC 1 cut(s) 708
ApeKI GCWGC 1 cut(s) 431
ApoI RAATTY 2 cut(s) 719, 871
AsiGI ACCGGT 1 cut(s) 41
Asp700I GAANNNNTTC 1 cut(s) 612
AspLEI GCGC 2 cut(s) 331, 856
AspS9I GGNCC 1 cut(s) 1085
AsuC2I CCSGG 1 cut(s) 333
AsuHPI GGTGA 2 cut(s) 858, 1061
AvaI CYCGRG 1 cut(s) 134
AvaII GGWCC 1 cut(s) 1085
BaeGI GKGCMC 1 cut(s) 712
BamHI GGATCC 1 cut(s) 1168
BanI GGYRCC 2 cut(s) 44, 328
BanII GRGCYC 3 cut(s) 129, 285, 958
BarI GAAGNNNNNNTAC 2 cut(s) 597, 629
BauI CACGAG 1 cut(s) 1017
BbsI GAAGAC 3 cut(s) 201, 497, 1124
Bbv12I GWGCWC 3 cut(s) 129, 285, 712
BbvI GCAGC 1 cut(s) 418
BccI CCATC 6 cut(s) 526, 740, 763, 890, 1085, 1176
BcnI CCSGG 1 cut(s) 333
BcoDI GTCTC 2 cut(s) 182, 886
BfaI CTAG 3 cut(s) 477, 573, 726
BfoI RGCGCY 2 cut(s) 332, 857
BisI GCNGC 4 cut(s) 52, 270, 277, 432
BlsI GCNGC 4 cut(s) 53, 271, 278, 433
BmcAI AGTACT 1 cut(s) 392
Bme1390I CCNGG 1 cut(s) 333
Bme18I GGWCC 1 cut(s) 1085
BmeT110I CYCGRG 1 cut(s) 134
BmgBI CACGTC 1 cut(s) 947
BmgT120I GGNCC 1 cut(s) 1085
BmiI GGNNCC 7 cut(s) 46, 101, 121, 330, 955, 1125, 1170
BmrFI CCNGG 1 cut(s) 333
BmsI GCATC 2 cut(s) 760, 1030
BpiI GAAGAC 3 cut(s) 201, 497, 1124
BplI GAGNNNNNCTC 2 cut(s) 111, 143
BpmI CTGGAG 1 cut(s) 88
BpuEI CTTGAG 1 cut(s) 1157
BpuMI CCSGG 1 cut(s) 333
BsaHI GRCGYC 1 cut(s) 329
BsaJI CCNNGG 3 cut(s) 181, 555, 958
BsaWI WCCGGW 1 cut(s) 41
BsaXI ACNNNNNCTCC 4 cut(s) 134, 137, 164, 167
Bsc4I CCNNNNNNNGG 1 cut(s) 138
Bse118I RCCGGY 2 cut(s) 41, 47
Bse3DI GCAATG 1 cut(s) 907
BseDI CCNNGG 3 cut(s) 181, 555, 958
BseGI GGATG 2 cut(s) 228, 835
BseLI CCNNNNNNNGG 1 cut(s) 138
BseMI GCAATG 1 cut(s) 907
BseMII CTCAG 3 cut(s) 173, 218, 579
BseRI GAGGAG 3 cut(s) 48, 142, 876
BseSI GKGCMC 1 cut(s) 712
BseXI GCAGC 1 cut(s) 418
Bsh1236I CGCG 1 cut(s) 279
Bsh1285I CGRYCG 2 cut(s) 42, 301
BshFI GGCC 2 cut(s) 171, 569
BshNI GGYRCC 2 cut(s) 44, 328
BshTI ACCGGT 1 cut(s) 41
BsiEI CGRYCG 2 cut(s) 42, 301
BsiHKAI GWGCWC 3 cut(s) 129, 285, 712
BsiHKCI CYCGRG 1 cut(s) 134
BsiSI CCGG 3 cut(s) 42, 48, 332
BslFI GGGAC 2 cut(s) 736, 956
BslI CCNNNNNNNGG 1 cut(s) 138
BsmAI GTCTC 2 cut(s) 182, 886
BsmBI CGTCTC 1 cut(s) 182
BsmFI GGGAC 2 cut(s) 736, 956
BsnI GGCC 2 cut(s) 171, 569
BsoBI CYCGRG 1 cut(s) 134
Bsp1286I GDGCHC 4 cut(s) 129, 285, 712, 958
Bsp1407I TGTACA 1 cut(s) 516
Bsp143I GATC 5 cut(s) 298, 448, 863, 929, 1168
BspACI CCGC 9 cut(s) 5, 51, 156, 232, 270, 277, 636, 860, 1083
BspANI GGCC 2 cut(s) 171, 569
BspCNI CTCAG 3 cut(s) 172, 217, 580
BspFNI CGCG 1 cut(s) 279
BspLI GGNNCC 7 cut(s) 46, 101, 121, 330, 955, 1125, 1170
BspPI GGATC 3 cut(s) 871, 1163, 1176
BspQI GCTCTTC 1 cut(s) 408
BspT107I GGYRCC 2 cut(s) 44, 328
BsrBI CCGCTC 1 cut(s) 158
BsrDI GCAATG 1 cut(s) 907
BsrFI RCCGGY 2 cut(s) 41, 47
BsrGI TGTACA 1 cut(s) 516
BssAI RCCGGY 2 cut(s) 41, 47
BssECI CCNNGG 3 cut(s) 181, 555, 958
BssMI GATC 5 cut(s) 298, 448, 863, 929, 1168
BssNI GRCGYC 1 cut(s) 329
BssSI CACGAG 1 cut(s) 1017
BssT1I CCWWGG 2 cut(s) 181, 555
Bst2BI CACGAG 1 cut(s) 1017
Bst6I CTCTTC 5 cut(s) 51, 408, 655, 663, 838
BstACI GRCGYC 1 cut(s) 329
BstAUI TGTACA 1 cut(s) 516
BstC8I GCNNGC 6 cut(s) 49, 129, 274, 281, 318, 858
BstDEI CTNAG 5 cut(s) 159, 204, 588, 1059, 1112
BstDSI CCRYGG 1 cut(s) 958
BstF5I GGATG 2 cut(s) 228, 835
BstFNI CGCG 1 cut(s) 279
BstH2I RGCGCY 2 cut(s) 332, 857
BstHHI GCGC 2 cut(s) 331, 856
BstKTI GATC 5 cut(s) 301, 451, 866, 932, 1171
BstMAI GTCTC 2 cut(s) 182, 886
BstMBI GATC 5 cut(s) 298, 448, 863, 929, 1168
BstMCI CGRYCG 2 cut(s) 42, 301
BstMWI GCNNNNNNNGC 4 cut(s) 44, 128, 326, 707
BstNSI RCATGY 1 cut(s) 1145
BstSCI CCNGG 1 cut(s) 331
BstSLI GKGCMC 1 cut(s) 712
BstUI CGCG 1 cut(s) 279
BstV1I GCAGC 1 cut(s) 418
BstV2I GAAGAC 3 cut(s) 201, 497, 1124
BstX2I RGATCY 1 cut(s) 1168
BstYI RGATCY 1 cut(s) 1168
BsuRI GGCC 2 cut(s) 171, 569
BtgI CCRYGG 1 cut(s) 958
BtrI CACGTC 1 cut(s) 947
BtsCI GGATG 2 cut(s) 228, 835
Cac8I GCNNGC 6 cut(s) 49, 129, 274, 281, 318, 858
CfoI GCGC 2 cut(s) 331, 856
Cfr10I RCCGGY 2 cut(s) 41, 47
Cfr13I GGNCC 1 cut(s) 1085
Csp6I GTAC 2 cut(s) 391, 517
CspAI ACCGGT 1 cut(s) 41
CviAII CATG 1 cut(s) 1142
CviQI GTAC 2 cut(s) 391, 517
DdeI CTNAG 5 cut(s) 159, 204, 588, 1059, 1112
DinI GGCGCC 1 cut(s) 330
DpnI GATC 5 cut(s) 300, 450, 865, 931, 1170
DpnII GATC 5 cut(s) 298, 448, 863, 929, 1168
Eam1104I CTCTTC 5 cut(s) 51, 408, 655, 663, 838
EarI CTCTTC 5 cut(s) 51, 408, 655, 663, 838
EciI GGCGGA 1 cut(s) 221
Ecl136II GAGCTC 2 cut(s) 127, 283
Eco130I CCWWGG 2 cut(s) 181, 555
Eco24I GRGCYC 3 cut(s) 129, 285, 958
Eco32I GATATC 1 cut(s) 1192
Eco47I GGWCC 1 cut(s) 1085
Eco53kI GAGCTC 2 cut(s) 127, 283
Eco57I CTGAAG 1 cut(s) 392
Eco88I CYCGRG 1 cut(s) 134
EcoICRI GAGCTC 2 cut(s) 127, 283
EcoRV GATATC 1 cut(s) 1192
EcoT14I CCWWGG 2 cut(s) 181, 555
EcoT22I ATGCAT 1 cut(s) 1045
EcoT38I GRGCYC 3 cut(s) 129, 285, 958
EgeI GGCGCC 1 cut(s) 330
EheI GGCGCC 1 cut(s) 330
ErhI CCWWGG 2 cut(s) 181, 555
Esp3I CGTCTC 1 cut(s) 182
FaeI CATG 1 cut(s) 1145
FaqI GGGAC 2 cut(s) 736, 956
FatI CATG 1 cut(s) 1141
FauI CCCGC 1 cut(s) 853
FauNDI CATATG 1 cut(s) 934
Fnu4HI GCNGC 4 cut(s) 52, 270, 277, 432
FokI GGATG 2 cut(s) 215, 842
FriOI GRGCYC 3 cut(s) 129, 285, 958
Fsp4HI GCNGC 4 cut(s) 52, 270, 277, 432
FspBI CTAG 3 cut(s) 477, 573, 726
GlaI GCGC 2 cut(s) 330, 855
GluI GCNGC 4 cut(s) 52, 270, 277, 432
GsuI CTGGAG 1 cut(s) 88
HaeII RGCGCY 2 cut(s) 332, 857
HaeIII GGCC 2 cut(s) 171, 569
HapII CCGG 3 cut(s) 42, 48, 332
HhaI GCGC 2 cut(s) 331, 856
Hin1I GRCGYC 1 cut(s) 329
Hin1II CATG 1 cut(s) 1145
Hin6I GCGC 2 cut(s) 329, 854
HinP1I GCGC 2 cut(s) 329, 854
HincII GTYRAC 2 cut(s) 474, 507
HindII GTYRAC 2 cut(s) 474, 507
HindIII AAGCTT 1 cut(s) 611
HinfI GANTC 4 cut(s) 163, 194, 1020, 1052
HpaII CCGG 3 cut(s) 42, 48, 332
HphI GGTGA 2 cut(s) 858, 1061
Hpy166II GTNNAC 4 cut(s) 82, 474, 507, 710
Hpy188I TCNGA 4 cut(s) 162, 298, 589, 1036
Hpy188III TCNNGA 8 cut(s) 136, 245, 573, 789, 1017, 1088, 1103, 1136
Hpy8I GTNNAC 4 cut(s) 82, 474, 507, 710
Hpy99I CGWCG 2 cut(s) 246, 951
HpyAV CCTTC 6 cut(s) 16, 182, 235, 319, 420, 668
HpyCH4IV ACGT 3 cut(s) 706, 946, 999
HpyCH4V TGCA 3 cut(s) 434, 710, 1043
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 128, 326, 707
HpyF3I CTNAG 5 cut(s) 159, 204, 588, 1059, 1112
HpySE526I ACGT 3 cut(s) 706, 946, 999
Hsp92I GRCGYC 1 cut(s) 329
Hsp92II CATG 1 cut(s) 1145
HspAI GCGC 2 cut(s) 329, 854
KasI GGCGCC 1 cut(s) 328
KroI GCCGGC 1 cut(s) 47
KroNI GCCGGC 1 cut(s) 49
Kzo9I GATC 5 cut(s) 298, 448, 863, 929, 1168
LguI GCTCTTC 1 cut(s) 408
LmnI GCTCC 5 cut(s) 35, 105, 119, 677, 953
Lsp1109I GCAGC 1 cut(s) 418
LweI GCATC 2 cut(s) 760, 1030
MaeI CTAG 3 cut(s) 477, 573, 726
MaeII ACGT 3 cut(s) 706, 946, 999
MaeIII GTNAC 3 cut(s) 578, 802, 1009
MalI GATC 5 cut(s) 300, 450, 865, 931, 1170
MbiI CCGCTC 1 cut(s) 158
MboI GATC 5 cut(s) 298, 448, 863, 929, 1168
MfeI CAATTG 1 cut(s) 452
MflI RGATCY 1 cut(s) 1168
MhlI GDGCHC 4 cut(s) 129, 285, 712, 958
MluCI AATT 5 cut(s) 452, 719, 818, 871, 964
Mly113I GGCGCC 1 cut(s) 329
MlyI GAGTC 2 cut(s) 188, 1029
Mph1103I ATGCAT 1 cut(s) 1045
MroNI GCCGGC 1 cut(s) 47
MroXI GAANNNNTTC 1 cut(s) 612
MseI TTAA 2 cut(s) 378, 981
MspA1I CMGCKG 1 cut(s) 860
MspI CCGG 3 cut(s) 42, 48, 332
MspR9I CCNGG 1 cut(s) 333
MunI CAATTG 1 cut(s) 452
MvnI CGCG 1 cut(s) 279
MwoI GCNNNNNNNGC 4 cut(s) 44, 128, 326, 707
NaeI GCCGGC 1 cut(s) 49
NarI GGCGCC 1 cut(s) 329
NciI CCSGG 1 cut(s) 333
NdeI CATATG 1 cut(s) 934
NdeII GATC 5 cut(s) 298, 448, 863, 929, 1168
NgoMIV GCCGGC 1 cut(s) 47
NlaIII CATG 1 cut(s) 1145
NlaIV GGNNCC 7 cut(s) 46, 101, 121, 330, 955, 1125, 1170
NmeAIII GCCGAG 2 cut(s) 147, 148
NmuCI GTSAC 1 cut(s) 1009
NsiI ATGCAT 1 cut(s) 1045
NspI RCATGY 1 cut(s) 1145
PaeR7I CTCGAG 1 cut(s) 134
PciSI GCTCTTC 1 cut(s) 408
PcsI WCGNNNNNNNCGW 2 cut(s) 141, 955
PdiI GCCGGC 1 cut(s) 49
PdmI GAANNNNTTC 1 cut(s) 612
PfeI GAWTC 2 cut(s) 163, 1052
PinAI ACCGGT 1 cut(s) 41
PkrI GCNGC 4 cut(s) 53, 271, 278, 433
Ple19I CGATCG 1 cut(s) 301
PleI GAGTC 2 cut(s) 188, 1028
PluTI GGCGCC 1 cut(s) 332
PpsI GAGTC 2 cut(s) 188, 1028
Psp124BI GAGCTC 2 cut(s) 129, 285
Psp1406I AACGTT 1 cut(s) 999
PspN4I GGNNCC 7 cut(s) 46, 101, 121, 330, 955, 1125, 1170
PspPI GGNCC 1 cut(s) 1085
PsuI RGATCY 1 cut(s) 1168
PvuI CGATCG 1 cut(s) 301
RsaI GTAC 2 cut(s) 392, 518
RsaNI GTAC 2 cut(s) 391, 517
SacI GAGCTC 2 cut(s) 129, 285
SapI GCTCTTC 1 cut(s) 408
SaqAI TTAA 2 cut(s) 378, 981
SatI GCNGC 4 cut(s) 52, 270, 277, 432
Sau3AI GATC 5 cut(s) 298, 448, 863, 929, 1168
Sau96I GGNCC 1 cut(s) 1085
ScaI AGTACT 1 cut(s) 392
SchI GAGTC 2 cut(s) 188, 1029
ScrFI CCNGG 1 cut(s) 333
SduI GDGCHC 4 cut(s) 129, 285, 712, 958
SfaNI GCATC 2 cut(s) 760, 1030
SfoI GGCGCC 1 cut(s) 330
Sfr274I CTCGAG 1 cut(s) 134
SinI GGWCC 1 cut(s) 1085
SlaI CTCGAG 1 cut(s) 134
SmlI CTYRAG 2 cut(s) 134, 1136
SmoI CTYRAG 2 cut(s) 134, 1136
Sse9I AATT 5 cut(s) 452, 719, 818, 871, 964
SsiI CCGC 9 cut(s) 5, 51, 156, 232, 270, 277, 636, 860, 1083
SspDI GGCGCC 1 cut(s) 328
SspMI CTAG 3 cut(s) 477, 573, 726
SstI GAGCTC 2 cut(s) 129, 285
StyD4I CCNGG 1 cut(s) 331
StyI CCWWGG 2 cut(s) 181, 555
TaiI ACGT 3 cut(s) 709, 949, 1002
TaqI TCGA 6 cut(s) 135, 216, 244, 488, 530, 1180
TasI AATT 5 cut(s) 452, 719, 818, 871, 964
TatI WGTACW 2 cut(s) 390, 516
TauI GCSGC 3 cut(s) 54, 272, 279
TfiI GAWTC 2 cut(s) 163, 1052
Tru1I TTAA 2 cut(s) 378, 981
Tru9I TTAA 2 cut(s) 378, 981
TseFI GTSAC 1 cut(s) 1009
TseI GCWGC 1 cut(s) 431
Tsp45I GTSAC 1 cut(s) 1009
TspDTI ATGAA 2 cut(s) 217, 780
TspGWI ACGGA 1 cut(s) 438
VneI GTGCAC 1 cut(s) 708
VpaK11BI GGWCC 1 cut(s) 1085
XapI RAATTY 2 cut(s) 719, 871
XbaI TCTAGA 1 cut(s) 572
XceI RCATGY 1 cut(s) 1145
XcmI CCANNNNNNNNNTGG 3 cut(s) 562, 817, 823
XhoI CTCGAG 1 cut(s) 134
XmnI GAANNNNTTC 1 cut(s) 612
XspI CTAG 3 cut(s) 477, 573, 726
ZrmI AGTACT 1 cut(s) 392
Zsp2I ATGCAT 1 cut(s) 1045
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.