U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G47740 AT5G47740 |
| fragaria_vesca | FvH4_3g00270 FvH4_3g00270 FvH4_3g00270 |
| malus_domestica | MD05G1362400.v1.1 |
| prunus_persica | Prupe.4G003000_v2.0.a1 |
| pyrus_communis | pycom05g32880 |
| rosa_chinensis | RchiOBHm_Chr5g0000401 |
| rosa_laevigata | RLG00000030863 |
| rosa_multiflora | Rmu_sc0017532.1_g000001 Rmu_ssc0000181.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00075760 |
| rosa_rugosa | Rorug04G0383300 |
| rosa_samantha | Rh5AG003100 Rh5BG004300 Rh5CG003300 Rh5DG003300 |
| rosa_wichuraiana | Rw5G000320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 237 |
| AciI | CCGC | 2 cut(s) | 540, 690 |
| AclWI | GGATC | 3 cut(s) | 147, 403, 806 |
| AfaI | GTAC | 1 cut(s) | 639 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 663 |
| AgsI | TTSAA | 6 cut(s) | 132, 138, 144, 575, 713, 863 |
| AjiI | CACGTC | 1 cut(s) | 800 |
| AjnI | CCWGG | 3 cut(s) | 174, 341, 774 |
| AluBI | AGCT | 6 cut(s) | 78, 208, 439, 511, 698, 716 |
| AluI | AGCT | 6 cut(s) | 78, 208, 439, 511, 698, 716 |
| Alw21I | GWGCWC | 1 cut(s) | 513 |
| Alw26I | GTCTC | 1 cut(s) | 806 |
| AlwI | GGATC | 3 cut(s) | 147, 403, 806 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 78 |
| AoxI | GGCC | 2 cut(s) | 177, 483 |
| ApeKI | GCWGC | 8 cut(s) | 72, 75, 78, 147, 285, 359, 542, 716 |
| AspLEI | GCGC | 1 cut(s) | 337 |
| AspS9I | GGNCC | 2 cut(s) | 484, 772 |
| AsuC2I | CCSGG | 1 cut(s) | 404 |
| AvaII | GGWCC | 1 cut(s) | 772 |
| BanII | GRGCYC | 1 cut(s) | 513 |
| Bbv12I | GWGCWC | 1 cut(s) | 513 |
| BbvI | GCAGC | 8 cut(s) | 65, 84, 87, 159, 297, 346, 529, 703 |
| BccI | CCATC | 3 cut(s) | 247, 251, 719 |
| BciT130I | CCWGG | 3 cut(s) | 176, 343, 776 |
| BclI | TGATCA | 3 cut(s) | 16, 274, 700 |
| BcnI | CCSGG | 1 cut(s) | 404 |
| BcoDI | GTCTC | 1 cut(s) | 806 |
| BfaI | CTAG | 3 cut(s) | 602, 635, 910 |
| BfoI | RGCGCY | 1 cut(s) | 338 |
| BfuAI | ACCTGC | 1 cut(s) | 237 |
| BisI | GCNGC | 8 cut(s) | 73, 76, 79, 148, 286, 360, 543, 717 |
| BlsI | GCNGC | 8 cut(s) | 74, 77, 80, 149, 287, 361, 544, 718 |
| BmcAI | AGTACT | 1 cut(s) | 639 |
| Bme1390I | CCNGG | 4 cut(s) | 176, 343, 404, 776 |
| Bme18I | GGWCC | 1 cut(s) | 772 |
| BmgBI | CACGTC | 1 cut(s) | 800 |
| BmgT120I | GGNCC | 2 cut(s) | 484, 772 |
| BmiI | GGNNCC | 1 cut(s) | 758 |
| BmrFI | CCNGG | 4 cut(s) | 176, 343, 404, 776 |
| BmsI | GCATC | 1 cut(s) | 885 |
| BpuMI | CCSGG | 1 cut(s) | 404 |
| BsaBI | GATNNNNATC | 4 cut(s) | 15, 157, 267, 740 |
| BsaJI | CCNNGG | 3 cut(s) | 174, 191, 751 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 521, 551 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 663 |
| Bse8I | GATNNNNATC | 4 cut(s) | 15, 157, 267, 740 |
| BseBI | CCWGG | 3 cut(s) | 176, 343, 776 |
| BseDI | CCNNGG | 3 cut(s) | 174, 191, 751 |
| BseGI | GGATG | 3 cut(s) | 115, 239, 371 |
| BseJI | GATNNNNATC | 4 cut(s) | 15, 157, 267, 740 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 663 |
| BseRI | GAGGAG | 4 cut(s) | 119, 131, 134, 517 |
| BseXI | GCAGC | 8 cut(s) | 65, 84, 87, 159, 297, 346, 529, 703 |
| BsgI | GTGCAG | 1 cut(s) | 702 |
| BshFI | GGCC | 2 cut(s) | 179, 485 |
| BsiHKAI | GWGCWC | 1 cut(s) | 513 |
| BsiSI | CCGG | 1 cut(s) | 404 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 663 |
| BsmAI | GTCTC | 1 cut(s) | 806 |
| BsmBI | CGTCTC | 1 cut(s) | 806 |
| BsnI | GGCC | 2 cut(s) | 179, 485 |
| Bsp1286I | GDGCHC | 1 cut(s) | 513 |
| BspACI | CCGC | 2 cut(s) | 540, 690 |
| BspANI | GGCC | 2 cut(s) | 179, 485 |
| BspHI | TCATGA | 2 cut(s) | 271, 765 |
| BspLI | GGNNCC | 1 cut(s) | 758 |
| BspMI | ACCTGC | 1 cut(s) | 237 |
| BspPI | GGATC | 3 cut(s) | 147, 403, 806 |
| BssECI | CCNNGG | 3 cut(s) | 174, 191, 751 |
| BssT1I | CCWWGG | 2 cut(s) | 191, 751 |
| Bst2UI | CCWGG | 3 cut(s) | 176, 343, 776 |
| Bst4CI | ACNGT | 3 cut(s) | 68, 382, 565 |
| Bst6I | CTCTTC | 1 cut(s) | 904 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 78 |
| BstC8I | GCNNGC | 1 cut(s) | 357 |
| BstDEI | CTNAG | 1 cut(s) | 662 |
| BstF5I | GGATG | 3 cut(s) | 115, 239, 371 |
| BstH2I | RGCGCY | 1 cut(s) | 338 |
| BstHHI | GCGC | 1 cut(s) | 337 |
| BstMAI | GTCTC | 1 cut(s) | 806 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 78, 291, 324 |
| BstNI | CCWGG | 3 cut(s) | 176, 343, 776 |
| BstSCI | CCNGG | 4 cut(s) | 174, 341, 402, 774 |
| BstV1I | GCAGC | 8 cut(s) | 65, 84, 87, 159, 297, 346, 529, 703 |
| BstX2I | RGATCY | 2 cut(s) | 152, 408 |
| BstYI | RGATCY | 2 cut(s) | 152, 408 |
| BsuRI | GGCC | 2 cut(s) | 179, 485 |
| BtrI | CACGTC | 1 cut(s) | 800 |
| BtsCI | GGATG | 3 cut(s) | 115, 239, 371 |
| BtsIMutI | CAGTG | 1 cut(s) | 561 |
| BveI | ACCTGC | 1 cut(s) | 237 |
| Cac8I | GCNNGC | 1 cut(s) | 357 |
| CaiI | CAGNNNCTG | 1 cut(s) | 78 |
| CciI | TCATGA | 2 cut(s) | 271, 765 |
| CfoI | GCGC | 1 cut(s) | 337 |
| Cfr13I | GGNCC | 2 cut(s) | 484, 772 |
| Csp6I | GTAC | 1 cut(s) | 638 |
| CviAII | CATG | 8 cut(s) | 93, 235, 272, 328, 395, 481, 766, 873 |
| CviQI | GTAC | 1 cut(s) | 638 |
| DdeI | CTNAG | 1 cut(s) | 662 |
| DraI | TTTAAA | 1 cut(s) | 886 |
| Eam1104I | CTCTTC | 1 cut(s) | 904 |
| EarI | CTCTTC | 1 cut(s) | 904 |
| Ecl136II | GAGCTC | 1 cut(s) | 511 |
| Eco130I | CCWWGG | 2 cut(s) | 191, 751 |
| Eco24I | GRGCYC | 1 cut(s) | 513 |
| Eco32I | GATATC | 1 cut(s) | 187 |
| Eco47I | GGWCC | 1 cut(s) | 772 |
| Eco53kI | GAGCTC | 1 cut(s) | 511 |
| EcoICRI | GAGCTC | 1 cut(s) | 511 |
| EcoRII | CCWGG | 3 cut(s) | 174, 341, 774 |
| EcoRV | GATATC | 1 cut(s) | 187 |
| EcoT14I | CCWWGG | 2 cut(s) | 191, 751 |
| EcoT22I | ATGCAT | 1 cut(s) | 878 |
| EcoT38I | GRGCYC | 1 cut(s) | 513 |
| ErhI | CCWWGG | 2 cut(s) | 191, 751 |
| Esp3I | CGTCTC | 1 cut(s) | 806 |
| FaeI | CATG | 8 cut(s) | 96, 238, 275, 331, 398, 484, 769, 876 |
| FatI | CATG | 8 cut(s) | 92, 234, 271, 327, 394, 480, 765, 872 |
| FauI | CCCGC | 1 cut(s) | 683 |
| FbaI | TGATCA | 3 cut(s) | 16, 274, 700 |
| Fnu4HI | GCNGC | 8 cut(s) | 73, 76, 79, 148, 286, 360, 543, 717 |
| FokI | GGATG | 3 cut(s) | 122, 226, 358 |
| FriOI | GRGCYC | 1 cut(s) | 513 |
| Fsp4HI | GCNGC | 8 cut(s) | 73, 76, 79, 148, 286, 360, 543, 717 |
| FspBI | CTAG | 3 cut(s) | 602, 635, 910 |
| GlaI | GCGC | 1 cut(s) | 336 |
| GluI | GCNGC | 8 cut(s) | 73, 76, 79, 148, 286, 360, 543, 717 |
| HaeII | RGCGCY | 1 cut(s) | 338 |
| HaeIII | GGCC | 2 cut(s) | 179, 485 |
| HapII | CCGG | 1 cut(s) | 404 |
| HhaI | GCGC | 1 cut(s) | 337 |
| Hin1II | CATG | 8 cut(s) | 96, 238, 275, 331, 398, 484, 769, 876 |
| Hin6I | GCGC | 1 cut(s) | 335 |
| HinP1I | GCGC | 1 cut(s) | 335 |
| HincII | GTYRAC | 1 cut(s) | 559 |
| HindII | GTYRAC | 1 cut(s) | 559 |
| HindIII | AAGCTT | 1 cut(s) | 437 |
| HinfI | GANTC | 4 cut(s) | 306, 320, 448, 781 |
| HpaII | CCGG | 1 cut(s) | 404 |
| Hpy166II | GTNNAC | 2 cut(s) | 461, 559 |
| Hpy188I | TCNGA | 2 cut(s) | 7, 705 |
| Hpy188III | TCNNGA | 5 cut(s) | 162, 272, 602, 739, 766 |
| Hpy8I | GTNNAC | 2 cut(s) | 461, 559 |
| HpyAV | CCTTC | 1 cut(s) | 524 |
| HpyCH4III | ACNGT | 3 cut(s) | 68, 382, 565 |
| HpyCH4IV | ACGT | 1 cut(s) | 799 |
| HpyCH4V | TGCA | 5 cut(s) | 81, 545, 719, 835, 876 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 78, 291, 324 |
| HpyF3I | CTNAG | 1 cut(s) | 662 |
| HpySE526I | ACGT | 1 cut(s) | 799 |
| Hsp92II | CATG | 8 cut(s) | 96, 238, 275, 331, 398, 484, 769, 876 |
| HspAI | GCGC | 1 cut(s) | 335 |
| Ksp22I | TGATCA | 3 cut(s) | 16, 274, 700 |
| LmnI | GCTCC | 2 cut(s) | 516, 542 |
| Lsp1109I | GCAGC | 8 cut(s) | 65, 84, 87, 159, 297, 346, 529, 703 |
| LweI | GCATC | 1 cut(s) | 885 |
| MaeI | CTAG | 3 cut(s) | 602, 635, 910 |
| MaeII | ACGT | 1 cut(s) | 799 |
| MboII | GAAGA | 4 cut(s) | 20, 177, 263, 891 |
| MflI | RGATCY | 2 cut(s) | 152, 408 |
| MhlI | GDGCHC | 1 cut(s) | 513 |
| MluCI | AATT | 2 cut(s) | 21, 668 |
| MlyI | GAGTC | 3 cut(s) | 315, 329, 457 |
| Mph1103I | ATGCAT | 1 cut(s) | 878 |
| MseI | TTAA | 4 cut(s) | 24, 350, 552, 885 |
| MspA1I | CMGCKG | 2 cut(s) | 78, 542 |
| MspI | CCGG | 1 cut(s) | 404 |
| MspR9I | CCNGG | 4 cut(s) | 176, 343, 404, 776 |
| MvaI | CCWGG | 3 cut(s) | 176, 343, 776 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 78, 291, 324 |
| NciI | CCSGG | 1 cut(s) | 404 |
| NlaIII | CATG | 8 cut(s) | 96, 238, 275, 331, 398, 484, 769, 876 |
| NlaIV | GGNNCC | 1 cut(s) | 758 |
| NsiI | ATGCAT | 1 cut(s) | 878 |
| PagI | TCATGA | 2 cut(s) | 271, 765 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 315, 776 |
| PfeI | GAWTC | 1 cut(s) | 781 |
| PflFI | GACNNNGTC | 1 cut(s) | 826 |
| PfoI | TCCNGGA | 1 cut(s) | 402 |
| PkrI | GCNGC | 8 cut(s) | 74, 77, 80, 149, 287, 361, 544, 718 |
| PleI | GAGTC | 3 cut(s) | 314, 328, 456 |
| PpsI | GAGTC | 3 cut(s) | 314, 328, 456 |
| Psp124BI | GAGCTC | 1 cut(s) | 513 |
| Psp6I | CCWGG | 3 cut(s) | 174, 341, 774 |
| PspGI | CCWGG | 3 cut(s) | 174, 341, 774 |
| PspN4I | GGNNCC | 1 cut(s) | 758 |
| PspPI | GGNCC | 2 cut(s) | 484, 772 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 209, 241 |
| PstNI | CAGNNNCTG | 1 cut(s) | 78 |
| PsuI | RGATCY | 2 cut(s) | 152, 408 |
| PsyI | GACNNNGTC | 1 cut(s) | 826 |
| PvuII | CAGCTG | 1 cut(s) | 78 |
| RsaI | GTAC | 1 cut(s) | 639 |
| RsaNI | GTAC | 1 cut(s) | 638 |
| SacI | GAGCTC | 1 cut(s) | 513 |
| SaqAI | TTAA | 4 cut(s) | 24, 350, 552, 885 |
| SatI | GCNGC | 8 cut(s) | 73, 76, 79, 148, 286, 360, 543, 717 |
| Sau96I | GGNCC | 2 cut(s) | 484, 772 |
| ScaI | AGTACT | 1 cut(s) | 639 |
| SchI | GAGTC | 3 cut(s) | 315, 329, 457 |
| ScrFI | CCNGG | 4 cut(s) | 176, 343, 404, 776 |
| SduI | GDGCHC | 1 cut(s) | 513 |
| SfaNI | GCATC | 1 cut(s) | 885 |
| SinI | GGWCC | 1 cut(s) | 772 |
| Sse9I | AATT | 2 cut(s) | 21, 668 |
| SsiI | CCGC | 2 cut(s) | 540, 690 |
| SspI | AATATT | 1 cut(s) | 859 |
| SspMI | CTAG | 3 cut(s) | 602, 635, 910 |
| SstI | GAGCTC | 1 cut(s) | 513 |
| StyD4I | CCNGG | 4 cut(s) | 174, 341, 402, 774 |
| StyI | CCWWGG | 2 cut(s) | 191, 751 |
| TaaI | ACNGT | 3 cut(s) | 68, 382, 565 |
| TaiI | ACGT | 1 cut(s) | 802 |
| TaqI | TCGA | 1 cut(s) | 102 |
| TasI | AATT | 2 cut(s) | 21, 668 |
| TatI | WGTACW | 1 cut(s) | 637 |
| TfiI | GAWTC | 1 cut(s) | 781 |
| Tru1I | TTAA | 4 cut(s) | 24, 350, 552, 885 |
| Tru9I | TTAA | 4 cut(s) | 24, 350, 552, 885 |
| TscAI | CASTG | 1 cut(s) | 568 |
| TseI | GCWGC | 8 cut(s) | 72, 75, 78, 147, 285, 359, 542, 716 |
| TspDTI | ATGAA | 3 cut(s) | 383, 406, 861 |
| TspGWI | ACGGA | 1 cut(s) | 785 |
| TspRI | CASTG | 1 cut(s) | 568 |
| Tth111I | GACNNNGTC | 1 cut(s) | 826 |
| VpaK11BI | GGWCC | 1 cut(s) | 772 |
| XbaI | TCTAGA | 1 cut(s) | 601 |
| XspI | CTAG | 3 cut(s) | 602, 635, 910 |
| ZrmI | AGTACT | 1 cut(s) | 639 |
| Zsp2I | ATGCAT | 1 cut(s) | 878 |