Prupe.4G017500_v2.0.a1

Wall-associated receptor kinase galacturonan-binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0010019
Physical Location & Seq
Reverse (-)
815501 .. 817089
1589 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G017500.1

Sequence Viewer

Length: 1044 bp
ATGTCTCCTCTAATACCTGTTCTCTTCACTCGCAGAAAACTCATCACTGCATATCAAAACAGCCCTTCAATATCAACTTCTATGACATTTACATTTGTCCTTCTCATTTTCCTCACCCATCCTTTTCTCACCCTCACAGCAACTCAAGCCAGCCTCTGCAGAACTTCTTGCGGCAACATTCCAATCAACTATCCTTTTGGCATTGACGATGGCTGCGGCAGCCCTTACTACAAAAACCTACTGGTCTGCTCCGGTTTGTCGAAACTCGAGCTCCGAACACCTTCTGGAAGATACCCTGTTAAGTCCATAAGCTACTCTGACCCTCACATTCTTGTCACCGATCCTTTCATGTGGAATTGCCAAGATGGTGACGATTTTAGAGCCACAAGGCCTTTTAGCCTCGACACCAGCACGCACTTATCACTCTCCTCTCAAAACGACTACCTTTTCTTCAACTGCAGTGAACAAAACGTCATCATTGAGCCAAAGCCCGTCTTCTGCGAGAGGTTTCCAGAGAGGTGTGACTCGTCCTGTGACAGCTCCAGTTATCTTTGCAGGCACTTACCCGAGTGTGCCTTGGCATTGAGGACCAGTTCCTGCTGTTCTTATTATCCCAAAGCCACCGAGTCTCTGAGGCTGATGTTGAAATATTGTGCAAGTTATACTAGTGTGTATTGGAGGAACACGGGGGAAAACCAGCCTGATGATCAAGTCCCCGAATACGGGATTCGGGTCGATTTTGATATTCCGGTGACCACCCGTTGCCTTCAGTGTCAGGACACATCCAAAGGTGGCGGGATGTGTGGATTCGACACCTCAACGCAGAATTTCTTGTGCTTATGTGACCGGGGCAACGTGACTACTTATTGTAAAGATCATAGCATTTCTCAGCATAGGAGGAATACTGTAATTGCAGGGACTGTTACTGGAGTGTCGGTTGTAGGAGCCTTCGGAGTTGGGGCTGGAATTTGGTACTTGAAGAAAGTGAAAGCTAAAGCACCAGTGACATGTGGGGTTCAAAGCAATGAGAATAGGCTTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind

Protein Analysis

348

Amino Acids

38.66

Weight (kDa)

7.99

Isoelectric Point (pI)

45.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 171, 216, 795
AclWI GGATC 1 cut(s) 335
AcsI RAATTY 2 cut(s) 826, 966
AcuI CTGAAG 1 cut(s) 752
AfaI GTAC 1 cut(s) 974
AfiI CCNNNNNNNGG 2 cut(s) 722, 723
AflIII ACRYGT 1 cut(s) 1007
AgsI TTSAA 5 cut(s) 69, 454, 646, 979, 1019
AhlI ACTAGT 1 cut(s) 665
AluBI AGCT 4 cut(s) 271, 312, 540, 992
AluI AGCT 4 cut(s) 271, 312, 540, 992
Alw21I GWGCWC 1 cut(s) 273
Alw26I GTCTC 2 cut(s) 9, 633
AlwI GGATC 1 cut(s) 335
AlwNI CAGNNNCTG 3 cut(s) 156, 597, 920
Ama87I CYCGRG 2 cut(s) 266, 566
AoxI GGCC 1 cut(s) 389
ApeKI GCWGC 2 cut(s) 213, 219
ApoI RAATTY 2 cut(s) 826, 966
Asp700I GAANNNNTTC 1 cut(s) 280
AspS9I GGNCC 1 cut(s) 588
AsuC2I CCSGG 1 cut(s) 848
AsuHPI GGTGA 5 cut(s) 106, 121, 328, 380, 763
AvaI CYCGRG 2 cut(s) 266, 566
AvaII GGWCC 1 cut(s) 588
BanII GRGCYC 1 cut(s) 273
BbsI GAAGAC 1 cut(s) 487
Bbv12I GWGCWC 1 cut(s) 273
BbvI GCAGC 2 cut(s) 200, 231
BccI CCATC 3 cut(s) 126, 203, 359
BclI TGATCA 1 cut(s) 706
BcnI CCSGG 1 cut(s) 848
BcoDI GTCTC 2 cut(s) 9, 633
BcuI ACTAGT 1 cut(s) 665
BfaI CTAG 1 cut(s) 666
BfmI CTRYAG 2 cut(s) 157, 457
BisI GCNGC 4 cut(s) 172, 214, 217, 220
BlsI GCNGC 4 cut(s) 173, 215, 218, 221
Bme1390I CCNGG 1 cut(s) 848
Bme18I GGWCC 1 cut(s) 588
BmeT110I CYCGRG 2 cut(s) 266, 566
BmgT120I GGNCC 1 cut(s) 588
BmiI GGNNCC 1 cut(s) 946
BmrFI CCNGG 1 cut(s) 848
BpiI GAAGAC 1 cut(s) 487
BpmI CTGGAG 2 cut(s) 526, 948
BpuEI CTTGAG 1 cut(s) 129
BpuMI CCSGG 1 cut(s) 848
BsaJI CCNNGG 2 cut(s) 576, 847
BsaWI WCCGGW 2 cut(s) 251, 748
BsaXI ACNNNNNCTCC 4 cut(s) 255, 285, 921, 951
Bsc4I CCNNNNNNNGG 2 cut(s) 722, 723
Bse1I ACTGG 5 cut(s) 246, 543, 591, 931, 1001
Bse3DI GCAATG 1 cut(s) 1030
BseDI CCNNGG 2 cut(s) 576, 847
BseGI GGATG 3 cut(s) 118, 782, 804
BseLI CCNNNNNNNGG 2 cut(s) 722, 723
BseMI GCAATG 1 cut(s) 1030
BseMII CTCAG 2 cut(s) 623, 902
BseNI ACTGG 5 cut(s) 246, 543, 591, 931, 1001
BseRI GAGGAG 1 cut(s) 418
BseXI GCAGC 2 cut(s) 200, 231
BshFI GGCC 1 cut(s) 391
BsiHKAI GWGCWC 1 cut(s) 273
BsiHKCI CYCGRG 2 cut(s) 266, 566
BsiSI CCGG 3 cut(s) 252, 749, 847
BslFI GGGAC 2 cut(s) 698, 931
BslI CCNNNNNNNGG 2 cut(s) 722, 723
BsmAI GTCTC 2 cut(s) 9, 633
BsmFI GGGAC 2 cut(s) 698, 931
BsnI GGCC 1 cut(s) 391
BsoBI CYCGRG 2 cut(s) 266, 566
Bsp1286I GDGCHC 1 cut(s) 273
Bsp143I GATC 3 cut(s) 340, 706, 874
BspACI CCGC 3 cut(s) 171, 216, 795
BspANI GGCC 1 cut(s) 391
BspCNI CTCAG 2 cut(s) 624, 901
BspLI GGNNCC 1 cut(s) 946
BspMAI CTGCAG 2 cut(s) 161, 461
BspPI GGATC 1 cut(s) 335
BsrDI GCAATG 1 cut(s) 1030
BsrI ACTGG 5 cut(s) 246, 543, 591, 931, 1001
BssECI CCNNGG 2 cut(s) 576, 847
BssMI GATC 3 cut(s) 340, 706, 874
BssT1I CCWWGG 1 cut(s) 576
Bst4CI ACNGT 2 cut(s) 907, 922
Bst6I CTCTTC 1 cut(s) 29
BstC8I GCNNGC 3 cut(s) 151, 413, 557
BstDEI CTNAG 2 cut(s) 632, 888
BstEII GGTNACC 1 cut(s) 751
BstF5I GGATG 3 cut(s) 118, 782, 804
BstKTI GATC 3 cut(s) 343, 709, 877
BstMAI GTCTC 2 cut(s) 9, 633
BstMBI GATC 3 cut(s) 340, 706, 874
BstMWI GCNNNNNNNGC 2 cut(s) 146, 219
BstNSI RCATGY 1 cut(s) 1011
BstPI GGTNACC 1 cut(s) 751
BstSCI CCNGG 1 cut(s) 846
BstSFI CTRYAG 2 cut(s) 157, 457
BstV1I GCAGC 2 cut(s) 200, 231
BstV2I GAAGAC 1 cut(s) 487
BsuRI GGCC 1 cut(s) 391
BtsCI GGATG 3 cut(s) 118, 782, 804
BtsI GCAGTG 2 cut(s) 45, 466
BtsIMutI CAGTG 4 cut(s) 45, 466, 776, 1008
Cac8I GCNNGC 3 cut(s) 151, 413, 557
CaiI CAGNNNCTG 3 cut(s) 156, 597, 920
Cfr13I GGNCC 1 cut(s) 588
Csp6I GTAC 1 cut(s) 973
CviAII CATG 2 cut(s) 349, 1008
CviQI GTAC 1 cut(s) 973
DdeI CTNAG 2 cut(s) 632, 888
DpnI GATC 3 cut(s) 342, 708, 876
DpnII GATC 3 cut(s) 340, 706, 874
Eam1104I CTCTTC 1 cut(s) 29
EarI CTCTTC 1 cut(s) 29
Ecl136II GAGCTC 1 cut(s) 271
Eco130I CCWWGG 1 cut(s) 576
Eco147I AGGCCT 1 cut(s) 391
Eco24I GRGCYC 1 cut(s) 273
Eco47I GGWCC 1 cut(s) 588
Eco53kI GAGCTC 1 cut(s) 271
Eco57I CTGAAG 1 cut(s) 752
Eco88I CYCGRG 2 cut(s) 266, 566
Eco91I GGTNACC 1 cut(s) 751
EcoICRI GAGCTC 1 cut(s) 271
EcoO65I GGTNACC 1 cut(s) 751
EcoT14I CCWWGG 1 cut(s) 576
EcoT38I GRGCYC 1 cut(s) 273
ErhI CCWWGG 1 cut(s) 576
FaeI CATG 2 cut(s) 352, 1011
FaiI YATR 9 cut(s) 52, 83, 308, 350, 663, 841, 879, 894, 1009
FalI AAGNNNNNCTT 2 cut(s) 479, 511
FaqI GGGAC 2 cut(s) 698, 931
FatI CATG 2 cut(s) 348, 1007
FauI CCCGC 1 cut(s) 788
FbaI TGATCA 1 cut(s) 706
Fnu4HI GCNGC 4 cut(s) 172, 214, 217, 220
FokI GGATG 3 cut(s) 105, 769, 811
FriOI GRGCYC 1 cut(s) 273
Fsp4HI GCNGC 4 cut(s) 172, 214, 217, 220
FspBI CTAG 1 cut(s) 666
GluI GCNGC 4 cut(s) 172, 214, 217, 220
GsuI CTGGAG 2 cut(s) 526, 948
HaeIII GGCC 1 cut(s) 391
HapII CCGG 3 cut(s) 252, 749, 847
Hin1II CATG 2 cut(s) 352, 1011
HinfI GANTC 4 cut(s) 524, 626, 727, 807
HpaII CCGG 3 cut(s) 252, 749, 847
HphI GGTGA 5 cut(s) 106, 121, 328, 380, 763
Hpy166II GTNNAC 1 cut(s) 464
Hpy188I TCNGA 4 cut(s) 275, 319, 633, 953
Hpy188III TCNNGA 3 cut(s) 285, 512, 776
Hpy8I GTNNAC 1 cut(s) 464
HpyAV CCTTC 5 cut(s) 75, 110, 291, 776, 958
HpyCH4III ACNGT 2 cut(s) 907, 922
HpyCH4IV ACGT 2 cut(s) 471, 855
HpyCH4V TGCA 6 cut(s) 50, 159, 459, 555, 656, 914
HpyF10VI GCNNNNNNNGC 2 cut(s) 146, 219
HpyF3I CTNAG 2 cut(s) 632, 888
HpySE526I ACGT 2 cut(s) 471, 855
Hsp92II CATG 2 cut(s) 352, 1011
Ksp22I TGATCA 1 cut(s) 706
Kzo9I GATC 3 cut(s) 340, 706, 874
LmnI GCTCC 4 cut(s) 254, 276, 545, 944
Lsp1109I GCAGC 2 cut(s) 200, 231
MaeI CTAG 1 cut(s) 666
MaeII ACGT 2 cut(s) 471, 855
MaeIII GTNAC 9 cut(s) 334, 368, 521, 533, 751, 842, 856, 922, 1003
MalI GATC 3 cut(s) 342, 708, 876
MboI GATC 3 cut(s) 340, 706, 874
MboII GAAGA 5 cut(s) 16, 300, 442, 487, 991
MhlI GDGCHC 1 cut(s) 273
MluCI AATT 4 cut(s) 355, 826, 909, 966
MlyI GAGTC 2 cut(s) 518, 635
MroXI GAANNNNTTC 1 cut(s) 280
MseI TTAA 1 cut(s) 300
MspI CCGG 3 cut(s) 252, 749, 847
MspR9I CCNGG 1 cut(s) 848
MwoI GCNNNNNNNGC 2 cut(s) 146, 219
NciI CCSGG 1 cut(s) 848
NdeII GATC 3 cut(s) 340, 706, 874
NlaIII CATG 2 cut(s) 352, 1011
NlaIV GGNNCC 1 cut(s) 946
NmuCI GTSAC 8 cut(s) 334, 368, 521, 533, 751, 842, 856, 1003
NspI RCATGY 1 cut(s) 1011
PaeR7I CTCGAG 1 cut(s) 266
PceI AGGCCT 1 cut(s) 391
PciI ACATGT 1 cut(s) 1007
PdmI GAANNNNTTC 1 cut(s) 280
PfeI GAWTC 2 cut(s) 727, 807
PkrI GCNGC 4 cut(s) 173, 215, 218, 221
PleI GAGTC 2 cut(s) 518, 634
PpsI GAGTC 2 cut(s) 518, 634
PscI ACATGT 1 cut(s) 1007
Psp124BI GAGCTC 1 cut(s) 273
PspEI GGTNACC 1 cut(s) 751
PspN4I GGNNCC 1 cut(s) 946
PspPI GGNCC 1 cut(s) 588
PspXI VCTCGAGB 1 cut(s) 266
PstI CTGCAG 2 cut(s) 161, 461
PstNI CAGNNNCTG 3 cut(s) 156, 597, 920
RsaI GTAC 1 cut(s) 974
RsaNI GTAC 1 cut(s) 973
SacI GAGCTC 1 cut(s) 273
SaqAI TTAA 1 cut(s) 300
SatI GCNGC 4 cut(s) 172, 214, 217, 220
Sau3AI GATC 3 cut(s) 340, 706, 874
Sau96I GGNCC 1 cut(s) 588
SchI GAGTC 2 cut(s) 518, 635
ScrFI CCNGG 1 cut(s) 848
SduI GDGCHC 1 cut(s) 273
SfcI CTRYAG 2 cut(s) 157, 457
Sfr274I CTCGAG 1 cut(s) 266
SinI GGWCC 1 cut(s) 588
SlaI CTCGAG 1 cut(s) 266
SmlI CTYRAG 2 cut(s) 144, 266
SmoI CTYRAG 2 cut(s) 144, 266
SpeI ACTAGT 1 cut(s) 665
Sse9I AATT 4 cut(s) 355, 826, 909, 966
SseBI AGGCCT 1 cut(s) 391
SsiI CCGC 3 cut(s) 171, 216, 795
SspI AATATT 1 cut(s) 650
SspMI CTAG 1 cut(s) 666
SstI GAGCTC 1 cut(s) 273
StuI AGGCCT 1 cut(s) 391
StyD4I CCNGG 1 cut(s) 846
StyI CCWWGG 1 cut(s) 576
TaaI ACNGT 2 cut(s) 907, 922
TaiI ACGT 2 cut(s) 474, 858
TaqI TCGA 5 cut(s) 260, 267, 402, 735, 810
TasI AATT 4 cut(s) 355, 826, 909, 966
TauI GCSGC 2 cut(s) 174, 219
TfiI GAWTC 2 cut(s) 727, 807
Tru1I TTAA 1 cut(s) 300
Tru9I TTAA 1 cut(s) 300
TscAI CASTG 4 cut(s) 52, 466, 776, 1008
TseFI GTSAC 8 cut(s) 334, 368, 521, 533, 751, 842, 856, 1003
TseI GCWGC 2 cut(s) 213, 219
Tsp45I GTSAC 8 cut(s) 334, 368, 521, 533, 751, 842, 856, 1003
TspDTI ATGAA 1 cut(s) 337
TspRI CASTG 4 cut(s) 52, 466, 776, 1008
VpaK11BI GGWCC 1 cut(s) 588
XapI RAATTY 2 cut(s) 826, 966
XceI RCATGY 1 cut(s) 1011
XhoI CTCGAG 1 cut(s) 266
XmnI GAANNNNTTC 1 cut(s) 280
XspI CTAG 1 cut(s) 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.