Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0004470

Physical Location & Seq

Genomic Coordinates Reverse (-)

2935862 .. 2943444

Gene Structure 7583 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G061600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3714 bp

ATGCCTCTGGTGAGGTTTCAGGTGAGGAACGAGTTCAGCCTGGGCCAGCCTCAGCTGTACAAAGAGGTGAACAGAGAAGATCCCAAAGCTGTGCTCGATGGGGTGGCCGTTGCTGGCCTCGTTGGGATCTTGCGCCAATTGGGCGATCTTGCTGAGTTTGCAGCGGAAGTTTTTCATGGCTTGCAAGAGCAAGTGATGACTACAGCTTCTAGAAGCCAAAAACTGATGGTTCGTGTGCAACACATTGAAGCTGCACTTCCTCCCCTTGAGAAGGCTGTACTTGCTCAAACAAGCCACATACATTTTGCTTACACCTCTGGTTTAGAGTGGCATCCTCGTATTCGAAATGAGAAAAATCATTTCATCTACAATGACTTGCCGCGTTTTATTATGGATTCATATGAAGAATGTCAGGATCCCCCACGTTTGCACTTGCTTGACAAGTTTGATACCGGCGGCCCAGGATCTTGTTTAAAGAGATATTCAGATCCAACCTTTTTCAAAAAAGCATCAGCTAACCCTGATGAAGCAAATGTTGAACAAGTCCGAAGATCTAGGAAGGGTCAAAGAAGCAAGAAGAAAAGAGGATCACAACGAAATGGAGATGTATTACGTGGTGCATCAGTATCAAATCGCAGCAGCAGAATGCAATATATTCCTCCTATTGCAAATGGGCGAAGCTCGTCTTCTCCAACTGCCTCCACAGCCGACATGGCATTAAAATCTGACCTGGGGGACAATTCCATTTCTTTTGATTCAAAAACTGAGTCAGAATATATTGAGTATGCTGCCCATCCAAGTTCCTCCCTACTAGCTGAAGAACAAGAATCCAAGGAATCGCCTTCTTCTAAATCGGTGCAAAATGATGCTCTTAATTCTGTTTTGCCTGATGATCAAACTGGATTTGTAGATAACTCTCCTGGAAGTTCATTACAGGACCAAGTTACCTCTGGTTCATCTGGTGTTAACTGGGATGAGAAGGTAGAAATAGTGGATCCTAAAGGTCAACAGAATTGTATAGATGAAACTACAGAGATGCTCCTGACAGAGGATGACTTGGATGCAAATGAAGGGGGAGCTGGTAGCTTTAGAATTGTTGAGCAAATGGATGTCCTCTTTGATGATGAAAACATTCTGGAACCAAGCAGGAACCAGATTGATGAAATTGAAAGTGAACCAGACAATTTCATGGATGCACTTAACACCATTGAATCAGAATCTGAAAACGATCTTGATTGTCAAACCAAACGGGAAGTGGAGCGTTTTGCTTCTGTTGTCAACAATAAAGGACCAGATGGAGTGCATGAGATTACCATGGATTGTTCGGATCATCAAACTCCAACTTTAGAATCTCATACTGCAACATCTTACGTTTCCTCAGAAGAAGAAACGCCGACAGATCTATCAAACTCAACCTCACCAGAGTGTCCCGCCCATAAACATATGCCTCAAATAGCTACAGAACTGTCTAATTCAGACCACATTGTAGAAACAAATAGGACTGACATTTTTGATTGTTCAAGGTTCGAATCTGTTAGTGGTGATTCCACATCCTCTGGCTCTGGAACTACTAATGCGCAGGATAAGACCATAAGCAGTTTGTGTGAGGCTCCACAATCTCCTGCTGACGTTTCAAGGAATAATTCAACATCCTTTGGCTCTGGAACTACAAATGAGCAGGATAATCTCATAAGCAGTTTATGTGAGGCTCAAGAATCTCCTGCTGACATTTCCAGGAATAATACAACATCCTTTGGCTCTGGAACTACTAATGAGCAGGATAAGATCATAAGCAGTTTATGTGAGGCTCAAGAATCTCCTGCTGACATTTGCAGGAATAATACAACATCCTGTGGCTCTGGAATTTCTAATGCGAAGGATAAGATCATAAGCGGTTTATGTGAGTCTCAAGAATCTCTTGGTGACATCTCCAGGAATAATTCAACATCCTGTGGTTCTGGAACTGCTAATGCAAAGGATAAGATCATAAGCGGTTTATGCGAGTCTCAAGAATCTCTTGCTGACATTTCCAGGACTAATTCAATAAATTTCTGGACTAATGGAGGCCTGTTAGGACTTCAGCCATCAAAGCCTCCTGATTTTACCATGTCCAGTCCTATAACTCAAGATTCTGCTTACAGAAGCACCGAGACAGTTGGTGTCTCAAATCATGCTTACACGCTTATAGCTGATGAGCATGAAGCTGAGAATGCTGGCTGCAAGGAAATGAGCTCTGATTATCAAGAAGATGGTATCTCTCCCAAGGAAATATCCAAGGGATTTTCATCCACTGAATTGTATCCAAAGCTTGGAAATATTGGTGACTCTCCTAAGAGTAATGTATTTAGCCATTGCATGGAGGATGGTTTGAAAAAAACCAATACGATGGAACCTGGAACTCTGTTGCCAGTTGCTCCATGTCGTAAATCCACTTCCAATGAAGCGAATCAGGAGAATGATGAAAACTCTTCTCTGGTTTTTGGGCTTGGCCGTAGGTTACTTGTGAATGGTTTTGGTAGAAAAGTTCCACATTCGCACGATGAAAAATCTGAGCCTGCTAGTTATTCAAATGCTGGTGTTTTGGACCAGAGAAATGAGCACCACAGAGTAGAGCACCAAGCATTTCCCGACACATCCTTCAAAGAGAATTTTGAGCATGGATTTGCTGTTGAATCACCTCCTTCTTCACCACCACTTGAACATATGAAAATATCTTTCCATCCCATGAATGGCATTGAAACTTCCATACTCAAATTGAAATTATCTGATGGGAGTCAAAGCCATGGAAGTGTAAAAGAAATGTTTCAGTCATTTCAGTTGGTCCCAGAGCCTTCTATTCCTCTGCATGAATTTGGTTCTGATTCTGATGATGACACATTCTGTAGATCATCTCCATATATATCAGATGATTGTCTAAGCCATCTCTCTGAGTCGAATTCTGAACAATGGGAATCTAGTGAAAATCTAGAATGCAAGAACCATGACCTATACGATGCTTTGTGTGGAATCGCATCAGCTGAACGTATATCCACCTCTCTGGAAGTAGGGGGAATATCCCACAATGCCACTTATGGAGATGGTGGAATTCAAAGTGTGCACACTGATAATGGTCTGGAACATTCTCTCTCCGATCCTTTACTTGATCTTCCAAGTTTAGATGCTTTGGAACCCGTACTTCAGCAAGAAGCAAAGGATGATTCAGTTCCTAAGGATCTTCATGGTTTGAAATGTTCGGGGGATTCTACACCAGGACCACCACCTCTCCCTCCAGTGGAATGGCGTGTTTCAAAACCTACCTTAAATGTAACAGACGAAAAACAAGATGTATCTGAAGGTTTTAAACATGTATTCGACACACAGATTTTGGGGCCTCTCACCCTCCAGCAACCTAAGCCAGCCCCAGCACAGCAACAACAAATAAATGAGGAGTCCATTTCTATTAAACCGAAATGCAAGGAGGACCAGCACGTGAATGGACAGAAAGAAGCTGATCAGGCTCTAAATGGCAAAGGGATAGACGAAAAGGAAGATTTTCTACAACAAATCAGAGCAAAGTCATTCAACCTGAGACGCACAGTACCAGCAAAGCCAACCATCACACCGGTATCTGCTACCAACGTCAAAGTAACTGCAATTTTGGAGAAAGCCAACGCCATTCGCCAGGCTGTTGGGAGTGATGAAGGGGAAGACGACGATACATGGAGTGATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0003785 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0016020 GO:0016043 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0032991 GO:0033043 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051125 GO:0051127 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1238

Amino Acids

134.87

Weight (kDa)

4.68

Isoelectric Point (pI)

50.9

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004470)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29170 AT1G29170 AT1G29170 AT2G34150 AT2G34150 AT2G34150 AT2G34150 AT2G34150
fragaria_vesca	FvH4_3g07780 FvH4_3g07780 FvH4_3g07780 FvH4_3g07780
malus_domestica	MD00G1207000.v1.1 MD05G1300900.v1.1 MD05G1301000.v1.1 MD10G1279900.v1.1
prunus_persica	Prupe.4G061600_v2.0.a1 Prupe.4G061600_v2.0.a1
pyrus_communis	pycom05g27880 pycom10g23370
rosa_chinensis	RchiOBHm_Chr5g0010801
rosa_laevigata	RLG00000031781
rosa_multiflora	Rmu_sc0000109.1_g000018
rosa_roxburghii	Rroxscaffold_1G00065580
rosa_rugosa	Rorug04G0452600 Rorug04G0452700
rosa_samantha	Rh5AG084800 Rh5BG079600 Rh5CG092300 Rh5DG079700
rosa_wichuraiana	Rw0G000540 Rw0G022250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1578
AccB7I	CCANNNNNTGG	2 cut(s)	2309, 2356
AccII	CGCG	1 cut(s)	382
AciI	CCGC	6 cut(s)	164, 380, 456, 1431, 1893, 1992
AcoI	YGGCCR	2 cut(s)	105, 2488
AcsI	RAATTY	6 cut(s)	1863, 2047, 2647, 2849, 2935, 3084
AcuI	CTGAAG	4 cut(s)	837, 2063, 3161, 3351
AcvI	CACGTG	1 cut(s)	3469
AfaI	GTAC	4 cut(s)	59, 279, 3174, 3579
AfiI	CCNNNNNNNGG	6 cut(s)	271, 1048, 2309, 2356, 2729, 3271
AflIII	ACRYGT	1 cut(s)	3343
AgeI	ACCGGT	1 cut(s)	3601
AleI	CACNNNNGTG	1 cut(s)	1423
Alw21I	GWGCWC	5 cut(s)	96, 2234, 2601, 2616, 3099
Alw26I	GTCTC	5 cut(s)	1911, 2010, 2144, 2167, 3562
Alw44I	GTGCAC	1 cut(s)	3095
AlwNI	CAGNNNCTG	1 cut(s)	1220
AoxI	GGCC	7 cut(s)	43, 105, 115, 457, 2065, 2488, 3368
ApaLI	GTGCAC	1 cut(s)	3095
ApeKI	GCWGC	6 cut(s)	161, 251, 636, 639, 788, 2217
ApoI	RAATTY	6 cut(s)	1863, 2047, 2647, 2849, 2935, 3084
ArsI	GACNNNNNNTTYG	2 cut(s)	752, 784
AsiGI	ACCGGT	1 cut(s)	3601
Asp700I	GAANNNNTTC	5 cut(s)	32, 171, 1131, 2802, 3531
AspLEI	GCGC	2 cut(s)	135, 1579
AspS9I	GGNCC	9 cut(s)	43, 458, 937, 1289, 2584, 2821, 3251, 3368, 3460
AsuII	TTCGAA	2 cut(s)	343, 1527
AvaII	GGWCC	6 cut(s)	937, 1289, 2584, 2821, 3251, 3460
AxyI	CCTNAGG	1 cut(s)	3207
BaeGI	GKGCMC	1 cut(s)	3099
BaeI	ACNNNNGTAYC	2 cut(s)	3588, 3621
BamHI	GGATCC	2 cut(s)	415, 994
BanII	GRGCYC	1 cut(s)	2234
BarI	GAAGNNNNNNTAC	4 cut(s)	2416, 2448, 3519, 3551
BbrPI	CACGTG	1 cut(s)	3469
BbsI	GAAGAC	2 cut(s)	678, 3693
Bbv12I	GWGCWC	5 cut(s)	96, 2234, 2601, 2616, 3099
BbvCI	CCTCAGC	1 cut(s)	51
BbvI	GCAGC	6 cut(s)	173, 238, 648, 651, 775, 2204
BceAI	ACGGC	2 cut(s)	92, 2475
BciVI	GTATCC	1 cut(s)	2310
BclI	TGATCA	2 cut(s)	892, 3490
BcoDI	GTCTC	5 cut(s)	1911, 2010, 2144, 2167, 3562
BfaI	CTAG	6 cut(s)	210, 555, 812, 2559, 2955, 2966
BfmI	CTRYAG	4 cut(s)	201, 1029, 1458, 2881
BfuI	GTATCC	1 cut(s)	2310
BglI	GCCNNNNNGGC	2 cut(s)	141, 713
BglII	AGATCT	2 cut(s)	551, 1399
BisI	GCNGC	8 cut(s)	162, 252, 380, 457, 637, 640, 789, 2218
BlsI	GCNGC	8 cut(s)	163, 253, 381, 458, 638, 641, 790, 2219
Bme18I	GGWCC	6 cut(s)	937, 1289, 2584, 2821, 3251, 3460
BmgT120I	GGNCC	9 cut(s)	43, 458, 937, 1289, 2584, 2821, 3251, 3368, 3460
BmiI	GGNNCC	9 cut(s)	417, 996, 1140, 1151, 1611, 2391, 2823, 3168, 3369
BmrI	ACTGGG	1 cut(s)	979
BmuI	ACTGGG	1 cut(s)	979
BpiI	GAAGAC	2 cut(s)	678, 3693
BpmI	CTGGAG	3 cut(s)	1915, 3252, 3365
Bpu10I	CCTNAGC	2 cut(s)	51, 3390
Bpu14I	TTCGAA	2 cut(s)	343, 1527
BpuEI	CTTGAG	6 cut(s)	287, 1695, 1794, 1893, 1992, 2109
BsaAI	YACGTR	2 cut(s)	614, 3469
BsaBI	GATNNNNATC	1 cut(s)	2284
BsaJI	CCNNGG	8 cut(s)	40, 460, 730, 831, 1314, 2262, 2274, 2782
BsaWI	WCCGGW	1 cut(s)	3601
BsaXI	ACNNNNNCTCC	2 cut(s)	3246, 3276
Bsc4I	CCNNNNNNNGG	6 cut(s)	271, 1048, 2309, 2356, 2729, 3271
Bse118I	RCCGGY	2 cut(s)	452, 3601
Bse1I	ACTGG	5 cut(s)	904, 974, 2112, 2408, 3269
Bse21I	CCTNAGG	1 cut(s)	3207
Bse3DI	GCAATG	1 cut(s)	2350
Bse8I	GATNNNNATC	1 cut(s)	2284
BseDI	CCNNGG	8 cut(s)	40, 460, 730, 831, 1314, 2262, 2274, 2782
BseJI	GATNNNNATC	1 cut(s)	2284
BseLI	CCNNNNNNNGG	6 cut(s)	271, 1048, 2309, 2356, 2729, 3271
BseMI	GCAATG	1 cut(s)	2350
BseMII	CTCAG	8 cut(s)	65, 144, 756, 1392, 2196, 2541, 2919, 3557
BseNI	ACTGG	5 cut(s)	904, 974, 2112, 2408, 3269
BseRI	GAGGAG	1 cut(s)	3440
BseSI	GKGCMC	1 cut(s)	3099
BseXI	GCAGC	6 cut(s)	173, 238, 648, 651, 775, 2204
BseYI	CCCAGC	1 cut(s)	3400
BsgI	GTGCAG	1 cut(s)	237
Bsh1236I	CGCG	1 cut(s)	382
BshFI	GGCC	7 cut(s)	45, 107, 117, 459, 2067, 2490, 3370
BshTI	ACCGGT	1 cut(s)	3601
BsiHKAI	GWGCWC	5 cut(s)	96, 2234, 2601, 2616, 3099
BsiSI	CCGG	2 cut(s)	453, 3602
BslFI	GGGAC	3 cut(s)	749, 1413, 2807
BslI	CCNNNNNNNGG	6 cut(s)	271, 1048, 2309, 2356, 2729, 3271
BsmAI	GTCTC	5 cut(s)	1911, 2010, 2144, 2167, 3562
BsmBI	CGTCTC	1 cut(s)	3562
BsmFI	GGGAC	3 cut(s)	749, 1413, 2807
BsmI	GAATGC	3 cut(s)	651, 2215, 2975
BsnI	GGCC	7 cut(s)	45, 107, 117, 459, 2067, 2490, 3370
Bsp119I	TTCGAA	2 cut(s)	343, 1527
Bsp1286I	GDGCHC	5 cut(s)	96, 2234, 2601, 2616, 3099
Bsp1407I	TGTACA	1 cut(s)	57
Bsp19I	CCATGG	2 cut(s)	1314, 2782
BspACI	CCGC	6 cut(s)	164, 380, 456, 1431, 1893, 1992
BspANI	GGCC	7 cut(s)	45, 107, 117, 459, 2067, 2490, 3370
BspCNI	CTCAG	8 cut(s)	64, 145, 757, 1391, 2197, 2542, 2920, 3558
BspFNI	CGCG	1 cut(s)	382
BspLI	GGNNCC	9 cut(s)	417, 996, 1140, 1151, 1611, 2391, 2823, 3168, 3369
BspT104I	TTCGAA	2 cut(s)	343, 1527
BsrDI	GCAATG	1 cut(s)	2350
BsrFI	RCCGGY	2 cut(s)	452, 3601
BsrGI	TGTACA	1 cut(s)	57
BsrI	ACTGG	5 cut(s)	904, 974, 2112, 2408, 3269
BssAI	RCCGGY	2 cut(s)	452, 3601
BssECI	CCNNGG	8 cut(s)	40, 460, 730, 831, 1314, 2262, 2274, 2782
BssT1I	CCWWGG	5 cut(s)	831, 1314, 2262, 2274, 2782
Bst4CI	ACNGT	3 cut(s)	1467, 2155, 3577
Bst6I	CTCTTC	1 cut(s)	2473
BstAUI	TGTACA	1 cut(s)	57
BstBAI	YACGTR	2 cut(s)	614, 3469
BstBI	TTCGAA	2 cut(s)	343, 1527
BstC8I	GCNNGC	6 cut(s)	47, 115, 182, 2215, 2556, 3396
BstDSI	CCRYGG	2 cut(s)	1314, 2782
BstENI	CCTNNNNNAGG	2 cut(s)	269, 1046
BstFNI	CGCG	1 cut(s)	382
BstHHI	GCGC	2 cut(s)	135, 1579
BstMAI	GTCTC	5 cut(s)	1911, 2010, 2144, 2167, 3562
BstNSI	RCATGY	1 cut(s)	3347
BstSFI	CTRYAG	4 cut(s)	201, 1029, 1458, 2881
BstSLI	GKGCMC	1 cut(s)	3099
BstUI	CGCG	1 cut(s)	382
BstV1I	GCAGC	6 cut(s)	173, 238, 648, 651, 775, 2204
BstV2I	GAAGAC	2 cut(s)	678, 3693
BstX2I	RGATCY	9 cut(s)	79, 126, 415, 464, 487, 551, 994, 1399, 3211
BstXI	CCANNNNNNTGG	4 cut(s)	2386, 3037, 3276, 3668
BstYI	RGATCY	9 cut(s)	79, 126, 415, 464, 487, 551, 994, 1399, 3211
Bsu36I	CCTNAGG	1 cut(s)	3207
BsuI	GTATCC	1 cut(s)	2310
BsuRI	GGCC	7 cut(s)	45, 107, 117, 459, 2067, 2490, 3370
BtgI	CCRYGG	2 cut(s)	1314, 2782
BtsIMutI	CAGTG	3 cut(s)	2289, 3099, 3276
Cac8I	GCNNGC	6 cut(s)	47, 115, 182, 2215, 2556, 3396
CaiI	CAGNNNCTG	1 cut(s)	1220
CfoI	GCGC	2 cut(s)	135, 1579
Cfr10I	RCCGGY	2 cut(s)	452, 3601
Cfr13I	GGNCC	9 cut(s)	43, 458, 937, 1289, 2584, 2821, 3251, 3368, 3460
CseI	GACGC	1 cut(s)	3579
Csp6I	GTAC	4 cut(s)	58, 278, 3173, 3578
CspAI	ACCGGT	1 cut(s)	3601
CviQI	GTAC	4 cut(s)	58, 278, 3173, 3578
DraI	TTTAAA	2 cut(s)	474, 3340
EaeI	YGGCCR	2 cut(s)	105, 2488
Eam1104I	CTCTTC	1 cut(s)	2473
EarI	CTCTTC	1 cut(s)	2473
Ecl136II	GAGCTC	1 cut(s)	2232
Eco130I	CCWWGG	5 cut(s)	831, 1314, 2262, 2274, 2782
Eco147I	AGGCCT	1 cut(s)	2067
Eco24I	GRGCYC	1 cut(s)	2234
Eco47I	GGWCC	6 cut(s)	937, 1289, 2584, 2821, 3251, 3460
Eco53kI	GAGCTC	1 cut(s)	2232
Eco57I	CTGAAG	4 cut(s)	837, 2063, 3161, 3351
Eco72I	CACGTG	1 cut(s)	3469
Eco81I	CCTNAGG	1 cut(s)	3207
EcoICRI	GAGCTC	1 cut(s)	2232
EcoNI	CCTNNNNNAGG	2 cut(s)	269, 1046
EcoO109I	RGGNCCY	1 cut(s)	3368
EcoRI	GAATTC	2 cut(s)	2935, 3084
EcoT14I	CCWWGG	5 cut(s)	831, 1314, 2262, 2274, 2782
EcoT38I	GRGCYC	1 cut(s)	2234
ErhI	CCWWGG	5 cut(s)	831, 1314, 2262, 2274, 2782
Esp3I	CGTCTC	1 cut(s)	3562
FalI	AAGNNNNNCTT	8 cut(s)	240, 272, 670, 702, 1902, 1934, 2001, 2033
FaqI	GGGAC	3 cut(s)	749, 1413, 2807
FauI	CCCGC	1 cut(s)	1438
FauNDI	CATATG	3 cut(s)	400, 1443, 2703
FbaI	TGATCA	2 cut(s)	892, 3490
Fnu4HI	GCNGC	8 cut(s)	162, 252, 380, 457, 637, 640, 789, 2218
FriOI	GRGCYC	1 cut(s)	2234
Fsp4HI	GCNGC	8 cut(s)	162, 252, 380, 457, 637, 640, 789, 2218
FspBI	CTAG	6 cut(s)	210, 555, 812, 2559, 2955, 2966
FspI	TGCGCA	1 cut(s)	1578
GlaI	GCGC	2 cut(s)	134, 1578
GluI	GCNGC	8 cut(s)	162, 252, 380, 457, 637, 640, 789, 2218
GsaI	CCCAGC	1 cut(s)	3404
GsuI	CTGGAG	3 cut(s)	1915, 3252, 3365
HaeIII	GGCC	7 cut(s)	45, 107, 117, 459, 2067, 2490, 3370
HapII	CCGG	2 cut(s)	453, 3602
HgaI	GACGC	1 cut(s)	3579
HhaI	GCGC	2 cut(s)	135, 1579
Hin6I	GCGC	2 cut(s)	133, 1577
HinP1I	GCGC	2 cut(s)	133, 1577
HincII	GTYRAC	3 cut(s)	967, 1007, 1279
HindII	GTYRAC	3 cut(s)	967, 1007, 1279
HindIII	AAGCTT	1 cut(s)	2306
HpaI	GTTAAC	1 cut(s)	967
HpaII	CCGG	2 cut(s)	453, 3602
Hpy166II	GTNNAC	6 cut(s)	70, 967, 1007, 1175, 1279, 3097
Hpy8I	GTNNAC	6 cut(s)	70, 967, 1007, 1175, 1279, 3097
Hpy99I	CGWCG	1 cut(s)	3695
HpyCH4III	ACNGT	3 cut(s)	1467, 2155, 3577
HpyCH4IV	ACGT	7 cut(s)	424, 613, 1371, 1629, 3022, 3468, 3618
HpySE526I	ACGT	7 cut(s)	424, 613, 1371, 1629, 3022, 3468, 3618
HspAI	GCGC	2 cut(s)	133, 1577
Ksp22I	TGATCA	2 cut(s)	892, 3490
KspAI	GTTAAC	1 cut(s)	967
LmnI	GCTCC	5 cut(s)	1044, 1076, 1258, 1615, 2419
Lsp1109I	GCAGC	6 cut(s)	173, 238, 648, 651, 775, 2204
MaeI	CTAG	6 cut(s)	210, 555, 812, 2559, 2955, 2966
MaeII	ACGT	7 cut(s)	424, 613, 1371, 1629, 3022, 3468, 3618
MaeIII	GTNAC	6 cut(s)	943, 1922, 2321, 2496, 3304, 3625
MfeI	CAATTG	1 cut(s)	137
MflI	RGATCY	9 cut(s)	79, 126, 415, 464, 487, 551, 994, 1399, 3211
MhlI	GDGCHC	5 cut(s)	96, 2234, 2601, 2616, 3099
MlyI	GAGTC	7 cut(s)	776, 1913, 2012, 2318, 2782, 2939, 3437
MmeI	TCCRAC	3 cut(s)	515, 716, 1364
MroXI	GAANNNNTTC	5 cut(s)	32, 171, 1131, 2802, 3531
MseI	TTAA	8 cut(s)	473, 719, 873, 966, 1200, 3299, 3339, 3441
MslI	CAYNNNNRTG	3 cut(s)	1423, 2787, 3471
MspA1I	CMGCKG	3 cut(s)	55, 164, 3017
MspI	CCGG	2 cut(s)	453, 3602
MunI	CAATTG	1 cut(s)	137
Mva1269I	GAATGC	3 cut(s)	651, 2215, 2975
MvnI	CGCG	1 cut(s)	382
NcoI	CCATGG	2 cut(s)	1314, 2782
NdeI	CATATG	3 cut(s)	400, 1443, 2703
NlaIV	GGNNCC	9 cut(s)	417, 996, 1140, 1151, 1611, 2391, 2823, 3168, 3369
NmuCI	GTSAC	2 cut(s)	1922, 2321
NsbI	TGCGCA	1 cut(s)	1578
NspI	RCATGY	1 cut(s)	3347
NspV	TTCGAA	2 cut(s)	343, 1527
OliI	CACNNNNGTG	1 cut(s)	1423
PceI	AGGCCT	1 cut(s)	2067
PciI	ACATGT	1 cut(s)	3343
PctI	GAATGC	3 cut(s)	651, 2215, 2975
PdmI	GAANNNNTTC	5 cut(s)	32, 171, 1131, 2802, 3531
PflMI	CCANNNNNTGG	2 cut(s)	2309, 2356
PfoI	TCCNGGA	4 cut(s)	919, 1733, 1931, 2030
PinAI	ACCGGT	1 cut(s)	3601
PkrI	GCNGC	8 cut(s)	163, 253, 381, 458, 638, 641, 790, 2219
PleI	GAGTC	7 cut(s)	775, 1912, 2011, 2318, 2781, 2938, 3436
PmaCI	CACGTG	1 cut(s)	3469
PmlI	CACGTG	1 cut(s)	3469
PpsI	GAGTC	7 cut(s)	775, 1912, 2011, 2318, 2781, 2938, 3436
Ppu21I	YACGTR	2 cut(s)	614, 3469
PscI	ACATGT	1 cut(s)	3343
Psp124BI	GAGCTC	1 cut(s)	2234
PspCI	CACGTG	1 cut(s)	3469
PspFI	CCCAGC	1 cut(s)	3400
PspN4I	GGNNCC	9 cut(s)	417, 996, 1140, 1151, 1611, 2391, 2823, 3168, 3369
PspPI	GGNCC	9 cut(s)	43, 458, 937, 1289, 2584, 2821, 3251, 3368, 3460
PstNI	CAGNNNCTG	1 cut(s)	1220
PsuI	RGATCY	9 cut(s)	79, 126, 415, 464, 487, 551, 994, 1399, 3211
PvuII	CAGCTG	2 cut(s)	55, 3017
RsaI	GTAC	4 cut(s)	59, 279, 3174, 3579
RsaNI	GTAC	4 cut(s)	58, 278, 3173, 3578
RseI	CAYNNNNRTG	3 cut(s)	1423, 2787, 3471
SacI	GAGCTC	1 cut(s)	2234
SaqAI	TTAA	8 cut(s)	473, 719, 873, 966, 1200, 3299, 3339, 3441
SatI	GCNGC	8 cut(s)	162, 252, 380, 457, 637, 640, 789, 2218
Sau96I	GGNCC	9 cut(s)	43, 458, 937, 1289, 2584, 2821, 3251, 3368, 3460
SchI	GAGTC	7 cut(s)	776, 1913, 2012, 2318, 2782, 2939, 3437
SduI	GDGCHC	5 cut(s)	96, 2234, 2601, 2616, 3099
SfcI	CTRYAG	4 cut(s)	201, 1029, 1458, 2881
SfuI	TTCGAA	2 cut(s)	343, 1527
SinI	GGWCC	6 cut(s)	937, 1289, 2584, 2821, 3251, 3460
SmiMI	CAYNNNNRTG	3 cut(s)	1423, 2787, 3471
SmlI	CTYRAG	6 cut(s)	266, 1710, 1809, 1908, 2007, 2124
SmoI	CTYRAG	6 cut(s)	266, 1710, 1809, 1908, 2007, 2124
SseBI	AGGCCT	1 cut(s)	2067
SsiI	CCGC	6 cut(s)	164, 380, 456, 1431, 1893, 1992
SspI	AATATT	1 cut(s)	2317
SspMI	CTAG	6 cut(s)	210, 555, 812, 2559, 2955, 2966
SstI	GAGCTC	1 cut(s)	2234
StuI	AGGCCT	1 cut(s)	2067
StyI	CCWWGG	5 cut(s)	831, 1314, 2262, 2274, 2782
TaaI	ACNGT	3 cut(s)	1467, 2155, 3577
TaiI	ACGT	7 cut(s)	427, 616, 1374, 1632, 3025, 3471, 3621
TaqI	TCGA	5 cut(s)	96, 343, 1527, 2933, 3351
TatI	WGTACW	2 cut(s)	57, 277
TauI	GCSGC	2 cut(s)	382, 459
Tru1I	TTAA	8 cut(s)	473, 719, 873, 966, 1200, 3299, 3339, 3441
Tru9I	TTAA	8 cut(s)	473, 719, 873, 966, 1200, 3299, 3339, 3441
TscAI	CASTG	3 cut(s)	2296, 3106, 3276
TseFI	GTSAC	2 cut(s)	1922, 2321
TseI	GCWGC	6 cut(s)	161, 251, 636, 639, 788, 2217
Tsp45I	GTSAC	2 cut(s)	1922, 2321
TspRI	CASTG	3 cut(s)	2296, 3106, 3276
Van91I	CCANNNNNTGG	2 cut(s)	2309, 2356
VneI	GTGCAC	1 cut(s)	3095
VpaK11BI	GGWCC	6 cut(s)	937, 1289, 2584, 2821, 3251, 3460
XagI	CCTNNNNNAGG	2 cut(s)	269, 1046
XapI	RAATTY	6 cut(s)	1863, 2047, 2647, 2849, 2935, 3084
XbaI	TCTAGA	2 cut(s)	209, 2965
XceI	RCATGY	1 cut(s)	3347
XcmI	CCANNNNNNNNNTGG	5 cut(s)	709, 947, 1252, 2726, 3470
XmnI	GAANNNNTTC	5 cut(s)	32, 171, 1131, 2802, 3531
XspI	CTAG	6 cut(s)	210, 555, 812, 2559, 2955, 2966

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.