isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G29170 AT1G29170 AT1G29170 AT2G34150 AT2G34150 AT2G34150 AT2G34150 AT2G34150 |
| fragaria_vesca | FvH4_3g07780 FvH4_3g07780 FvH4_3g07780 FvH4_3g07780 |
| malus_domestica | MD00G1207000.v1.1 MD05G1300900.v1.1 MD05G1301000.v1.1 MD10G1279900.v1.1 |
| prunus_persica | Prupe.4G061600_v2.0.a1 Prupe.4G061600_v2.0.a1 |
| pyrus_communis | pycom05g27880 pycom10g23370 |
| rosa_chinensis | RchiOBHm_Chr5g0010801 |
| rosa_laevigata | RLG00000031781 |
| rosa_multiflora | Rmu_sc0000109.1_g000018 |
| rosa_roxburghii | Rroxscaffold_1G00065580 |
| rosa_rugosa | Rorug04G0452600 Rorug04G0452700 |
| rosa_samantha | Rh5AG084800 Rh5BG079600 Rh5CG092300 Rh5DG079700 |
| rosa_wichuraiana | Rw0G000540 Rw0G022250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 847 |
| Acc36I | ACCTGC | 2 cut(s) | 847, 3355 |
| AccB1I | GGYRCC | 1 cut(s) | 1499 |
| AccIII | TCCGGA | 2 cut(s) | 1571, 3142 |
| AciI | CCGC | 4 cut(s) | 5, 25, 3209, 3564 |
| AcoI | YGGCCR | 1 cut(s) | 3004 |
| AcsI | RAATTY | 5 cut(s) | 443, 1358, 2572, 3365, 3451 |
| AcuI | CTGAAG | 2 cut(s) | 3139, 3677 |
| AcyI | GRCGYC | 1 cut(s) | 102 |
| AfaI | GTAC | 9 cut(s) | 35, 59, 279, 3096, 3131, 3654, 3690, 4083, 4110 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 142, 271, 1691, 3245, 3442, 3559, 3560 |
| AflIII | ACRYGT | 1 cut(s) | 3315 |
| AgeI | ACCGGT | 1 cut(s) | 314 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2685 |
| Alw21I | GWGCWC | 3 cut(s) | 96, 2727, 3615 |
| Alw44I | GTGCAC | 1 cut(s) | 3611 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1229, 3347 |
| Ama87I | CYCGRG | 2 cut(s) | 266, 2988 |
| Aor13HI | TCCGGA | 2 cut(s) | 1571, 3142 |
| AoxI | GGCC | 5 cut(s) | 115, 457, 1336, 2590, 3004 |
| ApaLI | GTGCAC | 1 cut(s) | 3611 |
| ApeKI | GCWGC | 7 cut(s) | 46, 161, 251, 785, 3041, 3115, 4094 |
| ApoI | RAATTY | 5 cut(s) | 443, 1358, 2572, 3365, 3451 |
| AsiGI | ACCGGT | 1 cut(s) | 314 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3852 |
| AspLEI | GCGC | 1 cut(s) | 135 |
| AspS9I | GGNCC | 5 cut(s) | 458, 3100, 3683, 3767, 3964 |
| AsuC2I | CCSGG | 2 cut(s) | 2062, 2161 |
| AsuII | TTCGAA | 3 cut(s) | 343, 1389, 3846 |
| AvaI | CYCGRG | 2 cut(s) | 266, 2988 |
| AvaII | GGWCC | 4 cut(s) | 3100, 3683, 3767, 3964 |
| BaeGI | GKGCMC | 1 cut(s) | 3615 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4092, 4125 |
| BamHI | GGATCC | 2 cut(s) | 415, 997 |
| BanI | GGYRCC | 1 cut(s) | 1499 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 3645, 3677, 4023, 4055 |
| Bbv12I | GWGCWC | 3 cut(s) | 96, 2727, 3615 |
| BbvCI | CCTCAGC | 1 cut(s) | 51 |
| BbvI | GCAGC | 7 cut(s) | 58, 173, 238, 772, 3028, 3127, 4106 |
| BccI | CCATC | 9 cut(s) | 220, 798, 2617, 2816, 2896, 3239, 3243, 3278, 3503 |
| BceAI | ACGGC | 8 cut(s) | 92, 115, 2007, 2106, 2205, 2304, 2502, 2991 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1393, 1427 |
| BciVI | GTATCC | 1 cut(s) | 2883 |
| BclI | TGATCA | 2 cut(s) | 892, 3994 |
| BcnI | CCSGG | 2 cut(s) | 2062, 2161 |
| BfaI | CTAG | 5 cut(s) | 210, 552, 3075, 3471, 3482 |
| BfmI | CTRYAG | 3 cut(s) | 1032, 1494, 3397 |
| BfuAI | ACCTGC | 2 cut(s) | 847, 3355 |
| BfuI | GTATCC | 1 cut(s) | 2883 |
| BglII | AGATCT | 2 cut(s) | 548, 1408 |
| BisI | GCNGC | 8 cut(s) | 5, 47, 162, 252, 786, 3042, 3116, 4095 |
| BlsI | GCNGC | 8 cut(s) | 6, 48, 163, 253, 787, 3043, 3117, 4096 |
| Bme18I | GGWCC | 4 cut(s) | 3100, 3683, 3767, 3964 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2685 |
| BmeT110I | CYCGRG | 2 cut(s) | 266, 2988 |
| BmgT120I | GGNCC | 5 cut(s) | 458, 3100, 3683, 3767, 3964 |
| BmiI | GGNNCC | 8 cut(s) | 417, 697, 999, 1160, 1501, 1570, 2907, 3684 |
| BmrI | ACTGGG | 2 cut(s) | 982, 3569 |
| BmuI | ACTGGG | 2 cut(s) | 982, 3569 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2966, 2998 |
| BpmI | CTGGAG | 3 cut(s) | 1098, 3768, 3881 |
| Bpu10I | CCTNAGC | 3 cut(s) | 51, 3906, 4089 |
| Bpu14I | TTCGAA | 3 cut(s) | 343, 1389, 3846 |
| BpuMI | CCSGG | 2 cut(s) | 2062, 2161 |
| BsaBI | GATNNNNATC | 4 cut(s) | 1466, 3288, 3526, 3717 |
| BsaHI | GRCGYC | 1 cut(s) | 102 |
| BsaI | GGTCTC | 2 cut(s) | 2105, 2693 |
| BsaJI | CCNNGG | 5 cut(s) | 460, 727, 828, 2909, 3733 |
| BsaWI | WCCGGW | 3 cut(s) | 314, 1571, 3142 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 142, 271, 1691, 3245, 3442, 3559, 3560 |
| Bse118I | RCCGGY | 1 cut(s) | 314 |
| Bse8I | GATNNNNATC | 4 cut(s) | 1466, 3288, 3526, 3717 |
| BseAI | TCCGGA | 2 cut(s) | 1571, 3142 |
| BseDI | CCNNGG | 5 cut(s) | 460, 727, 828, 2909, 3733 |
| BseJI | GATNNNNATC | 4 cut(s) | 1466, 3288, 3526, 3717 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 142, 271, 1691, 3245, 3442, 3559, 3560 |
| BseMII | CTCAG | 8 cut(s) | 65, 753, 1434, 1472, 2667, 2856, 3057, 4061 |
| BseSI | GKGCMC | 1 cut(s) | 3615 |
| BseXI | GCAGC | 7 cut(s) | 58, 173, 238, 772, 3028, 3127, 4106 |
| BsgI | GTGCAG | 2 cut(s) | 237, 3027 |
| BshFI | GGCC | 5 cut(s) | 117, 459, 1338, 2592, 3006 |
| BshNI | GGYRCC | 1 cut(s) | 1499 |
| BshTI | ACCGGT | 1 cut(s) | 314 |
| BsiHKAI | GWGCWC | 3 cut(s) | 96, 2727, 3615 |
| BsiHKCI | CYCGRG | 2 cut(s) | 266, 2988 |
| BsiSI | CCGG | 5 cut(s) | 315, 1572, 2061, 2160, 3143 |
| BslFI | GGGAC | 2 cut(s) | 2926, 3696 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 142, 271, 1691, 3245, 3442, 3559, 3560 |
| BsmBI | CGTCTC | 2 cut(s) | 115, 4066 |
| BsmFI | GGGAC | 2 cut(s) | 2926, 3696 |
| BsmI | GAATGC | 4 cut(s) | 648, 2735, 2761, 3842 |
| BsnI | GGCC | 5 cut(s) | 117, 459, 1338, 2592, 3006 |
| Bso31I | GGTCTC | 2 cut(s) | 2105, 2693 |
| BsoBI | CYCGRG | 2 cut(s) | 266, 2988 |
| Bsp119I | TTCGAA | 3 cut(s) | 343, 1389, 3846 |
| Bsp1286I | GDGCHC | 3 cut(s) | 96, 2727, 3615 |
| Bsp13I | TCCGGA | 2 cut(s) | 1571, 3142 |
| Bsp1407I | TGTACA | 1 cut(s) | 57 |
| BspACI | CCGC | 4 cut(s) | 5, 25, 3209, 3564 |
| BspANI | GGCC | 5 cut(s) | 117, 459, 1338, 2592, 3006 |
| BspCNI | CTCAG | 8 cut(s) | 64, 754, 1433, 1471, 2668, 2857, 3058, 4062 |
| BspEI | TCCGGA | 2 cut(s) | 1571, 3142 |
| BspLI | GGNNCC | 8 cut(s) | 417, 697, 999, 1160, 1501, 1570, 2907, 3684 |
| BspMI | ACCTGC | 2 cut(s) | 847, 3355 |
| BspQI | GCTCTTC | 1 cut(s) | 2989 |
| BspT104I | TTCGAA | 3 cut(s) | 343, 1389, 3846 |
| BspT107I | GGYRCC | 1 cut(s) | 1499 |
| BspTNI | GGTCTC | 2 cut(s) | 2105, 2693 |
| BsrFI | RCCGGY | 1 cut(s) | 314 |
| BsrGI | TGTACA | 1 cut(s) | 57 |
| BssAI | RCCGGY | 1 cut(s) | 314 |
| BssECI | CCNNGG | 5 cut(s) | 460, 727, 828, 2909, 3733 |
| BssNI | GRCGYC | 1 cut(s) | 102 |
| BssT1I | CCWWGG | 1 cut(s) | 828 |
| Bst4CI | ACNGT | 6 cut(s) | 1495, 2683, 2917, 3504, 3596, 4081 |
| Bst6I | CTCTTC | 3 cut(s) | 470, 2989, 3783 |
| BstACI | GRCGYC | 1 cut(s) | 102 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2543, 3869 |
| BstAUI | TGTACA | 1 cut(s) | 57 |
| BstBI | TTCGAA | 3 cut(s) | 343, 1389, 3846 |
| BstC8I | GCNNGC | 5 cut(s) | 182, 810, 888, 3072, 3798 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 269 |
| BstHHI | GCGC | 1 cut(s) | 135 |
| BstNSI | RCATGY | 2 cut(s) | 3319, 3863 |
| BstSFI | CTRYAG | 3 cut(s) | 1032, 1494, 3397 |
| BstSLI | GKGCMC | 1 cut(s) | 3615 |
| BstV1I | GCAGC | 7 cut(s) | 58, 173, 238, 772, 3028, 3127, 4106 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3792, 4172 |
| BsuI | GTATCC | 1 cut(s) | 2883 |
| BsuRI | GGCC | 5 cut(s) | 117, 459, 1338, 2592, 3006 |
| BtgZI | GCGATG | 1 cut(s) | 4194 |
| BtsI | GCAGTG | 1 cut(s) | 4131 |
| BtsIMutI | CAGTG | 6 cut(s) | 1491, 2673, 2862, 3756, 3792, 4131 |
| BveI | ACCTGC | 2 cut(s) | 847, 3355 |
| Cac8I | GCNNGC | 5 cut(s) | 182, 810, 888, 3072, 3798 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1229, 3347 |
| CfoI | GCGC | 1 cut(s) | 135 |
| Cfr10I | RCCGGY | 1 cut(s) | 314 |
| Cfr13I | GGNCC | 5 cut(s) | 458, 3100, 3683, 3767, 3964 |
| CseI | GACGC | 2 cut(s) | 91, 4083 |
| Csp6I | GTAC | 9 cut(s) | 34, 58, 278, 3095, 3130, 3653, 3689, 4082, 4109 |
| CspAI | ACCGGT | 1 cut(s) | 314 |
| CviQI | GTAC | 9 cut(s) | 34, 58, 278, 3095, 3130, 3653, 3689, 4082, 4109 |
| DraI | TTTAAA | 1 cut(s) | 3084 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2685 |
| EaeI | YGGCCR | 1 cut(s) | 3004 |
| Eam1104I | CTCTTC | 3 cut(s) | 470, 2989, 3783 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2685 |
| EarI | CTCTTC | 3 cut(s) | 470, 2989, 3783 |
| EciI | GGCGGA | 1 cut(s) | 3579 |
| Eco130I | CCWWGG | 1 cut(s) | 828 |
| Eco147I | AGGCCT | 1 cut(s) | 1338 |
| Eco31I | GGTCTC | 2 cut(s) | 2105, 2693 |
| Eco47I | GGWCC | 4 cut(s) | 3100, 3683, 3767, 3964 |
| Eco57I | CTGAAG | 2 cut(s) | 3139, 3677 |
| Eco88I | CYCGRG | 2 cut(s) | 266, 2988 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 269 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3683 |
| EcoRI | GAATTC | 1 cut(s) | 3451 |
| EcoT14I | CCWWGG | 1 cut(s) | 828 |
| EcoT22I | ATGCAT | 2 cut(s) | 3844, 3865 |
| ErhI | CCWWGG | 1 cut(s) | 828 |
| Esp3I | CGTCTC | 2 cut(s) | 115, 4066 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 240, 272, 667, 699 |
| FaqI | GGGAC | 2 cut(s) | 2926, 3696 |
| FauNDI | CATATG | 3 cut(s) | 400, 2935, 3219 |
| FbaI | TGATCA | 2 cut(s) | 892, 3994 |
| Fnu4HI | GCNGC | 8 cut(s) | 5, 47, 162, 252, 786, 3042, 3116, 4095 |
| Fsp4HI | GCNGC | 8 cut(s) | 5, 47, 162, 252, 786, 3042, 3116, 4095 |
| FspBI | CTAG | 5 cut(s) | 210, 552, 3075, 3471, 3482 |
| GlaI | GCGC | 1 cut(s) | 134 |
| GluI | GCNGC | 8 cut(s) | 5, 47, 162, 252, 786, 3042, 3116, 4095 |
| GsuI | CTGGAG | 3 cut(s) | 1098, 3768, 3881 |
| HaeIII | GGCC | 5 cut(s) | 117, 459, 1338, 2592, 3006 |
| HapII | CCGG | 5 cut(s) | 315, 1572, 2061, 2160, 3143 |
| HgaI | GACGC | 2 cut(s) | 91, 4083 |
| HhaI | GCGC | 1 cut(s) | 135 |
| Hin1I | GRCGYC | 1 cut(s) | 102 |
| Hin6I | GCGC | 1 cut(s) | 133 |
| HinP1I | GCGC | 1 cut(s) | 133 |
| HincII | GTYRAC | 2 cut(s) | 970, 1010 |
| HindII | GTYRAC | 2 cut(s) | 970, 1010 |
| HindIII | AAGCTT | 2 cut(s) | 2708, 2879 |
| HpaI | GTTAAC | 1 cut(s) | 970 |
| HpaII | CCGG | 5 cut(s) | 315, 1572, 2061, 2160, 3143 |
| Hpy166II | GTNNAC | 6 cut(s) | 70, 970, 1010, 1184, 3095, 3613 |
| Hpy8I | GTNNAC | 6 cut(s) | 70, 970, 1010, 1184, 3095, 3613 |
| Hpy99I | CGWCG | 3 cut(s) | 101, 107, 125 |
| HpyCH4III | ACNGT | 6 cut(s) | 1495, 2683, 2917, 3504, 3596, 4081 |
| HpyCH4IV | ACGT | 4 cut(s) | 382, 424, 592, 3538 |
| HpySE526I | ACGT | 4 cut(s) | 382, 424, 592, 3538 |
| Hsp92I | GRCGYC | 1 cut(s) | 102 |
| HspAI | GCGC | 1 cut(s) | 133 |
| Kpn2I | TCCGGA | 2 cut(s) | 1571, 3142 |
| Ksp22I | TGATCA | 2 cut(s) | 892, 3994 |
| KspAI | GTTAAC | 1 cut(s) | 970 |
| LguI | GCTCTTC | 1 cut(s) | 2989 |
| LmnI | GCTCC | 7 cut(s) | 701, 1079, 1574, 1647, 1668, 2935, 4176 |
| Lsp1109I | GCAGC | 7 cut(s) | 58, 173, 238, 772, 3028, 3127, 4106 |
| MaeI | CTAG | 5 cut(s) | 210, 552, 3075, 3471, 3482 |
| MaeII | ACGT | 4 cut(s) | 382, 424, 592, 3538 |
| MfeI | CAATTG | 2 cut(s) | 137, 2493 |
| MhlI | GDGCHC | 3 cut(s) | 96, 2727, 3615 |
| MmeI | TCCRAC | 3 cut(s) | 515, 1070, 1373 |
| Mph1103I | ATGCAT | 2 cut(s) | 3844, 3865 |
| MroI | TCCGGA | 2 cut(s) | 1571, 3142 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3852 |
| MseI | TTAA | 8 cut(s) | 537, 716, 969, 1209, 1529, 3083, 3866, 3948 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3975 |
| MspA1I | CMGCKG | 2 cut(s) | 7, 55 |
| MspI | CCGG | 5 cut(s) | 315, 1572, 2061, 2160, 3143 |
| MunI | CAATTG | 2 cut(s) | 137, 2493 |
| Mva1269I | GAATGC | 4 cut(s) | 648, 2735, 2761, 3842 |
| NciI | CCSGG | 2 cut(s) | 2062, 2161 |
| NdeI | CATATG | 3 cut(s) | 400, 2935, 3219 |
| NlaIV | GGNNCC | 8 cut(s) | 417, 697, 999, 1160, 1501, 1570, 2907, 3684 |
| NmeAIII | GCCGAG | 1 cut(s) | 178 |
| NmuCI | GTSAC | 7 cut(s) | 293, 2669, 3201, 3590, 4129, 4187, 4208 |
| NsiI | ATGCAT | 2 cut(s) | 3844, 3865 |
| NspI | RCATGY | 2 cut(s) | 3319, 3863 |
| NspV | TTCGAA | 3 cut(s) | 343, 1389, 3846 |
| PaeR7I | CTCGAG | 1 cut(s) | 266 |
| PaqCI | CACCTGC | 1 cut(s) | 847 |
| PceI | AGGCCT | 1 cut(s) | 1338 |
| PciI | ACATGT | 1 cut(s) | 3315 |
| PciSI | GCTCTTC | 1 cut(s) | 2989 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 105 |
| PctI | GAATGC | 4 cut(s) | 648, 2735, 2761, 3842 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3852 |
| PflFI | GACNNNGTC | 1 cut(s) | 101 |
| PinAI | ACCGGT | 1 cut(s) | 314 |
| PkrI | GCNGC | 8 cut(s) | 6, 48, 163, 253, 787, 3043, 3117, 4096 |
| PpuMI | RGGWCCY | 1 cut(s) | 3683 |
| PscI | ACATGT | 1 cut(s) | 3315 |
| Psp5II | RGGWCCY | 1 cut(s) | 3683 |
| PspN4I | GGNNCC | 8 cut(s) | 417, 697, 999, 1160, 1501, 1570, 2907, 3684 |
| PspPI | GGNCC | 5 cut(s) | 458, 3100, 3683, 3767, 3964 |
| PspPPI | RGGWCCY | 1 cut(s) | 3683 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1229, 3347 |
| PsyI | GACNNNGTC | 1 cut(s) | 101 |
| PvuII | CAGCTG | 1 cut(s) | 55 |
| RsaI | GTAC | 9 cut(s) | 35, 59, 279, 3096, 3131, 3654, 3690, 4083, 4110 |
| RsaNI | GTAC | 9 cut(s) | 34, 58, 278, 3095, 3130, 3653, 3689, 4082, 4109 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3975 |
| SapI | GCTCTTC | 1 cut(s) | 2989 |
| SaqAI | TTAA | 8 cut(s) | 537, 716, 969, 1209, 1529, 3083, 3866, 3948 |
| SatI | GCNGC | 8 cut(s) | 5, 47, 162, 252, 786, 3042, 3116, 4095 |
| Sau96I | GGNCC | 5 cut(s) | 458, 3100, 3683, 3767, 3964 |
| SduI | GDGCHC | 3 cut(s) | 96, 2727, 3615 |
| SfcI | CTRYAG | 3 cut(s) | 1032, 1494, 3397 |
| Sfr274I | CTCGAG | 1 cut(s) | 266 |
| SfuI | TTCGAA | 3 cut(s) | 343, 1389, 3846 |
| SgrAI | CRCCGGYG | 1 cut(s) | 314 |
| SinI | GGWCC | 4 cut(s) | 3100, 3683, 3767, 3964 |
| SlaI | CTCGAG | 1 cut(s) | 266 |
| SmiI | ATTTAAAT | 1 cut(s) | 3084 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3975 |
| SseBI | AGGCCT | 1 cut(s) | 1338 |
| SsiI | CCGC | 4 cut(s) | 5, 25, 3209, 3564 |
| SspMI | CTAG | 5 cut(s) | 210, 552, 3075, 3471, 3482 |
| StuI | AGGCCT | 1 cut(s) | 1338 |
| StyI | CCWWGG | 1 cut(s) | 828 |
| SwaI | ATTTAAAT | 1 cut(s) | 3084 |
| TaaI | ACNGT | 6 cut(s) | 1495, 2683, 2917, 3504, 3596, 4081 |
| TaiI | ACGT | 4 cut(s) | 385, 427, 595, 3541 |
| TatI | WGTACW | 6 cut(s) | 33, 57, 277, 3094, 3652, 3688 |
| TauI | GCSGC | 1 cut(s) | 7 |
| Tru1I | TTAA | 8 cut(s) | 537, 716, 969, 1209, 1529, 3083, 3866, 3948 |
| Tru9I | TTAA | 8 cut(s) | 537, 716, 969, 1209, 1529, 3083, 3866, 3948 |
| TscAI | CASTG | 6 cut(s) | 1498, 2680, 2869, 3756, 3792, 4138 |
| TseFI | GTSAC | 7 cut(s) | 293, 2669, 3201, 3590, 4129, 4187, 4208 |
| TseI | GCWGC | 7 cut(s) | 46, 161, 251, 785, 3041, 3115, 4094 |
| Tsp45I | GTSAC | 7 cut(s) | 293, 2669, 3201, 3590, 4129, 4187, 4208 |
| TspGWI | ACGGA | 2 cut(s) | 2865, 3075 |
| TspRI | CASTG | 6 cut(s) | 1498, 2680, 2869, 3756, 3792, 4138 |
| Tth111I | GACNNNGTC | 1 cut(s) | 101 |
| VneI | GTGCAC | 1 cut(s) | 3611 |
| VpaK11BI | GGWCC | 4 cut(s) | 3100, 3683, 3767, 3964 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 269 |
| XapI | RAATTY | 5 cut(s) | 443, 1358, 2572, 3365, 3451 |
| XbaI | TCTAGA | 2 cut(s) | 209, 3481 |
| XceI | RCATGY | 2 cut(s) | 3319, 3863 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 706, 3242, 3974 |
| XhoI | CTCGAG | 1 cut(s) | 266 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3852 |
| XspI | CTAG | 5 cut(s) | 210, 552, 3075, 3471, 3482 |
| Zsp2I | ATGCAT | 2 cut(s) | 3844, 3865 |