Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0004470

Physical Location & Seq

Genomic Coordinates Reverse (-)

6774150 .. 6780829

Gene Structure 6680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG079600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3108 bp

ATGGTTCGCGTTCAACACATTGAAGCTGCACTTCCTCCCCTTGAGAAGGCTGTACTTGCTCAAACAAGCCACATACATTTTGCATACACAGCTGGTTTAGAGTGGCATCCACGTATTCGAAGTGAAAGACATCATTTCATCTACAATGACTTGCCACGCTTTATCATGGATTCGTATGAAGAATGTAGCGATCCTCCGCGTTTGCACTTGCTTGACAAATTTGATACTGGGGGTCCAGGATCTTGTTTAAAGAGATATTCAGATCCAACATTTTTCAAAAGAGCATCAGCTATCTCTGATGAAGCAAATGCTGAAAAAATCCAAAGAGATAGGAAGGCTCAAAGAAGCAAGAAAAAGAAAGGATCACAGCATAATGGAGATGTGTCACGTTCTGCATCGATATCCAATCGCAGTAGCAGAATGCAACCTATTTCTTCTAATGTGAATCGGCAAAGCTCGCCTTCGCAAACTGTCTCCACAACTGACATGGCGGCATTAAAGTCTGACCTGGGAAACAATTCTAATTCTTTTGGTTCAAGAACTGAGTCAGGATATAATGAGTATTTTGCCCATTCAAGTTCCTCCCTGCAAGCCAAACAACAAGAATACAAGGAGTCCCCTACTTCTGAATCTGTGCATCATGATGATACTCTTGAATCTGTTTTGCATGATGGTGAAACTGTGTTTGTAGATGGTAACTCTCCTGGAAGTTCATTACAGGACCAAGTTACCTCTGGTTCATCTTGTGGTAAATGGGATGAGAAGGCAGAAATAGTAGATCCTACAGGTCAACAGAAGTGTTTAGATGAAACTACAGAAACGCTCCCTACAATGGATGACTCGGATGCACATGAAGGGGGAGCTGGTCACATTAAGAGTATTCAGCAAAACGATTTCCTCTTTGATGGCGAAAATATTTTGGAGCCAACCTCGAGCAGGAACCAAATTGATGAAATTGAAAGTGAACCAGATGAACCAGATACTTTCATGGATGCACTTAACACCATTGAATCAGAATCCGAAAATGATCTTGATTGTCAAACAAAACGAGAAGTGAAACATGTCCCTACTTTTGTCAACAAGAAAGGACTGGATGCAGTGCATGATATTACCATGGATTGTTTGAATCCTCAAACTCCAAGGTTTGAAACTCATACTGCAACATCTCACAGTTCCCCGGAAAGAGAAACGCCGGTGGATCTACCAAACTTAGCGTCATTAGAGAGCCCTGTCCCTGAGCAGATCCCTCAAGTAGTTATGGAACCTTCTAATTCAAACCACTCTGTAGGCTCTGATAGAACTGAAAATCTTGATGATTCAAGGTTGGAAACTGTTAATTGTGATTCAGCATCCTCTGGCTCTGGAACTACTAATGTGCAGGATAACATCATAAGCAGTTTACGTGAACCTCAAGACTCTCCTGCTGACATTTCCAGGAATAATTCAATAAATTTCTGGACTAATGGTGGCATGTTAGGACTTGAGCCATCAAAACCTCCTGATTTCACCATGGCAAGTCCTGTAAATCCAGCTAGCAGTAGTACATCTGAGACAATTGGTCTCTCAAATCATGCTTACAAGATTATAGTCGACGAGCATGAAATGGAACCAAGCATGTTGACCATGGATGATCGATGTAATGATAAAGGTCAAGAGGATGGTATCTCATCAGAGAAAATATCTAAGGGAGTTTCACCTACGGAATTGTATACAAAGCTTGGAAATATTGATGATTCTGATAAGAGCAATGGATTTGGCCATGCCATGGAGGATGGTTGGAAAAAAACCAACGCAATGGAACCTGGAATTGTGTTACCAGTTGCTCCATATACTAAATCTGCTTCCAATGACTTACATCAGGAGAATGATGAAAACTCTTCTCTGGTTTTCGGACTTGGTCGTAGGTTACTTGAGAATGGTTTTGGTAGAAATGTATCGTATGACAAATTTGAGCCTGCTAGTTATTTGAATGCTGGTGAATTGGAGCAGAAAAGCGAGCACCAGAGTGTAGTGTACCAATCATTTCCTGATACAGCCTTCAAAGAGCAGTCTGAGGATGGATTTGCAGTTCATTCATCTCCTTCTTCACCACCACTTGAGCACATGAAGATATCTTTCCAACCCATAAATGGCATTGAAACTTCCAAACTAAAACTGAAATTATCTGATGGGAATCAAAGCCATGGAAGTGTAAGAGATACGTTTCAGTCATTCCAGCTGATCCCAGAACCTGCTATCCCTCTGCATGAATTTGGTTCTGATTCTGACGATGACACCTTCTGTCGATCATCTCCTTACATATCTGATGATTGTGTTAGCCATCACTCTGAGTCCAATTCTGAACAGTGGGAGTCTAGTGAAACTCCGGAGAGAGACAACCATGAACTTTATGATGCCTTGCGTGGAATCTCATCAGCAGAACACTTTTCCAGCTCCCCAGAACTAGGGGAAATAGGCAGCAATGCCATTTATAGTGAAGGTGGAATCAAAAGTGTTCACTCTGAGAATGGTATGGTACAGTATCTCTCTGATCCTTTACTTGATCTTCCAAGCTTAGATGCTTTTAAACCTGTACTCCTGCAAGAACCAAAAGATGATTCTACACCAATGGATGTCCATGGTTTGAGATGTCCTGGGGAATCTACACCAGGACCACCACCTCTCCCTCCAGTGGAATGGTGCCTTTCAAAGCCTCAGTTAGATGCTACAGAAGAAAATCACGATGTATCTGAAGGTTTTAAACATGTACTTGATACAGACCTCTTGGGGTCTATCACCTTCCAGCAACCACCATTGAAGCAACAAGAAGTGAATGAAGAGCCTCTTTCTATTGAACCAAAAATCAAGAACCAGCAGGTGAATGAACACAAAGAAGCTGATCAGGCTCTAAACAGCAAAGAGATAGACGAAAAGGACGATTTCTTACAACAAATCAGAACACAGTCATTCAACCTGAGACGCACAGTGACAGCAAAGGCAACAACTACGACACCAGGACCCGCTACCCATGTCAAAGTCACTGCAATTTTGGAGAAAGCAAATGCCATCCGCCAGGCTGTTGGGAGCGATGATGGGGATGATGATGATGACGATACCTGGAGTACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0003785 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0016020 GO:0016043 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0032991 GO:0033043 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051125 GO:0051127 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1035

Amino Acids

114.03

Weight (kDa)

4.66

Isoelectric Point (pI)

53.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004470)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29170 AT1G29170 AT1G29170 AT2G34150 AT2G34150 AT2G34150 AT2G34150 AT2G34150
fragaria_vesca	FvH4_3g07780 FvH4_3g07780 FvH4_3g07780 FvH4_3g07780
malus_domestica	MD00G1207000.v1.1 MD05G1300900.v1.1 MD05G1301000.v1.1 MD10G1279900.v1.1
prunus_persica	Prupe.4G061600_v2.0.a1 Prupe.4G061600_v2.0.a1
pyrus_communis	pycom05g27880 pycom10g23370
rosa_chinensis	RchiOBHm_Chr5g0010801
rosa_laevigata	RLG00000031781
rosa_multiflora	Rmu_sc0000109.1_g000018
rosa_roxburghii	Rroxscaffold_1G00065580
rosa_rugosa	Rorug04G0452600 Rorug04G0452700
rosa_samantha	Rh5AG084800 Rh5BG079600 Rh5CG092300 Rh5DG079700
rosa_wichuraiana	Rw0G000540 Rw0G022250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2845
Acc36I	ACCTGC	2 cut(s)	2239, 2845
AccB1I	GGYRCC	1 cut(s)	2679
AccB7I	CCANNNNNTGG	1 cut(s)	1765
AccI	GTMKAC	2 cut(s)	1590, 1709
AccII	CGCG	2 cut(s)	9, 199
AccIII	TCCGGA	1 cut(s)	2365
AciI	CCGC	4 cut(s)	197, 491, 3000, 3049
AclWI	GGATC	9 cut(s)	185, 247, 257, 370, 773, 1206, 1237, 2215, 2525
AcoI	YGGCCR	1 cut(s)	1756
AcsI	RAATTY	4 cut(s)	218, 1450, 1946, 2249
AcuI	CTGAAG	1 cut(s)	2751
AfaI	GTAC	7 cut(s)	54, 1543, 2015, 2517, 2574, 2748, 3103
AfiI	CCNNNNNNNGG	7 cut(s)	46, 832, 936, 1765, 2129, 2444, 2671
AflIII	ACRYGT	2 cut(s)	1060, 2743
AhdI	GACNNNNNGTC	1 cut(s)	1557
AjuI	GAANNNNNNNTTGG	2 cut(s)	2581, 2613
AleI	CACNNNNGTG	1 cut(s)	2004
AloI	GAACNNNNNNTCC	4 cut(s)	2052, 2084, 2220, 2252
Alw21I	GWGCWC	2 cut(s)	2001, 2103
Alw26I	GTCTC	5 cut(s)	478, 1544, 1565, 2367, 2950
AlwI	GGATC	9 cut(s)	185, 247, 257, 370, 773, 1206, 1237, 2215, 2525
AlwNI	CAGNNNCTG	1 cut(s)	2231
Ama87I	CYCGRG	1 cut(s)	931
Aor13HI	TCCGGA	1 cut(s)	2365
AoxI	GGCC	1 cut(s)	1756
ApeKI	GCWGC	2 cut(s)	26, 2457
ApoI	RAATTY	4 cut(s)	218, 1450, 1946, 2249
ArsI	GACNNNNNNTTYG	2 cut(s)	1199, 1231
Asp700I	GAANNNNTTC	1 cut(s)	517
AspS9I	GGNCC	4 cut(s)	233, 721, 2651, 2996
AsuC2I	CCSGG	1 cut(s)	1178
AsuHPI	GGTGA	7 cut(s)	686, 1498, 1686, 1988, 2079, 2767, 2869
AsuII	TTCGAA	1 cut(s)	118
AsuNHI	GCTAGC	1 cut(s)	1532
AvaI	CYCGRG	1 cut(s)	931
AvaII	GGWCC	4 cut(s)	233, 721, 2651, 2996
BalI	TGGCCA	1 cut(s)	1758
BanI	GGYRCC	1 cut(s)	2679
BanII	GRGCYC	1 cut(s)	1229
Bbv12I	GWGCWC	2 cut(s)	2001, 2103
BbvI	GCAGC	2 cut(s)	13, 2469
BclI	TGATCA	1 cut(s)	2878
BcnI	CCSGG	1 cut(s)	1178
BcoDI	GTCTC	5 cut(s)	478, 1544, 1565, 2367, 2950
BfaI	CTAG	4 cut(s)	1533, 1959, 2355, 2444
BfmI	CTRYAG	4 cut(s)	783, 813, 1284, 2706
BfuAI	ACCTGC	2 cut(s)	2239, 2845
BisI	GCNGC	3 cut(s)	27, 492, 2458
BlsI	GCNGC	3 cut(s)	28, 493, 2459
BmcAI	AGTACT	1 cut(s)	3103
Bme18I	GGWCC	4 cut(s)	233, 721, 2651, 2996
BmeRI	GACNNNNNGTC	1 cut(s)	1557
BmeT110I	CYCGRG	1 cut(s)	931
BmgT120I	GGNCC	4 cut(s)	233, 721, 2651, 2996
BmiI	GGNNCC	8 cut(s)	234, 924, 941, 1263, 1608, 1800, 2681, 2998
BmrI	ACTGGG	1 cut(s)	237
BmtI	GCTAGC	1 cut(s)	1536
BmuI	ACTGGG	1 cut(s)	237
BplI	GAGNNNNNCTC	2 cut(s)	914, 946
BpmI	CTGGAG	1 cut(s)	2652
Bpu10I	CCTNAGC	1 cut(s)	1236
Bpu14I	TTCGAA	1 cut(s)	118
BpuEI	CTTGAG	6 cut(s)	62, 1233, 1395, 1502, 1931, 2117
BpuMI	CCSGG	1 cut(s)	1178
Bsa29I	ATCGAT	2 cut(s)	398, 1633
BsaAI	YACGTR	2 cut(s)	113, 1403
BsaBI	GATNNNNATC	1 cut(s)	2172
BsaI	GGTCTC	1 cut(s)	1565
BsaWI	WCCGGW	1 cut(s)	2365
BsaXI	ACNNNNNCTCC	4 cut(s)	2559, 2589, 2646, 2676
Bsc4I	CCNNNNNNNGG	7 cut(s)	46, 832, 936, 1765, 2129, 2444, 2671
Bse118I	RCCGGY	1 cut(s)	1192
Bse1I	ACTGG	4 cut(s)	232, 1095, 1817, 2669
Bse3DI	GCAATG	3 cut(s)	1753, 1800, 2467
Bse8I	GATNNNNATC	1 cut(s)	2172
BseAI	TCCGGA	1 cut(s)	2365
BseCI	ATCGAT	2 cut(s)	398, 1633
BseJI	GATNNNNATC	1 cut(s)	2172
BseLI	CCNNNNNNNGG	7 cut(s)	46, 832, 936, 1765, 2129, 2444, 2671
BseMI	GCAATG	3 cut(s)	1753, 1800, 2467
BseMII	CTCAG	8 cut(s)	534, 1227, 1539, 2043, 2319, 2493, 2708, 2945
BseNI	ACTGG	4 cut(s)	232, 1095, 1817, 2669
BseXI	GCAGC	2 cut(s)	13, 2469
BsgI	GTGCAG	2 cut(s)	12, 1397
Bsh1236I	CGCG	2 cut(s)	9, 199
BshFI	GGCC	1 cut(s)	1758
BshNI	GGYRCC	1 cut(s)	2679
BshVI	ATCGAT	2 cut(s)	398, 1633
BsiHKAI	GWGCWC	2 cut(s)	2001, 2103
BsiHKCI	CYCGRG	1 cut(s)	931
BsiSI	CCGG	3 cut(s)	1178, 1193, 2366
BslFI	GGGAC	3 cut(s)	601, 1049, 1217
BslI	CCNNNNNNNGG	7 cut(s)	46, 832, 936, 1765, 2129, 2444, 2671
BsmAI	GTCTC	5 cut(s)	478, 1544, 1565, 2367, 2950
BsmBI	CGTCTC	1 cut(s)	2950
BsmFI	GGGAC	3 cut(s)	601, 1049, 1217
BsmI	GAATGC	2 cut(s)	426, 1975
BsnI	GGCC	1 cut(s)	1758
Bso31I	GGTCTC	1 cut(s)	1565
BsoBI	CYCGRG	1 cut(s)	931
Bsp119I	TTCGAA	1 cut(s)	118
Bsp1286I	GDGCHC	3 cut(s)	1229, 2001, 2103
Bsp13I	TCCGGA	1 cut(s)	2365
Bsp19I	CCATGG	6 cut(s)	1113, 1509, 1623, 1764, 2182, 2617
BspACI	CCGC	4 cut(s)	197, 491, 3000, 3049
BspANI	GGCC	1 cut(s)	1758
BspCNI	CTCAG	8 cut(s)	535, 1228, 1540, 2044, 2320, 2494, 2707, 2946
BspDI	ATCGAT	2 cut(s)	398, 1633
BspEI	TCCGGA	1 cut(s)	2365
BspFNI	CGCG	2 cut(s)	9, 199
BspHI	TCATGA	1 cut(s)	640
BspLI	GGNNCC	8 cut(s)	234, 924, 941, 1263, 1608, 1800, 2681, 2998
BspMI	ACCTGC	2 cut(s)	2239, 2845
BspOI	GCTAGC	1 cut(s)	1536
BspPI	GGATC	9 cut(s)	185, 247, 257, 370, 773, 1206, 1237, 2215, 2525
BspQI	GCTCTTC	1 cut(s)	2811
BspT104I	TTCGAA	1 cut(s)	118
BspT107I	GGYRCC	1 cut(s)	2679
BspTNI	GGTCTC	1 cut(s)	1565
BsrDI	GCAATG	3 cut(s)	1753, 1800, 2467
BsrFI	RCCGGY	1 cut(s)	1192
BsrI	ACTGG	4 cut(s)	232, 1095, 1817, 2669
BssAI	RCCGGY	1 cut(s)	1192
BssNAI	GTATAC	1 cut(s)	1710
BssT1I	CCWWGG	7 cut(s)	1113, 1139, 1509, 1623, 1764, 2182, 2617
Bst1107I	GTATAC	1 cut(s)	1710
Bst4CI	ACNGT	8 cut(s)	472, 682, 1172, 1333, 2346, 2520, 2943, 2965
Bst6I	CTCTTC	2 cut(s)	1882, 2811
BstBAI	YACGTR	2 cut(s)	113, 1403
BstBI	TTCGAA	1 cut(s)	118
BstC8I	GCNNGC	5 cut(s)	458, 591, 1534, 1956, 1997
BstDSI	CCRYGG	6 cut(s)	1113, 1509, 1623, 1764, 2182, 2617
BstENI	CCTNNNNNAGG	2 cut(s)	44, 934
BstFNI	CGCG	2 cut(s)	9, 199
BstMAI	GTCTC	5 cut(s)	478, 1544, 1565, 2367, 2950
BstMWI	GCNNNNNNNGC	4 cut(s)	56, 89, 457, 2882
BstNSI	RCATGY	4 cut(s)	1064, 1474, 1618, 2747
BstSFI	CTRYAG	4 cut(s)	783, 813, 1284, 2706
BstUI	CGCG	2 cut(s)	9, 199
BstV1I	GCAGC	2 cut(s)	13, 2469
BstX2I	RGATCY	5 cut(s)	239, 262, 778, 1198, 1242
BstXI	CCANNNNNNTGG	3 cut(s)	1795, 2676, 3059
BstYI	RGATCY	5 cut(s)	239, 262, 778, 1198, 1242
BstZ17I	GTATAC	1 cut(s)	1710
Bsu15I	ATCGAT	2 cut(s)	398, 1633
BsuRI	GGCC	1 cut(s)	1758
BsuTUI	ATCGAT	2 cut(s)	398, 1633
BtgI	CCRYGG	6 cut(s)	1113, 1509, 1623, 1764, 2182, 2617
BtgZI	GCGATG	1 cut(s)	3081
BtsI	GCAGTG	2 cut(s)	1104, 3018
BtsIMutI	CAGTG	5 cut(s)	1104, 2351, 2676, 2970, 3018
BveI	ACCTGC	2 cut(s)	2239, 2845
Cac8I	GCNNGC	5 cut(s)	458, 591, 1534, 1956, 1997
CaiI	CAGNNNCTG	1 cut(s)	2231
CciI	TCATGA	1 cut(s)	640
Cfr10I	RCCGGY	1 cut(s)	1192
Cfr13I	GGNCC	4 cut(s)	233, 721, 2651, 2996
ClaI	ATCGAT	2 cut(s)	398, 1633
CseI	GACGC	2 cut(s)	1203, 2967
Csp6I	GTAC	7 cut(s)	53, 1542, 2014, 2516, 2573, 2747, 3102
CviQI	GTAC	7 cut(s)	53, 1542, 2014, 2516, 2573, 2747, 3102
DraI	TTTAAA	3 cut(s)	249, 2566, 2740
DriI	GACNNNNNGTC	1 cut(s)	1557
EaeI	YGGCCR	1 cut(s)	1756
Eam1104I	CTCTTC	2 cut(s)	1882, 2811
Eam1105I	GACNNNNNGTC	1 cut(s)	1557
EarI	CTCTTC	2 cut(s)	1882, 2811
EciI	GGCGGA	1 cut(s)	3038
Eco130I	CCWWGG	7 cut(s)	1113, 1139, 1509, 1623, 1764, 2182, 2617
Eco24I	GRGCYC	1 cut(s)	1229
Eco31I	GGTCTC	1 cut(s)	1565
Eco32I	GATATC	2 cut(s)	402, 2112
Eco47I	GGWCC	4 cut(s)	233, 721, 2651, 2996
Eco57I	CTGAAG	1 cut(s)	2751
Eco88I	CYCGRG	1 cut(s)	931
EcoNI	CCTNNNNNAGG	2 cut(s)	44, 934
EcoO109I	RGGNCCY	1 cut(s)	2996
EcoRV	GATATC	2 cut(s)	402, 2112
EcoT14I	CCWWGG	7 cut(s)	1113, 1139, 1509, 1623, 1764, 2182, 2617
EcoT38I	GRGCYC	1 cut(s)	1229
ErhI	CCWWGG	7 cut(s)	1113, 1139, 1509, 1623, 1764, 2182, 2617
Esp3I	CGTCTC	1 cut(s)	2950
FalI	AAGNNNNNCTT	6 cut(s)	15, 47, 445, 477, 2808, 2840
FaqI	GGGAC	3 cut(s)	601, 1049, 1217
FauI	CCCGC	1 cut(s)	3007
FbaI	TGATCA	1 cut(s)	2878
FblI	GTMKAC	2 cut(s)	1590, 1709
Fnu4HI	GCNGC	3 cut(s)	27, 492, 2458
FriOI	GRGCYC	1 cut(s)	1229
Fsp4HI	GCNGC	3 cut(s)	27, 492, 2458
FspBI	CTAG	4 cut(s)	1533, 1959, 2355, 2444
GluI	GCNGC	3 cut(s)	27, 492, 2458
GsuI	CTGGAG	1 cut(s)	2652
HaeIII	GGCC	1 cut(s)	1758
HapII	CCGG	3 cut(s)	1178, 1193, 2366
HgaI	GACGC	2 cut(s)	1203, 2967
HincII	GTYRAC	4 cut(s)	791, 1078, 1591, 1620
HindII	GTYRAC	4 cut(s)	791, 1078, 1591, 1620
HindIII	AAGCTT	2 cut(s)	1715, 2551
HpaII	CCGG	3 cut(s)	1178, 1193, 2366
HphI	GGTGA	7 cut(s)	686, 1498, 1686, 1988, 2079, 2767, 2869
Hpy99I	CGWCG	1 cut(s)	1595
HpyCH4III	ACNGT	8 cut(s)	472, 682, 1172, 1333, 2346, 2520, 2943, 2965
HpyCH4IV	ACGT	4 cut(s)	112, 388, 1402, 2201
HpyF10VI	GCNNNNNNNGC	4 cut(s)	56, 89, 457, 2882
HpySE526I	ACGT	4 cut(s)	112, 388, 1402, 2201
Kpn2I	TCCGGA	1 cut(s)	2365
Ksp22I	TGATCA	1 cut(s)	2878
LguI	GCTCTTC	1 cut(s)	2811
LmnI	GCTCC	7 cut(s)	828, 860, 922, 1828, 1984, 2438, 3063
Lsp1109I	GCAGC	2 cut(s)	13, 2469
MaeI	CTAG	4 cut(s)	1533, 1959, 2355, 2444
MaeII	ACGT	4 cut(s)	112, 388, 1402, 2201
MaeIII	GTNAC	8 cut(s)	384, 695, 727, 866, 1812, 1905, 2965, 3016
MboII	GAAGA	8 cut(s)	191, 426, 1869, 2076, 2119, 2537, 2723, 2828
MfeI	CAATTG	1 cut(s)	1554
MflI	RGATCY	5 cut(s)	239, 262, 778, 1198, 1242
MhlI	GDGCHC	3 cut(s)	1229, 2001, 2103
MlsI	TGGCCA	1 cut(s)	1758
MluNI	TGGCCA	1 cut(s)	1758
MlyI	GAGTC	6 cut(s)	554, 623, 833, 1409, 2339, 2360
MmeI	TCCRAC	4 cut(s)	290, 1305, 1757, 2143
Mox20I	TGGCCA	1 cut(s)	1758
MroI	TCCGGA	1 cut(s)	2365
MroXI	GAANNNNTTC	1 cut(s)	517
MscI	TGGCCA	1 cut(s)	1758
MseI	TTAA	8 cut(s)	248, 497, 873, 999, 1335, 2565, 2739, 3106
MslI	CAYNNNNRTG	4 cut(s)	642, 672, 2004, 2187
Msp20I	TGGCCA	1 cut(s)	1758
MspA1I	CMGCKG	2 cut(s)	92, 2218
MspI	CCGG	3 cut(s)	1178, 1193, 2366
MunI	CAATTG	1 cut(s)	1554
Mva1269I	GAATGC	2 cut(s)	426, 1975
MvnI	CGCG	2 cut(s)	9, 199
MwoI	GCNNNNNNNGC	4 cut(s)	56, 89, 457, 2882
NciI	CCSGG	1 cut(s)	1178
NcoI	CCATGG	6 cut(s)	1113, 1509, 1623, 1764, 2182, 2617
NheI	GCTAGC	1 cut(s)	1532
NlaIV	GGNNCC	8 cut(s)	234, 924, 941, 1263, 1608, 1800, 2681, 2998
NmuCI	GTSAC	4 cut(s)	384, 866, 2965, 3016
NspI	RCATGY	4 cut(s)	1064, 1474, 1618, 2747
NspV	TTCGAA	1 cut(s)	118
OliI	CACNNNNGTG	1 cut(s)	2004
PaeR7I	CTCGAG	1 cut(s)	931
PagI	TCATGA	1 cut(s)	640
PaqCI	CACCTGC	1 cut(s)	2845
PciI	ACATGT	2 cut(s)	1060, 2743
PciSI	GCTCTTC	1 cut(s)	2811
PcsI	WCGNNNNNNNCGW	1 cut(s)	2913
PctI	GAATGC	2 cut(s)	426, 1975
PdmI	GAANNNNTTC	1 cut(s)	517
PflFI	GACNNNGTC	1 cut(s)	1896
PflMI	CCANNNNNTGG	1 cut(s)	1765
PfoI	TCCNGGA	3 cut(s)	235, 703, 1433
PkrI	GCNGC	3 cut(s)	28, 493, 2459
PleI	GAGTC	6 cut(s)	553, 622, 833, 1409, 2338, 2359
PpsI	GAGTC	6 cut(s)	553, 622, 833, 1409, 2338, 2359
Ppu21I	YACGTR	2 cut(s)	113, 1403
PpuMI	RGGWCCY	1 cut(s)	2996
PscI	ACATGT	2 cut(s)	1060, 2743
Psp5II	RGGWCCY	1 cut(s)	2996
PspN4I	GGNNCC	8 cut(s)	234, 924, 941, 1263, 1608, 1800, 2681, 2998
PspPI	GGNCC	4 cut(s)	233, 721, 2651, 2996
PspPPI	RGGWCCY	1 cut(s)	2996
PspXI	VCTCGAGB	1 cut(s)	931
PstNI	CAGNNNCTG	1 cut(s)	2231
PsuI	RGATCY	5 cut(s)	239, 262, 778, 1198, 1242
PsyI	GACNNNGTC	1 cut(s)	1896
PvuII	CAGCTG	2 cut(s)	92, 2218
RsaI	GTAC	7 cut(s)	54, 1543, 2015, 2517, 2574, 2748, 3103
RsaNI	GTAC	7 cut(s)	53, 1542, 2014, 2516, 2573, 2747, 3102
RseI	CAYNNNNRTG	4 cut(s)	642, 672, 2004, 2187
SalI	GTCGAC	1 cut(s)	1589
SapI	GCTCTTC	1 cut(s)	2811
SaqAI	TTAA	8 cut(s)	248, 497, 873, 999, 1335, 2565, 2739, 3106
SatI	GCNGC	3 cut(s)	27, 492, 2458
Sau96I	GGNCC	4 cut(s)	233, 721, 2651, 2996
ScaI	AGTACT	1 cut(s)	3103
SchI	GAGTC	6 cut(s)	554, 623, 833, 1409, 2339, 2360
SduI	GDGCHC	3 cut(s)	1229, 2001, 2103
SfcI	CTRYAG	4 cut(s)	783, 813, 1284, 2706
Sfr274I	CTCGAG	1 cut(s)	931
SfuI	TTCGAA	1 cut(s)	118
SgrAI	CRCCGGYG	1 cut(s)	1192
SinI	GGWCC	4 cut(s)	233, 721, 2651, 2996
SlaI	CTCGAG	1 cut(s)	931
SmiMI	CAYNNNNRTG	4 cut(s)	642, 672, 2004, 2187
SmlI	CTYRAG	7 cut(s)	41, 931, 1248, 1410, 1481, 1910, 2096
SmoI	CTYRAG	7 cut(s)	41, 931, 1248, 1410, 1481, 1910, 2096
SsiI	CCGC	4 cut(s)	197, 491, 3000, 3049
SspI	AATATT	2 cut(s)	916, 1726
SspMI	CTAG	4 cut(s)	1533, 1959, 2355, 2444
StyI	CCWWGG	7 cut(s)	1113, 1139, 1509, 1623, 1764, 2182, 2617
TaaI	ACNGT	8 cut(s)	472, 682, 1172, 1333, 2346, 2520, 2943, 2965
TaiI	ACGT	4 cut(s)	115, 391, 1405, 2204
TaqI	TCGA	6 cut(s)	118, 398, 932, 1590, 1633, 2284
TatI	WGTACW	5 cut(s)	52, 1541, 2572, 2746, 3101
TauI	GCSGC	1 cut(s)	494
Tru1I	TTAA	8 cut(s)	248, 497, 873, 999, 1335, 2565, 2739, 3106
Tru9I	TTAA	8 cut(s)	248, 497, 873, 999, 1335, 2565, 2739, 3106
TscAI	CASTG	5 cut(s)	1104, 2351, 2676, 2970, 3025
TseFI	GTSAC	4 cut(s)	384, 866, 2965, 3016
TseI	GCWGC	2 cut(s)	26, 2457
Tsp45I	GTSAC	4 cut(s)	384, 866, 2965, 3016
TspGWI	ACGGA	1 cut(s)	1715
TspRI	CASTG	5 cut(s)	1104, 2351, 2676, 2970, 3025
Tth111I	GACNNNGTC	1 cut(s)	1896
Van91I	CCANNNNNTGG	1 cut(s)	1765
VpaK11BI	GGWCC	4 cut(s)	233, 721, 2651, 2996
XagI	CCTNNNNNAGG	2 cut(s)	44, 934
XapI	RAATTY	4 cut(s)	218, 1450, 1946, 2249
XceI	RCATGY	4 cut(s)	1064, 1474, 1618, 2747
XcmI	CCANNNNNNNNNTGG	3 cut(s)	484, 731, 2126
XhoI	CTCGAG	1 cut(s)	931
XmiI	GTMKAC	2 cut(s)	1590, 1709
XmnI	GAANNNNTTC	1 cut(s)	517
XspI	CTAG	4 cut(s)	1533, 1959, 2355, 2444
ZrmI	AGTACT	1 cut(s)	3103

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.