Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0004470

Physical Location & Seq

Genomic Coordinates Reverse (-)

8185247 .. 8190742

Gene Structure 5496 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031781

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3192 bp

ATGCCTCTGGTGAGGTTTCAGGTGAGGAACGAGTATGCTCTGGGTCAGCCTCAGCTGTACAAGGAGGCTGACAGAGAAGATCCCAAGGCCGTGCTCGACGGTGTTGCCGTTGCCGGCCTCGTCGGGATCTTGCGCCAATTGGGGGATCTCGCCGAATTTGCAGCAGAGGTTTTTCATGGCTTGCAAGAGCAAGTAACGACTACAGCATCTAGAAGCCATAAGCTGATGGTTCGCGTTCAACACATGGAAGCTGCACTTCCTCCCCTTGAGAAGGCTGTACTTGCTCAAACAAGCCACATACATTTTGCATACACAGCTGGTTTAGAGTGGCATCCACGTATTCGAAGTGAAAGACATCATTTCATCTACAATGACTTGCCACGCTTTATCATGGATTCATATGAAGAATGTAGCGATCCTCCGCGTTTGCACTTGCTTGACAAATTTGATACTGGGGGTCCAGGATCTTGTTTAAAGAGATATTCAGATCCAACATTTTTCAAAAGAGCATCAGTTATCTCTGATGAAGCAAATGCTGAAAAAATCCAAAGAGATAGGAAGGCTCAAAGAAGCAAGAAAAAGAAAGGATCACAGCCTAATGGAGATGTATCACGTTCTGCATCGATATCCAATCGCAGTAGCAGAATGCAACCGATTTCTTCTAATGTGAATCGGCAAAGCTCGCCTTCGCAAACTGTCTCCACAACTGACATGGCGGCATTAAAGTCTGACCTGGGAAACAATTCTAATTCTTTTGGTTCAAGAACTGAGTCAGGATATAATGAGGATGTTGCCCATTCAAGTTCCTCCCTGCAAGCCAAACAACAAGAATACAAGGAGTCCCCTACATCTGAATCTGTGCATCATGATGATACTCTTGAATCTGTTCTGCATGATGGTGAAACTGTGTTTGTAGATGGTAACTCTCCTGGAAGTTCATTACAGGACCAAGTTACCTCTGGTTCATCTTGTGGTAAATGGGATGAGAAGGCAGAAATAGTAGATCCTACAGGTCAACAGAAGTGTTTAGATGAAACTACAGAAACGCTCCCTACAATGGATGACTCGGATGCACATGAAGGGGGAGCTGGTCACATTAAGAGTATTCAGCAAAACGATTTCCTCTTTGATGGCGAAAATATTTTGGAGCCAACCTCGAGCAGGAACCAAATTGATGAAGTTGAAAGTGAACCAGATGAACCAGATACTTTCATGGATGCACTTAACACCATTGAATCAGAATCCGAAAATGATCTTGATTGTCAAACAAAACGAGAAGTGAAACATGTCCCTACTTTTGTCAACAAGAAAGGACTGGATACAGTGCATGATATTACCATGGATTGTTTGAATCCTCAAACTCCAAGGTTTGAAACTCATACTGCAACATCTCACAGTTCCCCGGAAAGAGAAACGCCGGTGGATCTACCAAACTCAGCATCATTAGAGAGCCCTGTCCCTGAGCAGACCCTTCAAGTAGTTATGGAACCTTCTAATTCAAACCACTCTGTCGGCTCTGATAGAACTGAAAATCTTGATGATTCAAGGTTAGAAACTGTTAATTGTGATTCAGCATCCTCTGCCTCTGGAACTACCAATGTGCAGGATAACATCATAAGCAGTTTACGTGAACCTCAAGACTCTCCTGCTGACATTTCCAGGAATAATTCAATAAATTTCTGGACTAATGGTGGCATGTTAGGACTTGAGCCTTCAAAACCTCCTGATTTCACCATGGCAAGTCCTGTAAATCCGGCTAGCAGTAGTACAGCTGAGACAATTGGTCTCTCAAATCATGCTTACAAGATTATAGTCGATAAGCATGAAATGGAACCAAGCATGTTGACTATGGATGATCGATGTAATGATAAAGGTCAAGAGGATGGTATCTCATCAGAGAAAATATCTAAGGGAGTTTCACCTACGGAATTGTATACAAAGCTTGGAAATATTAAGGATTCTGACAAGAGCAATGGATTTGGCCATGCCATGGAGGATGGTTGGAAAAAAACCAACGCAATGGAACCTGGAACTGTGTTACCAGTTGCTCCATATACTAAATCTGCTTCCAATGACTTAAATCAGGAGAATGATGAAAACGCTTCTCTAGTTTTCGGACTTGGTCGTAGGTTACTTGAGAATGGTTTTGGTAGAAATGTATCGTATGAAAAATTTGAGCCTGCTAGTTATTTGAATGCGGGTGAATTGGAGCAGAAAGGCGAGCACCAGAGTGCAGTGTACCAATCATTTCCTGATACAGCCTTCAAAGAGCAGTCTGAAGATGGATTTGCAGTTCATTCATCTCCTTCTTCACCACCACTTGAGCACATGAAGATATCTTTCCAACCCATAAATGGCATTGAAACTTCCATACTAAAACTGAAATTATCTGATGGGAATCAAAGCCATGGAAGTGTAAGAGACACGTTTCAGTCATTCCAGCTGATCCCAGAACCTGCTATCCCTCTGCATGAATTTGGTTCTGATTCTGACGACGACACCTTCTGTCGATCATCTCCTTACATATCCGATGATTGTGTTAGCCATCACTCTGAGTCCAATTCTGAACAATGGGAGTCTAGTGAAACTCCGGAGAGAGACAACCATGAACTTTATGATGCCTTGCGTGGAATCTCATCAGCGGAACACATTTCCAGCTCCCCAGAACTAGGGGAAATAGGCAGCAATGCCATTTATAGTGAAGGTGGAATCAAAAGTGTTCACTCTGAGAATGGTATGGTACAGTATCTCTCTGATCCTTTTCTTGATCTTCCAAGCTTAGATGCTTTTAAACCTGTACTCCTGCAAGAACCAAAAGATGATTCTACACCAATGGATGTCCATGGTTTGAGATGTCCTGGGGAATCTACACCAGGACCACCACCTCTCCCTCCAGTGGAATGGTGCCTTTCAAAGCCTCAGTTAGATGGTACAGAAGAAAATCACGATGTATCTGAAGGTTTTAAACATGTACTTGATACAGACCTCTTGGCGTCTATCACCTTCCAGCAACCACCATTGAAGCAACAAGAAGTGAATGAAGAGCCTCTTTCTATTAAACCAAAAATCAAGAACCAGCAGGTGAATGAACACAAAGAAGCTGATCAGACTCTAAACAGCAAAGAGATAGACGAAAAGGACGATTTCTTACAACAAATCAGAACACAGGTCAGTCTGCCATCTCTATTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003779 GO:0003785 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010638 GO:0016020 GO:0016043 GO:0030832 GO:0030833 GO:0030838 GO:0031209 GO:0031334 GO:0032271 GO:0032273 GO:0032535 GO:0032956 GO:0032970 GO:0032991 GO:0033043 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0044087 GO:0044089 GO:0044424 GO:0044444 GO:0044464 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051125 GO:0051127 GO:0051128 GO:0051130 GO:0051493 GO:0051495 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0090066 GO:0110053 GO:1902903 GO:1902905

KEGG Pathways

Metabolic & Signaling

ko00620 ko00680 ko00710 ko00720 ko01100 ko01120 ko01200 map00620 map00680 map00710 map00720 map01100 map01120 map01200

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1064

Amino Acids

117.11

Weight (kDa)

4.72

Isoelectric Point (pI)

51.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004470)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29170 AT1G29170 AT1G29170 AT2G34150 AT2G34150 AT2G34150 AT2G34150 AT2G34150
fragaria_vesca	FvH4_3g07780 FvH4_3g07780 FvH4_3g07780 FvH4_3g07780
malus_domestica	MD00G1207000.v1.1 MD05G1300900.v1.1 MD05G1301000.v1.1 MD10G1279900.v1.1
prunus_persica	Prupe.4G061600_v2.0.a1 Prupe.4G061600_v2.0.a1
pyrus_communis	pycom05g27880 pycom10g23370
rosa_chinensis	RchiOBHm_Chr5g0010801
rosa_laevigata	RLG00000031781
rosa_multiflora	Rmu_sc0000109.1_g000018
rosa_roxburghii	Rroxscaffold_1G00065580
rosa_rugosa	Rorug04G0452600 Rorug04G0452700
rosa_samantha	Rh5AG084800 Rh5BG079600 Rh5CG092300 Rh5DG079700
rosa_wichuraiana	Rw0G000540 Rw0G022250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3070
Acc36I	ACCTGC	2 cut(s)	2464, 3070
AccB1I	GGYRCC	1 cut(s)	2904
AccB7I	CCANNNNNTGG	1 cut(s)	1990
AccI	GTMKAC	1 cut(s)	1934
AccII	CGCG	2 cut(s)	234, 424
AccIII	TCCGGA	1 cut(s)	2590
AciI	CCGC	4 cut(s)	422, 716, 2198, 2642
AcoI	YGGCCR	1 cut(s)	1981
AcsI	RAATTY	5 cut(s)	155, 443, 1675, 2171, 2474
AcuI	CTGAAG	2 cut(s)	2298, 2976
AcyI	GRCGYC	1 cut(s)	2993
AfaI	GTAC	8 cut(s)	59, 279, 1768, 2240, 2742, 2799, 2932, 2973
AfiI	CCNNNNNNNGG	8 cut(s)	142, 271, 1057, 1161, 1990, 2354, 2669, 2896
AflIII	ACRYGT	3 cut(s)	1285, 2424, 2968
AhdI	GACNNNNNGTC	1 cut(s)	1782
AjnI	CCWGG	7 cut(s)	460, 732, 928, 1658, 2026, 2857, 2872
AjuI	GAANNNNNNNTTGG	2 cut(s)	2806, 2838
AleI	CACNNNNGTG	1 cut(s)	2229
AloI	GAACNNNNNNTCC	4 cut(s)	2277, 2309, 2445, 2477
Alw21I	GWGCWC	3 cut(s)	96, 2226, 2328
Alw26I	GTCTC	5 cut(s)	703, 1769, 1790, 2415, 2592
AlwNI	CAGNNNCTG	1 cut(s)	2456
Ama87I	CYCGRG	1 cut(s)	1156
Aor13HI	TCCGGA	1 cut(s)	2590
AoxI	GGCC	3 cut(s)	87, 115, 1981
ApeKI	GCWGC	3 cut(s)	161, 251, 2682
ApoI	RAATTY	5 cut(s)	155, 443, 1675, 2171, 2474
Asp700I	GAANNNNTTC	2 cut(s)	742, 885
AspLEI	GCGC	1 cut(s)	135
AspS9I	GGNCC	3 cut(s)	458, 946, 2876
AsuC2I	CCSGG	1 cut(s)	1403
AsuHPI	GGTGA	9 cut(s)	22, 34, 911, 1723, 1911, 2213, 2304, 2992, 3094
AsuII	TTCGAA	1 cut(s)	343
AsuNHI	GCTAGC	1 cut(s)	1757
AvaI	CYCGRG	1 cut(s)	1156
AvaII	GGWCC	3 cut(s)	458, 946, 2876
BalI	TGGCCA	1 cut(s)	1983
BanI	GGYRCC	1 cut(s)	2904
BanII	GRGCYC	1 cut(s)	1454
Bbv12I	GWGCWC	3 cut(s)	96, 2226, 2328
BbvCI	CCTCAGC	1 cut(s)	51
BbvI	GCAGC	3 cut(s)	173, 238, 2694
BceAI	ACGGC	2 cut(s)	74, 92
BcgI	CGANNNNNNTGC	2 cut(s)	86, 120
BciT130I	CCWGG	7 cut(s)	462, 734, 930, 1660, 2028, 2859, 2874
BciVI	GTATCC	1 cut(s)	1312
BclI	TGATCA	1 cut(s)	3103
BcnI	CCSGG	1 cut(s)	1403
BcoDI	GTCTC	5 cut(s)	703, 1769, 1790, 2415, 2592
BfaI	CTAG	6 cut(s)	210, 1758, 2108, 2184, 2580, 2669
BfmI	CTRYAG	3 cut(s)	201, 1008, 1038
BfuAI	ACCTGC	2 cut(s)	2464, 3070
BfuI	GTATCC	1 cut(s)	1312
BisI	GCNGC	4 cut(s)	162, 252, 717, 2683
BlsI	GCNGC	4 cut(s)	163, 253, 718, 2684
Bme1390I	CCNGG	8 cut(s)	462, 734, 930, 1403, 1660, 2028, 2859, 2874
Bme18I	GGWCC	3 cut(s)	458, 946, 2876
BmeRI	GACNNNNNGTC	1 cut(s)	1782
BmeT110I	CYCGRG	1 cut(s)	1156
BmgT120I	GGNCC	3 cut(s)	458, 946, 2876
BmiI	GGNNCC	7 cut(s)	459, 1149, 1166, 1488, 1833, 2025, 2906
BmrFI	CCNGG	8 cut(s)	462, 734, 930, 1403, 1660, 2028, 2859, 2874
BmrI	ACTGGG	1 cut(s)	462
BmtI	GCTAGC	1 cut(s)	1761
BmuI	ACTGGG	1 cut(s)	462
BplI	GAGNNNNNCTC	2 cut(s)	1139, 1171
BpmI	CTGGAG	1 cut(s)	2877
Bpu10I	CCTNAGC	2 cut(s)	51, 1461
Bpu14I	TTCGAA	1 cut(s)	343
BpuEI	CTTGAG	5 cut(s)	287, 1620, 1727, 2156, 2342
BpuMI	CCSGG	1 cut(s)	1403
Bsa29I	ATCGAT	2 cut(s)	623, 1858
BsaAI	YACGTR	2 cut(s)	338, 1628
BsaBI	GATNNNNATC	1 cut(s)	2397
BsaHI	GRCGYC	1 cut(s)	2993
BsaI	GGTCTC	1 cut(s)	1790
BsaWI	WCCGGW	1 cut(s)	2590
BsaXI	ACNNNNNCTCC	4 cut(s)	2784, 2814, 2871, 2901
Bsc4I	CCNNNNNNNGG	8 cut(s)	142, 271, 1057, 1161, 1990, 2354, 2669, 2896
Bse118I	RCCGGY	2 cut(s)	113, 1417
Bse1I	ACTGG	4 cut(s)	457, 1320, 2042, 2894
Bse3DI	GCAATG	3 cut(s)	1978, 2025, 2692
Bse8I	GATNNNNATC	1 cut(s)	2397
BseAI	TCCGGA	1 cut(s)	2590
BseBI	CCWGG	7 cut(s)	462, 734, 930, 1660, 2028, 2859, 2874
BseCI	ATCGAT	2 cut(s)	623, 1858
BseJI	GATNNNNATC	1 cut(s)	2397
BseLI	CCNNNNNNNGG	8 cut(s)	142, 271, 1057, 1161, 1990, 2354, 2669, 2896
BseMI	GCAATG	3 cut(s)	1978, 2025, 2692
BseMII	CTCAG	8 cut(s)	65, 759, 1449, 1452, 1764, 2544, 2718, 2933
BseNI	ACTGG	4 cut(s)	457, 1320, 2042, 2894
BseXI	GCAGC	3 cut(s)	173, 238, 2694
BsgI	GTGCAG	3 cut(s)	237, 1622, 2253
Bsh1236I	CGCG	2 cut(s)	234, 424
BshFI	GGCC	3 cut(s)	89, 117, 1983
BshNI	GGYRCC	1 cut(s)	2904
BshVI	ATCGAT	2 cut(s)	623, 1858
BsiHKAI	GWGCWC	3 cut(s)	96, 2226, 2328
BsiHKCI	CYCGRG	1 cut(s)	1156
BsiSI	CCGG	5 cut(s)	114, 1403, 1418, 1754, 2591
BslFI	GGGAC	3 cut(s)	826, 1274, 1442
BslI	CCNNNNNNNGG	8 cut(s)	142, 271, 1057, 1161, 1990, 2354, 2669, 2896
BsmAI	GTCTC	5 cut(s)	703, 1769, 1790, 2415, 2592
BsmFI	GGGAC	3 cut(s)	826, 1274, 1442
BsmI	GAATGC	2 cut(s)	651, 2200
BsnI	GGCC	3 cut(s)	89, 117, 1983
Bso31I	GGTCTC	1 cut(s)	1790
BsoBI	CYCGRG	1 cut(s)	1156
Bsp119I	TTCGAA	1 cut(s)	343
Bsp1286I	GDGCHC	4 cut(s)	96, 1454, 2226, 2328
Bsp13I	TCCGGA	1 cut(s)	2590
Bsp1407I	TGTACA	1 cut(s)	57
Bsp19I	CCATGG	5 cut(s)	1338, 1734, 1989, 2407, 2842
BspACI	CCGC	4 cut(s)	422, 716, 2198, 2642
BspANI	GGCC	3 cut(s)	89, 117, 1983
BspCNI	CTCAG	8 cut(s)	64, 760, 1448, 1453, 1765, 2545, 2719, 2932
BspDI	ATCGAT	2 cut(s)	623, 1858
BspEI	TCCGGA	1 cut(s)	2590
BspFNI	CGCG	2 cut(s)	234, 424
BspHI	TCATGA	1 cut(s)	865
BspLI	GGNNCC	7 cut(s)	459, 1149, 1166, 1488, 1833, 2025, 2906
BspMI	ACCTGC	2 cut(s)	2464, 3070
BspOI	GCTAGC	1 cut(s)	1761
BspQI	GCTCTTC	1 cut(s)	3036
BspT104I	TTCGAA	1 cut(s)	343
BspT107I	GGYRCC	1 cut(s)	2904
BspTNI	GGTCTC	1 cut(s)	1790
BsrDI	GCAATG	3 cut(s)	1978, 2025, 2692
BsrFI	RCCGGY	2 cut(s)	113, 1417
BsrGI	TGTACA	1 cut(s)	57
BsrI	ACTGG	4 cut(s)	457, 1320, 2042, 2894
BssAI	RCCGGY	2 cut(s)	113, 1417
BssNAI	GTATAC	1 cut(s)	1935
BssNI	GRCGYC	1 cut(s)	2993
BssT1I	CCWWGG	7 cut(s)	84, 1338, 1364, 1734, 1989, 2407, 2842
Bst1107I	GTATAC	1 cut(s)	1935
Bst2UI	CCWGG	7 cut(s)	462, 734, 930, 1660, 2028, 2859, 2874
Bst4CI	ACNGT	8 cut(s)	101, 697, 907, 1324, 1397, 1558, 2035, 2745
Bst6I	CTCTTC	1 cut(s)	3036
BstACI	GRCGYC	1 cut(s)	2993
BstAPI	GCANNNNNTGC	1 cut(s)	1580
BstAUI	TGTACA	1 cut(s)	57
BstBAI	YACGTR	2 cut(s)	338, 1628
BstBI	TTCGAA	1 cut(s)	343
BstC8I	GCNNGC	7 cut(s)	115, 182, 683, 816, 1759, 2181, 2222
BstDSI	CCRYGG	5 cut(s)	1338, 1734, 1989, 2407, 2842
BstENI	CCTNNNNNAGG	2 cut(s)	269, 1159
BstFNI	CGCG	2 cut(s)	234, 424
BstHHI	GCGC	1 cut(s)	135
BstMAI	GTCTC	5 cut(s)	703, 1769, 1790, 2415, 2592
BstMWI	GCNNNNNNNGC	5 cut(s)	158, 281, 314, 682, 1580
BstNI	CCWGG	7 cut(s)	462, 734, 930, 1660, 2028, 2859, 2874
BstNSI	RCATGY	4 cut(s)	1289, 1699, 1843, 2972
BstSCI	CCNGG	8 cut(s)	460, 732, 928, 1401, 1658, 2026, 2857, 2872
BstSFI	CTRYAG	3 cut(s)	201, 1008, 1038
BstUI	CGCG	2 cut(s)	234, 424
BstV1I	GCAGC	3 cut(s)	173, 238, 2694
BstX2I	RGATCY	7 cut(s)	79, 126, 145, 464, 487, 1003, 1423
BstXI	CCANNNNNNTGG	2 cut(s)	2020, 2901
BstYI	RGATCY	7 cut(s)	79, 126, 145, 464, 487, 1003, 1423
BstZ17I	GTATAC	1 cut(s)	1935
Bsu15I	ATCGAT	2 cut(s)	623, 1858
BsuI	GTATCC	1 cut(s)	1312
BsuRI	GGCC	3 cut(s)	89, 117, 1983
BsuTUI	ATCGAT	2 cut(s)	623, 1858
BtgI	CCRYGG	5 cut(s)	1338, 1734, 1989, 2407, 2842
BtsI	GCAGTG	1 cut(s)	2241
BtsIMutI	CAGTG	3 cut(s)	1329, 2241, 2901
BveI	ACCTGC	2 cut(s)	2464, 3070
Cac8I	GCNNGC	7 cut(s)	115, 182, 683, 816, 1759, 2181, 2222
CaiI	CAGNNNCTG	1 cut(s)	2456
CciI	TCATGA	1 cut(s)	865
CfoI	GCGC	1 cut(s)	135
Cfr10I	RCCGGY	2 cut(s)	113, 1417
Cfr13I	GGNCC	3 cut(s)	458, 946, 2876
ClaI	ATCGAT	2 cut(s)	623, 1858
CseI	GACGC	1 cut(s)	2982
Csp6I	GTAC	8 cut(s)	58, 278, 1767, 2239, 2741, 2798, 2931, 2972
CviQI	GTAC	8 cut(s)	58, 278, 1767, 2239, 2741, 2798, 2931, 2972
DraI	TTTAAA	3 cut(s)	474, 2791, 2965
DriI	GACNNNNNGTC	1 cut(s)	1782
EaeI	YGGCCR	1 cut(s)	1981
Eam1104I	CTCTTC	1 cut(s)	3036
Eam1105I	GACNNNNNGTC	1 cut(s)	1782
EarI	CTCTTC	1 cut(s)	3036
Eco130I	CCWWGG	7 cut(s)	84, 1338, 1364, 1734, 1989, 2407, 2842
Eco24I	GRGCYC	1 cut(s)	1454
Eco31I	GGTCTC	1 cut(s)	1790
Eco32I	GATATC	2 cut(s)	627, 2337
Eco47I	GGWCC	3 cut(s)	458, 946, 2876
Eco57I	CTGAAG	2 cut(s)	2298, 2976
Eco88I	CYCGRG	1 cut(s)	1156
EcoNI	CCTNNNNNAGG	2 cut(s)	269, 1159
EcoRII	CCWGG	7 cut(s)	460, 732, 928, 1658, 2026, 2857, 2872
EcoRV	GATATC	2 cut(s)	627, 2337
EcoT14I	CCWWGG	7 cut(s)	84, 1338, 1364, 1734, 1989, 2407, 2842
EcoT38I	GRGCYC	1 cut(s)	1454
ErhI	CCWWGG	7 cut(s)	84, 1338, 1364, 1734, 1989, 2407, 2842
FalI	AAGNNNNNCTT	6 cut(s)	240, 272, 670, 702, 3033, 3065
FaqI	GGGAC	3 cut(s)	826, 1274, 1442
FauI	CCCGC	1 cut(s)	2191
FauNDI	CATATG	1 cut(s)	400
FbaI	TGATCA	1 cut(s)	3103
FblI	GTMKAC	1 cut(s)	1934
Fnu4HI	GCNGC	4 cut(s)	162, 252, 717, 2683
FriOI	GRGCYC	1 cut(s)	1454
Fsp4HI	GCNGC	4 cut(s)	162, 252, 717, 2683
FspBI	CTAG	6 cut(s)	210, 1758, 2108, 2184, 2580, 2669
GlaI	GCGC	1 cut(s)	134
GluI	GCNGC	4 cut(s)	162, 252, 717, 2683
GsuI	CTGGAG	1 cut(s)	2877
HaeIII	GGCC	3 cut(s)	89, 117, 1983
HapII	CCGG	5 cut(s)	114, 1403, 1418, 1754, 2591
HgaI	GACGC	1 cut(s)	2982
HhaI	GCGC	1 cut(s)	135
Hin1I	GRCGYC	1 cut(s)	2993
Hin6I	GCGC	1 cut(s)	133
HinP1I	GCGC	1 cut(s)	133
HincII	GTYRAC	3 cut(s)	1016, 1303, 1845
HindII	GTYRAC	3 cut(s)	1016, 1303, 1845
HindIII	AAGCTT	2 cut(s)	1940, 2776
HpaII	CCGG	5 cut(s)	114, 1403, 1418, 1754, 2591
HphI	GGTGA	9 cut(s)	22, 34, 911, 1723, 1911, 2213, 2304, 2992, 3094
Hpy166II	GTNNAC	9 cut(s)	1016, 1190, 1303, 1625, 1631, 1845, 1935, 2239, 2722
Hpy8I	GTNNAC	9 cut(s)	1016, 1190, 1303, 1625, 1631, 1845, 1935, 2239, 2722
Hpy99I	CGWCG	3 cut(s)	101, 125, 2498
HpyCH4III	ACNGT	8 cut(s)	101, 697, 907, 1324, 1397, 1558, 2035, 2745
HpyCH4IV	ACGT	4 cut(s)	337, 613, 1627, 2426
HpyF10VI	GCNNNNNNNGC	5 cut(s)	158, 281, 314, 682, 1580
HpySE526I	ACGT	4 cut(s)	337, 613, 1627, 2426
Hsp92I	GRCGYC	1 cut(s)	2993
HspAI	GCGC	1 cut(s)	133
Kpn2I	TCCGGA	1 cut(s)	2590
KroI	GCCGGC	1 cut(s)	113
KroNI	GCCGGC	1 cut(s)	115
Ksp22I	TGATCA	1 cut(s)	3103
LguI	GCTCTTC	1 cut(s)	3036
LmnI	GCTCC	6 cut(s)	1053, 1085, 1147, 2053, 2209, 2663
Lsp1109I	GCAGC	3 cut(s)	173, 238, 2694
MaeI	CTAG	6 cut(s)	210, 1758, 2108, 2184, 2580, 2669
MaeII	ACGT	4 cut(s)	337, 613, 1627, 2426
MaeIII	GTNAC	6 cut(s)	193, 920, 952, 1091, 2037, 2130
MboII	GAAGA	9 cut(s)	89, 416, 651, 2291, 2301, 2344, 2762, 2948, 3053
MfeI	CAATTG	2 cut(s)	137, 1779
MflI	RGATCY	7 cut(s)	79, 126, 145, 464, 487, 1003, 1423
MhlI	GDGCHC	4 cut(s)	96, 1454, 2226, 2328
MlsI	TGGCCA	1 cut(s)	1983
MluNI	TGGCCA	1 cut(s)	1983
MlyI	GAGTC	7 cut(s)	779, 848, 1058, 1634, 2564, 2585, 3103
MmeI	TCCRAC	3 cut(s)	515, 1982, 2368
Mox20I	TGGCCA	1 cut(s)	1983
MroI	TCCGGA	1 cut(s)	2590
MroNI	GCCGGC	1 cut(s)	113
MroXI	GAANNNNTTC	2 cut(s)	742, 885
MscI	TGGCCA	1 cut(s)	1983
MslI	CAYNNNNRTG	4 cut(s)	867, 897, 2229, 2412
Msp20I	TGGCCA	1 cut(s)	1983
MspA1I	CMGCKG	5 cut(s)	55, 317, 1772, 2443, 2642
MspI	CCGG	5 cut(s)	114, 1403, 1418, 1754, 2591
MspR9I	CCNGG	8 cut(s)	462, 734, 930, 1403, 1660, 2028, 2859, 2874
MunI	CAATTG	2 cut(s)	137, 1779
Mva1269I	GAATGC	2 cut(s)	651, 2200
MvaI	CCWGG	7 cut(s)	462, 734, 930, 1660, 2028, 2859, 2874
MvnI	CGCG	2 cut(s)	234, 424
MwoI	GCNNNNNNNGC	5 cut(s)	158, 281, 314, 682, 1580
NaeI	GCCGGC	1 cut(s)	115
NciI	CCSGG	1 cut(s)	1403
NcoI	CCATGG	5 cut(s)	1338, 1734, 1989, 2407, 2842
NdeI	CATATG	1 cut(s)	400
NgoMIV	GCCGGC	1 cut(s)	113
NheI	GCTAGC	1 cut(s)	1757
NlaIV	GGNNCC	7 cut(s)	459, 1149, 1166, 1488, 1833, 2025, 2906
NmuCI	GTSAC	1 cut(s)	1091
NspI	RCATGY	4 cut(s)	1289, 1699, 1843, 2972
NspV	TTCGAA	1 cut(s)	343
OliI	CACNNNNGTG	1 cut(s)	2229
PaeR7I	CTCGAG	1 cut(s)	1156
PagI	TCATGA	1 cut(s)	865
PaqCI	CACCTGC	1 cut(s)	3070
PciI	ACATGT	2 cut(s)	1285, 2968
PciSI	GCTCTTC	1 cut(s)	3036
PcsI	WCGNNNNNNNCGW	2 cut(s)	105, 3138
PctI	GAATGC	2 cut(s)	651, 2200
PdiI	GCCGGC	1 cut(s)	115
PdmI	GAANNNNTTC	2 cut(s)	742, 885
PflFI	GACNNNGTC	1 cut(s)	2121
PflMI	CCANNNNNTGG	1 cut(s)	1990
PfoI	TCCNGGA	3 cut(s)	460, 928, 1658
PkrI	GCNGC	4 cut(s)	163, 253, 718, 2684
PleI	GAGTC	7 cut(s)	778, 847, 1058, 1634, 2563, 2584, 3103
PpsI	GAGTC	7 cut(s)	778, 847, 1058, 1634, 2563, 2584, 3103
Ppu21I	YACGTR	2 cut(s)	338, 1628
PscI	ACATGT	2 cut(s)	1285, 2968
Psp6I	CCWGG	7 cut(s)	460, 732, 928, 1658, 2026, 2857, 2872
PspGI	CCWGG	7 cut(s)	460, 732, 928, 1658, 2026, 2857, 2872
PspN4I	GGNNCC	7 cut(s)	459, 1149, 1166, 1488, 1833, 2025, 2906
PspPI	GGNCC	3 cut(s)	458, 946, 2876
PspXI	VCTCGAGB	1 cut(s)	1156
PstNI	CAGNNNCTG	1 cut(s)	2456
PsuI	RGATCY	7 cut(s)	79, 126, 145, 464, 487, 1003, 1423
PsyI	GACNNNGTC	1 cut(s)	2121
PvuII	CAGCTG	4 cut(s)	55, 317, 1772, 2443
RsaI	GTAC	8 cut(s)	59, 279, 1768, 2240, 2742, 2799, 2932, 2973
RsaNI	GTAC	8 cut(s)	58, 278, 1767, 2239, 2741, 2798, 2931, 2972
RseI	CAYNNNNRTG	4 cut(s)	867, 897, 2229, 2412
SapI	GCTCTTC	1 cut(s)	3036
SatI	GCNGC	4 cut(s)	162, 252, 717, 2683
Sau96I	GGNCC	3 cut(s)	458, 946, 2876
SchI	GAGTC	7 cut(s)	779, 848, 1058, 1634, 2564, 2585, 3103
ScrFI	CCNGG	8 cut(s)	462, 734, 930, 1403, 1660, 2028, 2859, 2874
SduI	GDGCHC	4 cut(s)	96, 1454, 2226, 2328
SfcI	CTRYAG	3 cut(s)	201, 1008, 1038
Sfr274I	CTCGAG	1 cut(s)	1156
SfuI	TTCGAA	1 cut(s)	343
SgrAI	CRCCGGYG	1 cut(s)	1417
SinI	GGWCC	3 cut(s)	458, 946, 2876
SlaI	CTCGAG	1 cut(s)	1156
SmiMI	CAYNNNNRTG	4 cut(s)	867, 897, 2229, 2412
SmlI	CTYRAG	6 cut(s)	266, 1156, 1635, 1706, 2135, 2321
SmoI	CTYRAG	6 cut(s)	266, 1156, 1635, 1706, 2135, 2321
SsiI	CCGC	4 cut(s)	422, 716, 2198, 2642
SspI	AATATT	2 cut(s)	1141, 1951
SspMI	CTAG	6 cut(s)	210, 1758, 2108, 2184, 2580, 2669
StyD4I	CCNGG	8 cut(s)	460, 732, 928, 1401, 1658, 2026, 2857, 2872
StyI	CCWWGG	7 cut(s)	84, 1338, 1364, 1734, 1989, 2407, 2842
TaaI	ACNGT	8 cut(s)	101, 697, 907, 1324, 1397, 1558, 2035, 2745
TaiI	ACGT	4 cut(s)	340, 616, 1630, 2429
TaqI	TCGA	7 cut(s)	96, 343, 623, 1157, 1815, 1858, 2509
TatI	WGTACW	5 cut(s)	57, 277, 1766, 2797, 2971
TauI	GCSGC	1 cut(s)	719
TscAI	CASTG	3 cut(s)	1329, 2241, 2901
TseFI	GTSAC	1 cut(s)	1091
TseI	GCWGC	3 cut(s)	161, 251, 2682
Tsp45I	GTSAC	1 cut(s)	1091
TspGWI	ACGGA	1 cut(s)	1940
TspRI	CASTG	3 cut(s)	1329, 2241, 2901
Tth111I	GACNNNGTC	1 cut(s)	2121
Van91I	CCANNNNNTGG	1 cut(s)	1990
VpaK11BI	GGWCC	3 cut(s)	458, 946, 2876
XagI	CCTNNNNNAGG	2 cut(s)	269, 1159
XapI	RAATTY	5 cut(s)	155, 443, 1675, 2171, 2474
XbaI	TCTAGA	1 cut(s)	209
XceI	RCATGY	4 cut(s)	1289, 1699, 1843, 2972
XcmI	CCANNNNNNNNNTGG	3 cut(s)	709, 956, 2351
XhoI	CTCGAG	1 cut(s)	1156
XmiI	GTMKAC	1 cut(s)	1934
XmnI	GAANNNNTTC	2 cut(s)	742, 885
XspI	CTAG	6 cut(s)	210, 1758, 2108, 2184, 2580, 2669

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.