Nuclear transcription factor Y subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30500 AT1G30500 |
| fragaria_vesca | FvH4_3g10080 FvH4_3g10080 |
| malus_domestica | MD05G1273300.v1.1 MD10G1253300.v1.1 |
| prunus_persica | Prupe.4G090200_v2.0.a1 Prupe.4G090200_v2.0.a1 |
| pyrus_communis | pycom05g25500 pycom10g20900 |
| rosa_chinensis | RchiOBHm_Chr5g0015971 |
| rosa_laevigata | RLG00000032233 |
| rosa_multiflora | Rmu_sc0000299.1_g000027 Rmu_sc0001878.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00060650 |
| rosa_rugosa | Rorug05G0030600 Rorug05G0030700 Rorug05G0030700 |
| rosa_samantha | Rh5AG124000 Rh5BG122900 Rh5CG134300 Rh5DG122300 |
| rosa_wichuraiana | Rw5G010710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 370 |
| AccB1I | GGYRCC | 1 cut(s) | 157 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 137 |
| AcsI | RAATTY | 1 cut(s) | 96 |
| AcuI | CTGAAG | 1 cut(s) | 251 |
| AcyI | GRCGYC | 1 cut(s) | 367 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 77, 137, 245, 246 |
| AflII | CTTAAG | 1 cut(s) | 410 |
| AgeI | ACCGGT | 1 cut(s) | 325 |
| AjnI | CCWGG | 1 cut(s) | 91 |
| AluBI | AGCT | 4 cut(s) | 167, 407, 467, 583 |
| AluI | AGCT | 4 cut(s) | 167, 407, 467, 583 |
| Alw26I | GTCTC | 2 cut(s) | 381, 420 |
| ApeKI | GCWGC | 2 cut(s) | 122, 164 |
| ApoI | RAATTY | 1 cut(s) | 96 |
| AsiGI | ACCGGT | 1 cut(s) | 325 |
| AspS9I | GGNCC | 1 cut(s) | 259 |
| AvaII | GGWCC | 1 cut(s) | 259 |
| BanI | GGYRCC | 1 cut(s) | 157 |
| BauI | CACGAG | 1 cut(s) | 378 |
| BbvI | GCAGC | 2 cut(s) | 134, 176 |
| BccI | CCATC | 3 cut(s) | 270, 313, 590 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 422, 456 |
| BciT130I | CCWGG | 1 cut(s) | 93 |
| BcoDI | GTCTC | 2 cut(s) | 381, 420 |
| BfaI | CTAG | 1 cut(s) | 468 |
| BfmI | CTRYAG | 1 cut(s) | 190 |
| BfrI | CTTAAG | 1 cut(s) | 410 |
| BisI | GCNGC | 2 cut(s) | 123, 165 |
| BlsI | GCNGC | 2 cut(s) | 124, 166 |
| Bme1390I | CCNGG | 1 cut(s) | 93 |
| Bme18I | GGWCC | 1 cut(s) | 259 |
| BmgT120I | GGNCC | 1 cut(s) | 259 |
| BmiI | GGNNCC | 2 cut(s) | 159, 324 |
| BmrFI | CCNGG | 1 cut(s) | 93 |
| BmsI | GCATC | 3 cut(s) | 207, 301, 366 |
| BsaHI | GRCGYC | 1 cut(s) | 367 |
| BsaWI | WCCGGW | 1 cut(s) | 325 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 77, 137, 245, 246 |
| Bse118I | RCCGGY | 1 cut(s) | 325 |
| Bse3DI | GCAATG | 1 cut(s) | 299 |
| BseBI | CCWGG | 1 cut(s) | 93 |
| BseGI | GGATG | 4 cut(s) | 88, 479, 526, 602 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 77, 137, 245, 246 |
| BseMI | GCAATG | 1 cut(s) | 299 |
| BseMII | CTCAG | 2 cut(s) | 449, 606 |
| BseXI | GCAGC | 2 cut(s) | 134, 176 |
| BseYI | CCCAGC | 1 cut(s) | 546 |
| BshNI | GGYRCC | 1 cut(s) | 157 |
| BshTI | ACCGGT | 1 cut(s) | 325 |
| BsiSI | CCGG | 1 cut(s) | 326 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 77, 137, 245, 246 |
| BsmAI | GTCTC | 2 cut(s) | 381, 420 |
| Bsp143I | GATC | 1 cut(s) | 19 |
| BspCNI | CTCAG | 2 cut(s) | 450, 605 |
| BspLI | GGNNCC | 2 cut(s) | 159, 324 |
| BspQI | GCTCTTC | 1 cut(s) | 457 |
| BspT107I | GGYRCC | 1 cut(s) | 157 |
| BspTI | CTTAAG | 1 cut(s) | 410 |
| BsrDI | GCAATG | 1 cut(s) | 299 |
| BsrFI | RCCGGY | 1 cut(s) | 325 |
| BssAI | RCCGGY | 1 cut(s) | 325 |
| BssMI | GATC | 1 cut(s) | 19 |
| BssNI | GRCGYC | 1 cut(s) | 367 |
| BssSI | CACGAG | 1 cut(s) | 378 |
| Bst2BI | CACGAG | 1 cut(s) | 378 |
| Bst2UI | CCWGG | 1 cut(s) | 93 |
| Bst4CI | ACNGT | 1 cut(s) | 259 |
| Bst6I | CTCTTC | 1 cut(s) | 457 |
| BstACI | GRCGYC | 1 cut(s) | 367 |
| BstAFI | CTTAAG | 1 cut(s) | 410 |
| BstC8I | GCNNGC | 4 cut(s) | 72, 288, 453, 585 |
| BstDEI | CTNAG | 2 cut(s) | 458, 592 |
| BstF5I | GGATG | 4 cut(s) | 88, 479, 526, 602 |
| BstKTI | GATC | 1 cut(s) | 22 |
| BstMAI | GTCTC | 2 cut(s) | 381, 420 |
| BstMBI | GATC | 1 cut(s) | 19 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 164, 370, 430 |
| BstNI | CCWGG | 1 cut(s) | 93 |
| BstNSI | RCATGY | 2 cut(s) | 152, 455 |
| BstSCI | CCNGG | 1 cut(s) | 91 |
| BstSFI | CTRYAG | 1 cut(s) | 190 |
| BstV1I | GCAGC | 2 cut(s) | 134, 176 |
| BtsCI | GGATG | 4 cut(s) | 88, 479, 526, 602 |
| BtsI | GCAGTG | 1 cut(s) | 159 |
| BtsIMutI | CAGTG | 2 cut(s) | 159, 455 |
| Cac8I | GCNNGC | 4 cut(s) | 72, 288, 453, 585 |
| Cfr10I | RCCGGY | 1 cut(s) | 325 |
| Cfr13I | GGNCC | 1 cut(s) | 259 |
| CspAI | ACCGGT | 1 cut(s) | 325 |
| CviAII | CATG | 5 cut(s) | 17, 149, 353, 434, 452 |
| CviJI | RGCY | 8 cut(s) | 125, 167, 238, 407, 424, 467, 550, 583 |
| CviKI_1 | RGCY | 8 cut(s) | 125, 167, 238, 407, 424, 467, 550, 583 |
| DdeI | CTNAG | 2 cut(s) | 458, 592 |
| DpnI | GATC | 1 cut(s) | 21 |
| DpnII | GATC | 1 cut(s) | 19 |
| DraI | TTTAAA | 1 cut(s) | 564 |
| Eam1104I | CTCTTC | 1 cut(s) | 457 |
| EarI | CTCTTC | 1 cut(s) | 457 |
| Eco47I | GGWCC | 1 cut(s) | 259 |
| Eco57I | CTGAAG | 1 cut(s) | 251 |
| EcoRI | GAATTC | 1 cut(s) | 96 |
| EcoRII | CCWGG | 1 cut(s) | 91 |
| FaeI | CATG | 5 cut(s) | 20, 152, 356, 437, 455 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 46, 78, 413, 445 |
| FatI | CATG | 5 cut(s) | 16, 148, 352, 433, 451 |
| Fnu4HI | GCNGC | 2 cut(s) | 123, 165 |
| FokI | GGATG | 4 cut(s) | 75, 486, 533, 589 |
| Fsp4HI | GCNGC | 2 cut(s) | 123, 165 |
| FspBI | CTAG | 1 cut(s) | 468 |
| GluI | GCNGC | 2 cut(s) | 123, 165 |
| GsaI | CCCAGC | 1 cut(s) | 550 |
| HapII | CCGG | 1 cut(s) | 326 |
| Hin1I | GRCGYC | 1 cut(s) | 367 |
| Hin1II | CATG | 5 cut(s) | 20, 152, 356, 437, 455 |
| HinfI | GANTC | 4 cut(s) | 38, 279, 392, 437 |
| HpaII | CCGG | 1 cut(s) | 326 |
| Hpy166II | GTNNAC | 1 cut(s) | 337 |
| Hpy188I | TCNGA | 6 cut(s) | 28, 43, 310, 397, 571, 595 |
| Hpy188III | TCNNGA | 4 cut(s) | 179, 417, 441, 606 |
| Hpy8I | GTNNAC | 1 cut(s) | 337 |
| Hpy99I | CGWCG | 2 cut(s) | 369, 372 |
| HpyCH4III | ACNGT | 1 cut(s) | 259 |
| HpyCH4IV | ACGT | 1 cut(s) | 367 |
| HpyCH4V | TGCA | 8 cut(s) | 16, 74, 122, 152, 314, 433, 455, 497 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 164, 370, 430 |
| HpyF3I | CTNAG | 2 cut(s) | 458, 592 |
| HpySE526I | ACGT | 1 cut(s) | 367 |
| Hsp92I | GRCGYC | 1 cut(s) | 367 |
| Hsp92II | CATG | 5 cut(s) | 20, 152, 356, 437, 455 |
| Kzo9I | GATC | 1 cut(s) | 19 |
| LguI | GCTCTTC | 1 cut(s) | 457 |
| LmnI | GCTCC | 1 cut(s) | 211 |
| Lsp1109I | GCAGC | 2 cut(s) | 134, 176 |
| LweI | GCATC | 3 cut(s) | 207, 301, 366 |
| MaeI | CTAG | 1 cut(s) | 468 |
| MaeII | ACGT | 1 cut(s) | 367 |
| MalI | GATC | 1 cut(s) | 21 |
| MboI | GATC | 1 cut(s) | 19 |
| MboII | GAAGA | 3 cut(s) | 54, 257, 474 |
| MfeI | CAATTG | 1 cut(s) | 75 |
| MluCI | AATT | 3 cut(s) | 75, 96, 559 |
| MmeI | TCCRAC | 2 cut(s) | 118, 125 |
| MnlI | CCTC | 5 cut(s) | 138, 240, 313, 464, 601 |
| MseI | TTAA | 4 cut(s) | 272, 411, 492, 563 |
| MslI | CAYNNNNRTG | 1 cut(s) | 450 |
| MspCI | CTTAAG | 1 cut(s) | 410 |
| MspI | CCGG | 1 cut(s) | 326 |
| MspR9I | CCNGG | 1 cut(s) | 93 |
| MunI | CAATTG | 1 cut(s) | 75 |
| MvaI | CCWGG | 1 cut(s) | 93 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 164, 370, 430 |
| NdeII | GATC | 1 cut(s) | 19 |
| NlaIII | CATG | 5 cut(s) | 20, 152, 356, 437, 455 |
| NlaIV | GGNNCC | 2 cut(s) | 159, 324 |
| NspI | RCATGY | 2 cut(s) | 152, 455 |
| PaeI | GCATGC | 1 cut(s) | 455 |
| PciSI | GCTCTTC | 1 cut(s) | 457 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 376 |
| PfeI | GAWTC | 4 cut(s) | 38, 279, 392, 437 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 137 |
| PfoI | TCCNGGA | 1 cut(s) | 91 |
| PinAI | ACCGGT | 1 cut(s) | 325 |
| PkrI | GCNGC | 2 cut(s) | 124, 166 |
| Psp6I | CCWGG | 1 cut(s) | 91 |
| PspFI | CCCAGC | 1 cut(s) | 546 |
| PspGI | CCWGG | 1 cut(s) | 91 |
| PspN4I | GGNNCC | 2 cut(s) | 159, 324 |
| PspPI | GGNCC | 1 cut(s) | 259 |
| RseI | CAYNNNNRTG | 1 cut(s) | 450 |
| SapI | GCTCTTC | 1 cut(s) | 457 |
| SaqAI | TTAA | 4 cut(s) | 272, 411, 492, 563 |
| SatI | GCNGC | 2 cut(s) | 123, 165 |
| Sau3AI | GATC | 1 cut(s) | 19 |
| Sau96I | GGNCC | 1 cut(s) | 259 |
| ScrFI | CCNGG | 1 cut(s) | 93 |
| SetI | ASST | 5 cut(s) | 169, 370, 409, 469, 585 |
| SfaNI | GCATC | 3 cut(s) | 207, 301, 366 |
| SfcI | CTRYAG | 1 cut(s) | 190 |
| SinI | GGWCC | 1 cut(s) | 259 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 450 |
| SmlI | CTYRAG | 1 cut(s) | 410 |
| SmoI | CTYRAG | 1 cut(s) | 410 |
| SphI | GCATGC | 1 cut(s) | 455 |
| Sse9I | AATT | 3 cut(s) | 75, 96, 559 |
| SspI | AATATT | 1 cut(s) | 112 |
| SspMI | CTAG | 1 cut(s) | 468 |
| StyD4I | CCNGG | 1 cut(s) | 91 |
| TaaI | ACNGT | 1 cut(s) | 259 |
| TaiI | ACGT | 1 cut(s) | 370 |
| TaqI | TCGA | 3 cut(s) | 418, 442, 484 |
| TasI | AATT | 3 cut(s) | 75, 96, 559 |
| TfiI | GAWTC | 4 cut(s) | 38, 279, 392, 437 |
| Tru1I | TTAA | 4 cut(s) | 272, 411, 492, 563 |
| Tru9I | TTAA | 4 cut(s) | 272, 411, 492, 563 |
| TscAI | CASTG | 2 cut(s) | 159, 462 |
| TseI | GCWGC | 2 cut(s) | 122, 164 |
| TspDTI | ATGAA | 2 cut(s) | 450, 537 |
| TspRI | CASTG | 2 cut(s) | 159, 462 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 137 |
| Vha464I | CTTAAG | 1 cut(s) | 410 |
| VpaK11BI | GGWCC | 1 cut(s) | 259 |
| XapI | RAATTY | 1 cut(s) | 96 |
| XceI | RCATGY | 2 cut(s) | 152, 455 |
| XspI | CTAG | 1 cut(s) | 468 |
| ZraI | GACGTC | 1 cut(s) | 368 |