Rorug05G0030700

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000058
Physical Location & Seq
Reverse (-)
1965903 .. 1971718
5816 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0030700.1

Sequence Viewer

Length: 2217 bp
ATGTTTCAGCCAGGCATGTTCGACAGCCACCATATGAGTATGCTGGACATGTCGACCCACAAAAGCCCTGAGAGTGATATGGGAAGGAGCCGGGATGATGATTTTGAGACAAAATCCGGCACTGAAACAACAGATGCTCCCTCTGGAGATGAACTAGATCCCTCCCAACCTCGCCCCAAAAGGAAACGCTACCACCGCCACACACAGCGCCAAATCCAGGAAATGGAAGCATTCTTCAAGGAGTGTCCGCACCCAGATGACAAGCAGAGAAAGGAGCTGAGCCGTGAGCTAGGGTTAGAGCCTTTGCAAGTCAAATTCTGGTTTCAAAATAAGCGAACCCAAATGAAGGCCCAACATGAACGGCATGAGAATTCGATTTTGAAAAATGAAAATGACAAGCTTCGTGCCGAGAACAATCGATACAAGGAAGCCCTCAGCAATGCTACATGCCCCAACTGTGGAGGTCCGGCTGCTCTTGGTGAGATGTCCTTTGATGAGCAACATTTGAGGATCGAAAATGCTCGTTTACGTGAAGAGATTGATAGGATATCTTCAATTGCCGCCAAATACGTTGGCAAGCCTATGTCAAGCTCATTCTCTCACCTTTCATCTTCTCAAGGGCCTTCCCGCTCCCTTGATCTCGCGGTTGGCAGTTTTGGGGCTTCGCAGTCTGTTTATGTAGGAGAAATGTATGGATCTGGTGACCTTTTCAGATCAGTTTCAGTGCCTACTGATGCTGACAAGCCCTTGATTGTTGAGCTTGCCGTGGCAGCCATGGAAGAACTCATTAGAATGGCTCAGGCTGGAGACCCTTTATGGGTTCCTGCTCATGACAACAGCTCATCAACTCATCATGATATTCTAAATGAAGACGAATACTTGAGGGCGTTTCCTCGGGGTATTGGCCCTAAACCATTGGGCTTAAAATCTGAAGCTTCAAGAGAATCAGCATTGGTCATCATGAATCACGTTAACCTTGTTGAGATTCTTATGGATGTGAACCAATGGTCTACTGTGTTCTGTGGTATTGTTTCAAGAGCAATGACCCTTGACATCCTATCAACCGGAGTAGCTGGAAACTACAACGGAGCCTTGCAAGTGATGTCAGCTGAGTTCCAAGTTCCTTCACCGCTTGTTCCAACTCGTGAGAACTACTTTGTAAGGTACTGTAAGCAGCATACTGATGGAACTTGGGCAGTGGTTGATGTTTCCTTGGATAATTTACGCCCAAGTTCAATTTCAAGAAGTCGTAGAAGGCCATCCGGTTGCTTAATCCAAGAATTGCCTAATGGTTACTCCAAGGTTGTATGGGTGGAACACGTAGAAGTGGATGATAGAGCTGTTCACAACATTTACAGACCACTAGTAAACTCTGGTCTTGCATTTGGAGCCAAGCGTTGGGTTGCTACACTTGATAGACAATGTGAACGTCTTGCAAGTTCATTGGCCAACAATATTCCGGCTGGAGATCTCTGTGTCATAACTAGTGCAGAAGGGAGGAAAAGTATGTTGAAGCTCGCGCAGAGGATGGTGTTGAGCTTTTGCACTGGCGTTGGTGCTTCTACGGCACATGCGTGGACGACATTGTCAGCAACAGGCTCTGATGATGTGAGGGTCATGACCAGGAAAAGCATGGATGATCCTGGCAGGCCTCCTGGCATTGTTCTAAGTGCTGCAACTTCCTTCTGGCTTCCAGTTCCTCCCAAGAGAGTCTTTGATTTCCTTCGAGATGAGAATTCTCGGAGTGAGTGGGATATCCTTTCAAATGGTGGCCTAGTGCAAGAGATGGCACACATAGCTAACGGTCGTGATCCTGGTAACTGTGTCTCCTTATTGCGTGTAAATAGTGCAAATTCTAGTCAAAGCAACATGCTGATACTCCAGGAGAGCTGCACAGATTCAACAGGATCGTATGTGATATATGCTCCAGTTGATATTGTGGCCATGAATGTCGTGTTGAGTGGGGGTGACCCTGATTATGTTGCACTTCTGCCATCGGGTTTTGCTATCCTACCTGATGGGCCTCCTGCTGGAGGAGCCGGAGGAATTCTTGATGTTGGTTCTGGTGGATCTCTACTGACAGTAGCATTTCAGATCCTAGTTGATTCAGTTCCTACTGCAAAACTCTCGCTTGGATCTGTGGCCACTGTTAACAATCTGATTAAGTGCACTGTTGAGCGGATTAGAGCTGCGGTCACATGTGATCAGAACCCATGA

Protein Analysis

738

Amino Acids

80.8

Weight (kDa)

5.86

Isoelectric Point (pI)

48.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 61 - 116 4.8e-18 Homeodomain
START PF01852 254 - 477 1.5e-52 START domain
PDF2_C PF25797 496 - 734 3.9e-102 PDF2-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1585
AccB7I CCANNNNNTGG 2 cut(s) 223, 1398
AccBSI CCGCTC 2 cut(s) 630, 2179
AccI GTMKAC 2 cut(s) 53, 1010
AccII CGCG 2 cut(s) 644, 1520
AciI CCGC 8 cut(s) 196, 248, 561, 628, 644, 1130, 2179, 2192
AclWI GGATC 9 cut(s) 152, 518, 703, 1634, 1805, 1915, 2077, 2089, 2143
AcoI YGGCCR 3 cut(s) 1446, 1941, 2142
AcsI RAATTY 5 cut(s) 314, 370, 1735, 1852, 2046
AcuI CTGAAG 1 cut(s) 951
AfaI GTAC 1 cut(s) 1166
AfiI CCNNNNNNNGG 8 cut(s) 217, 223, 346, 458, 817, 1398, 2030, 2033
AflIII ACRYGT 3 cut(s) 48, 1318, 2198
AhlI ACTAGT 2 cut(s) 1363, 1484
AjnI CCWGG 7 cut(s) 10, 216, 1622, 1642, 1654, 1813, 1881
AjuI GAANNNNNNNTTGG 2 cut(s) 1222, 1254
AleI CACNNNNGTG 1 cut(s) 1573
Alw21I GWGCWC 1 cut(s) 2171
Alw26I GTCTC 3 cut(s) 101, 801, 1831
Alw44I GTGCAC 1 cut(s) 2167
AlwI GGATC 9 cut(s) 152, 518, 703, 1634, 1805, 1915, 2077, 2089, 2143
AlwNI CAGNNNCTG 1 cut(s) 1601
Ama87I CYCGRG 1 cut(s) 894
ApaLI GTGCAC 1 cut(s) 2167
ApeKI GCWGC 6 cut(s) 470, 770, 1174, 1673, 1890, 2189
ApoI RAATTY 5 cut(s) 314, 370, 1735, 1852, 2046
AspLEI GCGC 2 cut(s) 210, 1522
AspS9I GGNCC 5 cut(s) 349, 464, 620, 905, 2021
AsuC2I CCSGG 1 cut(s) 92
AsuHPI GGTGA 5 cut(s) 491, 593, 713, 1119, 1979
AvaI CYCGRG 1 cut(s) 894
AvaII GGWCC 1 cut(s) 464
BaeGI GKGCMC 1 cut(s) 2171
BalI TGGCCA 3 cut(s) 1448, 1943, 2144
BauI CACGAG 1 cut(s) 1143
BbsI GAAGAC 1 cut(s) 876
Bbv12I GWGCWC 1 cut(s) 2171
BbvCI CCTCAGC 1 cut(s) 434
BbvI GCAGC 6 cut(s) 457, 782, 1186, 1660, 1877, 2176
BccI CCATC 6 cut(s) 1178, 1267, 1522, 1780, 2002, 2012
BceAI ACGGC 4 cut(s) 267, 377, 749, 1581
BcgI CGANNNNNNTGC 2 cut(s) 2109, 2143
BciT130I CCWGG 7 cut(s) 12, 218, 1624, 1644, 1656, 1815, 1883
BclI TGATCA 1 cut(s) 2203
BcnI CCSGG 1 cut(s) 92
BcoDI GTCTC 3 cut(s) 101, 801, 1831
BcuI ACTAGT 2 cut(s) 1363, 1484
BfaI CTAG 7 cut(s) 155, 290, 1364, 1485, 1775, 1857, 2099
BfoI RGCGCY 1 cut(s) 211
BglII AGATCT 1 cut(s) 1468
BisI GCNGC 7 cut(s) 471, 561, 771, 1175, 1674, 1891, 2190
BlpI GCTNAGC 1 cut(s) 278
BlsI GCNGC 7 cut(s) 472, 562, 772, 1176, 1675, 1892, 2191
Bme1390I CCNGG 8 cut(s) 12, 92, 218, 1624, 1644, 1656, 1815, 1883
Bme18I GGWCC 1 cut(s) 464
BmeT110I CYCGRG 1 cut(s) 894
BmgT120I GGNCC 5 cut(s) 349, 464, 620, 905, 2021
BmiI GGNNCC 5 cut(s) 89, 822, 1090, 1390, 2038
BmrFI CCNGG 8 cut(s) 12, 92, 218, 1624, 1644, 1656, 1815, 1883
BmsI GCATC 2 cut(s) 124, 724
BpiI GAAGAC 1 cut(s) 876
BpmI CTGGAG 6 cut(s) 165, 825, 1485, 1865, 1911, 2052
Bpu10I CCTNAGC 2 cut(s) 434, 798
Bpu1102I GCTNAGC 1 cut(s) 278
BpuEI CTTGAG 2 cut(s) 600, 901
BpuMI CCSGG 1 cut(s) 92
Bsa29I ATCGAT 1 cut(s) 418
BsaAI YACGTR 2 cut(s) 530, 1321
BsaI GGTCTC 1 cut(s) 801
BsaJI CCNNGG 5 cut(s) 765, 774, 893, 1212, 1299
BsaWI WCCGGW 2 cut(s) 1064, 1262
BsaXI ACNNNNNCTCC 6 cut(s) 121, 151, 1489, 1519, 1811, 1841
Bsc4I CCNNNNNNNGG 8 cut(s) 217, 223, 346, 458, 817, 1398, 2030, 2033
Bse1I ACTGG 3 cut(s) 1552, 1694, 1928
Bse3DI GCAATG 2 cut(s) 445, 1047
BseBI CCWGG 7 cut(s) 12, 218, 1624, 1644, 1656, 1815, 1883
BseCI ATCGAT 1 cut(s) 418
BseDI CCNNGG 5 cut(s) 765, 774, 893, 1212, 1299
BseGI GGATG 7 cut(s) 100, 1000, 1053, 1259, 1336, 1533, 1642
BseLI CCNNNNNNNGG 8 cut(s) 217, 223, 346, 458, 817, 1398, 2030, 2033
BseMI GCAATG 2 cut(s) 445, 1047
BseMII CTCAG 5 cut(s) 60, 269, 448, 812, 1101
BseNI ACTGG 3 cut(s) 1552, 1694, 1928
BseRI GAGGAG 1 cut(s) 2049
BseSI GKGCMC 1 cut(s) 2171
BseXI GCAGC 6 cut(s) 457, 782, 1186, 1660, 1877, 2176
BsgI GTGCAG 2 cut(s) 1509, 1876
Bsh1236I CGCG 2 cut(s) 644, 1520
Bsh1285I CGRYCG 1 cut(s) 1807
BshVI ATCGAT 1 cut(s) 418
BsiEI CGRYCG 1 cut(s) 1807
BsiHKAI GWGCWC 1 cut(s) 2171
BsiHKCI CYCGRG 1 cut(s) 894
BsiSI CCGG 7 cut(s) 91, 117, 467, 1065, 1263, 1460, 2040
BslI CCNNNNNNNGG 8 cut(s) 217, 223, 346, 458, 817, 1398, 2030, 2033
BsmAI GTCTC 3 cut(s) 101, 801, 1831
BsmI GAATGC 1 cut(s) 230
Bso31I GGTCTC 1 cut(s) 801
BsoBI CYCGRG 1 cut(s) 894
Bsp1286I GDGCHC 1 cut(s) 2171
Bsp1720I GCTNAGC 1 cut(s) 278
Bsp19I CCATGG 1 cut(s) 774
BspACI CCGC 8 cut(s) 196, 248, 561, 628, 644, 1130, 2179, 2192
BspCNI CTCAG 5 cut(s) 61, 270, 447, 811, 1102
BspDI ATCGAT 1 cut(s) 418
BspFNI CGCG 2 cut(s) 644, 1520
BspHI TCATGA 4 cut(s) 829, 853, 960, 1617
BspLI GGNNCC 5 cut(s) 89, 822, 1090, 1390, 2038
BspPI GGATC 9 cut(s) 152, 518, 703, 1634, 1805, 1915, 2077, 2089, 2143
BspTNI GGTCTC 1 cut(s) 801
BsrBI CCGCTC 2 cut(s) 630, 2179
BsrDI GCAATG 2 cut(s) 445, 1047
BsrI ACTGG 3 cut(s) 1552, 1694, 1928
BssECI CCNNGG 5 cut(s) 765, 774, 893, 1212, 1299
BssSI CACGAG 1 cut(s) 1143
BssT1I CCWWGG 3 cut(s) 774, 1212, 1299
Bst2BI CACGAG 1 cut(s) 1143
Bst2UI CCWGG 7 cut(s) 12, 218, 1624, 1644, 1656, 1815, 1883
Bst4CI ACNGT 8 cut(s) 458, 1015, 1169, 1805, 1823, 2083, 2149, 2173
Bst6I CTCTTC 1 cut(s) 528
BstBAI YACGTR 2 cut(s) 530, 1321
BstC8I GCNNGC 4 cut(s) 578, 762, 1518, 1649
BstDEI CTNAG 6 cut(s) 69, 278, 434, 798, 1110, 1667
BstDSI CCRYGG 2 cut(s) 765, 774
BstEII GGTNACC 2 cut(s) 701, 1967
BstENI CCTNNNNNAGG 1 cut(s) 2031
BstF5I GGATG 7 cut(s) 100, 1000, 1053, 1259, 1336, 1533, 1642
BstFNI CGCG 2 cut(s) 644, 1520
BstH2I RGCGCY 1 cut(s) 211
BstHHI GCGC 2 cut(s) 210, 1522
BstMAI GTCTC 3 cut(s) 101, 801, 1831
BstMCI CGRYCG 1 cut(s) 1807
BstMWI GCNNNNNNNGC 6 cut(s) 195, 770, 1388, 1565, 1796, 2036
BstNI CCWGG 7 cut(s) 12, 218, 1624, 1644, 1656, 1815, 1883
BstNSI RCATGY 6 cut(s) 19, 52, 450, 1574, 1873, 2202
BstPI GGTNACC 2 cut(s) 701, 1967
BstSCI CCNGG 8 cut(s) 10, 90, 216, 1622, 1642, 1654, 1813, 1881
BstSLI GKGCMC 1 cut(s) 2171
BstUI CGCG 2 cut(s) 644, 1520
BstV1I GCAGC 6 cut(s) 457, 782, 1186, 1660, 1877, 2176
BstV2I GAAGAC 1 cut(s) 876
BstX2I RGATCY 6 cut(s) 157, 695, 1468, 2069, 2094, 2135
BstYI RGATCY 6 cut(s) 157, 695, 1468, 2069, 2094, 2135
Bsu15I ATCGAT 1 cut(s) 418
BsuTUI ATCGAT 1 cut(s) 418
BtgI CCRYGG 2 cut(s) 765, 774
BtsCI GGATG 7 cut(s) 100, 1000, 1053, 1259, 1336, 1533, 1642
BtsI GCAGTG 1 cut(s) 1203
BtsIMutI CAGTG 6 cut(s) 120, 729, 1203, 1545, 2145, 2169
Cac8I GCNNGC 4 cut(s) 578, 762, 1518, 1649
CaiI CAGNNNCTG 1 cut(s) 1601
CciI TCATGA 4 cut(s) 829, 853, 960, 1617
CfoI GCGC 2 cut(s) 210, 1522
Cfr13I GGNCC 5 cut(s) 349, 464, 620, 905, 2021
ClaI ATCGAT 1 cut(s) 418
Csp6I GTAC 1 cut(s) 1165
CviQI GTAC 1 cut(s) 1165
DdeI CTNAG 6 cut(s) 69, 278, 434, 798, 1110, 1667
DrdI GACNNNNNNGTC 1 cut(s) 1585
DseDI GACNNNNNNGTC 1 cut(s) 1585
EaeI YGGCCR 3 cut(s) 1446, 1941, 2142
Eam1104I CTCTTC 1 cut(s) 528
EarI CTCTTC 1 cut(s) 528
Eco130I CCWWGG 3 cut(s) 774, 1212, 1299
Eco147I AGGCCT 1 cut(s) 1651
Eco31I GGTCTC 1 cut(s) 801
Eco32I GATATC 2 cut(s) 549, 1756
Eco47I GGWCC 1 cut(s) 464
Eco57I CTGAAG 1 cut(s) 951
Eco88I CYCGRG 1 cut(s) 894
Eco91I GGTNACC 2 cut(s) 701, 1967
EcoNI CCTNNNNNAGG 1 cut(s) 2031
EcoO109I RGGNCCY 1 cut(s) 620
EcoO65I GGTNACC 2 cut(s) 701, 1967
EcoRI GAATTC 3 cut(s) 370, 1735, 2046
EcoRII CCWGG 7 cut(s) 10, 216, 1622, 1642, 1654, 1813, 1881
EcoRV GATATC 2 cut(s) 549, 1756
EcoT14I CCWWGG 3 cut(s) 774, 1212, 1299
ErhI CCWWGG 3 cut(s) 774, 1212, 1299
FalI AAGNNNNNCTT 2 cut(s) 1697, 1729
FauI CCCGC 1 cut(s) 635
FauNDI CATATG 1 cut(s) 33
FbaI TGATCA 1 cut(s) 2203
FblI GTMKAC 2 cut(s) 53, 1010
Fnu4HI GCNGC 7 cut(s) 471, 561, 771, 1175, 1674, 1891, 2190
FokI GGATG 7 cut(s) 107, 1007, 1040, 1246, 1343, 1540, 1649
Fsp4HI GCNGC 7 cut(s) 471, 561, 771, 1175, 1674, 1891, 2190
FspBI CTAG 7 cut(s) 155, 290, 1364, 1485, 1775, 1857, 2099
GlaI GCGC 2 cut(s) 209, 1521
GluI GCNGC 7 cut(s) 471, 561, 771, 1175, 1674, 1891, 2190
GsuI CTGGAG 6 cut(s) 165, 825, 1485, 1865, 1911, 2052
HaeII RGCGCY 1 cut(s) 211
HapII CCGG 7 cut(s) 91, 117, 467, 1065, 1263, 1460, 2040
HhaI GCGC 2 cut(s) 210, 1522
Hin6I GCGC 2 cut(s) 208, 1520
HinP1I GCGC 2 cut(s) 208, 1520
HincII GTYRAC 3 cut(s) 54, 973, 2152
HindII GTYRAC 3 cut(s) 54, 973, 2152
HindIII AAGCTT 2 cut(s) 398, 933
HinfI GANTC 6 cut(s) 944, 964, 985, 1710, 1898, 2105
HpaI GTTAAC 2 cut(s) 973, 2152
HpaII CCGG 7 cut(s) 91, 117, 467, 1065, 1263, 1460, 2040
HphI GGTGA 5 cut(s) 491, 593, 713, 1119, 1979
Hpy188I TCNGA 7 cut(s) 713, 931, 1603, 1743, 2094, 2160, 2208
HpyAV CCTTC 8 cut(s) 78, 340, 633, 1134, 1248, 1487, 1693, 1733
HpyCH4III ACNGT 8 cut(s) 458, 1015, 1169, 1805, 1823, 2083, 2149, 2173
HpyCH4IV ACGT 5 cut(s) 529, 570, 969, 1320, 1429
HpyF10VI GCNNNNNNNGC 6 cut(s) 195, 770, 1388, 1565, 1796, 2036
HpyF3I CTNAG 6 cut(s) 69, 278, 434, 798, 1110, 1667
HpySE526I ACGT 5 cut(s) 529, 570, 969, 1320, 1429
HspAI GCGC 2 cut(s) 208, 1520
Ksp22I TGATCA 1 cut(s) 2203
KspAI GTTAAC 2 cut(s) 973, 2152
LmnI GCTCC 8 cut(s) 87, 142, 274, 635, 1088, 1388, 1930, 2036
Lsp1109I GCAGC 6 cut(s) 457, 782, 1186, 1660, 1877, 2176
LweI GCATC 2 cut(s) 124, 724
MaeI CTAG 7 cut(s) 155, 290, 1364, 1485, 1775, 1857, 2099
MaeII ACGT 5 cut(s) 529, 570, 969, 1320, 1429
MaeIII GTNAC 5 cut(s) 701, 1292, 1817, 1967, 2194
MbiI CCGCTC 2 cut(s) 630, 2179
MboII GAAGA 6 cut(s) 226, 543, 545, 603, 791, 881
MfeI CAATTG 1 cut(s) 555
MflI RGATCY 6 cut(s) 157, 695, 1468, 2069, 2094, 2135
MhlI GDGCHC 1 cut(s) 2171
MlsI TGGCCA 3 cut(s) 1448, 1943, 2144
MluCI AATT 9 cut(s) 314, 370, 555, 1219, 1236, 1280, 1735, 1852, 2046
MluNI TGGCCA 3 cut(s) 1448, 1943, 2144
MlyI GAGTC 1 cut(s) 1719
MmeI TCCRAC 1 cut(s) 1163
Mox20I TGGCCA 3 cut(s) 1448, 1943, 2144
MscI TGGCCA 3 cut(s) 1448, 1943, 2144
MseI TTAA 5 cut(s) 923, 972, 1271, 2151, 2163
MslI CAYNNNNRTG 4 cut(s) 255, 791, 1182, 1573
Msp20I TGGCCA 3 cut(s) 1448, 1943, 2144
MspA1I CMGCKG 1 cut(s) 1109
MspI CCGG 7 cut(s) 91, 117, 467, 1065, 1263, 1460, 2040
MspR9I CCNGG 8 cut(s) 12, 92, 218, 1624, 1644, 1656, 1815, 1883
MunI CAATTG 1 cut(s) 555
Mva1269I GAATGC 1 cut(s) 230
MvaI CCWGG 7 cut(s) 12, 218, 1624, 1644, 1656, 1815, 1883
MvnI CGCG 2 cut(s) 644, 1520
MwoI GCNNNNNNNGC 6 cut(s) 195, 770, 1388, 1565, 1796, 2036
NciI CCSGG 1 cut(s) 92
NcoI CCATGG 1 cut(s) 774
NdeI CATATG 1 cut(s) 33
NlaIV GGNNCC 5 cut(s) 89, 822, 1090, 1390, 2038
NmeAIII GCCGAG 1 cut(s) 433
NmuCI GTSAC 3 cut(s) 701, 1967, 2194
NspI RCATGY 6 cut(s) 19, 52, 450, 1574, 1873, 2202
OliI CACNNNNGTG 1 cut(s) 1573
PagI TCATGA 4 cut(s) 829, 853, 960, 1617
PceI AGGCCT 1 cut(s) 1651
PciI ACATGT 2 cut(s) 48, 2198
PcsI WCGNNNNNNNCGW 1 cut(s) 1571
PctI GAATGC 1 cut(s) 230
PfeI GAWTC 5 cut(s) 944, 964, 985, 1898, 2105
PflFI GACNNNGTC 1 cut(s) 1585
PflMI CCANNNNNTGG 2 cut(s) 223, 1398
PfoI TCCNGGA 2 cut(s) 216, 1881
PkrI GCNGC 7 cut(s) 472, 562, 772, 1176, 1675, 1892, 2191
PleI GAGTC 1 cut(s) 1718
PpsI GAGTC 1 cut(s) 1718
Ppu21I YACGTR 2 cut(s) 530, 1321
PscI ACATGT 2 cut(s) 48, 2198
Psp6I CCWGG 7 cut(s) 10, 216, 1622, 1642, 1654, 1813, 1881
PspEI GGTNACC 2 cut(s) 701, 1967
PspGI CCWGG 7 cut(s) 10, 216, 1622, 1642, 1654, 1813, 1881
PspN4I GGNNCC 5 cut(s) 89, 822, 1090, 1390, 2038
PspPI GGNCC 5 cut(s) 349, 464, 620, 905, 2021
PsrI GAACNNNNNNTAC 2 cut(s) 404, 436
PstNI CAGNNNCTG 1 cut(s) 1601
PsuI RGATCY 6 cut(s) 157, 695, 1468, 2069, 2094, 2135
PsyI GACNNNGTC 1 cut(s) 1585
PvuII CAGCTG 1 cut(s) 1109
RsaI GTAC 1 cut(s) 1166
RsaNI GTAC 1 cut(s) 1165
RseI CAYNNNNRTG 4 cut(s) 255, 791, 1182, 1573
SalI GTCGAC 1 cut(s) 52
SaqAI TTAA 5 cut(s) 923, 972, 1271, 2151, 2163
SatI GCNGC 7 cut(s) 471, 561, 771, 1175, 1674, 1891, 2190
Sau96I GGNCC 5 cut(s) 349, 464, 620, 905, 2021
SchI GAGTC 1 cut(s) 1719
ScrFI CCNGG 8 cut(s) 12, 92, 218, 1624, 1644, 1656, 1815, 1883
SduI GDGCHC 1 cut(s) 2171
SfaNI GCATC 2 cut(s) 124, 724
SinI GGWCC 1 cut(s) 464
SmiMI CAYNNNNRTG 4 cut(s) 255, 791, 1182, 1573
SmlI CTYRAG 2 cut(s) 615, 880
SmoI CTYRAG 2 cut(s) 615, 880
SpeI ACTAGT 2 cut(s) 1363, 1484
Sse9I AATT 9 cut(s) 314, 370, 555, 1219, 1236, 1280, 1735, 1852, 2046
SseBI AGGCCT 1 cut(s) 1651
SsiI CCGC 8 cut(s) 196, 248, 561, 628, 644, 1130, 2179, 2192
SspI AATATT 1 cut(s) 1456
SspMI CTAG 7 cut(s) 155, 290, 1364, 1485, 1775, 1857, 2099
StuI AGGCCT 1 cut(s) 1651
StyD4I CCNGG 8 cut(s) 10, 90, 216, 1622, 1642, 1654, 1813, 1881
StyI CCWWGG 3 cut(s) 774, 1212, 1299
TaaI ACNGT 8 cut(s) 458, 1015, 1169, 1805, 1823, 2083, 2149, 2173
TaiI ACGT 5 cut(s) 532, 573, 972, 1323, 1432
TaqI TCGA 6 cut(s) 21, 53, 374, 418, 513, 1726
TasI AATT 9 cut(s) 314, 370, 555, 1219, 1236, 1280, 1735, 1852, 2046
TauI GCSGC 1 cut(s) 563
TfiI GAWTC 5 cut(s) 944, 964, 985, 1898, 2105
Tru1I TTAA 5 cut(s) 923, 972, 1271, 2151, 2163
Tru9I TTAA 5 cut(s) 923, 972, 1271, 2151, 2163
TscAI CASTG 6 cut(s) 127, 729, 1203, 1552, 2152, 2176
TseFI GTSAC 3 cut(s) 701, 1967, 2194
TseI GCWGC 6 cut(s) 470, 770, 1174, 1673, 1890, 2189
Tsp45I GTSAC 3 cut(s) 701, 1967, 2194
TspDTI ATGAA 9 cut(s) 165, 359, 372, 402, 597, 882, 977, 1431, 1961
TspGWI ACGGA 1 cut(s) 1101
TspRI CASTG 6 cut(s) 127, 729, 1203, 1552, 2152, 2176
Tth111I GACNNNGTC 1 cut(s) 1585
Van91I CCANNNNNTGG 2 cut(s) 223, 1398
VneI GTGCAC 1 cut(s) 2167
VpaK11BI GGWCC 1 cut(s) 464
XagI CCTNNNNNAGG 1 cut(s) 2031
XapI RAATTY 5 cut(s) 314, 370, 1735, 1852, 2046
XceI RCATGY 6 cut(s) 19, 52, 450, 1574, 1873, 2202
XcmI CCANNNNNNNNNTGG 1 cut(s) 1630
XmiI GTMKAC 2 cut(s) 53, 1010
XspI CTAG 7 cut(s) 155, 290, 1364, 1485, 1775, 1857, 2099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.