FvH4_7g09050

wall-associated receptor kinase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000058
Physical Location & Seq
Forward (+)
8806458 .. 8811183
4726 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g09050.t1

Sequence Viewer

Length: 1827 bp
ATGATTCATTTCCTCATCCAAAGTCTTCTGATTCTCCTCCTCATAGCTTCCATAGCCACATCCCAGAACTGCACAACCACATGCGGATCCGAGTCGGTTCAGTACCCGTTCGGATTCTCCGACGGGTGCAAAATCCGATTGAACTGCTCCGACCCCCATACCTCGATCGGTAACTTCACAGTGCAGAATATAACCTCCACCAGCATCTTCGTCAATCTTCCGGCAAAATGTAACAGACCGGTAAAATCTATGATAGAACTTTTCGGCCCAAACTTCGGCCCAACTTGGAACAACAGCTTGCTCTTCCAGAACTGCCTCAACTCCCAAAACGGCTGCTACATTCCGGCGGCTTTTGTTGAAAAGCAGTTTGCTTTGGAAAGCTGTAAAGGCAACAACGAAAGCATCAGCTGTTTCACCGAAGAGAAGAGTAACAGGTCGGAGATCGTTGAGTATGATTACTTAAGTAGGAAGAATTGTAAGTACTTGTTCGGTTCGATTGCGGTTCATTCAGGTGATCAGAACTCGCCGCTGTCATTGGAGTTTGAGACGATCGAGTTGGGGTGGTGGGTTTCCGGGTCCTGCCTTGATTGCGCTGACAATGCCGCGTGTACGCATGTTAAGCTCCCCGGGGTGAATCCCCCGGGGTTCCGCTGCCAGTGTTTGGAAGGGTTTCACGGCGACGGGTTCAGAAACGGGTCGGGTTGCCGGAGAGTTTCTGAATGCAATGCTTCAAGGTACATTTCTGGACGTTGTGGGGGAAGAGTCGGTATTCTTATTGCGGGGATCTTGTCAGCAATGTTCATAGTGTCCGCCATTTGGATAGTGATACTACGTAGAAGGAAGAATGTGGAAGCTGCAAAAGAGACTACAGTGTTACCTCAACTTCTATGGAGAAGAGTTTCACACCTTGAACTTGTTAGAGCAACAAACGCATTTGATGAAAGCACCTTACTTGGCAGTGGTGGTTTTGGCTTAGTGTACAAAGGAACATTTTCTGATGGGATAGACGTGGCCATAAAGGTATTCAATTTACAACTAGAAGGGGCGTTCAAGAGTTTCGATATTGAGTGTGAAATGCTAAGCAACATTCGTCATCGGAATCTTATCAAAATCATCAGTTGTTGTAGTCAAATTGATTTCAAAGCCGTAGTACTAAACTACATGCCTAATGGGAGCCTTGAGAAGTGGTTATATTCTCAAACCTTGTGTTTGAACATCCTGCAAAGATTGAGTATTATGATAGATGTTGCGTCGGCATTGGAATACCTTCATTATGGCTATGAATCAATAATTGTTCACTGTGATTTGAAGCCTAGCAATATCCTACTCGATGAGGATATGAGTGCACATGTTGCTGACTTTGGCATTGCAAAACTCTTGTGTGGAATAGATTCCATGACTCAAACTATCACTCAAGCCACAATCGGATACATGGCCCCAGAGTATGGAATGGAAGGAATAGTTACTAGAAGAGGGGATGTGTACAGTTTTGGTATCGTGTTGATGGAAACATTCACTGGAAAGAAGCCAACGGATGAGATCTTTGTTGGGGAAATGAGTTTGAAACAATGGGTTGCAAATTCACCATTGCTTAATGCTGTGGATGCCAACTTACAAGTGACACAAGCAGAGGATGTTGTGAACGAGAGCGAGTGTATGTCATCCATAATGAGATTAGCTCTAGCTTGTTCCGCAGAATCACCGGAAGAGAGGGTGACTATACAAGGAGCTCTAGCCACGTTGCAGAAGATCAAGATCAAGTTTTTAAATGACACTACCGGAGGTGTGGTGTTGAACCGTTGTCTTGTTAAGCAGTCCTTTATTTGA

Protein Analysis

609

Amino Acids

67.02

Weight (kDa)

5.79

Isoelectric Point (pI)

48.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 314 - 579 4.3e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 316 - 575 6.4e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 661, 1445
AccII CGCG 1 cut(s) 605
AciI CCGC 9 cut(s) 84, 347, 500, 527, 603, 649, 779, 810, 1692
AclWI GGATC 3 cut(s) 81, 94, 791
AcoI YGGCCR 1 cut(s) 1011
AcsI RAATTY 1 cut(s) 1579
AfaI GTAC 7 cut(s) 104, 482, 610, 737, 980, 1152, 1484
AfiI CCNNNNNNNGG 4 cut(s) 275, 661, 816, 1445
AflII CTTAAG 1 cut(s) 460
AflIII ACRYGT 1 cut(s) 1348
AgeI ACCGGT 1 cut(s) 238
AjiI CACGTC 1 cut(s) 1009
AluBI AGCT 9 cut(s) 47, 297, 381, 408, 622, 854, 1679, 1685, 1730
AluI AGCT 9 cut(s) 47, 297, 381, 408, 622, 854, 1679, 1685, 1730
Alw21I GWGCWC 2 cut(s) 1348, 1732
Alw26I GTCTC 2 cut(s) 539, 857
Alw44I GTGCAC 1 cut(s) 1344
AlwI GGATC 3 cut(s) 81, 94, 791
Ama87I CYCGRG 2 cut(s) 626, 640
AoxI GGCC 4 cut(s) 265, 277, 1011, 1434
ApaLI GTGCAC 1 cut(s) 1344
ApeKI GCWGC 3 cut(s) 333, 651, 854
ApoI RAATTY 1 cut(s) 1579
AsiGI ACCGGT 1 cut(s) 238
Asp700I GAANNNNTTC 5 cut(s) 669, 898, 991, 1266, 1390
AspLEI GCGC 1 cut(s) 593
AspS9I GGNCC 4 cut(s) 266, 278, 576, 1435
AsuC2I CCSGG 5 cut(s) 574, 627, 628, 641, 642
AsuHPI GGTGA 6 cut(s) 406, 524, 643, 1575, 1692, 1726
AvaI CYCGRG 2 cut(s) 626, 640
AvaII GGWCC 1 cut(s) 576
BaeGI GKGCMC 1 cut(s) 1348
BalI TGGCCA 1 cut(s) 1013
BamHI GGATCC 1 cut(s) 86
BanII GRGCYC 1 cut(s) 1732
BbsI GAAGAC 1 cut(s) 17
Bbv12I GWGCWC 2 cut(s) 1348, 1732
BbvI GCAGC 3 cut(s) 320, 638, 841
BccI CCATC 2 cut(s) 992, 1498
BceAI ACGGC 3 cut(s) 346, 691, 1130
BcgI CGANNNNNNTGC 2 cut(s) 126, 160
BciVI GTATCC 1 cut(s) 1421
BclI TGATCA 1 cut(s) 514
BcnI CCSGG 5 cut(s) 574, 627, 628, 641, 642
BcoDI GTCTC 2 cut(s) 539, 857
BfaI CTAG 5 cut(s) 1037, 1314, 1467, 1682, 1733
BfmI CTRYAG 1 cut(s) 867
BfrI CTTAAG 1 cut(s) 460
BfuI GTATCC 1 cut(s) 1421
BglII AGATCT 1 cut(s) 1539
BisI GCNGC 6 cut(s) 334, 348, 527, 603, 652, 855
BlpI GCTNAGC 1 cut(s) 1079
BlsI GCNGC 6 cut(s) 335, 349, 528, 604, 653, 856
BmcAI AGTACT 2 cut(s) 482, 1152
Bme1390I CCNGG 5 cut(s) 574, 627, 628, 641, 642
Bme18I GGWCC 1 cut(s) 576
BmeT110I CYCGRG 2 cut(s) 626, 640
BmgBI CACGTC 1 cut(s) 1009
BmgT120I GGNCC 4 cut(s) 266, 278, 576, 1435
BmiI GGNNCC 5 cut(s) 88, 577, 647, 1175, 1437
BmrFI CCNGG 5 cut(s) 574, 627, 628, 641, 642
BmsI GCATC 3 cut(s) 213, 411, 1594
BpiI GAAGAC 1 cut(s) 17
BplI GAGNNNNNCTC 2 cut(s) 1663, 1695
Bpu1102I GCTNAGC 1 cut(s) 1079
BpuEI CTTGAG 2 cut(s) 1199, 1398
BpuMI CCSGG 5 cut(s) 574, 627, 628, 641, 642
BsaAI YACGTR 1 cut(s) 833
BsaBI GATNNNNATC 1 cut(s) 1754
BsaJI CCNNGG 6 cut(s) 625, 626, 627, 639, 640, 641
BsaWI WCCGGW 3 cut(s) 238, 1702, 1778
BsaXI ACNNNNNCTCC 2 cut(s) 1773, 1803
Bsc4I CCNNNNNNNGG 4 cut(s) 275, 661, 816, 1445
Bse118I RCCGGY 1 cut(s) 238
Bse1I ACTGG 2 cut(s) 655, 1522
Bse3DI GCAATG 4 cut(s) 730, 801, 1365, 1586
Bse8I GATNNNNATC 1 cut(s) 1754
BseDI CCNNGG 6 cut(s) 625, 626, 627, 639, 640, 641
BseGI GGATG 8 cut(s) 15, 59, 1215, 1483, 1540, 1609, 1639, 1661
BseJI GATNNNNATC 1 cut(s) 1754
BseLI CCNNNNNNNGG 4 cut(s) 275, 661, 816, 1445
BseMI GCAATG 4 cut(s) 730, 801, 1365, 1586
BseNI ACTGG 2 cut(s) 655, 1522
BseRI GAGGAG 2 cut(s) 26, 29
BseSI GKGCMC 1 cut(s) 1348
BseXI GCAGC 3 cut(s) 320, 638, 841
BsgI GTGCAG 2 cut(s) 55, 203
Bsh1236I CGCG 1 cut(s) 605
Bsh1285I CGRYCG 2 cut(s) 168, 552
BshFI GGCC 4 cut(s) 267, 279, 1013, 1436
BshTI ACCGGT 1 cut(s) 238
BsiEI CGRYCG 2 cut(s) 168, 552
BsiHKAI GWGCWC 2 cut(s) 1348, 1732
BsiHKCI CYCGRG 2 cut(s) 626, 640
BsiSI CCGG 9 cut(s) 221, 239, 344, 573, 627, 641, 706, 1703, 1779
BslI CCNNNNNNNGG 4 cut(s) 275, 661, 816, 1445
BsmAI GTCTC 2 cut(s) 539, 857
BsmBI CGTCTC 1 cut(s) 539
BsmI GAATGC 1 cut(s) 725
BsnI GGCC 4 cut(s) 267, 279, 1013, 1436
BsoBI CYCGRG 2 cut(s) 626, 640
Bsp1286I GDGCHC 2 cut(s) 1348, 1732
Bsp1407I TGTACA 2 cut(s) 978, 1482
Bsp143I GATC 9 cut(s) 86, 165, 441, 514, 549, 783, 1539, 1749, 1755
Bsp1720I GCTNAGC 1 cut(s) 1079
BspACI CCGC 9 cut(s) 84, 347, 500, 527, 603, 649, 779, 810, 1692
BspANI GGCC 4 cut(s) 267, 279, 1013, 1436
BspFNI CGCG 1 cut(s) 605
BspLI GGNNCC 5 cut(s) 88, 577, 647, 1175, 1437
BspPI GGATC 3 cut(s) 81, 94, 791
BspQI GCTCTTC 1 cut(s) 308
BspTI CTTAAG 1 cut(s) 460
BsrDI GCAATG 4 cut(s) 730, 801, 1365, 1586
BsrFI RCCGGY 1 cut(s) 238
BsrGI TGTACA 2 cut(s) 978, 1482
BsrI ACTGG 2 cut(s) 655, 1522
BssAI RCCGGY 1 cut(s) 238
BssECI CCNNGG 6 cut(s) 625, 626, 627, 639, 640, 641
BssMI GATC 9 cut(s) 86, 165, 441, 514, 549, 783, 1539, 1749, 1755
Bst4CI ACNGT 5 cut(s) 181, 871, 1301, 1487, 1799
Bst6I CTCTTC 7 cut(s) 308, 414, 419, 754, 889, 1465, 1701
BstAFI CTTAAG 1 cut(s) 460
BstAPI GCANNNNNTGC 1 cut(s) 1352
BstAUI TGTACA 2 cut(s) 978, 1482
BstBAI YACGTR 1 cut(s) 833
BstC8I GCNNGC 1 cut(s) 299
BstDEI CTNAG 2 cut(s) 973, 1079
BstF5I GGATG 8 cut(s) 15, 59, 1215, 1483, 1540, 1609, 1639, 1661
BstFNI CGCG 1 cut(s) 605
BstHHI GCGC 1 cut(s) 593
BstKTI GATC 9 cut(s) 89, 168, 444, 517, 552, 786, 1542, 1752, 1758
BstMAI GTCTC 2 cut(s) 539, 857
BstMBI GATC 9 cut(s) 86, 165, 441, 514, 549, 783, 1539, 1749, 1755
BstMCI CGRYCG 2 cut(s) 168, 552
BstMWI GCNNNNNNNGC 9 cut(s) 53, 387, 588, 599, 619, 929, 1352, 1604, 1691
BstNSI RCATGY 4 cut(s) 84, 617, 1165, 1352
BstSCI CCNGG 5 cut(s) 572, 625, 626, 639, 640
BstSFI CTRYAG 1 cut(s) 867
BstSLI GKGCMC 1 cut(s) 1348
BstSNI TACGTA 1 cut(s) 833
BstUI CGCG 1 cut(s) 605
BstV1I GCAGC 3 cut(s) 320, 638, 841
BstV2I GAAGAC 1 cut(s) 17
BstX2I RGATCY 3 cut(s) 86, 783, 1539
BstYI RGATCY 3 cut(s) 86, 783, 1539
BsuI GTATCC 1 cut(s) 1421
BsuRI GGCC 4 cut(s) 267, 279, 1013, 1436
BtrI CACGTC 1 cut(s) 1009
BtsCI GGATG 8 cut(s) 15, 59, 1215, 1483, 1540, 1609, 1639, 1661
BtsI GCAGTG 1 cut(s) 964
BtsIMutI CAGTG 6 cut(s) 186, 662, 876, 964, 1297, 1515
Cac8I GCNNGC 1 cut(s) 299
CfoI GCGC 1 cut(s) 593
Cfr10I RCCGGY 1 cut(s) 238
Cfr13I GGNCC 4 cut(s) 266, 278, 576, 1435
Cfr9I CCCGGG 2 cut(s) 626, 640
CseI GACGC 1 cut(s) 1239
Csp6I GTAC 7 cut(s) 103, 481, 609, 736, 979, 1151, 1483
CspAI ACCGGT 1 cut(s) 238
CviAII CATG 6 cut(s) 81, 614, 1162, 1349, 1396, 1432
CviQI GTAC 7 cut(s) 103, 481, 609, 736, 979, 1151, 1483
DdeI CTNAG 2 cut(s) 973, 1079
DpnI GATC 9 cut(s) 88, 167, 443, 516, 551, 785, 1541, 1751, 1757
DpnII GATC 9 cut(s) 86, 165, 441, 514, 549, 783, 1539, 1749, 1755
DraI TTTAAA 1 cut(s) 1767
EaeI YGGCCR 1 cut(s) 1011
Eam1104I CTCTTC 7 cut(s) 308, 414, 419, 754, 889, 1465, 1701
EarI CTCTTC 7 cut(s) 308, 414, 419, 754, 889, 1465, 1701
EciI GGCGGA 1 cut(s) 799
Ecl136II GAGCTC 1 cut(s) 1730
Eco105I TACGTA 1 cut(s) 833
Eco24I GRGCYC 1 cut(s) 1732
Eco47I GGWCC 1 cut(s) 576
Eco53kI GAGCTC 1 cut(s) 1730
Eco88I CYCGRG 2 cut(s) 626, 640
EcoICRI GAGCTC 1 cut(s) 1730
EcoO109I RGGNCCY 1 cut(s) 576
EcoT38I GRGCYC 1 cut(s) 1732
Esp3I CGTCTC 1 cut(s) 539
FaeI CATG 6 cut(s) 84, 617, 1165, 1352, 1399, 1435
FalI AAGNNNNNCTT 1 cut(s) 1802
FatI CATG 6 cut(s) 80, 613, 1161, 1348, 1395, 1431
FauI CCCGC 1 cut(s) 772
FbaI TGATCA 1 cut(s) 514
Fnu4HI GCNGC 6 cut(s) 334, 348, 527, 603, 652, 855
FokI GGATG 8 cut(s) 2, 46, 1202, 1490, 1547, 1616, 1646, 1648
FriOI GRGCYC 1 cut(s) 1732
Fsp4HI GCNGC 6 cut(s) 334, 348, 527, 603, 652, 855
FspBI CTAG 5 cut(s) 1037, 1314, 1467, 1682, 1733
GlaI GCGC 1 cut(s) 592
GluI GCNGC 6 cut(s) 334, 348, 527, 603, 652, 855
HaeIII GGCC 4 cut(s) 267, 279, 1013, 1436
HapII CCGG 9 cut(s) 221, 239, 344, 573, 627, 641, 706, 1703, 1779
HgaI GACGC 1 cut(s) 1239
HhaI GCGC 1 cut(s) 593
Hin1II CATG 6 cut(s) 84, 617, 1165, 1352, 1399, 1435
Hin6I GCGC 1 cut(s) 591
HinP1I GCGC 1 cut(s) 591
HpaII CCGG 9 cut(s) 221, 239, 344, 573, 627, 641, 706, 1703, 1779
HphI GGTGA 6 cut(s) 406, 524, 643, 1575, 1692, 1726
Hpy166II GTNNAC 6 cut(s) 609, 979, 1297, 1346, 1483, 1642
Hpy188III TCNNGA 4 cut(s) 307, 744, 1051, 1753
Hpy8I GTNNAC 6 cut(s) 609, 979, 1297, 1346, 1483, 1642
Hpy99I CGWCG 3 cut(s) 125, 683, 1255
HpyAV CCTTC 5 cut(s) 659, 831, 1034, 1277, 1448
HpyCH4III ACNGT 5 cut(s) 181, 871, 1301, 1487, 1799
HpyCH4IV ACGT 4 cut(s) 748, 832, 1008, 1739
HpyF10VI GCNNNNNNNGC 9 cut(s) 53, 387, 588, 599, 619, 929, 1352, 1604, 1691
HpyF3I CTNAG 2 cut(s) 973, 1079
HpySE526I ACGT 4 cut(s) 748, 832, 1008, 1739
Hsp92II CATG 6 cut(s) 84, 617, 1165, 1352, 1399, 1435
HspAI GCGC 1 cut(s) 591
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 9 cut(s) 86, 165, 441, 514, 549, 783, 1539, 1749, 1755
LguI GCTCTTC 1 cut(s) 308
LmnI GCTCC 4 cut(s) 152, 627, 1173, 1727
Lsp1109I GCAGC 3 cut(s) 320, 638, 841
LweI GCATC 3 cut(s) 213, 411, 1594
MaeI CTAG 5 cut(s) 1037, 1314, 1467, 1682, 1733
MaeII ACGT 4 cut(s) 748, 832, 1008, 1739
MaeIII GTNAC 7 cut(s) 170, 230, 428, 873, 1462, 1618, 1714
MalI GATC 9 cut(s) 88, 167, 443, 516, 551, 785, 1541, 1751, 1757
MboI GATC 9 cut(s) 86, 165, 441, 514, 549, 783, 1539, 1749, 1755
MflI RGATCY 3 cut(s) 86, 783, 1539
MhlI GDGCHC 2 cut(s) 1348, 1732
MlsI TGGCCA 1 cut(s) 1013
MluCI AATT 5 cut(s) 472, 1027, 1131, 1290, 1579
MluNI TGGCCA 1 cut(s) 1013
MlyI GAGTC 3 cut(s) 101, 771, 1393
MmeI TCCRAC 3 cut(s) 144, 174, 417
Mox20I TGGCCA 1 cut(s) 1013
MroXI GAANNNNTTC 5 cut(s) 669, 898, 991, 1266, 1390
MscI TGGCCA 1 cut(s) 1013
MseI TTAA 5 cut(s) 461, 618, 1593, 1766, 1809
MslI CAYNNNNRTG 1 cut(s) 510
Msp20I TGGCCA 1 cut(s) 1013
MspA1I CMGCKG 3 cut(s) 408, 529, 651
MspCI CTTAAG 1 cut(s) 460
MspI CCGG 9 cut(s) 221, 239, 344, 573, 627, 641, 706, 1703, 1779
MspR9I CCNGG 5 cut(s) 574, 627, 628, 641, 642
Mva1269I GAATGC 1 cut(s) 725
MvnI CGCG 1 cut(s) 605
MwoI GCNNNNNNNGC 9 cut(s) 53, 387, 588, 599, 619, 929, 1352, 1604, 1691
NciI CCSGG 5 cut(s) 574, 627, 628, 641, 642
NdeII GATC 9 cut(s) 86, 165, 441, 514, 549, 783, 1539, 1749, 1755
NlaIII CATG 6 cut(s) 84, 617, 1165, 1352, 1399, 1435
NlaIV GGNNCC 5 cut(s) 88, 577, 647, 1175, 1437
NmuCI GTSAC 2 cut(s) 1618, 1714
NspI RCATGY 4 cut(s) 84, 617, 1165, 1352
PciI ACATGT 1 cut(s) 1348
PciSI GCTCTTC 1 cut(s) 308
PcsI WCGNNNNNNNCGW 1 cut(s) 117
PctI GAATGC 1 cut(s) 725
PdmI GAANNNNTTC 5 cut(s) 669, 898, 991, 1266, 1390
PfeI GAWTC 8 cut(s) 4, 31, 114, 634, 1099, 1283, 1391, 1697
PflMI CCANNNNNTGG 2 cut(s) 661, 1445
PinAI ACCGGT 1 cut(s) 238
PkrI GCNGC 6 cut(s) 335, 349, 528, 604, 653, 856
Ple19I CGATCG 2 cut(s) 168, 552
PleI GAGTC 3 cut(s) 100, 770, 1393
PpsI GAGTC 3 cut(s) 100, 770, 1393
Ppu21I YACGTR 1 cut(s) 833
PpuMI RGGWCCY 1 cut(s) 576
PscI ACATGT 1 cut(s) 1348
Psp124BI GAGCTC 1 cut(s) 1732
Psp5II RGGWCCY 1 cut(s) 576
PspN4I GGNNCC 5 cut(s) 88, 577, 647, 1175, 1437
PspPI GGNCC 4 cut(s) 266, 278, 576, 1435
PspPPI RGGWCCY 1 cut(s) 576
PsuI RGATCY 3 cut(s) 86, 783, 1539
PvuI CGATCG 2 cut(s) 168, 552
PvuII CAGCTG 1 cut(s) 408
RsaI GTAC 7 cut(s) 104, 482, 610, 737, 980, 1152, 1484
RsaNI GTAC 7 cut(s) 103, 481, 609, 736, 979, 1151, 1483
RseI CAYNNNNRTG 1 cut(s) 510
SacI GAGCTC 1 cut(s) 1732
SapI GCTCTTC 1 cut(s) 308
SaqAI TTAA 5 cut(s) 461, 618, 1593, 1766, 1809
SatI GCNGC 6 cut(s) 334, 348, 527, 603, 652, 855
Sau3AI GATC 9 cut(s) 86, 165, 441, 514, 549, 783, 1539, 1749, 1755
Sau96I GGNCC 4 cut(s) 266, 278, 576, 1435
ScaI AGTACT 2 cut(s) 482, 1152
SchI GAGTC 3 cut(s) 101, 771, 1393
ScrFI CCNGG 5 cut(s) 574, 627, 628, 641, 642
SduI GDGCHC 2 cut(s) 1348, 1732
SfaNI GCATC 3 cut(s) 213, 411, 1594
SfcI CTRYAG 1 cut(s) 867
SinI GGWCC 1 cut(s) 576
SmaI CCCGGG 2 cut(s) 628, 642
SmiMI CAYNNNNRTG 1 cut(s) 510
SmlI CTYRAG 3 cut(s) 460, 1178, 1413
SmoI CTYRAG 3 cut(s) 460, 1178, 1413
SnaBI TACGTA 1 cut(s) 833
Sse9I AATT 5 cut(s) 472, 1027, 1131, 1290, 1579
SsiI CCGC 9 cut(s) 84, 347, 500, 527, 603, 649, 779, 810, 1692
SspMI CTAG 5 cut(s) 1037, 1314, 1467, 1682, 1733
SstI GAGCTC 1 cut(s) 1732
StyD4I CCNGG 5 cut(s) 572, 625, 626, 639, 640
TaaI ACNGT 5 cut(s) 181, 871, 1301, 1487, 1799
TaiI ACGT 4 cut(s) 751, 835, 1011, 1742
TaqI TCGA 5 cut(s) 164, 494, 552, 1059, 1329
TasI AATT 5 cut(s) 472, 1027, 1131, 1290, 1579
TatI WGTACW 4 cut(s) 480, 978, 1150, 1482
TauI GCSGC 3 cut(s) 350, 529, 605
TfiI GAWTC 8 cut(s) 4, 31, 114, 634, 1099, 1283, 1391, 1697
Tru1I TTAA 5 cut(s) 461, 618, 1593, 1766, 1809
Tru9I TTAA 5 cut(s) 461, 618, 1593, 1766, 1809
TscAI CASTG 6 cut(s) 186, 662, 876, 964, 1304, 1522
TseFI GTSAC 2 cut(s) 1618, 1714
TseI GCWGC 3 cut(s) 333, 651, 854
Tsp45I GTSAC 2 cut(s) 1618, 1714
TspDTI ATGAA 5 cut(s) 494, 790, 954, 1259, 1296
TspGWI ACGGA 1 cut(s) 1547
TspMI CCCGGG 2 cut(s) 626, 640
TspRI CASTG 6 cut(s) 186, 662, 876, 964, 1304, 1522
Van91I CCANNNNNTGG 2 cut(s) 661, 1445
Vha464I CTTAAG 1 cut(s) 460
VneI GTGCAC 1 cut(s) 1344
VpaK11BI GGWCC 1 cut(s) 576
XapI RAATTY 1 cut(s) 1579
XceI RCATGY 4 cut(s) 84, 617, 1165, 1352
XmaI CCCGGG 2 cut(s) 626, 640
XmnI GAANNNNTTC 5 cut(s) 669, 898, 991, 1266, 1390
XspI CTAG 5 cut(s) 1037, 1314, 1467, 1682, 1733
ZrmI AGTACT 2 cut(s) 482, 1152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.