Rroxscaffold_2G00130100

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
66241582 .. 66255671
14090 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00130100.1

Sequence Viewer

Length: 2904 bp
ATGGGAGTCATTCCATCATGGTTTGGCTCCTTATTTAAACTTCAAGTATTTAGTTTGTTTGGTAATCAATTTTCAGGTTCCATACCAGCTACAATCTTCAACATATCTGCTCTGCCAATAATTAGTCTGAGTTATAACCAACTCTCAGGTCCTATACCATATGAGATTGGTTATCTTCCAAATTTAGAGAAATTGGGGCTCAGTCAAAATAATCTAAATGGCCATATCCCATCCTCAATCTTCAATATCTCCACAATAAAAGTATTAGTTCTCAGCTTCAATCAGCTTTCAAGTAGCCTCCCAGCAAACATAGCCCTTGGGCTTCCAAACCTAGAAGAGTTTTATGCAACAGAGATTCGCTTCAGTGGAGTAATCTTCAAATCCATCTCCAACGCTTCTAAGCTTCAGATTCTAAGCCTGGGTGAGAACTCTTTTTCAGGTAGTCTTCGATTAGTCTTGAGGCTTAACAGCTTGACAGGTAGAATATCCAGAGAAATTGGAAACCTAACAATGTTGAAGGAGATCTACCTTAGTGGTAATAATTTTGAAGGTCCTATACCATATGAGATTGGTTATCTTCCAAATTTAGAGTGGTTGGTGCTCGGTGAAAATAATCTAAATGGCCATATCCCATCCTCAATCTTCAATATGTCCACAATAATAGGATTAGATCTCAACATCAATAAGCTTTCAGGTAGCTTCCCAGCAAACATAGGCCTTGCGCTTCCGAAACTAAAAGTGTTTGCAGTAGGAGGGAATCACCTCAGTGGAGTAATCCCCAAATCCATCTCTAATGCTTCTGAGCTTCGGCTTCTAGAACTGGGGGGTAACTCTTTTTCTGGATTTATTCCAAGCACTCTGTGCCTCTTGACAAACCTTGAATGGCTCTCATTGTTCGAGAATAATTTGACCATTGATGCCTCTACTCCAGAAGTTAATATTTTTTCTTGTCTGCCAAATCTTAGAAATTTGAGGGTTTTAGCCTTCTCAAGCAATCCATTAAATGCAAAGCCTTCGATTTCCTTCAGTAATTTCTCTGCATCACTTCAAAAACTTTATTTAGGAAATTGCAGCTTGAGAGGTAACATCCCTAGTGATATTGGGAATTTGAGTAGCTTGATCCTTTTAGGCCTGGGAGACAATCAATTGAGCGGGCCAATTCCAAGCTCAATGGGAAGACTACATAATCTTCAAGGTTTGGACATGACTGATAACACATTGCAAGGATACATTCTAGATGAGCTTTGTCAACTAGAAAAGTTAAGTGAATTGTATTTGGGTGGGAATCAACTCTCTGGTTCTGTACCTTCTTGCTTGGGTAATCTAACAGCATCTCTAAGAAAACTATACTTAGATTCCAATTTGTTGAATTCCACAATCCCATCTTCCTTGTGGGGACTTACAGATATCTTGGAACTAGACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGGTGCTGTTGGTAATTTGAAAGCTGCTGCATACATAAATGTATCATACAACCAATTATCTGGTAGTATACCAAGCAGCGTAGGGAGTTTATTGAAATTAATCAATCTCTCGTTGGCACATAATAATCTAGAAGGCCCTATTCCTAGTTCCTTTGCTACCTGCTTAAGCTTAGAACTGTTGGATTTATCTCAGAACAGTCTCTCTGGTGTGATTCCAAAGTCTCTTGAAGCACTCTCATATCTCAAGTACTTAAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAACCAGTGGTCCTTTCAAAAACTTCTCTGCTGAATCATTTGTTTCAAACCATGGACTCTGTGGTGGATCCCAATTTCAAGTTCCACCGTGCAAAAGAAAAACTAGTATATCTATCTTGAAATCTATTATTCCGGGGATCTTGTCAGCAATGCTTCTTGCGACCTCCATAATTTGGATGTTGATGTTACGTAGAAAAAAGAATGCAACAGCTGCAGCACATATTACCTTGACGCCTCAAGTTTTACGCAGAAGGGTTTCATACCAAGAGCTCCTATGTGCAACAGATGGATTCAATGAAAGCAACTTACTTGGTATTGGGGGTTTTGGCTCAGTATATAAAGGAACATTTCCAGATGAGACAGATGTTGCAATAAAGGTTTTCAATTTGGATTTAGAAGGGGCATTTGCAAGTTTTGAGGTTGAATGTGAAATGCTAAGTAATGTTCGTCACAGAAATCTTGTCAAAGTCATCAGTTGTTGTAGTCAAATTAATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGCATTCTCAGAATTCTTCTTTGGACTTGGTGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTACCTTCACCATGATTATGAAGTACCTATTGTCCATTGCGATTTGAAGCCGAGCAACATCTTACTAGATGATGATAAGGTTGCACATGTTGCTGATTTTGGTATTGCAAAACTCTTGGGTGGAGGAGATTCTATGACTCAAACCATGACCCTGGCCACAATTGGGTATATTGCTCCAGAGTATGGAATGGAAGGAATAGTGACCAGAAGAGGGGATGTGTATAGCTTCGGTATTGTAGTGATGGAAACATTTACAAGAAGGAAACCAACTGATGAGATCTTCATTGGGGAAATGAGATTAAGTCAATGGGTTGCAAATCACCTAGTTGCAAATGCGATAGTTGATGTTGTGGATGCTACTTTACTTGGAACCGAGGAGGATCATGAGTTCGTGAGCAAGAGGGAGTGCTTATCATCTATTATGAGAATAGCTGTTGCTTGTTCAGCAGAATCACCAGAAGAGAGGATAAACATGCAAGAGGCTGTAGCCATGCTTAAAACAATCAAGATCAAGTTTTCAAAGCAAACTGCAGCAGAAGACTGA

Protein Analysis

967

Amino Acids

104.98

Weight (kDa)

5.65

Isoelectric Point (pI)

36.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 243 - 303 1e-06 Leucine rich repeat
LRR_14 PF23598 348 - 472 2.9e-07 Leucine-rich repeat region
LRR_8 PF13855 518 - 576 2.3e-09 Leucine rich repeat
Pkinase PF00069 679 - 950 5.1e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 682 - 951 7.8e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 135
Acc36I ACCTGC 1 cut(s) 1622
AccB7I CCANNNNNTGG 3 cut(s) 1748, 1914, 2543
AccBSI CCGCTC 1 cut(s) 1152
AccI GTMKAC 1 cut(s) 1522
AciI CCGC 1 cut(s) 1152
AclWI GGATC 5 cut(s) 1114, 1803, 1816, 1886, 2748
AcoI YGGCCR 3 cut(s) 220, 622, 2514
AcsI RAATTY 8 cut(s) 181, 583, 967, 1105, 1369, 1708, 1737, 2299
AcuI CTGAAG 3 cut(s) 346, 389, 1009
AcyI GRCGYC 1 cut(s) 1973
AdeI CACNNNGTG 1 cut(s) 861
AfaI GTAC 4 cut(s) 1305, 1703, 2363, 2385
AfiI CCNNNNNNNGG 6 cut(s) 1454, 1748, 1914, 2523, 2543, 2571
AflII CTTAAG 1 cut(s) 1618
AflIII ACRYGT 1 cut(s) 2446
AhlI ACTAGT 1 cut(s) 1844
AjnI CCWGG 3 cut(s) 417, 1131, 2511
AjuI GAANNNNNNNTTGG 6 cut(s) 1722, 1754, 1806, 1838, 2291, 2323
AleI CACNNNNGTG 1 cut(s) 765
AloI GAACNNNNNNTCC 2 cut(s) 2732, 2764
Alw21I GWGCWC 2 cut(s) 603, 2013
Alw26I GTCTC 4 cut(s) 1131, 1658, 1680, 2093
AlwI GGATC 5 cut(s) 1114, 1803, 1816, 1886, 2748
AlwNI CAGNNNCTG 1 cut(s) 1460
AoxI GGCC 7 cut(s) 220, 622, 715, 1129, 1154, 1588, 2514
ApeKI GCWGC 7 cut(s) 1071, 1478, 1481, 1530, 1952, 1955, 2891
ApoI RAATTY 8 cut(s) 181, 583, 967, 1105, 1369, 1708, 1737, 2299
AseI ATTAAT 2 cut(s) 1553, 2232
Asp700I GAANNNNTTC 1 cut(s) 1996
AspLEI GCGC 1 cut(s) 724
AspS9I GGNCC 6 cut(s) 149, 551, 1154, 1445, 1589, 1751
AsuC2I CCSGG 1 cut(s) 1875
AsuHPI GGTGA 6 cut(s) 434, 617, 752, 2360, 2672, 2805
AvaII GGWCC 4 cut(s) 149, 551, 1445, 1751
BalI TGGCCA 3 cut(s) 222, 624, 2516
BamHI GGATCC 1 cut(s) 1808
BanII GRGCYC 2 cut(s) 201, 2013
BarI GAAGNNNNNNTAC 4 cut(s) 509, 540, 541, 572
BbsI GAAGAC 2 cut(s) 437, 1183
Bbv12I GWGCWC 2 cut(s) 603, 2013
BbvI GCAGC 6 cut(s) 1083, 1465, 1468, 1542, 1939, 1967
BccI CCATC 8 cut(s) 22, 238, 392, 640, 794, 1390, 2021, 2596
BcgI CGANNNNNNTGC 2 cut(s) 996, 1030
BciT130I CCWGG 3 cut(s) 419, 1133, 2513
BciVI GTATCC 1 cut(s) 1220
BcnI CCSGG 1 cut(s) 1875
BcoDI GTCTC 4 cut(s) 1131, 1658, 1680, 2093
BcuI ACTAGT 1 cut(s) 1844
BfmI CTRYAG 3 cut(s) 1953, 2844, 2889
BfrI CTTAAG 1 cut(s) 1618
BfuAI ACCTGC 1 cut(s) 1622
BfuI GTATCC 1 cut(s) 1220
BglII AGATCT 3 cut(s) 522, 670, 2637
BisI GCNGC 7 cut(s) 1072, 1479, 1482, 1531, 1953, 1956, 2892
BlsI GCNGC 7 cut(s) 1073, 1480, 1483, 1532, 1954, 1957, 2893
BmcAI AGTACT 1 cut(s) 1703
Bme1390I CCNGG 4 cut(s) 419, 1133, 1875, 2513
Bme18I GGWCC 4 cut(s) 149, 551, 1445, 1751
BmgT120I GGNCC 6 cut(s) 149, 551, 1154, 1445, 1589, 1751
BmiI GGNNCC 5 cut(s) 28, 79, 1810, 2273, 2731
BmrFI CCNGG 4 cut(s) 419, 1133, 1875, 2513
BmrI ACTGGG 1 cut(s) 830
BmsI GCATC 5 cut(s) 907, 1049, 1340, 2357, 2704
BmuI ACTGGG 1 cut(s) 830
BpiI GAAGAC 2 cut(s) 437, 1183
BpmI CTGGAG 2 cut(s) 912, 2520
BpuEI CTTGAG 6 cut(s) 478, 973, 1096, 1682, 1962, 2297
BpuMI CCSGG 1 cut(s) 1875
BsaAI YACGTR 1 cut(s) 1931
BsaHI GRCGYC 1 cut(s) 1973
BsaJI CCNNGG 8 cut(s) 316, 418, 1132, 1729, 1792, 1874, 2511, 2733
Bsc4I CCNNNNNNNGG 6 cut(s) 1454, 1748, 1914, 2523, 2543, 2571
Bse1I ACTGG 2 cut(s) 825, 1746
Bse3DI GCAATG 3 cut(s) 1217, 1896, 2395
BseBI CCWGG 3 cut(s) 419, 1133, 2513
BseDI CCNNGG 8 cut(s) 316, 418, 1132, 1729, 1792, 1874, 2511, 2733
BseGI GGATG 7 cut(s) 230, 632, 1086, 1427, 1923, 2581, 2719
BseLI CCNNNNNNNGG 6 cut(s) 1454, 1748, 1914, 2523, 2543, 2571
BseMI GCAATG 3 cut(s) 1217, 1896, 2395
BseMII CTCAG 9 cut(s) 119, 159, 214, 286, 778, 792, 1658, 2085, 2309
BseNI ACTGG 2 cut(s) 825, 1746
BseRI GAGGAG 2 cut(s) 2499, 2750
BseXI GCAGC 6 cut(s) 1083, 1465, 1468, 1542, 1939, 1967
BseYI CCCAGC 2 cut(s) 301, 703
BsgI GTGCAG 1 cut(s) 2339
BshFI GGCC 7 cut(s) 222, 624, 717, 1131, 1156, 1590, 2516
BsiHKAI GWGCWC 2 cut(s) 603, 2013
BsiSI CCGG 1 cut(s) 1874
BslFI GGGAC 1 cut(s) 1410
BslI CCNNNNNNNGG 6 cut(s) 1454, 1748, 1914, 2523, 2543, 2571
BsmAI GTCTC 4 cut(s) 1131, 1658, 1680, 2093
BsmFI GGGAC 1 cut(s) 1410
BsmI GAATGC 2 cut(s) 1948, 2290
BsnI GGCC 7 cut(s) 222, 624, 717, 1131, 1156, 1590, 2516
Bsp1286I GDGCHC 3 cut(s) 201, 603, 2013
Bsp143I GATC 8 cut(s) 522, 670, 1119, 1808, 1878, 2637, 2740, 2868
Bsp19I CCATGG 1 cut(s) 1792
BspACI CCGC 1 cut(s) 1152
BspANI GGCC 7 cut(s) 222, 624, 717, 1131, 1156, 1590, 2516
BspCNI CTCAG 9 cut(s) 120, 158, 213, 285, 777, 793, 1657, 2084, 2308
BspHI TCATGA 1 cut(s) 2743
BspLI GGNNCC 5 cut(s) 28, 79, 1810, 2273, 2731
BspMAI CTGCAG 2 cut(s) 1957, 2893
BspMI ACCTGC 1 cut(s) 1622
BspPI GGATC 5 cut(s) 1114, 1803, 1816, 1886, 2748
BspTI CTTAAG 1 cut(s) 1618
BsrBI CCGCTC 1 cut(s) 1152
BsrDI GCAATG 3 cut(s) 1217, 1896, 2395
BsrI ACTGG 2 cut(s) 825, 1746
BssECI CCNNGG 8 cut(s) 316, 418, 1132, 1729, 1792, 1874, 2511, 2733
BssMI GATC 8 cut(s) 522, 670, 1119, 1808, 1878, 2637, 2740, 2868
BssNAI GTATAC 1 cut(s) 1523
BssNI GRCGYC 1 cut(s) 1973
BssT1I CCWWGG 3 cut(s) 316, 1729, 1792
Bst1107I GTATAC 1 cut(s) 1523
Bst2UI CCWGG 3 cut(s) 419, 1133, 2513
Bst4CI ACNGT 3 cut(s) 1632, 1652, 1830
Bst6I CTCTTC 3 cut(s) 330, 2563, 2814
BstACI GRCGYC 1 cut(s) 1973
BstAFI CTTAAG 1 cut(s) 1618
BstAPI GCANNNNNTGC 3 cut(s) 861, 1952, 2450
BstBAI YACGTR 1 cut(s) 1931
BstC8I GCNNGC 1 cut(s) 1154
BstDSI CCRYGG 1 cut(s) 1792
BstENI CCTNNNNNAGG 1 cut(s) 1452
BstF5I GGATG 7 cut(s) 230, 632, 1086, 1427, 1923, 2581, 2719
BstHHI GCGC 1 cut(s) 724
BstKTI GATC 8 cut(s) 525, 673, 1122, 1811, 1881, 2640, 2743, 2871
BstMAI GTCTC 4 cut(s) 1131, 1658, 1680, 2093
BstMBI GATC 8 cut(s) 522, 670, 1119, 1808, 1878, 2637, 2740, 2868
BstMWI GCNNNNNNNGC 5 cut(s) 311, 861, 1952, 2450, 2804
BstNI CCWGG 3 cut(s) 419, 1133, 2513
BstNSI RCATGY 3 cut(s) 2263, 2450, 2836
BstSCI CCNGG 4 cut(s) 417, 1131, 1873, 2511
BstSFI CTRYAG 3 cut(s) 1953, 2844, 2889
BstSNI TACGTA 1 cut(s) 1931
BstV1I GCAGC 6 cut(s) 1083, 1465, 1468, 1542, 1939, 1967
BstV2I GAAGAC 2 cut(s) 437, 1183
BstX2I RGATCY 5 cut(s) 522, 670, 1808, 1878, 2637
BstXI CCANNNNNNTGG 2 cut(s) 1514, 2512
BstYI RGATCY 5 cut(s) 522, 670, 1808, 1878, 2637
BstZ17I GTATAC 1 cut(s) 1523
BsuI GTATCC 1 cut(s) 1220
BsuRI GGCC 7 cut(s) 222, 624, 717, 1131, 1156, 1590, 2516
BtgI CCRYGG 1 cut(s) 1792
BtsCI GGATG 7 cut(s) 230, 632, 1086, 1427, 1923, 2581, 2719
BtsIMutI CAGTG 3 cut(s) 370, 772, 1753
BveI ACCTGC 1 cut(s) 1622
Cac8I GCNNGC 1 cut(s) 1154
CaiI CAGNNNCTG 1 cut(s) 1460
CciI TCATGA 1 cut(s) 2743
CfoI GCGC 1 cut(s) 724
Cfr13I GGNCC 6 cut(s) 149, 551, 1154, 1445, 1589, 1751
CseI GACGC 1 cut(s) 1981
Csp6I GTAC 4 cut(s) 1304, 1702, 2362, 2384
CviQI GTAC 4 cut(s) 1304, 1702, 2362, 2384
DpnI GATC 8 cut(s) 524, 672, 1121, 1810, 1880, 2639, 2742, 2870
DpnII GATC 8 cut(s) 522, 670, 1119, 1808, 1878, 2637, 2740, 2868
DraI TTTAAA 1 cut(s) 37
DraIII CACNNNGTG 1 cut(s) 861
EaeI YGGCCR 3 cut(s) 220, 622, 2514
Eam1104I CTCTTC 3 cut(s) 330, 2563, 2814
EarI CTCTTC 3 cut(s) 330, 2563, 2814
Ecl136II GAGCTC 1 cut(s) 2011
Eco105I TACGTA 1 cut(s) 1931
Eco130I CCWWGG 3 cut(s) 316, 1729, 1792
Eco147I AGGCCT 2 cut(s) 717, 1131
Eco24I GRGCYC 2 cut(s) 201, 2013
Eco32I GATATC 1 cut(s) 1408
Eco47I GGWCC 4 cut(s) 149, 551, 1445, 1751
Eco53kI GAGCTC 1 cut(s) 2011
Eco57I CTGAAG 3 cut(s) 346, 389, 1009
EcoICRI GAGCTC 1 cut(s) 2011
EcoNI CCTNNNNNAGG 1 cut(s) 1452
EcoO109I RGGNCCY 3 cut(s) 149, 551, 1589
EcoRI GAATTC 2 cut(s) 1369, 2299
EcoRII CCWGG 3 cut(s) 417, 1131, 2511
EcoRV GATATC 1 cut(s) 1408
EcoT14I CCWWGG 3 cut(s) 316, 1729, 1792
EcoT38I GRGCYC 2 cut(s) 201, 2013
ErhI CCWWGG 3 cut(s) 316, 1729, 1792
FaqI GGGAC 1 cut(s) 1410
FauI CCCGC 1 cut(s) 1145
FauNDI CATATG 2 cut(s) 160, 562
FblI GTMKAC 1 cut(s) 1522
Fnu4HI GCNGC 7 cut(s) 1072, 1479, 1482, 1531, 1953, 1956, 2892
FokI GGATG 7 cut(s) 217, 619, 1073, 1414, 1930, 2588, 2726
FriOI GRGCYC 2 cut(s) 201, 2013
Fsp4HI GCNGC 7 cut(s) 1072, 1479, 1482, 1531, 1953, 1956, 2892
GlaI GCGC 1 cut(s) 723
GluI GCNGC 7 cut(s) 1072, 1479, 1482, 1531, 1953, 1956, 2892
GsaI CCCAGC 2 cut(s) 305, 707
GsuI CTGGAG 2 cut(s) 912, 2520
HaeIII GGCC 7 cut(s) 222, 624, 717, 1131, 1156, 1590, 2516
HapII CCGG 1 cut(s) 1874
HgaI GACGC 1 cut(s) 1981
HhaI GCGC 1 cut(s) 724
Hin1I GRCGYC 1 cut(s) 1973
Hin6I GCGC 1 cut(s) 722
HinP1I GCGC 1 cut(s) 722
HincII GTYRAC 1 cut(s) 1250
HindII GTYRAC 1 cut(s) 1250
HindIII AAGCTT 3 cut(s) 401, 686, 1621
HpaII CCGG 1 cut(s) 1874
HphI GGTGA 6 cut(s) 434, 617, 752, 2360, 2672, 2805
Hpy166II GTNNAC 3 cut(s) 654, 1250, 1523
Hpy188I TCNGA 6 cut(s) 129, 408, 729, 802, 1647, 2298
Hpy8I GTNNAC 3 cut(s) 654, 1250, 1523
HpyCH4III ACNGT 3 cut(s) 1632, 1652, 1830
HpyCH4IV ACGT 1 cut(s) 1930
HpyF10VI GCNNNNNNNGC 5 cut(s) 311, 861, 1952, 2450, 2804
HpySE526I ACGT 1 cut(s) 1930
Hsp92I GRCGYC 1 cut(s) 1973
HspAI GCGC 1 cut(s) 722
Kzo9I GATC 8 cut(s) 522, 670, 1119, 1808, 1878, 2637, 2740, 2868
LmnI GCTCC 4 cut(s) 32, 2016, 2271, 2539
Lsp1109I GCAGC 6 cut(s) 1083, 1465, 1468, 1542, 1939, 1967
LweI GCATC 5 cut(s) 907, 1049, 1340, 2357, 2704
MaeII ACGT 1 cut(s) 1930
MaeIII GTNAC 5 cut(s) 827, 1082, 1926, 2189, 2560
MalI GATC 8 cut(s) 524, 672, 1121, 1810, 1880, 2639, 2742, 2870
MbiI CCGCTC 1 cut(s) 1152
MboI GATC 8 cut(s) 522, 670, 1119, 1808, 1878, 2637, 2740, 2868
MfeI CAATTG 2 cut(s) 1145, 2520
MflI RGATCY 5 cut(s) 522, 670, 1808, 1878, 2637
MhlI GDGCHC 3 cut(s) 201, 603, 2013
MlsI TGGCCA 3 cut(s) 222, 624, 2516
MluNI TGGCCA 3 cut(s) 222, 624, 2516
MlyI GAGTC 4 cut(s) 15, 1719, 1791, 2491
MmeI TCCRAC 4 cut(s) 414, 1614, 1766, 2307
Mox20I TGGCCA 3 cut(s) 222, 624, 2516
MroXI GAANNNNTTC 1 cut(s) 1996
MscI TGGCCA 3 cut(s) 222, 624, 2516
MslI CAYNNNNRTG 2 cut(s) 765, 2376
Msp20I TGGCCA 3 cut(s) 222, 624, 2516
MspA1I CMGCKG 1 cut(s) 1952
MspCI CTTAAG 1 cut(s) 1618
MspI CCGG 1 cut(s) 1874
MspR9I CCNGG 4 cut(s) 419, 1133, 1875, 2513
MunI CAATTG 2 cut(s) 1145, 2520
Mva1269I GAATGC 2 cut(s) 1948, 2290
MvaI CCWGG 3 cut(s) 419, 1133, 2513
MwoI GCNNNNNNNGC 5 cut(s) 311, 861, 1952, 2450, 2804
NciI CCSGG 1 cut(s) 1875
NcoI CCATGG 1 cut(s) 1792
NdeI CATATG 2 cut(s) 160, 562
NdeII GATC 8 cut(s) 522, 670, 1119, 1808, 1878, 2637, 2740, 2868
NlaIV GGNNCC 5 cut(s) 28, 79, 1810, 2273, 2731
NmeAIII GCCGAG 1 cut(s) 2436
NmuCI GTSAC 2 cut(s) 2189, 2560
NspI RCATGY 3 cut(s) 2263, 2450, 2836
OliI CACNNNNGTG 1 cut(s) 765
PagI TCATGA 1 cut(s) 2743
PceI AGGCCT 2 cut(s) 717, 1131
PciI ACATGT 1 cut(s) 2446
PctI GAATGC 2 cut(s) 1948, 2290
PdmI GAANNNNTTC 1 cut(s) 1996
PflMI CCANNNNNTGG 3 cut(s) 1748, 1914, 2543
PkrI GCNGC 7 cut(s) 1073, 1480, 1483, 1532, 1954, 1957, 2893
PleI GAGTC 4 cut(s) 14, 1719, 1791, 2491
PpsI GAGTC 4 cut(s) 14, 1719, 1791, 2491
Ppu21I YACGTR 1 cut(s) 1931
PpuMI RGGWCCY 2 cut(s) 149, 551
PscI ACATGT 1 cut(s) 2446
PshBI ATTAAT 2 cut(s) 1553, 2232
PsiI TTATAA 1 cut(s) 135
Psp124BI GAGCTC 1 cut(s) 2013
Psp5II RGGWCCY 2 cut(s) 149, 551
Psp6I CCWGG 3 cut(s) 417, 1131, 2511
PspFI CCCAGC 2 cut(s) 301, 703
PspGI CCWGG 3 cut(s) 417, 1131, 2511
PspN4I GGNNCC 5 cut(s) 28, 79, 1810, 2273, 2731
PspPI GGNCC 6 cut(s) 149, 551, 1154, 1445, 1589, 1751
PspPPI RGGWCCY 2 cut(s) 149, 551
PstI CTGCAG 2 cut(s) 1957, 2893
PstNI CAGNNNCTG 1 cut(s) 1460
PsuI RGATCY 5 cut(s) 522, 670, 1808, 1878, 2637
PvuII CAGCTG 1 cut(s) 1952
RsaI GTAC 4 cut(s) 1305, 1703, 2363, 2385
RsaNI GTAC 4 cut(s) 1304, 1702, 2362, 2384
RseI CAYNNNNRTG 2 cut(s) 765, 2376
SacI GAGCTC 1 cut(s) 2013
SatI GCNGC 7 cut(s) 1072, 1479, 1482, 1531, 1953, 1956, 2892
Sau3AI GATC 8 cut(s) 522, 670, 1119, 1808, 1878, 2637, 2740, 2868
Sau96I GGNCC 6 cut(s) 149, 551, 1154, 1445, 1589, 1751
ScaI AGTACT 1 cut(s) 1703
SchI GAGTC 4 cut(s) 15, 1719, 1791, 2491
ScrFI CCNGG 4 cut(s) 419, 1133, 1875, 2513
SduI GDGCHC 3 cut(s) 201, 603, 2013
SfaNI GCATC 5 cut(s) 907, 1049, 1340, 2357, 2704
SfcI CTRYAG 3 cut(s) 1953, 2844, 2889
SinI GGWCC 4 cut(s) 149, 551, 1445, 1751
SmiMI CAYNNNNRTG 2 cut(s) 765, 2376
SmlI CTYRAG 7 cut(s) 457, 988, 1075, 1618, 1697, 1977, 2276
SmoI CTYRAG 7 cut(s) 457, 988, 1075, 1618, 1697, 1977, 2276
SnaBI TACGTA 1 cut(s) 1931
SpeI ACTAGT 1 cut(s) 1844
SseBI AGGCCT 2 cut(s) 717, 1131
SsiI CCGC 1 cut(s) 1152
SspI AATATT 1 cut(s) 940
SstI GAGCTC 1 cut(s) 2013
StuI AGGCCT 2 cut(s) 717, 1131
StyD4I CCNGG 4 cut(s) 417, 1131, 1873, 2511
StyI CCWWGG 3 cut(s) 316, 1729, 1792
TaaI ACNGT 3 cut(s) 1632, 1652, 1830
TaiI ACGT 1 cut(s) 1933
TaqI TCGA 3 cut(s) 448, 897, 1016
TatI WGTACW 1 cut(s) 1701
TscAI CASTG 3 cut(s) 370, 772, 1753
TseFI GTSAC 2 cut(s) 2189, 2560
TseI GCWGC 7 cut(s) 1071, 1478, 1481, 1530, 1952, 1955, 2891
Tsp45I GTSAC 2 cut(s) 2189, 2560
TspDTI ATGAA 4 cut(s) 1989, 2052, 2394, 2632
TspRI CASTG 3 cut(s) 370, 772, 1753
Van91I CCANNNNNTGG 3 cut(s) 1748, 1914, 2543
Vha464I CTTAAG 1 cut(s) 1618
VpaK11BI GGWCC 4 cut(s) 149, 551, 1445, 1751
VspI ATTAAT 2 cut(s) 1553, 2232
XagI CCTNNNNNAGG 1 cut(s) 1452
XapI RAATTY 8 cut(s) 181, 583, 967, 1105, 1369, 1708, 1737, 2299
XbaI TCTAGA 3 cut(s) 814, 1234, 1582
XceI RCATGY 3 cut(s) 2263, 2450, 2836
XcmI CCANNNNNNNNNTGG 3 cut(s) 588, 1389, 1799
XmiI GTMKAC 1 cut(s) 1522
XmnI GAANNNNTTC 1 cut(s) 1996
ZrmI AGTACT 1 cut(s) 1703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.