Rorug04G0454000

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
60796143 .. 60799674
3532 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0454000.1

Sequence Viewer

Length: 1239 bp
ATGGCAGCCCCCGCGACGACGAGCGTGGTGCCCCTGAACCGAACCAGGCGGGGCGGCGGCATGGTCAACGAGGACAAGCTCGAGTTCGTCACATCCGACGGCATAGAGCCCATCATGAGCTTCGATCAGATGGGCATCAAGGACGATCTCCTCCGCGGTATTTACAACTACGGCTTCGAGAAGCCCTCCGCCATCCAGCAACGGGCCGTCCGGCCCATCATTGAGGGCCGTGACGTCATTGCCCAGGCCCAGTCCGGTACCGGAAAGACCTCCATGATTGCCCTCACCGTCTGCCAAATCGTCGACACCTCCTCCAGAGAGGTTCAGGCGTTGATACTGTCTCCGACGAGGGAATTGGCGGCGCAGACGGAGAAGGTGATATTGGCAATTGGTAATTACATAAATATCCAAGCGCATTCTTGCATTGGAGGCAAAAGCGTCGGTGAGGATATTAGAAAGCTCGAGTATGGAGTTCATGTGGTGTCTGGAACTCCCGGTAGAGTCTGTGATATGATCAAGAGGAGAACTCTGCGCACTCGAGCCATTAAATTATTGATTCTCGATGAGTCTGATGAAATGTTGAGCAGAGGCTTCAAGGATCAGATTTATGATGTGTACAGATATCTTCCACCCGAGCTCCAGGTCTGCTTGATTTCGGCTACACTTCCCCATGAAATTTTGGAGATAACTAGCAAGTTTATGACTGAGCCCGTAAGGATCCTGGTTAAACGTGATGAGTTGACTTTGGAGGGGATCAAGCAATTTTTTGTTGCAGTTGAAAGAGAAGAGTGGAAGTTTGATACTTTATGTGATCTTTATGATACTCTTACAATTACACAAGCTGTTATTTTCTGCAACACAAAGAGAAAGGTGGACTGGCTGACTGAAAAGATGCGATCTAATAACTTTACAGTCTCTGCAATGCATGGAGACATGCCTCAGAAGGAGCGAGATGCTATTATGAATGAGTTCAGAAATGGTACTACTCGTGTTTTGATCACAACAGATGTTTGGGCCAGGGGCCTTGATGTTCAGCAGGTGTCTTTGGTTATCAATTATGATCTTCCAAACAATCGAGAGCTATACATTCATCGAATTGGTCGTTCTGGTCGTTTTGGACGCAAGGGTGTGGCGATAAACTTTGTCAAAAGCGACGATATCAAGATTTTAAGAGACATTGAACAGTACTACAGTACCCAGATTGACGAAATGCCAATGAATGTCGCAGATTTAATATAA

Protein Analysis

412

Amino Acids

46.69

Weight (kDa)

6.29

Isoelectric Point (pI)

40.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 64 - 227 7.2e-43 DEAD/DEAH box helicase
Helicase_C PF00271 265 - 373 8.5e-36 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1027
AatII GACGTC 1 cut(s) 237
Acc16I TGCGCA 1 cut(s) 533
Acc36I ACCTGC 1 cut(s) 1027
Acc65I GGTACC 1 cut(s) 257
AccB1I GGYRCC 2 cut(s) 28, 257
AccI GTMKAC 1 cut(s) 303
AccII CGCG 2 cut(s) 14, 156
AciI CCGC 8 cut(s) 12, 49, 54, 57, 154, 156, 189, 359
AclWI GGATC 4 cut(s) 606, 712, 725, 761
AcsI RAATTY 1 cut(s) 675
AcyI GRCGYC 1 cut(s) 234
AfaI GTAC 5 cut(s) 259, 617, 982, 1187, 1195
AfiI CCNNNNNNNGG 1 cut(s) 202
AgsI TTSAA 3 cut(s) 595, 779, 1181
AjnI CCWGG 5 cut(s) 44, 243, 639, 720, 1016
AjuI GAANNNNNNNTTGG 2 cut(s) 365, 397
AluBI AGCT 6 cut(s) 79, 120, 460, 637, 842, 1081
AluI AGCT 6 cut(s) 79, 120, 460, 637, 842, 1081
Alw21I GWGCWC 1 cut(s) 639
Alw26I GTCTC 4 cut(s) 345, 919, 924, 1167
AlwI GGATC 4 cut(s) 606, 712, 725, 761
AlwNI CAGNNNCTG 1 cut(s) 917
Ama87I CYCGRG 4 cut(s) 80, 461, 537, 632
AoxI GGCC 6 cut(s) 204, 212, 226, 246, 1014, 1021
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 675
Asp700I GAANNNNTTC 1 cut(s) 968
Asp718I GGTACC 1 cut(s) 257
AspLEI GCGC 3 cut(s) 364, 415, 534
AspS9I GGNCC 6 cut(s) 204, 213, 226, 247, 1014, 1021
AsuC2I CCSGG 1 cut(s) 495
AsuHPI GGTGA 3 cut(s) 277, 388, 455
AvaI CYCGRG 4 cut(s) 80, 461, 537, 632
BaeGI GKGCMC 1 cut(s) 33
BaeI ACNNNNGTAYC 2 cut(s) 1177, 1210
BamHI GGATCC 1 cut(s) 717
BanI GGYRCC 2 cut(s) 28, 257
BanII GRGCYC 3 cut(s) 111, 639, 711
BauI CACGAG 1 cut(s) 987
Bbv12I GWGCWC 1 cut(s) 639
BbvI GCAGC 1 cut(s) 17
BccI CCATC 4 cut(s) 119, 124, 200, 224
BceAI ACGGC 4 cut(s) 115, 187, 191, 213
BcgI CGANNNNNNTGC 4 cut(s) 10, 44, 421, 455
BciT130I CCWGG 5 cut(s) 46, 245, 641, 722, 1018
BclI TGATCA 2 cut(s) 513, 996
BcnI CCSGG 1 cut(s) 495
BcoDI GTCTC 4 cut(s) 345, 919, 924, 1167
BfaI CTAG 1 cut(s) 690
BfmI CTRYAG 1 cut(s) 1189
BfuAI ACCTGC 1 cut(s) 1027
BisI GCNGC 4 cut(s) 6, 55, 58, 360
BlsI GCNGC 4 cut(s) 7, 56, 59, 361
BmcAI AGTACT 1 cut(s) 1187
Bme1390I CCNGG 6 cut(s) 46, 245, 495, 641, 722, 1018
BmeT110I CYCGRG 4 cut(s) 80, 461, 537, 632
BmgT120I GGNCC 6 cut(s) 204, 213, 226, 247, 1014, 1021
BmiI GGNNCC 4 cut(s) 30, 259, 719, 1022
BmrFI CCNGG 6 cut(s) 46, 245, 495, 641, 722, 1018
BmrI ACTGGG 1 cut(s) 244
BmsI GCATC 3 cut(s) 144, 882, 943
BmuI ACTGGG 1 cut(s) 244
BplI GAGNNNNNCTC 4 cut(s) 170, 202, 511, 543
BpmI CTGGAG 2 cut(s) 298, 623
BpuMI CCSGG 1 cut(s) 495
BsaBI GATNNNNATC 1 cut(s) 134
BsaHI GRCGYC 1 cut(s) 234
BsaJI CCNNGG 3 cut(s) 154, 243, 1017
BsaWI WCCGGW 2 cut(s) 254, 260
BsaXI ACNNNNNCTCC 6 cut(s) 296, 326, 462, 492, 621, 651
Bsc4I CCNNNNNNNGG 1 cut(s) 202
Bse1I ACTGG 2 cut(s) 250, 881
Bse3DI GCAATG 2 cut(s) 237, 927
Bse8I GATNNNNATC 1 cut(s) 134
BseBI CCWGG 5 cut(s) 46, 245, 641, 722, 1018
BseDI CCNNGG 3 cut(s) 154, 243, 1017
BseGI GGATG 2 cut(s) 92, 192
BseJI GATNNNNATC 1 cut(s) 134
BseLI CCNNNNNNNGG 1 cut(s) 202
BseMI GCAATG 2 cut(s) 237, 927
BseMII CTCAG 2 cut(s) 696, 953
BseNI ACTGG 2 cut(s) 250, 881
BseRI GAGGAG 3 cut(s) 140, 301, 535
BseSI GKGCMC 1 cut(s) 33
BseXI GCAGC 1 cut(s) 17
Bsh1236I CGCG 2 cut(s) 14, 156
BshFI GGCC 6 cut(s) 206, 214, 228, 248, 1016, 1023
BshNI GGYRCC 2 cut(s) 28, 257
BsiHKAI GWGCWC 1 cut(s) 639
BsiHKCI CYCGRG 4 cut(s) 80, 461, 537, 632
BsiSI CCGG 4 cut(s) 211, 255, 261, 495
BslI CCNNNNNNNGG 1 cut(s) 202
BsmAI GTCTC 4 cut(s) 345, 919, 924, 1167
BsmI GAATGC 1 cut(s) 415
BsnI GGCC 6 cut(s) 206, 214, 228, 248, 1016, 1023
BsoBI CYCGRG 4 cut(s) 80, 461, 537, 632
Bsp1286I GDGCHC 4 cut(s) 33, 111, 639, 711
Bsp1407I TGTACA 1 cut(s) 615
BspACI CCGC 8 cut(s) 12, 49, 54, 57, 154, 156, 189, 359
BspANI GGCC 6 cut(s) 206, 214, 228, 248, 1016, 1023
BspCNI CTCAG 2 cut(s) 697, 952
BspFNI CGCG 2 cut(s) 14, 156
BspHI TCATGA 1 cut(s) 114
BspLI GGNNCC 4 cut(s) 30, 259, 719, 1022
BspMI ACCTGC 1 cut(s) 1027
BspPI GGATC 4 cut(s) 606, 712, 725, 761
BspT107I GGYRCC 2 cut(s) 28, 257
BsrDI GCAATG 2 cut(s) 237, 927
BsrGI TGTACA 1 cut(s) 615
BsrI ACTGG 2 cut(s) 250, 881
BssECI CCNNGG 3 cut(s) 154, 243, 1017
BssNI GRCGYC 1 cut(s) 234
BssSI CACGAG 1 cut(s) 987
Bst2BI CACGAG 1 cut(s) 987
Bst2UI CCWGG 5 cut(s) 46, 245, 641, 722, 1018
Bst4CI ACNGT 5 cut(s) 289, 339, 913, 1185, 1193
Bst6I CTCTTC 1 cut(s) 780
BstACI GRCGYC 1 cut(s) 234
BstAUI TGTACA 1 cut(s) 615
BstDEI CTNAG 2 cut(s) 705, 939
BstDSI CCRYGG 1 cut(s) 154
BstF5I GGATG 2 cut(s) 92, 192
BstFNI CGCG 2 cut(s) 14, 156
BstHHI GCGC 3 cut(s) 364, 415, 534
BstMAI GTCTC 4 cut(s) 345, 919, 924, 1167
BstMWI GCNNNNNNNGC 2 cut(s) 11, 429
BstNI CCWGG 5 cut(s) 46, 245, 641, 722, 1018
BstNSI RCATGY 1 cut(s) 937
BstSCI CCNGG 6 cut(s) 44, 243, 493, 639, 720, 1016
BstSFI CTRYAG 1 cut(s) 1189
BstSLI GKGCMC 1 cut(s) 33
BstUI CGCG 2 cut(s) 14, 156
BstV1I GCAGC 1 cut(s) 17
BstX2I RGATCY 1 cut(s) 717
BstYI RGATCY 1 cut(s) 717
BsuRI GGCC 6 cut(s) 206, 214, 228, 248, 1016, 1023
BtgI CCRYGG 1 cut(s) 154
BtsCI GGATG 2 cut(s) 92, 192
BveI ACCTGC 1 cut(s) 1027
CaiI CAGNNNCTG 1 cut(s) 917
CciI TCATGA 1 cut(s) 114
CfoI GCGC 3 cut(s) 364, 415, 534
Cfr13I GGNCC 6 cut(s) 204, 213, 226, 247, 1014, 1021
Cfr42I CCGCGG 1 cut(s) 157
CseI GACGC 2 cut(s) 427, 1128
Csp6I GTAC 5 cut(s) 258, 616, 981, 1186, 1194
CviAII CATG 7 cut(s) 61, 115, 274, 476, 671, 926, 934
CviQI GTAC 5 cut(s) 258, 616, 981, 1186, 1194
DdeI CTNAG 2 cut(s) 705, 939
Eam1104I CTCTTC 1 cut(s) 780
EarI CTCTTC 1 cut(s) 780
EciI GGCGGA 1 cut(s) 178
Ecl136II GAGCTC 1 cut(s) 637
Eco24I GRGCYC 3 cut(s) 111, 639, 711
Eco32I GATATC 2 cut(s) 623, 1159
Eco53kI GAGCTC 1 cut(s) 637
Eco88I CYCGRG 4 cut(s) 80, 461, 537, 632
EcoICRI GAGCTC 1 cut(s) 637
EcoO109I RGGNCCY 1 cut(s) 1021
EcoRII CCWGG 5 cut(s) 44, 243, 639, 720, 1016
EcoRV GATATC 2 cut(s) 623, 1159
EcoT22I ATGCAT 1 cut(s) 927
EcoT38I GRGCYC 3 cut(s) 111, 639, 711
FaeI CATG 7 cut(s) 64, 118, 277, 479, 674, 929, 937
FatI CATG 7 cut(s) 60, 114, 273, 475, 670, 925, 933
FauI CCCGC 2 cut(s) 19, 42
FbaI TGATCA 2 cut(s) 513, 996
FblI GTMKAC 1 cut(s) 303
Fnu4HI GCNGC 4 cut(s) 6, 55, 58, 360
FokI GGATG 2 cut(s) 79, 179
FriOI GRGCYC 3 cut(s) 111, 639, 711
Fsp4HI GCNGC 4 cut(s) 6, 55, 58, 360
FspBI CTAG 1 cut(s) 690
FspI TGCGCA 1 cut(s) 533
GlaI GCGC 3 cut(s) 363, 414, 533
GluI GCNGC 4 cut(s) 6, 55, 58, 360
GsuI CTGGAG 2 cut(s) 298, 623
HaeIII GGCC 6 cut(s) 206, 214, 228, 248, 1016, 1023
HapII CCGG 4 cut(s) 211, 255, 261, 495
HgaI GACGC 2 cut(s) 427, 1128
HhaI GCGC 3 cut(s) 364, 415, 534
Hin1I GRCGYC 1 cut(s) 234
Hin1II CATG 7 cut(s) 64, 118, 277, 479, 674, 929, 937
Hin6I GCGC 3 cut(s) 362, 413, 532
HinP1I GCGC 3 cut(s) 362, 413, 532
HincII GTYRAC 3 cut(s) 67, 304, 741
HindII GTYRAC 3 cut(s) 67, 304, 741
HinfI GANTC 3 cut(s) 501, 556, 566
HpaII CCGG 4 cut(s) 211, 255, 261, 495
HphI GGTGA 3 cut(s) 277, 388, 455
Hpy166II GTNNAC 5 cut(s) 67, 304, 616, 741, 874
Hpy188I TCNGA 7 cut(s) 97, 129, 345, 571, 603, 942, 974
Hpy188III TCNNGA 8 cut(s) 115, 178, 315, 486, 517, 560, 1076, 1162
Hpy8I GTNNAC 5 cut(s) 67, 304, 616, 741, 874
Hpy99I CGWCG 7 cut(s) 19, 22, 101, 305, 349, 443, 1157
HpyAV CCTTC 2 cut(s) 367, 937
HpyCH4III ACNGT 5 cut(s) 289, 339, 913, 1185, 1193
HpyCH4IV ACGT 2 cut(s) 234, 730
HpyCH4V TGCA 5 cut(s) 423, 773, 855, 920, 925
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 429
HpyF3I CTNAG 2 cut(s) 705, 939
HpySE526I ACGT 2 cut(s) 234, 730
Hsp92I GRCGYC 1 cut(s) 234
Hsp92II CATG 7 cut(s) 64, 118, 277, 479, 674, 929, 937
HspAI GCGC 3 cut(s) 362, 413, 532
KpnI GGTACC 1 cut(s) 261
Ksp22I TGATCA 2 cut(s) 513, 996
KspI CCGCGG 1 cut(s) 157
LmnI GCTCC 2 cut(s) 642, 946
Lsp1109I GCAGC 1 cut(s) 17
LweI GCATC 3 cut(s) 144, 882, 943
MaeI CTAG 1 cut(s) 690
MaeII ACGT 2 cut(s) 234, 730
MaeIII GTNAC 2 cut(s) 88, 230
MboII GAAGA 3 cut(s) 617, 797, 1055
MfeI CAATTG 1 cut(s) 387
MflI RGATCY 1 cut(s) 717
MhlI GDGCHC 4 cut(s) 33, 111, 639, 711
MluCI AATT 9 cut(s) 353, 387, 394, 548, 675, 761, 831, 1054, 1095
MlyI GAGTC 2 cut(s) 510, 575
MmeI TCCRAC 2 cut(s) 120, 368
Mph1103I ATGCAT 1 cut(s) 927
MroXI GAANNNNTTC 1 cut(s) 968
MseI TTAA 4 cut(s) 546, 726, 1169, 1232
MspA1I CMGCKG 1 cut(s) 156
MspI CCGG 4 cut(s) 211, 255, 261, 495
MspR9I CCNGG 6 cut(s) 46, 245, 495, 641, 722, 1018
MunI CAATTG 1 cut(s) 387
Mva1269I GAATGC 1 cut(s) 415
MvaI CCWGG 5 cut(s) 46, 245, 641, 722, 1018
MvnI CGCG 2 cut(s) 14, 156
MwoI GCNNNNNNNGC 2 cut(s) 11, 429
NciI CCSGG 1 cut(s) 495
NlaIII CATG 7 cut(s) 64, 118, 277, 479, 674, 929, 937
NlaIV GGNNCC 4 cut(s) 30, 259, 719, 1022
NmuCI GTSAC 2 cut(s) 88, 230
NsbI TGCGCA 1 cut(s) 533
NsiI ATGCAT 1 cut(s) 927
NspI RCATGY 1 cut(s) 937
PaeR7I CTCGAG 3 cut(s) 80, 461, 537
PagI TCATGA 1 cut(s) 114
PaqCI CACCTGC 1 cut(s) 1027
PcsI WCGNNNNNNNCGW 3 cut(s) 93, 1099, 1108
PctI GAATGC 1 cut(s) 415
PdmI GAANNNNTTC 1 cut(s) 968
PfeI GAWTC 1 cut(s) 556
PkrI GCNGC 4 cut(s) 7, 56, 59, 361
PleI GAGTC 2 cut(s) 509, 574
PpsI GAGTC 2 cut(s) 509, 574
Psp124BI GAGCTC 1 cut(s) 639
Psp6I CCWGG 5 cut(s) 44, 243, 639, 720, 1016
PspGI CCWGG 5 cut(s) 44, 243, 639, 720, 1016
PspN4I GGNNCC 4 cut(s) 30, 259, 719, 1022
PspPI GGNCC 6 cut(s) 204, 213, 226, 247, 1014, 1021
PspXI VCTCGAGB 3 cut(s) 80, 461, 537
PstNI CAGNNNCTG 1 cut(s) 917
PsuI RGATCY 1 cut(s) 717
RsaI GTAC 5 cut(s) 259, 617, 982, 1187, 1195
RsaNI GTAC 5 cut(s) 258, 616, 981, 1186, 1194
SacI GAGCTC 1 cut(s) 639
SacII CCGCGG 1 cut(s) 157
SalI GTCGAC 1 cut(s) 302
SaqAI TTAA 4 cut(s) 546, 726, 1169, 1232
SatI GCNGC 4 cut(s) 6, 55, 58, 360
Sau96I GGNCC 6 cut(s) 204, 213, 226, 247, 1014, 1021
ScaI AGTACT 1 cut(s) 1187
SchI GAGTC 2 cut(s) 510, 575
ScrFI CCNGG 6 cut(s) 46, 245, 495, 641, 722, 1018
SduI GDGCHC 4 cut(s) 33, 111, 639, 711
SfaNI GCATC 3 cut(s) 144, 882, 943
SfcI CTRYAG 1 cut(s) 1189
Sfr274I CTCGAG 3 cut(s) 80, 461, 537
Sfr303I CCGCGG 1 cut(s) 157
SgrBI CCGCGG 1 cut(s) 157
SlaI CTCGAG 3 cut(s) 80, 461, 537
SmlI CTYRAG 3 cut(s) 80, 461, 537
SmoI CTYRAG 3 cut(s) 80, 461, 537
Sse9I AATT 9 cut(s) 353, 387, 394, 548, 675, 761, 831, 1054, 1095
SsiI CCGC 8 cut(s) 12, 49, 54, 57, 154, 156, 189, 359
SspMI CTAG 1 cut(s) 690
SstI GAGCTC 1 cut(s) 639
StyD4I CCNGG 6 cut(s) 44, 243, 493, 639, 720, 1016
TaaI ACNGT 5 cut(s) 289, 339, 913, 1185, 1193
TaiI ACGT 2 cut(s) 237, 733
TaqI TCGA 9 cut(s) 81, 123, 177, 303, 462, 538, 561, 1075, 1093
TasI AATT 9 cut(s) 353, 387, 394, 548, 675, 761, 831, 1054, 1095
TatI WGTACW 2 cut(s) 615, 1185
TauI GCSGC 3 cut(s) 57, 60, 362
TfiI GAWTC 1 cut(s) 556
Tru1I TTAA 4 cut(s) 546, 726, 1169, 1232
Tru9I TTAA 4 cut(s) 546, 726, 1169, 1232
TseFI GTSAC 2 cut(s) 88, 230
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 2 cut(s) 88, 230
TspDTI ATGAA 6 cut(s) 464, 588, 687, 977, 1079, 1232
TspGWI ACGGA 1 cut(s) 383
XapI RAATTY 1 cut(s) 675
XceI RCATGY 1 cut(s) 937
XhoI CTCGAG 3 cut(s) 80, 461, 537
XmiI GTMKAC 1 cut(s) 303
XmnI GAANNNNTTC 1 cut(s) 968
XspI CTAG 1 cut(s) 690
ZraI GACGTC 1 cut(s) 235
ZrmI AGTACT 1 cut(s) 1187
Zsp2I ATGCAT 1 cut(s) 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.