RchiOBHm_Chr1g0336221

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
27893173 .. 27897638
4466 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56418

Sequence Viewer

Length: 3381 bp
ATGGAGAGCACTTGGTTCTTCCTGGTCTACTGTTGTATGGCAGCTAGCTGCTTAACTATGGCAGCAGCACAAACCAACATCAGCACAGACCAATCTGCTCTTCTTGCTCTCAAAGCCCATATCAGTAGTGACCCTCATAACTTGATCTTGACCAATTGGTCAACCACTATTCCCATTTGCAATTGGGTTGGCATTACATGTGGTGCACACCACCTTAGAGCCACAGCCTTGAACCTCTCCTACTTTGATCTCCAAGGCACTATTCCTCCTCAGCTAGGCAACCTATCATTTCTTGTTGATATTGACTTGAGAAATAACAGTTTCCATGGCCATTTGCCGGGGGAATTGAATCGTCTGCGCCGGTTGAAGTTCATTAACTTTGGAGCCAACAAATTTATGGGAGCCATTCCATCGTGGTTCGGGCTCTTATCTAAACTTCAATCATTATATTTGTTTGGTAATCAATTTTCAGGTTCCATACCAGCGACTATCTTCAACTTATCTGTGCTGCAAGTAATTGATTTTAGCTATAACCAACTATCAGGTAGCATACCGAGAGAAATTGGAAACTTAACAACGTTGAAGGAGATCTTCCTTGATTTTAACAATTTCACAGAAATTCCAAATGAAATAGGAGATTTAAATCAACTGGAGAAGTTGTTTGTGCAAAAAAATGCCCTAGAAGGAAATATTCCTATGGCTGTCTTCAATATGTCTTCTTTGATTATTTTGGCTCTACTTCAAAACAACTTGAAGGGCAGACTTCCAGATAATATGTGCCAAAATCTTCCTCATCTTCAAACGTTGGCTTTGGGTTACAACCAGTTTGATGGTCCACTTCCATCCAAATTTTGGCAATGCAACAAACTTGTTGATATATTTTTGGCTCGTAACAGCTTCAGTGGAAGTATACCCAAATGGATTGGAAACGCAACCCAGTTAAAGGAAGTTGAACTTGCGGAAAACAGTTTAACAGGTACCATACCGCATGAGATTGGTAATCTTCCAAATTTAGTGTGGTTAAGCCTCAATTTAAATAATCTCAATGGCCTCATCCCAAACACAATTTTCAACACATCCACAGCAGCGTTTATAAGTCTAGTTGGTAACAAGCTCTCAGGCAGCCTCCCAACAAATATAGGTCTTGGGCTTCCAAATCTACAAGAGTTCTACTTGGGACAAAATAAATTGAGCGGAGCAATCCCCAAATCCATCTCTAATGCTTCTCGGCTCACCATGCTAAGCTGGCCGCTTAACTTACTTTCTGGCTCTATTCCTAGCACTCTATGTGCTTTAACAAACCTTCAGTATCTTTCCTTATTTGAGAATAATTTAACTATTGATACTACTACTCCAGAAGTAAATATTCTCTCTTGCTTAGCAAATCTTAAAAAGTTGAGGGTCTTAGCCTTCTCAAGCAATCCATTAAATGCCAACCTCCCTATTTCCTTTCGGAATCATTCTACATCTCTTCAAAATGTCTACTTTCAATACTGTGACATGAGAGGTAATATTCCTGACGATCTAGGAAACTTGAGCAGCTTGATAGCCTTATCCTTGTATAACAACAAATTAAGTGGATCAATTCCAACCTCAATTGGAAGACTACATAATCTCCAAGCTATGGGTTTGGGTTACAACAAATTGCAAGGACACATCCCAGATGAACTTTGTCAACTACAAGACCTAGAATTTTTAGGGTTGAGTGATAACCAACTCTCTGGCTCTATACCTTCTTGCTTGGGTCATCTAGCCTCCACACTAAGAAATCTATATCTGGGGTCCAATTTATTGAATTCCACAATACCATCTACCTTGTGGGGACTTTCAGATATCTTGTACCTTAGCTTGTCATCCAATAATTTAAGTGGATCTCTCTCGGAAGATGTTGGTAATCTGAAAGCTGTCGTAGAGATAGATTTATCAAACAACCACTTATCCGGTAGCATACCGAGCAACATTGGGAATCTACAAAGCCTGGTGAATCTCTCCTTGGAGAATAATAAGTTCGAAGGCCTTATTCCTAGTTCACTTGGCAAGTCGCTTAGCTTGGAACTTTTGGATTTATCTGAAAACCATCTGTCTGGATCGATTCCAAAGTCACTCGAATCTCTCAAATATCTCCAGATTTTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATCCCAACAGGTGGACCTTTCCAAAACTTCTCTGCTCAATCATTTGTGTCAAGTGGTGAACTCTGTGGTGCACCCCGATTTCGTGTCCCATCATGCAATAATAGTACATTTGAAGCACATTCAACTAAAGCGAGCATATCCATCTTGAAATACATTATACCAGGGATCTTGTCAGCAACGTTCATAGTTACCTCCATTTGGATAGTGATACTATGTAGAAGAAAGAATGTGGAAACTGCAAAAGAGACTTCATTGTTACCTCAACTTCTATGGAGAAGAGTTTCACACCTCGAACTTGTTAGAGCAACAAATGCATTTAATGAAAGCAACTTACTTGGCAGCGGTGGTTTTGGCTCAGTATATAAAGGAACATTTTCTGATGGGACAGATGTGGCTATAAAGGTTTTCAATTTACAGCTAGAAGGGGCGTTCAAGAGTTTCAATGTTGAGTGTGAAATGCTATGCAACATCCGTCATCGAAATCTTATCAAAATCATCAGTTGTTGCAGTCAACTTGATTTCAAAGCTATGGTACTGAACTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAAAACTTTTGTCTGAATATCCTGCAGAGATTGAGTATTATGATTGATGTTGCGTCGGCATTGGAATACCTTCATCATGGCTATGGAACCCCTATTGTTCACTGTGATTTGAAGCCCAGCAATATCCTACTGGATGAGAATATGTGTGCACATGTTTCTGACTTTGGCATTGCAAAACTCATGTGCGGAAGAGATTCAATGACCCAAACCATTACTCAAGCCACAATTGGATATATGGCCCCAGAGTACGGAATGGAAGGAATAGTTACCAGAAGAGGGGATGTTTACAGTTTTGGTATTGTATTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGAGATGTTTGGGGACATCAGTTTGAAGCAGTGGGTTGCAAATTCACCATTACTTGATGTTGTGGATGCCAACTTACTTGGGACAGAAGAAGGGAATCGTGAATTTGTGAATAAGAGGGAGGGTTTATCATCCATTATGAGATTAGCTCTAACTTGTTCCACCGAATCACCAGAAGAGAGGATAAATATGCAAGAGGCTCTAGCCACTCTAAACAAAATTAAGATCAAGTTTTTCAAGGACGCTGCTGCAGGAGGAGCTGTGGTGTTGAACCTTCCTCTTGTTAAGCAGCCCTTTGTATAG

Protein Analysis

1126

Amino Acids

123.68

Weight (kDa)

6.34

Isoelectric Point (pI)

35.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 28 - 67 8.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 145 - 262 1.4e-09 Leucine-rich repeat region
LRR_14 PF23598 253 - 347 2.7e-06 Leucine-rich repeat region
LRR_14 PF23598 588 - 718 7.7e-09 Leucine-rich repeat region
LRR_8 PF13855 659 - 718 1.9e-06 Leucine rich repeat
Pkinase PF00069 828 - 1095 1.6e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 831 - 1094 3e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1094
AasI GACNNNNNNGTC 1 cut(s) 157
Acc65I GGTACC 1 cut(s) 977
AccB1I GGYRCC 1 cut(s) 977
AccB7I CCANNNNNTGG 3 cut(s) 852, 1624, 2174
AccBSI CCGCTC 1 cut(s) 1194
AccI GTMKAC 3 cut(s) 27, 910, 1482
AciI CCGC 6 cut(s) 959, 986, 1194, 1250, 2505, 2928
AclI AACGTT 3 cut(s) 578, 803, 2342
AclWI GGATC 4 cut(s) 1588, 1879, 2095, 2336
AcoI YGGCCR 2 cut(s) 328, 1247
AcsI RAATTY 9 cut(s) 392, 618, 848, 1009, 1691, 1795, 2134, 3121, 3182
AcuI CTGAAG 2 cut(s) 883, 1289
AfaI GTAC 5 cut(s) 979, 1841, 2269, 2697, 2990
AfiI CCNNNNNNNGG 9 cut(s) 275, 337, 852, 943, 1624, 2174, 2361, 2990, 3018
AflIII ACRYGT 2 cut(s) 197, 2893
AjnI CCWGG 3 cut(s) 21, 1977, 2323
AjuI GAANNNNNNNTTGG 6 cut(s) 84, 116, 246, 278, 1976, 2008
Alw21I GWGCWC 4 cut(s) 11, 208, 2236, 2893
Alw26I GTCTC 1 cut(s) 2402
Alw44I GTGCAC 3 cut(s) 204, 2232, 2889
AlwI GGATC 4 cut(s) 1588, 1879, 2095, 2336
AoxI GGCC 5 cut(s) 328, 1048, 1247, 2014, 2979
ApaLI GTGCAC 3 cut(s) 204, 2232, 2889
ApoI RAATTY 9 cut(s) 392, 618, 848, 1009, 1691, 1795, 2134, 3121, 3182
ArsI GACNNNNNNTTYG 2 cut(s) 2737, 2769
Asp700I GAANNNNTTC 4 cut(s) 2443, 2536, 2811, 2935
Asp718I GGTACC 1 cut(s) 977
AspLEI GCGC 1 cut(s) 360
AspS9I GGNCC 4 cut(s) 833, 1782, 2177, 2980
AsuC2I CCSGG 1 cut(s) 339
AsuHPI GGTGA 5 cut(s) 1225, 1993, 2231, 3117, 3240
AsuII TTCGAA 1 cut(s) 2010
AsuNHI GCTAGC 1 cut(s) 44
AvaII GGWCC 3 cut(s) 833, 1782, 2177
BaeGI GKGCMC 3 cut(s) 208, 2236, 2893
BalI TGGCCA 1 cut(s) 330
BanI GGYRCC 1 cut(s) 977
BanII GRGCYC 1 cut(s) 426
BbsI GAAGAC 3 cut(s) 697, 708, 1609
Bbv12I GWGCWC 4 cut(s) 11, 208, 2236, 2893
BbvCI CCTCAGC 1 cut(s) 270
BciT130I CCWGG 3 cut(s) 23, 1979, 2325
BcnI CCSGG 1 cut(s) 339
BcoDI GTCTC 1 cut(s) 2402
BfmI CTRYAG 2 cut(s) 2765, 3327
BglII AGATCT 1 cut(s) 588
BlpI GCTNAGC 3 cut(s) 1241, 1378, 2045
Bme1390I CCNGG 4 cut(s) 23, 339, 1979, 2325
Bme18I GGWCC 3 cut(s) 833, 1782, 2177
BmgT120I GGNCC 4 cut(s) 833, 1782, 2177, 2980
BmiI GGNNCC 8 cut(s) 385, 403, 475, 979, 1783, 2720, 2830, 2982
BmrFI CCNGG 4 cut(s) 23, 339, 1979, 2325
BmrI ACTGGG 1 cut(s) 931
BmsI GCATC 1 cut(s) 3136
BmtI GCTAGC 1 cut(s) 48
BmuI ACTGGG 1 cut(s) 931
BpiI GAAGAC 3 cut(s) 697, 708, 1609
BplI GAGNNNNNCTC 2 cut(s) 3211, 3243
BpmI CTGGAG 3 cut(s) 671, 1338, 2108
Bpu10I CCTNAGC 2 cut(s) 270, 1844
Bpu1102I GCTNAGC 3 cut(s) 1241, 1378, 2045
Bpu14I TTCGAA 1 cut(s) 2010
BpuEI CTTGAG 5 cut(s) 328, 1399, 1555, 2744, 2943
BpuMI CCSGG 1 cut(s) 339
Bsa29I ATCGAT 1 cut(s) 2090
BsaBI GATNNNNATC 1 cut(s) 642
BsaJI CCNNGG 6 cut(s) 253, 325, 338, 1992, 2155, 2324
BsaWI WCCGGW 1 cut(s) 1940
Bsc4I CCNNNNNNNGG 9 cut(s) 275, 337, 852, 943, 1624, 2174, 2361, 2990, 3018
Bse118I RCCGGY 1 cut(s) 360
Bse1I ACTGG 4 cut(s) 654, 823, 937, 2877
Bse3DI GCAATG 2 cut(s) 863, 2910
Bse8I GATNNNNATC 1 cut(s) 642
BseBI CCWGG 3 cut(s) 23, 1979, 2325
BseCI ATCGAT 1 cut(s) 2090
BseDI CCNNGG 6 cut(s) 253, 325, 338, 1992, 2155, 2324
BseJI GATNNNNATC 1 cut(s) 642
BseLI CCNNNNNNNGG 9 cut(s) 275, 337, 852, 943, 1624, 2174, 2361, 2990, 3018
BseMI GCAATG 2 cut(s) 863, 2910
BseMII CTCAG 3 cut(s) 284, 1131, 2532
BseNI ACTGG 4 cut(s) 654, 823, 937, 2877
BseRI GAGGAG 2 cut(s) 258, 3348
BseSI GKGCMC 3 cut(s) 208, 2236, 2893
BseYI CCCAGC 1 cut(s) 2858
BshFI GGCC 5 cut(s) 330, 1050, 1249, 2016, 2981
BshNI GGYRCC 1 cut(s) 977
BshVI ATCGAT 1 cut(s) 2090
BsiHKAI GWGCWC 4 cut(s) 11, 208, 2236, 2893
BsiSI CCGG 3 cut(s) 338, 361, 1941
BslFI GGGAC 6 cut(s) 1191, 1836, 2234, 2560, 3107, 3175
BslI CCNNNNNNNGG 9 cut(s) 275, 337, 852, 943, 1624, 2174, 2361, 2990, 3018
BsmAI GTCTC 1 cut(s) 2402
BsmFI GGGAC 6 cut(s) 1191, 1836, 2234, 2560, 3107, 3175
BsnI GGCC 5 cut(s) 330, 1050, 1249, 2016, 2981
Bsp119I TTCGAA 1 cut(s) 2010
Bsp1286I GDGCHC 5 cut(s) 11, 208, 426, 2236, 2893
Bsp143I GATC 9 cut(s) 144, 247, 588, 1522, 1580, 1871, 2087, 2328, 3303
Bsp1720I GCTNAGC 3 cut(s) 1241, 1378, 2045
Bsp19I CCATGG 1 cut(s) 325
BspACI CCGC 6 cut(s) 959, 986, 1194, 1250, 2505, 2928
BspANI GGCC 5 cut(s) 330, 1050, 1249, 2016, 2981
BspCNI CTCAG 3 cut(s) 283, 1130, 2531
BspDI ATCGAT 1 cut(s) 2090
BspLI GGNNCC 8 cut(s) 385, 403, 475, 979, 1783, 2720, 2830, 2982
BspMAI CTGCAG 2 cut(s) 2769, 3331
BspOI GCTAGC 1 cut(s) 48
BspPI GGATC 4 cut(s) 1588, 1879, 2095, 2336
BspQI GCTCTTC 1 cut(s) 105
BspT104I TTCGAA 1 cut(s) 2010
BspT107I GGYRCC 1 cut(s) 977
BsrBI CCGCTC 1 cut(s) 1194
BsrDI GCAATG 2 cut(s) 863, 2910
BsrFI RCCGGY 1 cut(s) 360
BsrI ACTGG 4 cut(s) 654, 823, 937, 2877
BssAI RCCGGY 1 cut(s) 360
BssECI CCNNGG 6 cut(s) 253, 325, 338, 1992, 2155, 2324
BssMI GATC 9 cut(s) 144, 247, 588, 1522, 1580, 1871, 2087, 2328, 3303
BssNAI GTATAC 1 cut(s) 911
BssT1I CCWWGG 4 cut(s) 253, 325, 1992, 2155
Bst1107I GTATAC 1 cut(s) 911
Bst2UI CCWGG 3 cut(s) 23, 1979, 2325
Bst4CI ACNGT 6 cut(s) 32, 320, 968, 1496, 2846, 3032
Bst6I CTCTTC 6 cut(s) 105, 1476, 2434, 2926, 3010, 3249
BstAPI GCANNNNNTGC 1 cut(s) 2474
BstBI TTCGAA 1 cut(s) 2010
BstC8I GCNNGC 3 cut(s) 46, 1247, 2296
BstDSI CCRYGG 1 cut(s) 325
BstENI CCTNNNNNAGG 1 cut(s) 273
BstHHI GCGC 1 cut(s) 360
BstKTI GATC 9 cut(s) 147, 250, 591, 1525, 1583, 1874, 2090, 2331, 3306
BstMAI GTCTC 1 cut(s) 2402
BstMBI GATC 9 cut(s) 144, 247, 588, 1522, 1580, 1871, 2087, 2328, 3303
BstMWI GCNNNNNNNGC 7 cut(s) 104, 113, 1237, 1246, 1953, 2474, 3335
BstNI CCWGG 3 cut(s) 23, 1979, 2325
BstNSI RCATGY 3 cut(s) 201, 2710, 2897
BstSCI CCNGG 4 cut(s) 21, 337, 1977, 2323
BstSFI CTRYAG 2 cut(s) 2765, 3327
BstSLI GKGCMC 3 cut(s) 208, 2236, 2893
BstV2I GAAGAC 3 cut(s) 697, 708, 1609
BstX2I RGATCY 3 cut(s) 588, 1871, 2328
BstXI CCANNNNNNTGG 3 cut(s) 830, 1721, 2084
BstYI RGATCY 3 cut(s) 588, 1871, 2328
BstZ17I GTATAC 1 cut(s) 911
Bsu15I ATCGAT 1 cut(s) 2090
BsuRI GGCC 5 cut(s) 330, 1050, 1249, 2016, 2981
BsuTUI ATCGAT 1 cut(s) 2090
BtgI CCRYGG 1 cut(s) 325
BtsI GCAGTG 1 cut(s) 3116
BtsIMutI CAGTG 3 cut(s) 907, 2842, 3116
Cac8I GCNNGC 3 cut(s) 46, 1247, 2296
CfoI GCGC 1 cut(s) 360
Cfr10I RCCGGY 1 cut(s) 360
Cfr13I GGNCC 4 cut(s) 833, 1782, 2177, 2980
ClaI ATCGAT 1 cut(s) 2090
CseI GACGC 2 cut(s) 2784, 3329
Csp6I GTAC 5 cut(s) 978, 1840, 2268, 2696, 2989
CspCI CAANNNNNGTGG 2 cut(s) 1558, 1593
CviQI GTAC 5 cut(s) 978, 1840, 2268, 2696, 2989
DpnI GATC 9 cut(s) 146, 249, 590, 1524, 1582, 1873, 2089, 2330, 3305
DpnII GATC 9 cut(s) 144, 247, 588, 1522, 1580, 1871, 2087, 2328, 3303
DraI TTTAAA 2 cut(s) 642, 1035
DrdI GACNNNNNNGTC 1 cut(s) 157
DseDI GACNNNNNNGTC 1 cut(s) 157
EaeI YGGCCR 2 cut(s) 328, 1247
Eam1104I CTCTTC 6 cut(s) 105, 1476, 2434, 2926, 3010, 3249
EarI CTCTTC 6 cut(s) 105, 1476, 2434, 2926, 3010, 3249
Eco130I CCWWGG 4 cut(s) 253, 325, 1992, 2155
Eco147I AGGCCT 1 cut(s) 2016
Eco24I GRGCYC 1 cut(s) 426
Eco32I GATATC 1 cut(s) 1834
Eco47I GGWCC 3 cut(s) 833, 1782, 2177
Eco57I CTGAAG 2 cut(s) 883, 1289
EcoNI CCTNNNNNAGG 1 cut(s) 273
EcoRI GAATTC 1 cut(s) 1795
EcoRII CCWGG 3 cut(s) 21, 1977, 2323
EcoRV GATATC 1 cut(s) 1834
EcoT14I CCWWGG 4 cut(s) 253, 325, 1992, 2155
EcoT22I ATGCAT 1 cut(s) 2479
EcoT38I GRGCYC 1 cut(s) 426
ErhI CCWWGG 4 cut(s) 253, 325, 1992, 2155
FalI AAGNNNNNCTT 5 cut(s) 575, 607, 939, 971, 3356
FaqI GGGAC 6 cut(s) 1191, 1836, 2234, 2560, 3107, 3175
FblI GTMKAC 3 cut(s) 27, 910, 1482
FriOI GRGCYC 1 cut(s) 426
GlaI GCGC 1 cut(s) 359
GsaI CCCAGC 1 cut(s) 2862
GsuI CTGGAG 3 cut(s) 671, 1338, 2108
HaeIII GGCC 5 cut(s) 330, 1050, 1249, 2016, 2981
HapII CCGG 3 cut(s) 338, 361, 1941
HgaI GACGC 2 cut(s) 2784, 3329
HhaI GCGC 1 cut(s) 360
Hin6I GCGC 1 cut(s) 358
HinP1I GCGC 1 cut(s) 358
HincII GTYRAC 3 cut(s) 162, 1676, 2675
HindII GTYRAC 3 cut(s) 162, 1676, 2675
HinfI GANTC 9 cut(s) 349, 1456, 1966, 1984, 2092, 2108, 2936, 3175, 3245
HpaII CCGG 3 cut(s) 338, 361, 1941
HphI GGTGA 5 cut(s) 1225, 1993, 2231, 3117, 3240
Hpy188I TCNGA 8 cut(s) 1455, 1831, 1882, 1899, 2071, 2542, 2757, 2902
Hpy188III TCNNGA 9 cut(s) 148, 767, 1355, 1517, 2085, 2125, 2308, 2596, 3179
Hpy99I CGWCG 1 cut(s) 2800
HpyCH4III ACNGT 6 cut(s) 32, 320, 968, 1496, 2846, 3032
HpyCH4IV ACGT 3 cut(s) 578, 803, 2342
HpyF10VI GCNNNNNNNGC 7 cut(s) 104, 113, 1237, 1246, 1953, 2474, 3335
HpySE526I ACGT 3 cut(s) 578, 803, 2342
HspAI GCGC 1 cut(s) 358
KpnI GGTACC 1 cut(s) 981
Kzo9I GATC 9 cut(s) 144, 247, 588, 1522, 1580, 1871, 2087, 2328, 3303
LguI GCTCTTC 1 cut(s) 105
LmnI GCTCC 5 cut(s) 383, 401, 1196, 2718, 3335
LweI GCATC 1 cut(s) 3136
MaeII ACGT 3 cut(s) 578, 803, 2342
MalI GATC 9 cut(s) 146, 249, 590, 1524, 1582, 1873, 2089, 2330, 3305
MbiI CCGCTC 1 cut(s) 1194
MboI GATC 9 cut(s) 144, 247, 588, 1522, 1580, 1871, 2087, 2328, 3303
MfeI CAATTG 4 cut(s) 154, 181, 1596, 2967
MflI RGATCY 3 cut(s) 588, 1871, 2328
MhlI GDGCHC 5 cut(s) 11, 208, 426, 2236, 2893
MlsI TGGCCA 1 cut(s) 330
MluNI TGGCCA 1 cut(s) 330
MmeI TCCRAC 1 cut(s) 1613
Mox20I TGGCCA 1 cut(s) 330
Mph1103I ATGCAT 1 cut(s) 2479
MroXI GAANNNNTTC 4 cut(s) 2443, 2536, 2811, 2935
MscI TGGCCA 1 cut(s) 330
MslI CAYNNNNRTG 1 cut(s) 2823
Msp20I TGGCCA 1 cut(s) 330
MspA1I CMGCKG 1 cut(s) 2505
MspI CCGG 3 cut(s) 338, 361, 1941
MspR9I CCNGG 4 cut(s) 23, 339, 1979, 2325
MunI CAATTG 4 cut(s) 154, 181, 1596, 2967
MvaI CCWGG 3 cut(s) 23, 1979, 2325
MwoI GCNNNNNNNGC 7 cut(s) 104, 113, 1237, 1246, 1953, 2474, 3335
NciI CCSGG 1 cut(s) 339
NcoI CCATGG 1 cut(s) 325
NdeII GATC 9 cut(s) 144, 247, 588, 1522, 1580, 1871, 2087, 2328, 3303
NheI GCTAGC 1 cut(s) 44
NlaIV GGNNCC 8 cut(s) 385, 403, 475, 979, 1783, 2720, 2830, 2982
NmeAIII GCCGAG 1 cut(s) 1207
NmuCI GTSAC 3 cut(s) 128, 1496, 2100
NsiI ATGCAT 1 cut(s) 2479
NspI RCATGY 3 cut(s) 201, 2710, 2897
NspV TTCGAA 1 cut(s) 2010
PceI AGGCCT 1 cut(s) 2016
PciI ACATGT 2 cut(s) 197, 2893
PciSI GCTCTTC 1 cut(s) 105
PdmI GAANNNNTTC 4 cut(s) 2443, 2536, 2811, 2935
PfeI GAWTC 9 cut(s) 349, 1456, 1966, 1984, 2092, 2108, 2936, 3175, 3245
PflMI CCANNNNNTGG 3 cut(s) 852, 1624, 2174
PscI ACATGT 2 cut(s) 197, 2893
PsiI TTATAA 1 cut(s) 1094
Psp1406I AACGTT 3 cut(s) 578, 803, 2342
Psp6I CCWGG 3 cut(s) 21, 1977, 2323
PspFI CCCAGC 1 cut(s) 2858
PspGI CCWGG 3 cut(s) 21, 1977, 2323
PspN4I GGNNCC 8 cut(s) 385, 403, 475, 979, 1783, 2720, 2830, 2982
PspPI GGNCC 4 cut(s) 833, 1782, 2177, 2980
PsrI GAACNNNNNNTAC 2 cut(s) 224, 256
PstI CTGCAG 2 cut(s) 2769, 3331
PsuI RGATCY 3 cut(s) 588, 1871, 2328
RsaI GTAC 5 cut(s) 979, 1841, 2269, 2697, 2990
RsaNI GTAC 5 cut(s) 978, 1840, 2268, 2696, 2989
RseI CAYNNNNRTG 1 cut(s) 2823
SapI GCTCTTC 1 cut(s) 105
Sau3AI GATC 9 cut(s) 144, 247, 588, 1522, 1580, 1871, 2087, 2328, 3303
Sau96I GGNCC 4 cut(s) 833, 1782, 2177, 2980
ScrFI CCNGG 4 cut(s) 23, 339, 1979, 2325
SduI GDGCHC 5 cut(s) 11, 208, 426, 2236, 2893
SfaNI GCATC 1 cut(s) 3136
SfcI CTRYAG 2 cut(s) 2765, 3327
SfuI TTCGAA 1 cut(s) 2010
SinI GGWCC 3 cut(s) 833, 1782, 2177
SmiI ATTTAAAT 2 cut(s) 642, 1035
SmiMI CAYNNNNRTG 1 cut(s) 2823
SmlI CTYRAG 5 cut(s) 307, 1414, 1534, 2723, 2958
SmoI CTYRAG 5 cut(s) 307, 1414, 1534, 2723, 2958
SseBI AGGCCT 1 cut(s) 2016
SsiI CCGC 6 cut(s) 959, 986, 1194, 1250, 2505, 2928
SspI AATATT 3 cut(s) 691, 1366, 1513
StuI AGGCCT 1 cut(s) 2016
StyD4I CCNGG 4 cut(s) 21, 337, 1977, 2323
StyI CCWWGG 4 cut(s) 253, 325, 1992, 2155
SwaI ATTTAAAT 2 cut(s) 642, 1035
TaaI ACNGT 6 cut(s) 32, 320, 968, 1496, 2846, 3032
TaiI ACGT 3 cut(s) 581, 806, 2345
TaqI TCGA 5 cut(s) 2010, 2090, 2106, 2454, 2641
TatI WGTACW 1 cut(s) 2267
TauI GCSGC 1 cut(s) 1252
TfiI GAWTC 9 cut(s) 349, 1456, 1966, 1984, 2092, 2108, 2936, 3175, 3245
TscAI CASTG 3 cut(s) 907, 2849, 3116
TseFI GTSAC 3 cut(s) 128, 1496, 2100
Tsp45I GTSAC 3 cut(s) 128, 1496, 2100
TspDTI ATGAA 7 cut(s) 361, 642, 1680, 2335, 2403, 2499, 2804
TspGWI ACGGA 2 cut(s) 2624, 3006
TspRI CASTG 3 cut(s) 907, 2849, 3116
Van91I CCANNNNNTGG 3 cut(s) 852, 1624, 2174
VneI GTGCAC 3 cut(s) 204, 2232, 2889
VpaK11BI GGWCC 3 cut(s) 833, 1782, 2177
XagI CCTNNNNNAGG 1 cut(s) 273
XapI RAATTY 9 cut(s) 392, 618, 848, 1009, 1691, 1795, 2134, 3121, 3182
XceI RCATGY 3 cut(s) 201, 2710, 2897
XcmI CCANNNNNNNNNTGG 4 cut(s) 394, 849, 1014, 1815
XmiI GTMKAC 3 cut(s) 27, 910, 1482
XmnI GAANNNNTTC 4 cut(s) 2443, 2536, 2811, 2935
Zsp2I ATGCAT 1 cut(s) 2479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.