Rmu_sc0003151.1_g000001

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003151.1
OG0000058
Physical Location & Seq
Forward (+)
2830 .. 8555
5726 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003151.1_g000001.1.cds

Sequence Viewer

Length: 2721 bp
atggagagagttacttggttcttcctggtatacttgatctgttgtgaggcggctagctgcttgactatggcagcacaaaccaaccttaacatcaccacagaccggtctgctcttcttgctctaaaagaccatatcaccagtgaccctcaaaacatgatcctcaccaattggtcaaccaccacccctatttgcaactgggttggcgtcatttgtggtgcacgccatcatcgagtcacagagttgaacctctcttactttggtctcgcgggcaccattcctcctgagctaggcaacttatcattgcttgttgatctggacatccaaaataacagtttccagggtcctataccatatgagattggttatcttccaaatttagagatattggctctcggtgataataatctaaatggccatatcccatcctcaatcttcaatatctccacaataaaagtattagatctcggcctcaaccagctttcaagtagcctcccagcaaacataggccttgggcttccaaacctacaatggttttcagtaggaatgaatcacctcagtggagtaatccccaaatccatctccaatgcttctaagctttgggatctaggcctaggaggtaactctttttctggatttattccaactactctgtgcctcttgacaaaccttgaagtcctcagattgttcgagaataatttgaccattgatacctctactccagaagttgatattttttctggtctgctaaatcttagaaatttgaggtatttagtcttcacaagcaatccattaaatgcgaagctttcgatttccttcagtaatttctctgcatcacttcaatatcttggtttagaaaattgcagcttgagaggtaacatccccagtgatattgggaatttgagtagcttgatagatttaggcatgggagacaatcaattgagcgggccaattccaagctcaatgggaagactacataatcttcaaggtttgggtatgcatgataacacattgcaaggatacattccagatgagctttgtcaactagaaaacttatttgttttgtccttgggtcggaatcaactctctggttctgtaccttcctgcttgggtaatctaacagcatctctaaggtatctatctttggagtacaatttgttgaattccacaataccatctaccttgtggggacttacagatatcttggaactagacttgtcatccaattctctaattggacccctatcaggtgctgttggtaatttgaaagctgctacagacatagatgtatcatacaaccaattatctgggagtgtaccaagtagcatcgggagtttagtgagtttggtcaatctctccttagcacataacaatctagaaggccctattcctagttcctttgcagattgtgtaagcttagaaggattggatttatctcgaaatagtttcaccggagtgattccaaagtctctagaagcactctcacatctcaagcatctgaatttgtctttcaacagactccaaggagaaattccaagcggcggtcctttcaaaaacttctctgctcaatcatttgtttcaaaccatggactctgtggtggatcccaatttcaagttccaccatgcaaaagaaaaactaggatatctatcttgaagtatgttattccggggatcttgtcagcaatgcttctagcggcctccatattttggatgttgatgttacgcataaaaaagaatgcaacatctgcagcacatactatcttgacacctcaagttttctggagaagagtttcatacctagagctcctacatgcgacagatggattcaatgaaagcaacttacttggtactgggggttttggctcagtatataaaggagcattgtcatgtgggatagaggttgcgataaaggctttcaatttggagttagaaggggcatttacaagttttgaggttgaatgtgaagtgttaagtaatgctcgtcaccgaaatcttgtcaaagtcatcagttgctgcagtcaaattgatttcaaaggtcttgtattgaattacatgcccaatgggagccttgagaagtggttgtactctcaggatccttctttgaacataatgcagaggttggatataatgatagacgttgcatcggcattggagtaccttcatcatggttatgaagtacctattgtccattgtgatttgaagccaagcaacatcctactagatgatgatatggttgcacatgttgctgattttggtattgcgagacttctgggtggaggagattctatgactcaaaccatgaccttggccacaattgggtatatggctccagagtatggaatgcaaggaatggtgaccagaagaggtgatgtgtatagttttggtattgtggtgatggaaacattcacaagaaggaagccaaccgatgagatcttcgctggggaaatgagactaaatcaatgggttgcaaatttcctagttgcagatgcgatagttgaagttgtggatggtagtttacttggaagcgaggaggctcatgacttcgtgagcaagagggactgcttatcatccattatgagattagctattgcttgttcggcagaatcaccggaagagaggataaacatgcaagaggctgtagccatgcttaaaacaatcaagaccaagttttcaaaggactctgctgcaagaggtgtggtggtgaaccgtcatcctgtttcgtaa

Protein Analysis

906

Amino Acids

98.48

Weight (kDa)

5.43

Isoelectric Point (pI)

32.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 269
AccB7I CCANNNNNTGG 2 cut(s) 1704, 2333
AccBSI CCGCTC 1 cut(s) 942
AccI GTMKAC 1 cut(s) 30
AccII CGCG 1 cut(s) 266
AciI CCGC 6 cut(s) 50, 266, 942, 1536, 1539, 1691
AclWI GGATC 7 cut(s) 151, 609, 1593, 1606, 1676, 2084, 2097
AcoI YGGCCR 2 cut(s) 412, 2304
AcsI RAATTY 7 cut(s) 373, 757, 895, 1159, 1498, 1527, 2467
AcuI CTGAAG 1 cut(s) 799
AcyI GRCGYC 1 cut(s) 204
AfaI GTAC 7 cut(s) 1095, 1148, 1314, 1846, 2081, 2153, 2175
AfiI CCNNNNNNNGG 8 cut(s) 102, 287, 1071, 1244, 1538, 1704, 2313, 2333
AflIII ACRYGT 1 cut(s) 2236
AgeI ACCGGT 1 cut(s) 102
AjnI CCWGG 2 cut(s) 24, 336
AjuI GAANNNNNNNTTGG 4 cut(s) 1512, 1544, 1596, 1628
AleI CACNNNNGTG 2 cut(s) 555, 1451
Alw21I GWGCWC 2 cut(s) 220, 1803
Alw26I GTCTC 5 cut(s) 266, 921, 1470, 2254, 2440
Alw44I GTGCAC 1 cut(s) 216
AlwI GGATC 7 cut(s) 151, 609, 1593, 1606, 1676, 2084, 2097
AlwNI CAGNNNCTG 2 cut(s) 1250, 2010
AoxI GGCC 8 cut(s) 412, 466, 505, 607, 944, 1378, 1692, 2304
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 7 cut(s) 57, 71, 861, 1268, 1745, 2010, 2681
ApoI RAATTY 7 cut(s) 373, 757, 895, 1159, 1498, 1527, 2467
AsiGI ACCGGT 1 cut(s) 102
Asp700I GAANNNNTTC 1 cut(s) 1786
AspA2I CCTAGG 1 cut(s) 610
AspS9I GGNCC 5 cut(s) 341, 944, 1235, 1379, 1541
AsuC2I CCSGG 1 cut(s) 1665
AsuNHI GCTAGC 1 cut(s) 53
AvaII GGWCC 3 cut(s) 341, 1235, 1541
AvrII CCTAGG 1 cut(s) 610
BaeGI GKGCMC 2 cut(s) 220, 272
BalI TGGCCA 2 cut(s) 414, 2306
BamHI GGATCC 2 cut(s) 1598, 2089
BanI GGYRCC 1 cut(s) 269
BanII GRGCYC 1 cut(s) 1803
BarI GAAGNNNNNNTAC 4 cut(s) 758, 790, 2063, 2095
BbsI GAAGAC 2 cut(s) 766, 973
Bbv12I GWGCWC 2 cut(s) 220, 1803
BbvI GCAGC 7 cut(s) 44, 83, 873, 1255, 1757, 1997, 2668
BccI CCATC 7 cut(s) 231, 430, 584, 1180, 1811, 2386, 2498
BciT130I CCWGG 2 cut(s) 26, 338
BciVI GTATCC 1 cut(s) 1010
BcnI CCSGG 1 cut(s) 1665
BcoDI GTCTC 5 cut(s) 266, 921, 1470, 2254, 2440
BfmI CTRYAG 4 cut(s) 1272, 1743, 2011, 2634
BfuI GTATCC 1 cut(s) 1010
BglII AGATCT 2 cut(s) 460, 2427
BlnI CCTAGG 1 cut(s) 610
Bme1390I CCNGG 3 cut(s) 26, 338, 1665
Bme18I GGWCC 3 cut(s) 341, 1235, 1541
BmgT120I GGNCC 5 cut(s) 341, 944, 1235, 1379, 1541
BmiI GGNNCC 7 cut(s) 271, 342, 1237, 1600, 2063, 2091, 2325
BmrFI CCNGG 3 cut(s) 26, 338, 1665
BmrI ACTGGG 3 cut(s) 205, 876, 1857
BmsI GCATC 6 cut(s) 839, 1130, 1332, 1501, 2147, 2473
BmtI GCTAGC 1 cut(s) 57
BmuI ACTGGG 3 cut(s) 205, 876, 1857
BpiI GAAGAC 2 cut(s) 766, 973
BpmI CTGGAG 3 cut(s) 702, 1798, 2310
Bpu10I CCTNAGC 2 cut(s) 282, 1357
BpuEI CTTGAG 4 cut(s) 886, 1472, 1752, 2087
BpuMI CCSGG 1 cut(s) 1665
BsaBI GATNNNNATC 2 cut(s) 402, 1643
BsaHI GRCGYC 1 cut(s) 204
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 8 cut(s) 337, 508, 610, 1065, 1519, 1582, 1664, 2301
BsaWI WCCGGW 3 cut(s) 102, 1448, 2605
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 700, 730
Bsc4I CCNNNNNNNGG 8 cut(s) 102, 287, 1071, 1244, 1538, 1704, 2313, 2333
Bse118I RCCGGY 1 cut(s) 102
Bse1I ACTGG 4 cut(s) 138, 200, 882, 1852
Bse3DI GCAATG 3 cut(s) 299, 1007, 1686
Bse8I GATNNNNATC 2 cut(s) 402, 1643
BseBI CCWGG 2 cut(s) 26, 338
BseDI CCNNGG 8 cut(s) 337, 508, 610, 1065, 1519, 1582, 1664, 2301
BseGI GGATG 9 cut(s) 318, 422, 876, 1217, 1713, 2208, 2509, 2564, 2707
BseJI GATNNNNATC 2 cut(s) 402, 1643
BseLI CCNNNNNNNGG 8 cut(s) 102, 287, 1071, 1244, 1538, 1704, 2313, 2333
BseMI GCAATG 3 cut(s) 299, 1007, 1686
BseMII CTCAG 5 cut(s) 273, 568, 691, 1875, 2099
BseNI ACTGG 4 cut(s) 138, 200, 882, 1852
BseRI GAGGAG 2 cut(s) 2289, 2540
BseSI GKGCMC 2 cut(s) 220, 272
BseXI GCAGC 7 cut(s) 44, 83, 873, 1255, 1757, 1997, 2668
BseYI CCCAGC 2 cut(s) 493, 2435
Bsh1236I CGCG 1 cut(s) 266
BshFI GGCC 8 cut(s) 414, 468, 507, 609, 946, 1380, 1694, 2306
BshNI GGYRCC 1 cut(s) 269
BshTI ACCGGT 1 cut(s) 102
BsiHKAI GWGCWC 2 cut(s) 220, 1803
BsiSI CCGG 4 cut(s) 103, 1449, 1664, 2606
BslFI GGGAC 2 cut(s) 1200, 2567
BslI CCNNNNNNNGG 8 cut(s) 102, 287, 1071, 1244, 1538, 1704, 2313, 2333
BsmAI GTCTC 5 cut(s) 266, 921, 1470, 2254, 2440
BsmFI GGGAC 2 cut(s) 1200, 2567
BsmI GAATGC 2 cut(s) 1738, 2343
BsnI GGCC 8 cut(s) 414, 468, 507, 609, 946, 1380, 1694, 2306
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 3 cut(s) 220, 272, 1803
Bsp143I GATC 9 cut(s) 36, 156, 310, 460, 601, 1598, 1668, 2089, 2427
Bsp19I CCATGG 1 cut(s) 1582
BspACI CCGC 6 cut(s) 50, 266, 942, 1536, 1539, 1691
BspANI GGCC 8 cut(s) 414, 468, 507, 609, 946, 1380, 1694, 2306
BspCNI CTCAG 5 cut(s) 274, 567, 690, 1874, 2098
BspFNI CGCG 1 cut(s) 266
BspHI TCATGA 1 cut(s) 2533
BspLI GGNNCC 7 cut(s) 271, 342, 1237, 1600, 2063, 2091, 2325
BspMAI CTGCAG 2 cut(s) 1747, 2015
BspOI GCTAGC 1 cut(s) 57
BspPI GGATC 7 cut(s) 151, 609, 1593, 1606, 1676, 2084, 2097
BspQI GCTCTTC 1 cut(s) 117
BspT107I GGYRCC 1 cut(s) 269
BspTNI GGTCTC 1 cut(s) 266
BsrBI CCGCTC 1 cut(s) 942
BsrDI GCAATG 3 cut(s) 299, 1007, 1686
BsrFI RCCGGY 1 cut(s) 102
BsrI ACTGG 4 cut(s) 138, 200, 882, 1852
BssAI RCCGGY 1 cut(s) 102
BssECI CCNNGG 8 cut(s) 337, 508, 610, 1065, 1519, 1582, 1664, 2301
BssMI GATC 9 cut(s) 36, 156, 310, 460, 601, 1598, 1668, 2089, 2427
BssNAI GTATAC 1 cut(s) 31
BssNI GRCGYC 1 cut(s) 204
BssT1I CCWWGG 6 cut(s) 508, 610, 1065, 1519, 1582, 2301
Bst1107I GTATAC 1 cut(s) 31
Bst2UI CCWGG 2 cut(s) 26, 338
Bst4CI ACNGT 2 cut(s) 332, 2705
Bst6I CTCTTC 4 cut(s) 117, 1777, 2353, 2604
BstACI GRCGYC 1 cut(s) 204
BstAPI GCANNNNNTGC 2 cut(s) 1742, 2240
BstC8I GCNNGC 4 cut(s) 55, 220, 268, 944
BstDSI CCRYGG 1 cut(s) 1582
BstEII GGTNACC 1 cut(s) 2350
BstENI CCTNNNNNAGG 1 cut(s) 285
BstF5I GGATG 9 cut(s) 318, 422, 876, 1217, 1713, 2208, 2509, 2564, 2707
BstFNI CGCG 1 cut(s) 266
BstKTI GATC 9 cut(s) 39, 159, 313, 463, 604, 1601, 1671, 2092, 2430
BstMAI GTCTC 5 cut(s) 266, 921, 1470, 2254, 2440
BstMBI GATC 9 cut(s) 36, 156, 310, 460, 601, 1598, 1668, 2089, 2427
BstMWI GCNNNNNNNGC 5 cut(s) 116, 1742, 1907, 2240, 2594
BstNI CCWGG 2 cut(s) 26, 338
BstNSI RCATGY 4 cut(s) 1811, 2053, 2240, 2626
BstPI GGTNACC 1 cut(s) 2350
BstSCI CCNGG 3 cut(s) 24, 336, 1663
BstSFI CTRYAG 4 cut(s) 1272, 1743, 2011, 2634
BstSLI GKGCMC 2 cut(s) 220, 272
BstUI CGCG 1 cut(s) 266
BstV1I GCAGC 7 cut(s) 44, 83, 873, 1255, 1757, 1997, 2668
BstV2I GAAGAC 2 cut(s) 766, 973
BstX2I RGATCY 6 cut(s) 460, 601, 1598, 1668, 2089, 2427
BstXI CCANNNNNNTGG 2 cut(s) 1304, 2302
BstYI RGATCY 6 cut(s) 460, 601, 1598, 1668, 2089, 2427
BstZ17I GTATAC 1 cut(s) 31
BsuI GTATCC 1 cut(s) 1010
BsuRI GGCC 8 cut(s) 414, 468, 507, 609, 946, 1380, 1694, 2306
BtgI CCRYGG 1 cut(s) 1582
BtsCI GGATG 9 cut(s) 318, 422, 876, 1217, 1713, 2208, 2509, 2564, 2707
BtsIMutI CAGTG 3 cut(s) 145, 562, 889
Cac8I GCNNGC 4 cut(s) 55, 220, 268, 944
CaiI CAGNNNCTG 2 cut(s) 1250, 2010
CciI TCATGA 1 cut(s) 2533
Cfr10I RCCGGY 1 cut(s) 102
Cfr13I GGNCC 5 cut(s) 341, 944, 1235, 1379, 1541
CseI GACGC 1 cut(s) 193
Csp6I GTAC 7 cut(s) 1094, 1147, 1313, 1845, 2080, 2152, 2174
CspAI ACCGGT 1 cut(s) 102
CspCI CAANNNNNGTGG 2 cut(s) 2673, 2708
CviQI GTAC 7 cut(s) 1094, 1147, 1313, 1845, 2080, 2152, 2174
DpnI GATC 9 cut(s) 38, 158, 312, 462, 603, 1600, 1670, 2091, 2429
DpnII GATC 9 cut(s) 36, 156, 310, 460, 601, 1598, 1668, 2089, 2427
EaeI YGGCCR 2 cut(s) 412, 2304
Eam1104I CTCTTC 4 cut(s) 117, 1777, 2353, 2604
EarI CTCTTC 4 cut(s) 117, 1777, 2353, 2604
Ecl136II GAGCTC 1 cut(s) 1801
Eco130I CCWWGG 6 cut(s) 508, 610, 1065, 1519, 1582, 2301
Eco147I AGGCCT 2 cut(s) 507, 609
Eco24I GRGCYC 1 cut(s) 1803
Eco31I GGTCTC 1 cut(s) 266
Eco32I GATATC 2 cut(s) 1198, 1641
Eco47I GGWCC 3 cut(s) 341, 1235, 1541
Eco53kI GAGCTC 1 cut(s) 1801
Eco57I CTGAAG 1 cut(s) 799
Eco91I GGTNACC 1 cut(s) 2350
EcoICRI GAGCTC 1 cut(s) 1801
EcoNI CCTNNNNNAGG 1 cut(s) 285
EcoO109I RGGNCCY 2 cut(s) 341, 1379
EcoO65I GGTNACC 1 cut(s) 2350
EcoRI GAATTC 1 cut(s) 1159
EcoRII CCWGG 2 cut(s) 24, 336
EcoRV GATATC 2 cut(s) 1198, 1641
EcoT14I CCWWGG 6 cut(s) 508, 610, 1065, 1519, 1582, 2301
EcoT22I ATGCAT 1 cut(s) 999
EcoT38I GRGCYC 1 cut(s) 1803
ErhI CCWWGG 6 cut(s) 508, 610, 1065, 1519, 1582, 2301
FaqI GGGAC 2 cut(s) 1200, 2567
FauI CCCGC 2 cut(s) 259, 935
FauNDI CATATG 1 cut(s) 352
FblI GTMKAC 1 cut(s) 30
FokI GGATG 9 cut(s) 305, 409, 863, 1204, 1720, 2195, 2516, 2551, 2694
FriOI GRGCYC 1 cut(s) 1803
GsaI CCCAGC 2 cut(s) 497, 2439
GsuI CTGGAG 3 cut(s) 702, 1798, 2310
HaeIII GGCC 8 cut(s) 414, 468, 507, 609, 946, 1380, 1694, 2306
HapII CCGG 4 cut(s) 103, 1449, 1664, 2606
HgaI GACGC 1 cut(s) 193
Hin1I GRCGYC 1 cut(s) 204
HincII GTYRAC 2 cut(s) 174, 1040
HindII GTYRAC 2 cut(s) 174, 1040
HindIII AAGCTT 3 cut(s) 593, 800, 1411
HpaII CCGG 4 cut(s) 103, 1449, 1664, 2606
Hpy166II GTNNAC 7 cut(s) 31, 174, 218, 1040, 1313, 2513, 2701
Hpy188I TCNGA 3 cut(s) 680, 1074, 1497
Hpy8I GTNNAC 7 cut(s) 31, 174, 218, 1040, 1313, 2513, 2701
HpyAV CCTTC 8 cut(s) 823, 1107, 1370, 1412, 1922, 2103, 2165, 2403
HpyCH4III ACNGT 2 cut(s) 332, 2705
HpyCH4IV ACGT 1 cut(s) 2133
HpyF10VI GCNNNNNNNGC 5 cut(s) 116, 1742, 1907, 2240, 2594
HpySE526I ACGT 1 cut(s) 2133
Hsp92I GRCGYC 1 cut(s) 204
Kzo9I GATC 9 cut(s) 36, 156, 310, 460, 601, 1598, 1668, 2089, 2427
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 4 cut(s) 1806, 1874, 2061, 2329
Lsp1109I GCAGC 7 cut(s) 44, 83, 873, 1255, 1757, 1997, 2668
LweI GCATC 6 cut(s) 839, 1130, 1332, 1501, 2147, 2473
MaeII ACGT 1 cut(s) 2133
MaeIII GTNAC 8 cut(s) 10, 140, 232, 617, 872, 1716, 1979, 2350
MalI GATC 9 cut(s) 38, 158, 312, 462, 603, 1600, 1670, 2091, 2429
MbiI CCGCTC 1 cut(s) 942
MboI GATC 9 cut(s) 36, 156, 310, 460, 601, 1598, 1668, 2089, 2427
MfeI CAATTG 3 cut(s) 166, 935, 2310
MflI RGATCY 6 cut(s) 460, 601, 1598, 1668, 2089, 2427
MhlI GDGCHC 3 cut(s) 220, 272, 1803
MlsI TGGCCA 2 cut(s) 414, 2306
MluNI TGGCCA 2 cut(s) 414, 2306
MlyI GAGTC 5 cut(s) 240, 1509, 1581, 2281, 2669
MmeI TCCRAC 3 cut(s) 665, 1052, 2097
Mox20I TGGCCA 2 cut(s) 414, 2306
Mph1103I ATGCAT 1 cut(s) 999
MroXI GAANNNNTTC 1 cut(s) 1786
MscI TGGCCA 2 cut(s) 414, 2306
MseI TTAA 4 cut(s) 87, 791, 1967, 2646
MslI CAYNNNNRTG 4 cut(s) 555, 1451, 1882, 2166
Msp20I TGGCCA 2 cut(s) 414, 2306
MspI CCGG 4 cut(s) 103, 1449, 1664, 2606
MspR9I CCNGG 3 cut(s) 26, 338, 1665
MunI CAATTG 3 cut(s) 166, 935, 2310
Mva1269I GAATGC 2 cut(s) 1738, 2343
MvaI CCWGG 2 cut(s) 26, 338
MvnI CGCG 1 cut(s) 266
MwoI GCNNNNNNNGC 5 cut(s) 116, 1742, 1907, 2240, 2594
NciI CCSGG 1 cut(s) 1665
NcoI CCATGG 1 cut(s) 1582
NdeI CATATG 1 cut(s) 352
NdeII GATC 9 cut(s) 36, 156, 310, 460, 601, 1598, 1668, 2089, 2427
NheI GCTAGC 1 cut(s) 53
NlaIV GGNNCC 7 cut(s) 271, 342, 1237, 1600, 2063, 2091, 2325
NmeAIII GCCGAG 1 cut(s) 444
NmuCI GTSAC 4 cut(s) 140, 232, 1979, 2350
NsiI ATGCAT 1 cut(s) 999
NspI RCATGY 4 cut(s) 1811, 2053, 2240, 2626
OliI CACNNNNGTG 2 cut(s) 555, 1451
PagI TCATGA 1 cut(s) 2533
PceI AGGCCT 2 cut(s) 507, 609
PciI ACATGT 1 cut(s) 2236
PciSI GCTCTTC 1 cut(s) 117
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PctI GAATGC 2 cut(s) 1738, 2343
PdmI GAANNNNTTC 1 cut(s) 1786
PfeI GAWTC 6 cut(s) 547, 1075, 1456, 1821, 2279, 2600
PflMI CCANNNNNTGG 2 cut(s) 1704, 2333
PinAI ACCGGT 1 cut(s) 102
PleI GAGTC 5 cut(s) 239, 1509, 1581, 2281, 2669
PpsI GAGTC 5 cut(s) 239, 1509, 1581, 2281, 2669
PpuMI RGGWCCY 1 cut(s) 341
PscI ACATGT 1 cut(s) 2236
Psp124BI GAGCTC 1 cut(s) 1803
Psp5II RGGWCCY 1 cut(s) 341
Psp6I CCWGG 2 cut(s) 24, 336
PspEI GGTNACC 1 cut(s) 2350
PspFI CCCAGC 2 cut(s) 493, 2435
PspGI CCWGG 2 cut(s) 24, 336
PspN4I GGNNCC 7 cut(s) 271, 342, 1237, 1600, 2063, 2091, 2325
PspPI GGNCC 5 cut(s) 341, 944, 1235, 1379, 1541
PspPPI RGGWCCY 1 cut(s) 341
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstI CTGCAG 2 cut(s) 1747, 2015
PstNI CAGNNNCTG 2 cut(s) 1250, 2010
PsuI RGATCY 6 cut(s) 460, 601, 1598, 1668, 2089, 2427
RsaI GTAC 7 cut(s) 1095, 1148, 1314, 1846, 2081, 2153, 2175
RsaNI GTAC 7 cut(s) 1094, 1147, 1313, 1845, 2080, 2152, 2174
RseI CAYNNNNRTG 4 cut(s) 555, 1451, 1882, 2166
SacI GAGCTC 1 cut(s) 1803
SapI GCTCTTC 1 cut(s) 117
SaqAI TTAA 4 cut(s) 87, 791, 1967, 2646
Sau3AI GATC 9 cut(s) 36, 156, 310, 460, 601, 1598, 1668, 2089, 2427
Sau96I GGNCC 5 cut(s) 341, 944, 1235, 1379, 1541
SchI GAGTC 5 cut(s) 240, 1509, 1581, 2281, 2669
ScrFI CCNGG 3 cut(s) 26, 338, 1665
SduI GDGCHC 3 cut(s) 220, 272, 1803
SfaNI GCATC 6 cut(s) 839, 1130, 1332, 1501, 2147, 2473
SfcI CTRYAG 4 cut(s) 1272, 1743, 2011, 2634
SinI GGWCC 3 cut(s) 341, 1235, 1541
SmiMI CAYNNNNRTG 4 cut(s) 555, 1451, 1882, 2166
SmlI CTYRAG 4 cut(s) 865, 1487, 1767, 2066
SmoI CTYRAG 4 cut(s) 865, 1487, 1767, 2066
SseBI AGGCCT 2 cut(s) 507, 609
SsiI CCGC 6 cut(s) 50, 266, 942, 1536, 1539, 1691
SstI GAGCTC 1 cut(s) 1803
StuI AGGCCT 2 cut(s) 507, 609
StyD4I CCNGG 3 cut(s) 24, 336, 1663
StyI CCWWGG 6 cut(s) 508, 610, 1065, 1519, 1582, 2301
TaaI ACNGT 2 cut(s) 332, 2705
TaiI ACGT 1 cut(s) 2136
TaqI TCGA 4 cut(s) 229, 687, 806, 1435
TatI WGTACW 2 cut(s) 1146, 2079
TauI GCSGC 3 cut(s) 53, 1539, 1694
TfiI GAWTC 6 cut(s) 547, 1075, 1456, 1821, 2279, 2600
Tru1I TTAA 4 cut(s) 87, 791, 1967, 2646
Tru9I TTAA 4 cut(s) 87, 791, 1967, 2646
TscAI CASTG 3 cut(s) 145, 562, 889
TseFI GTSAC 4 cut(s) 140, 232, 1979, 2350
TseI GCWGC 7 cut(s) 57, 71, 861, 1268, 1745, 2010, 2681
Tsp45I GTSAC 4 cut(s) 140, 232, 1979, 2350
TspDTI ATGAA 5 cut(s) 560, 1779, 1842, 2147, 2184
TspRI CASTG 3 cut(s) 145, 562, 889
Van91I CCANNNNNTGG 2 cut(s) 1704, 2333
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 3 cut(s) 341, 1235, 1541
XagI CCTNNNNNAGG 1 cut(s) 285
XapI RAATTY 7 cut(s) 373, 757, 895, 1159, 1498, 1527, 2467
XbaI TCTAGA 2 cut(s) 1372, 1468
XceI RCATGY 4 cut(s) 1811, 2053, 2240, 2626
XcmI CCANNNNNNNNNTGG 3 cut(s) 525, 1179, 1589
XmaJI CCTAGG 1 cut(s) 610
XmiI GTMKAC 1 cut(s) 30
XmnI GAANNNNTTC 1 cut(s) 1786
Zsp2I ATGCAT 1 cut(s) 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.