Rw0G000200

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00005
Physical Location & Seq
Forward (+)
80554 .. 83608
3055 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G000200.1

Sequence Viewer

Length: 1908 bp
ATGTTTATCTTTCTTTTAGAAATTCCAAATGAGATCGGTGCTTTAACTCAACTGGAGAAGTTGGCTGTGGAAGAAAACGCCCTAGAAGGAAATGTTCCTATGGTTGTCTTCAACATGTCTTCTTTGATTATTTTGACTCTACATGGAAACAACTTGAAGGGTAGACTTCCAGACAATATGTGTCAGAATCTTCCTCATATTCAAGGGTTGTATTTCAGTCAGAATAAGCTTGAAGGTCCACTTCCATCCATATTTTGGCAATGCAAACAACTTGTTGGTTTAGCACTGTGGCGTAACAACTTCAGCGGAAGCATACCCAAAAATATTGGGAACGCAACCCAGTTAATGCAGCTTGATCTTAGCGAAAATAATTTAACAGAGAATCATTTAACTCTTGAAACTACTACTCCGGAACTAAATGTTCTCTCTTGCTTGAAAAATCTTAAAAATTTGTGGCAGTTAGTCTTCTCAAGCAATCCATTAAATATCAACCTCCCTATTTCCTGCTGGAATCTCTCTACATCACTTCAGGAGGTTTATATGTCCAACTGCAACATGAGAGGTAACATTCCCAATGATATAGGCAACTTGAGCAGCTTGACCATCTTAGCCCTACAAGACAATAAATTAAGTGGATCAATCCCAACGTCAATTGGAAGACTACAAAATCTCCAAGGTTTGGCATTGGGAGATAACAAATTGCAAGGACACATTCCGGTTGAAGTTTGTCGACTACAAAACCTAGCAATCTTAGAGTTGGGTGGTAACCAACTATCTGGCTCTATACCTTCTTGCTTGGGTCATCTAGTCAATCCACTAAGAATTCTATCATTAGGGTCCAATTTGTTGAATTCCACAATACCATCTATCCTATGGGAACTTACAGATATCTTGTATGTAAACTTGTCATCCAATAATCTAAGTGGATCTGTCTCGGAAGATGTTGGTAATCTGAAAGTTGTCATAAATATAGATTTATCGAACAACCACTTATCCGGTAGTATACCAAGCAGCATTGGAAATTTACAAAGCTTGATCAATCTCTCCTTGGCGAATAATAAGTTCGGAGGCCTTATTCCTAGTTCACTTGGCAAGTCCCTCAGCTTGGAACTTTTAGATTTATCCAAAAATAATCTGTCTGGGATAATTCCAAAGTCACTCGAATCCCTAAAATATCTCAAAATTTTGAATTTGTCTTTCAACAAACTCCAAGGAGAAATCCCAATAGGTGGGCCTTTCCGAAACTTATCTGCTCAATCATTTGTGTCGAGTGGGAGACTTTGTGGTGCACCTCGATTTCATGTCCCATCATGCAATAATAGTACATTTGAGGCACATTCAACTAAAGCAAGCACATCCATCTTGAAGTACATTATACCAGTGATCTTGTCAGCAATGTTCATGGTTACCTCCATTTGGATAGTGAAACTACGTAGAAGAAAGAATGTGGAAGCTGCAAAAGAGACAGCATTGTTACCTCAACCTCTATGGAGAAGAGTTTCACACCTGGAACTTGTTAAAGCAACAAATGCATTTGATGAAATCAACTTACTTGGCAGTGGTGGTTTTGGCTCAAGATTGAGTATTATGATTGATGTTGCATCAGCATTAGAATACCTTCATCATGGTTATGAAATACCAATCGTCCACTGTGATTTGAAGCCCAGCAATATCCTACTGGATGCGGATATGAGTGCACATATTGCTGACTTTGGCATTGCAAAGCTCTTGTATGGAAGGGATTCGATGACCCAAACCATCACTCAAGCCACAATTGGATATATGGCCCCAGAATCACCGGAAGTGAGGATGAATATGCAAGAGGCTCTAGCCACGCTGAACAAGATCAAGATCAAGTTTTTGAAGGACGCTGCCGGAGGTGTGGTGTTGAACCGTTCTCTTGTTTAA

Protein Analysis

635

Amino Acids

69.3

Weight (kDa)

7.6

Isoelectric Point (pI)

46.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 180 - 269 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 199 - 258 5.7e-07 Leucine rich repeat
LRR_14 PF23598 273 - 403 3.9e-09 Leucine-rich repeat region
LRR_8 PF13855 344 - 403 1.1e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 526 - 601 1.1e-10 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 528 - 598 2.4e-15 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 255, 679, 1229
AccI GTMKAC 3 cut(s) 163, 730, 1003
AccIII TCCGGA 1 cut(s) 409
AciI CCGC 2 cut(s) 306, 1685
AclWI GGATC 2 cut(s) 643, 934
AcsI RAATTY 7 cut(s) 21, 448, 822, 850, 1021, 1182, 1189
AcuI CTGAAG 2 cut(s) 286, 512
AfaI GTAC 2 cut(s) 1324, 1370
AfiI CCNNNNNNNGG 5 cut(s) 255, 679, 1105, 1229, 1416
AflIII ACRYGT 1 cut(s) 114
AjnI CCWGG 1 cut(s) 1506
AluBI AGCT 7 cut(s) 229, 352, 597, 1032, 1104, 1454, 1726
AluI AGCT 7 cut(s) 229, 352, 597, 1032, 1104, 1454, 1726
Alw21I GWGCWC 2 cut(s) 1291, 1699
Alw26I GTCTC 3 cut(s) 937, 1270, 1457
Alw44I GTGCAC 2 cut(s) 1287, 1695
AlwI GGATC 2 cut(s) 643, 934
Aor13HI TCCGGA 1 cut(s) 409
AoxI GGCC 3 cut(s) 1069, 1232, 1785
ApaLI GTGCAC 2 cut(s) 1287, 1695
ApeKI GCWGC 5 cut(s) 349, 594, 1011, 1454, 1871
ApoI RAATTY 7 cut(s) 21, 448, 822, 850, 1021, 1182, 1189
Asp700I GAANNNNTTC 3 cut(s) 1498, 1617, 1741
AspS9I GGNCC 4 cut(s) 236, 837, 1232, 1786
AsuHPI GGTGA 1 cut(s) 1788
AvaII GGWCC 2 cut(s) 236, 837
BaeGI GKGCMC 2 cut(s) 1291, 1699
BbsI GAAGAC 4 cut(s) 100, 111, 457, 664
Bbv12I GWGCWC 2 cut(s) 1291, 1699
BbvCI CCTCAGC 1 cut(s) 1100
BbvI GCAGC 5 cut(s) 361, 606, 1023, 1441, 1858
BccI CCATC 6 cut(s) 253, 611, 871, 1315, 1367, 1766
BciT130I CCWGG 1 cut(s) 1508
BclI TGATCA 1 cut(s) 1035
BcoDI GTCTC 3 cut(s) 937, 1270, 1457
BfaI CTAG 5 cut(s) 83, 743, 806, 1080, 1829
BisI GCNGC 5 cut(s) 350, 595, 1012, 1455, 1872
BlsI GCNGC 5 cut(s) 351, 596, 1013, 1456, 1873
Bme1390I CCNGG 1 cut(s) 1508
Bme18I GGWCC 2 cut(s) 236, 837
BmgT120I GGNCC 4 cut(s) 236, 837, 1232, 1786
BmiI GGNNCC 2 cut(s) 838, 1788
BmrFI CCNGG 1 cut(s) 1508
BmrI ACTGGG 1 cut(s) 334
BmsI GCATC 2 cut(s) 1610, 1672
BmuI ACTGGG 1 cut(s) 334
BpiI GAAGAC 4 cut(s) 100, 111, 457, 664
BpmI CTGGAG 1 cut(s) 74
Bpu10I CCTNAGC 1 cut(s) 1100
BpuEI CTTGAG 4 cut(s) 454, 610, 1558, 1749
BsaAI YACGTR 1 cut(s) 1433
BsaBI GATNNNNATC 1 cut(s) 1850
BsaJI CCNNGG 3 cut(s) 673, 1047, 1210
BsaWI WCCGGW 4 cut(s) 409, 715, 995, 1798
BsaXI ACNNNNNCTCC 8 cut(s) 391, 421, 654, 684, 1267, 1297, 1869, 1899
Bsc4I CCNNNNNNNGG 5 cut(s) 255, 679, 1105, 1229, 1416
Bse1I ACTGG 4 cut(s) 57, 340, 1379, 1683
Bse3DI GCAATG 3 cut(s) 266, 1401, 1716
Bse8I GATNNNNATC 1 cut(s) 1850
BseAI TCCGGA 1 cut(s) 409
BseBI CCWGG 1 cut(s) 1508
BseDI CCNNGG 3 cut(s) 673, 1047, 1210
BseGI GGATG 5 cut(s) 245, 908, 1355, 1687, 1815
BseJI GATNNNNATC 1 cut(s) 1850
BseLI CCNNNNNNNGG 5 cut(s) 255, 679, 1105, 1229, 1416
BseMI GCAATG 3 cut(s) 266, 1401, 1716
BseMII CTCAG 1 cut(s) 1114
BseNI ACTGG 4 cut(s) 57, 340, 1379, 1683
BseSI GKGCMC 2 cut(s) 1291, 1699
BseXI GCAGC 5 cut(s) 361, 606, 1023, 1441, 1858
BseYI CCCAGC 1 cut(s) 1664
BshFI GGCC 3 cut(s) 1071, 1234, 1787
BsiHKAI GWGCWC 2 cut(s) 1291, 1699
BsiSI CCGG 5 cut(s) 410, 716, 996, 1799, 1875
BslFI GGGAC 2 cut(s) 1081, 1289
BslI CCNNNNNNNGG 5 cut(s) 255, 679, 1105, 1229, 1416
BsmAI GTCTC 3 cut(s) 937, 1270, 1457
BsmFI GGGAC 2 cut(s) 1081, 1289
BsnI GGCC 3 cut(s) 1071, 1234, 1787
Bsp1286I GDGCHC 2 cut(s) 1291, 1699
Bsp13I TCCGGA 1 cut(s) 409
Bsp143I GATC 8 cut(s) 33, 355, 635, 926, 1035, 1383, 1845, 1851
BspACI CCGC 2 cut(s) 306, 1685
BspANI GGCC 3 cut(s) 1071, 1234, 1787
BspCNI CTCAG 1 cut(s) 1113
BspEI TCCGGA 1 cut(s) 409
BspLI GGNNCC 2 cut(s) 838, 1788
BspPI GGATC 2 cut(s) 643, 934
BsrDI GCAATG 3 cut(s) 266, 1401, 1716
BsrI ACTGG 4 cut(s) 57, 340, 1379, 1683
BssECI CCNNGG 3 cut(s) 673, 1047, 1210
BssMI GATC 8 cut(s) 33, 355, 635, 926, 1035, 1383, 1845, 1851
BssNAI GTATAC 1 cut(s) 1004
BssT1I CCWWGG 3 cut(s) 673, 1047, 1210
Bst1107I GTATAC 1 cut(s) 1004
Bst2UI CCWGG 1 cut(s) 1508
Bst4CI ACNGT 3 cut(s) 288, 1652, 1895
Bst6I CTCTTC 1 cut(s) 1489
BstAPI GCANNNNNTGC 2 cut(s) 1529, 1703
BstBAI YACGTR 1 cut(s) 1433
BstC8I GCNNGC 1 cut(s) 1351
BstDEI CTNAG 6 cut(s) 359, 607, 751, 818, 920, 1100
BstEII GGTNACC 2 cut(s) 764, 1405
BstF5I GGATG 5 cut(s) 245, 908, 1355, 1687, 1815
BstKTI GATC 8 cut(s) 36, 358, 638, 929, 1038, 1386, 1848, 1854
BstMAI GTCTC 3 cut(s) 937, 1270, 1457
BstMBI GATC 8 cut(s) 33, 355, 635, 926, 1035, 1383, 1845, 1851
BstMWI GCNNNNNNNGC 3 cut(s) 591, 1529, 1703
BstNI CCWGG 1 cut(s) 1508
BstNSI RCATGY 1 cut(s) 118
BstPI GGTNACC 2 cut(s) 764, 1405
BstSCI CCNGG 1 cut(s) 1506
BstSLI GKGCMC 2 cut(s) 1291, 1699
BstSNI TACGTA 1 cut(s) 1433
BstV1I GCAGC 5 cut(s) 361, 606, 1023, 1441, 1858
BstV2I GAAGAC 4 cut(s) 100, 111, 457, 664
BstX2I RGATCY 1 cut(s) 926
BstXI CCANNNNNNTGG 1 cut(s) 776
BstYI RGATCY 1 cut(s) 926
BstZ17I GTATAC 1 cut(s) 1004
BsuRI GGCC 3 cut(s) 1071, 1234, 1787
BtsCI GGATG 5 cut(s) 245, 908, 1355, 1687, 1815
BtsI GCAGTG 1 cut(s) 1564
BtsIMutI CAGTG 4 cut(s) 284, 1386, 1564, 1648
Cac8I GCNNGC 1 cut(s) 1351
Cfr13I GGNCC 4 cut(s) 236, 837, 1232, 1786
CseI GACGC 1 cut(s) 1877
Csp6I GTAC 2 cut(s) 1323, 1369
CviAII CATG 7 cut(s) 115, 143, 556, 1301, 1311, 1402, 1625
CviQI GTAC 2 cut(s) 1323, 1369
DdeI CTNAG 6 cut(s) 359, 607, 751, 818, 920, 1100
DpnI GATC 8 cut(s) 35, 357, 637, 928, 1037, 1385, 1847, 1853
DpnII GATC 8 cut(s) 33, 355, 635, 926, 1035, 1383, 1845, 1851
Eam1104I CTCTTC 1 cut(s) 1489
EarI CTCTTC 1 cut(s) 1489
Eco105I TACGTA 1 cut(s) 1433
Eco130I CCWWGG 3 cut(s) 673, 1047, 1210
Eco147I AGGCCT 1 cut(s) 1071
Eco32I GATATC 1 cut(s) 889
Eco47I GGWCC 2 cut(s) 236, 837
Eco57I CTGAAG 2 cut(s) 286, 512
Eco91I GGTNACC 2 cut(s) 764, 1405
EcoO65I GGTNACC 2 cut(s) 764, 1405
EcoRI GAATTC 2 cut(s) 822, 850
EcoRII CCWGG 1 cut(s) 1506
EcoRV GATATC 1 cut(s) 889
EcoT14I CCWWGG 3 cut(s) 673, 1047, 1210
EcoT22I ATGCAT 1 cut(s) 1534
ErhI CCWWGG 3 cut(s) 673, 1047, 1210
FaeI CATG 7 cut(s) 118, 146, 559, 1304, 1314, 1405, 1628
FalI AAGNNNNNCTT 2 cut(s) 225, 257
FaqI GGGAC 2 cut(s) 1081, 1289
FatI CATG 7 cut(s) 114, 142, 555, 1300, 1310, 1401, 1624
FbaI TGATCA 1 cut(s) 1035
FblI GTMKAC 3 cut(s) 163, 730, 1003
Fnu4HI GCNGC 5 cut(s) 350, 595, 1012, 1455, 1872
FokI GGATG 5 cut(s) 232, 895, 1342, 1694, 1822
Fsp4HI GCNGC 5 cut(s) 350, 595, 1012, 1455, 1872
FspBI CTAG 5 cut(s) 83, 743, 806, 1080, 1829
GluI GCNGC 5 cut(s) 350, 595, 1012, 1455, 1872
GsaI CCCAGC 1 cut(s) 1668
GsuI CTGGAG 1 cut(s) 74
HaeIII GGCC 3 cut(s) 1071, 1234, 1787
HapII CCGG 5 cut(s) 410, 716, 996, 1799, 1875
HgaI GACGC 1 cut(s) 1877
Hin1II CATG 7 cut(s) 118, 146, 559, 1304, 1314, 1405, 1628
HincII GTYRAC 1 cut(s) 731
HindII GTYRAC 1 cut(s) 731
HindIII AAGCTT 2 cut(s) 227, 1030
HinfI GANTC 7 cut(s) 136, 187, 382, 511, 1163, 1742, 1793
HpaII CCGG 5 cut(s) 410, 716, 996, 1799, 1875
HphI GGTGA 1 cut(s) 1788
Hpy166II GTNNAC 9 cut(s) 164, 239, 731, 901, 1004, 1085, 1289, 1648, 1697
Hpy188I TCNGA 6 cut(s) 186, 222, 937, 954, 1067, 1241
Hpy188III TCNNGA 7 cut(s) 170, 395, 410, 530, 1363, 1575, 1849
Hpy8I GTNNAC 9 cut(s) 164, 239, 731, 901, 1004, 1085, 1289, 1648, 1697
HpyAV CCTTC 7 cut(s) 80, 151, 227, 798, 1628, 1731, 1858
HpyCH4III ACNGT 3 cut(s) 288, 1652, 1895
HpyCH4IV ACGT 2 cut(s) 647, 1432
HpyF10VI GCNNNNNNNGC 3 cut(s) 591, 1529, 1703
HpyF3I CTNAG 6 cut(s) 359, 607, 751, 818, 920, 1100
HpySE526I ACGT 2 cut(s) 647, 1432
Hsp92II CATG 7 cut(s) 118, 146, 559, 1304, 1314, 1405, 1628
Kpn2I TCCGGA 1 cut(s) 409
Ksp22I TGATCA 1 cut(s) 1035
Kzo9I GATC 8 cut(s) 33, 355, 635, 926, 1035, 1383, 1845, 1851
Lsp1109I GCAGC 5 cut(s) 361, 606, 1023, 1441, 1858
LweI GCATC 2 cut(s) 1610, 1672
MaeI CTAG 5 cut(s) 83, 743, 806, 1080, 1829
MaeII ACGT 2 cut(s) 647, 1432
MaeIII GTNAC 6 cut(s) 293, 563, 764, 1155, 1405, 1473
MalI GATC 8 cut(s) 35, 357, 637, 928, 1037, 1385, 1847, 1853
MboI GATC 8 cut(s) 33, 355, 635, 926, 1035, 1383, 1845, 1851
MboII GAAGA 9 cut(s) 83, 100, 111, 182, 457, 669, 950, 1449, 1506
MfeI CAATTG 2 cut(s) 651, 1773
MflI RGATCY 1 cut(s) 926
MhlI GDGCHC 2 cut(s) 1291, 1699
MlyI GAGTC 1 cut(s) 130
MmeI TCCRAC 1 cut(s) 570
Mph1103I ATGCAT 1 cut(s) 1534
MroI TCCGGA 1 cut(s) 409
MroXI GAANNNNTTC 3 cut(s) 1498, 1617, 1741
MseI TTAA 9 cut(s) 44, 344, 374, 389, 444, 482, 629, 1518, 1906
MslI CAYNNNNRTG 1 cut(s) 1629
MspA1I CMGCKG 1 cut(s) 306
MspI CCGG 5 cut(s) 410, 716, 996, 1799, 1875
MspR9I CCNGG 1 cut(s) 1508
MunI CAATTG 2 cut(s) 651, 1773
MvaI CCWGG 1 cut(s) 1508
MwoI GCNNNNNNNGC 3 cut(s) 591, 1529, 1703
NdeII GATC 8 cut(s) 33, 355, 635, 926, 1035, 1383, 1845, 1851
NlaIII CATG 7 cut(s) 118, 146, 559, 1304, 1314, 1405, 1628
NlaIV GGNNCC 2 cut(s) 838, 1788
NmuCI GTSAC 1 cut(s) 1155
NsiI ATGCAT 1 cut(s) 1534
NspI RCATGY 1 cut(s) 118
PceI AGGCCT 1 cut(s) 1071
PciI ACATGT 1 cut(s) 114
PdmI GAANNNNTTC 3 cut(s) 1498, 1617, 1741
PfeI GAWTC 6 cut(s) 187, 382, 511, 1163, 1742, 1793
PflMI CCANNNNNTGG 3 cut(s) 255, 679, 1229
PkrI GCNGC 5 cut(s) 351, 596, 1013, 1456, 1873
PleI GAGTC 1 cut(s) 130
PpsI GAGTC 1 cut(s) 130
Ppu21I YACGTR 1 cut(s) 1433
PscI ACATGT 1 cut(s) 114
Psp6I CCWGG 1 cut(s) 1506
PspEI GGTNACC 2 cut(s) 764, 1405
PspFI CCCAGC 1 cut(s) 1664
PspGI CCWGG 1 cut(s) 1506
PspN4I GGNNCC 2 cut(s) 838, 1788
PspPI GGNCC 4 cut(s) 236, 837, 1232, 1786
PsuI RGATCY 1 cut(s) 926
RsaI GTAC 2 cut(s) 1324, 1370
RsaNI GTAC 2 cut(s) 1323, 1369
RseI CAYNNNNRTG 1 cut(s) 1629
SalI GTCGAC 1 cut(s) 729
SaqAI TTAA 9 cut(s) 44, 344, 374, 389, 444, 482, 629, 1518, 1906
SatI GCNGC 5 cut(s) 350, 595, 1012, 1455, 1872
Sau3AI GATC 8 cut(s) 33, 355, 635, 926, 1035, 1383, 1845, 1851
Sau96I GGNCC 4 cut(s) 236, 837, 1232, 1786
SchI GAGTC 1 cut(s) 130
ScrFI CCNGG 1 cut(s) 1508
SduI GDGCHC 2 cut(s) 1291, 1699
SfaNI GCATC 2 cut(s) 1610, 1672
SinI GGWCC 2 cut(s) 236, 837
SmiMI CAYNNNNRTG 1 cut(s) 1629
SmlI CTYRAG 4 cut(s) 469, 589, 1573, 1764
SmoI CTYRAG 4 cut(s) 469, 589, 1573, 1764
SnaBI TACGTA 1 cut(s) 1433
SseBI AGGCCT 1 cut(s) 1071
SsiI CCGC 2 cut(s) 306, 1685
SspI AATATT 1 cut(s) 325
SspMI CTAG 5 cut(s) 83, 743, 806, 1080, 1829
StuI AGGCCT 1 cut(s) 1071
StyD4I CCNGG 1 cut(s) 1506
StyI CCWWGG 3 cut(s) 673, 1047, 1210
TaaI ACNGT 3 cut(s) 288, 1652, 1895
TaiI ACGT 2 cut(s) 650, 1435
TaqI TCGA 6 cut(s) 730, 980, 1161, 1268, 1294, 1745
TatI WGTACW 2 cut(s) 1322, 1368
TfiI GAWTC 6 cut(s) 187, 382, 511, 1163, 1742, 1793
Tru1I TTAA 9 cut(s) 44, 344, 374, 389, 444, 482, 629, 1518, 1906
Tru9I TTAA 9 cut(s) 44, 344, 374, 389, 444, 482, 629, 1518, 1906
TscAI CASTG 4 cut(s) 291, 1386, 1564, 1655
TseFI GTSAC 1 cut(s) 1155
TseI GCWGC 5 cut(s) 349, 594, 1011, 1454, 1871
Tsp45I GTSAC 1 cut(s) 1155
TspDTI ATGAA 6 cut(s) 1289, 1390, 1554, 1610, 1647, 1826
TspRI CASTG 4 cut(s) 291, 1386, 1564, 1655
Van91I CCANNNNNTGG 3 cut(s) 255, 679, 1229
VneI GTGCAC 2 cut(s) 1287, 1695
VpaK11BI GGWCC 2 cut(s) 236, 837
XapI RAATTY 7 cut(s) 21, 448, 822, 850, 1021, 1182, 1189
XceI RCATGY 1 cut(s) 118
XcmI CCANNNNNNNNNTGG 2 cut(s) 252, 870
XmiI GTMKAC 3 cut(s) 163, 730, 1003
XmnI GAANNNNTTC 3 cut(s) 1498, 1617, 1741
XspI CTAG 5 cut(s) 83, 743, 806, 1080, 1829
Zsp2I ATGCAT 1 cut(s) 1534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.