Rh6AG217100

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000058
Physical Location & Seq
Forward (+)
38868331 .. 38870343
2013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG217100.1

Sequence Viewer

Length: 2013 bp
ATGTCCACAATAGCAGTGATATCGCTTTTCGAGAATCAGCTCTCAGGCAACCTTCCACCAAACACAGGCCTTGGCCTTCCAAACCTACAACGCTTCTATCTAGGAGGAAATAAACTTAGCGGAGCAATCCCCAAATCTTTGTCCAATGCTTCTAACCTGGAGCTCATAGACCTAGGCAGCAACCTATTATTTGGCGTTATTCCTAGCACCCTATGTACCTTGACAAAACTTCAGCTGCTTCAACTATTTGATAATAACCTGACCGTCAGTACTTCGACTCCAGAACTGGATGTTCTCTTTTGTTTGGCAAATCTTCGCAACTTGAGGAGACTAGACTTCTCAGTGAATCCATTAGATGCCAACCTTCCTATTTCCTTTACGAATACATCTCTTCAATATATTTATTTTTACAACTGCAACATGAGGGGTGAAATTCCCAATGACATCGGCAACTTGAGCAGCTTGATAGTATTATCTGTGCTAAAGAATCAATTAAGTGGATTGGTTCCAGCCTCAATAGGAAGAATCCGAAACCTCCAAGGTCTATATTTGGAAAGTAACACATTTCAAGGACGCATGCCAGATGAACTCTGCCAACTGAAAAACCTAGGTTCTTTGTTTTTGGGTGGCAATCGACTGTCTGGCTCTATACCTTCATGCATCGGCAATCTAACTGGAGCTCTAAGGAAACTATCATTGGAGTCTAATTTGTTAACTTCTACAGTACCATCTACCTTGTGGGGACTTACATATATCCTGTACTTGAACTTGTCATCGAATTCTCTGATCGGGTCTATCGGAGAAGGTGTTGGTAATTTGAAAGTTGCCACAGATATAGATTTTTCAAACAACCGATTATCCGGTAGTATAGCAAGCAGCGTTGGTGGACTTCAAAACTTGGTCAATCTGTCCTTGGCAAATAATAAACTACAAGGCTCCATTCCTACTTCACTTGGCAATTGCATAAGCCTGGAATCTTTGGACTTATCCAAAAACAACTTATCAGGAGTGATTCCCAACTCTCTTTCAGCGCTCTCATATCTGAAGTATTTGAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAACAGGTGGTCCTTTCAGAAACTTGTCTACTCAATCATTTGTTTCAAACCATGGACTCTGTGGTGCAGCCCGATTTCAAGTTCCATCATGCAAAAGGAAGACTGTTAAAACTATTTTCAAGTATGTTATTCCGGGTATCTTGTCCGCAATGCTTCTAGTGACCTCCATTTGGATATTTATTAAATCGAGAAAGAAGAATGTGAAAGCTGCAACAGAGACTACCTTTTTGCCACAACATCAGTGGAGAAGAGTTTCCTATGAAGAGCTTCTTAGTGCAACAAGTGGATTCAATGTGAGCAACTTACTTGGCACTGGGAGTTTTGGCTCAGTATATAAAGGAACACTGTCAGATGGGATAGATGTTGCCATTAAGGTGTATAATTTAGACACAGAAGGGGCATTCTCAAGTTTTGATGTCGAATGCGAAATGCTAAGCAATATTCGCCATCGAAACCTTATCAAAGTCATCAGTTGCTGCAGTCAAGTTGATTTCAAAGCCGTTGTACTAAACTACATGCCTAATGGGAGCCTTGAAAAGTGGTTGTATTCTCATAACTTAACCTTGAACATCTTGCAGAGGTTGAATATATTGATAGATGTTGCAACGGCATTGGAGTATCTCCATCATGGTTATGATAGACCTATTGTGCATTGTGATCTGAAGCCAAGCAACATACTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGTATCGCAAAACTCTTGGGTGGAGAGGATTCTATCACTCGAACCTTGACCCTTGCCACAATCGGGTACATGGCTCCAGGTGATGTAGTGTTAGTAGTTAATCTTTCAATTTTATATATATTCTCCTTAACTAAGAAATTTTGTTTTCATCATATATATTGCAGAGTATGGAATGGATGGAATAGTGACCAGAAGAGGGGATATGTATAG

Protein Analysis

670

Amino Acids

73.24

Weight (kDa)

8.78

Isoelectric Point (pI)

34.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 27 - 87 2e-06 Leucine rich repeat
LRR_14 PF23598 130 - 234 2.6e-07 Leucine-rich repeat region
LRR_14 PF23598 228 - 358 4.1e-08 Leucine-rich repeat region
LRR_8 PF13855 299 - 358 7e-09 Leucine rich repeat
Pkinase PF00069 460 - 627 7.5e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 461 - 627 8.2e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1094
AccI GTMKAC 1 cut(s) 1115
AciI CCGC 2 cut(s) 120, 1233
AcsI RAATTY 5 cut(s) 432, 778, 1054, 1083, 1940
AcuI CTGAAG 3 cut(s) 215, 1064, 1769
AfaI GTAC 6 cut(s) 217, 271, 726, 761, 1593, 1871
AfeI AGCGCT 1 cut(s) 1032
AfiI CCNNNNNNNGG 5 cut(s) 65, 1094, 1257, 1866, 1999
AflIII ACRYGT 1 cut(s) 1789
AjnI CCWGG 3 cut(s) 156, 969, 1879
AjuI GAANNNNNNNTTGG 4 cut(s) 680, 712, 1068, 1100
AluBI AGCT 7 cut(s) 40, 163, 235, 462, 680, 1295, 1354
AluI AGCT 7 cut(s) 40, 163, 235, 462, 680, 1295, 1354
Alw21I GWGCWC 2 cut(s) 165, 682
Alw26I GTCTC 2 cut(s) 322, 1298
AlwNI CAGNNNCTG 1 cut(s) 1563
Aor51HI AGCGCT 1 cut(s) 1032
AoxI GGCC 2 cut(s) 67, 73
ApeKI GCWGC 7 cut(s) 177, 235, 459, 876, 1154, 1295, 1563
ApoI RAATTY 5 cut(s) 432, 778, 1054, 1083, 1940
ArsI GACNNNNNNTTYG 2 cut(s) 1297, 1329
Asp700I GAANNNNTTC 2 cut(s) 1339, 1353
AspA2I CCTAGG 2 cut(s) 172, 607
AspLEI GCGC 1 cut(s) 1033
AspS9I GGNCC 1 cut(s) 1097
AsuC2I CCSGG 1 cut(s) 1221
AsuHPI GGTGA 2 cut(s) 440, 1895
AvaII GGWCC 1 cut(s) 1097
AvrII CCTAGG 2 cut(s) 172, 607
BanII GRGCYC 2 cut(s) 165, 682
BbsI GAAGAC 1 cut(s) 1193
Bbv12I GWGCWC 2 cut(s) 165, 682
BbvI GCAGC 7 cut(s) 189, 222, 471, 888, 1166, 1282, 1550
BccI CCATC 6 cut(s) 736, 1180, 1433, 1542, 1719, 1974
BceAI ACGGC 2 cut(s) 1571, 1710
BcgI CGANNNNNNTGC 1 cut(s) 37
BciT130I CCWGG 3 cut(s) 158, 971, 1881
BcnI CCSGG 1 cut(s) 1221
BcoDI GTCTC 2 cut(s) 322, 1298
BfaI CTAG 7 cut(s) 101, 173, 204, 332, 608, 1244, 1769
BfmI CTRYAG 2 cut(s) 720, 1564
BfoI RGCGCY 1 cut(s) 1034
BisI GCNGC 7 cut(s) 178, 236, 460, 877, 1155, 1296, 1564
BlnI CCTAGG 2 cut(s) 172, 607
BlpI GCTNAGC 1 cut(s) 1520
BlsI GCNGC 7 cut(s) 179, 237, 461, 878, 1156, 1297, 1565
BmcAI AGTACT 1 cut(s) 271
Bme1390I CCNGG 4 cut(s) 158, 971, 1221, 1881
Bme18I GGWCC 1 cut(s) 1097
BmgT120I GGNCC 1 cut(s) 1097
BmiI GGNNCC 4 cut(s) 507, 937, 1616, 1878
BmrFI CCNGG 4 cut(s) 158, 971, 1221, 1881
BmrI ACTGGG 1 cut(s) 1410
BmsI GCATC 2 cut(s) 346, 669
BmuI ACTGGG 1 cut(s) 1410
BpiI GAAGAC 1 cut(s) 1193
BpmI CTGGAG 4 cut(s) 179, 264, 696, 1863
Bpu1102I GCTNAGC 1 cut(s) 1520
BpuEI CTTGAG 3 cut(s) 343, 475, 1477
BpuMI CCSGG 1 cut(s) 1221
BsaJI CCNNGG 7 cut(s) 70, 172, 538, 607, 912, 1075, 1138
BsaWI WCCGGW 1 cut(s) 860
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 792, 822
Bsc4I CCNNNNNNNGG 5 cut(s) 65, 1094, 1257, 1866, 1999
Bse1I ACTGG 3 cut(s) 291, 679, 1405
Bse3DI GCAATG 1 cut(s) 1242
BseBI CCWGG 3 cut(s) 158, 971, 1881
BseDI CCNNGG 7 cut(s) 70, 172, 538, 607, 912, 1075, 1138
BseGI GGATG 2 cut(s) 295, 1985
BseLI CCNNNNNNNGG 5 cut(s) 65, 1094, 1257, 1866, 1999
BseMI GCAATG 1 cut(s) 1242
BseMII CTCAG 3 cut(s) 57, 354, 1428
BseNI ACTGG 3 cut(s) 291, 679, 1405
BseRI GAGGAG 1 cut(s) 340
BseXI GCAGC 7 cut(s) 189, 222, 471, 888, 1166, 1282, 1550
BsgI GTGCAG 1 cut(s) 1173
BshFI GGCC 2 cut(s) 69, 75
BsiHKAI GWGCWC 2 cut(s) 165, 682
BsiSI CCGG 2 cut(s) 861, 1220
BslFI GGGAC 1 cut(s) 756
BslI CCNNNNNNNGG 5 cut(s) 65, 1094, 1257, 1866, 1999
BsmAI GTCTC 2 cut(s) 322, 1298
BsmFI GGGAC 1 cut(s) 756
BsmI GAATGC 2 cut(s) 1487, 1514
BsnI GGCC 2 cut(s) 69, 75
Bsp1286I GDGCHC 2 cut(s) 165, 682
Bsp143I GATC 2 cut(s) 786, 1744
Bsp1720I GCTNAGC 1 cut(s) 1520
Bsp19I CCATGG 1 cut(s) 1138
BspACI CCGC 2 cut(s) 120, 1233
BspANI GGCC 2 cut(s) 69, 75
BspCNI CTCAG 3 cut(s) 56, 353, 1427
BspLI GGNNCC 4 cut(s) 507, 937, 1616, 1878
BspMAI CTGCAG 1 cut(s) 1568
BspQI GCTCTTC 1 cut(s) 1344
BsrDI GCAATG 1 cut(s) 1242
BsrI ACTGG 3 cut(s) 291, 679, 1405
BssECI CCNNGG 7 cut(s) 70, 172, 538, 607, 912, 1075, 1138
BssMI GATC 2 cut(s) 786, 1744
BssT1I CCWWGG 7 cut(s) 70, 172, 538, 607, 912, 1075, 1138
Bst2UI CCWGG 3 cut(s) 158, 971, 1881
Bst4CI ACNGT 5 cut(s) 265, 639, 724, 1192, 1434
Bst6I CTCTTC 4 cut(s) 396, 1330, 1344, 1991
BstAPI GCANNNNNTGC 1 cut(s) 1793
BstC8I GCNNGC 2 cut(s) 578, 874
BstDEI CTNAG 8 cut(s) 43, 116, 340, 683, 1358, 1414, 1520, 1935
BstDSI CCRYGG 1 cut(s) 1138
BstF5I GGATG 2 cut(s) 295, 1985
BstH2I RGCGCY 1 cut(s) 1034
BstHHI GCGC 1 cut(s) 1033
BstKTI GATC 2 cut(s) 789, 1747
BstMAI GTCTC 2 cut(s) 322, 1298
BstMBI GATC 2 cut(s) 786, 1744
BstMWI GCNNNNNNNGC 3 cut(s) 456, 1530, 1793
BstNI CCWGG 3 cut(s) 158, 971, 1881
BstNSI RCATGY 3 cut(s) 580, 1606, 1793
BstSCI CCNGG 4 cut(s) 156, 969, 1219, 1879
BstSFI CTRYAG 2 cut(s) 720, 1564
BstV1I GCAGC 7 cut(s) 189, 222, 471, 888, 1166, 1282, 1550
BstV2I GAAGAC 1 cut(s) 1193
BsuRI GGCC 2 cut(s) 69, 75
BtgI CCRYGG 1 cut(s) 1138
BtsCI GGATG 2 cut(s) 295, 1985
BtsI GCAGTG 1 cut(s) 21
BtsIMutI CAGTG 5 cut(s) 21, 348, 1334, 1398, 1430
Cac8I GCNNGC 2 cut(s) 578, 874
CaiI CAGNNNCTG 1 cut(s) 1563
CfoI GCGC 1 cut(s) 1033
Cfr13I GGNCC 1 cut(s) 1097
CseI GACGC 1 cut(s) 582
Csp6I GTAC 6 cut(s) 216, 270, 725, 760, 1592, 1870
CspCI CAANNNNNGTGG 2 cut(s) 1310, 1345
CviAII CATG 9 cut(s) 421, 577, 657, 1139, 1176, 1603, 1715, 1790, 1873
CviQI GTAC 6 cut(s) 216, 270, 725, 760, 1592, 1870
DdeI CTNAG 8 cut(s) 43, 116, 340, 683, 1358, 1414, 1520, 1935
DpnI GATC 2 cut(s) 788, 1746
DpnII GATC 2 cut(s) 786, 1744
Eam1104I CTCTTC 4 cut(s) 396, 1330, 1344, 1991
EarI CTCTTC 4 cut(s) 396, 1330, 1344, 1991
Ecl136II GAGCTC 2 cut(s) 163, 680
Eco130I CCWWGG 7 cut(s) 70, 172, 538, 607, 912, 1075, 1138
Eco147I AGGCCT 1 cut(s) 69
Eco24I GRGCYC 2 cut(s) 165, 682
Eco32I GATATC 1 cut(s) 21
Eco47I GGWCC 1 cut(s) 1097
Eco47III AGCGCT 1 cut(s) 1032
Eco53kI GAGCTC 2 cut(s) 163, 680
Eco57I CTGAAG 3 cut(s) 215, 1064, 1769
EcoICRI GAGCTC 2 cut(s) 163, 680
EcoRI GAATTC 1 cut(s) 778
EcoRII CCWGG 3 cut(s) 156, 969, 1879
EcoRV GATATC 1 cut(s) 21
EcoT14I CCWWGG 7 cut(s) 70, 172, 538, 607, 912, 1075, 1138
EcoT22I ATGCAT 1 cut(s) 662
EcoT38I GRGCYC 2 cut(s) 165, 682
ErhI CCWWGG 7 cut(s) 70, 172, 538, 607, 912, 1075, 1138
FaeI CATG 9 cut(s) 424, 580, 660, 1142, 1179, 1606, 1718, 1793, 1876
FalI AAGNNNNNCTT 2 cut(s) 1341, 1373
FaqI GGGAC 1 cut(s) 756
FatI CATG 9 cut(s) 420, 576, 656, 1138, 1175, 1602, 1714, 1789, 1872
FblI GTMKAC 1 cut(s) 1115
Fnu4HI GCNGC 7 cut(s) 178, 236, 460, 877, 1155, 1296, 1564
FokI GGATG 2 cut(s) 302, 1992
FriOI GRGCYC 2 cut(s) 165, 682
Fsp4HI GCNGC 7 cut(s) 178, 236, 460, 877, 1155, 1296, 1564
FspBI CTAG 7 cut(s) 101, 173, 204, 332, 608, 1244, 1769
GlaI GCGC 1 cut(s) 1032
GluI GCNGC 7 cut(s) 178, 236, 460, 877, 1155, 1296, 1564
GsuI CTGGAG 4 cut(s) 179, 264, 696, 1863
HaeII RGCGCY 1 cut(s) 1034
HaeIII GGCC 2 cut(s) 69, 75
HapII CCGG 2 cut(s) 861, 1220
HgaI GACGC 1 cut(s) 582
HhaI GCGC 1 cut(s) 1033
Hin1II CATG 9 cut(s) 424, 580, 660, 1142, 1179, 1606, 1718, 1793, 1876
Hin6I GCGC 1 cut(s) 1031
HinP1I GCGC 1 cut(s) 1031
HincII GTYRAC 1 cut(s) 714
HindII GTYRAC 1 cut(s) 714
HpaI GTTAAC 1 cut(s) 714
HpaII CCGG 2 cut(s) 861, 1220
HphI GGTGA 2 cut(s) 440, 1895
Hpy166II GTNNAC 4 cut(s) 6, 714, 887, 1116
Hpy188I TCNGA 7 cut(s) 530, 786, 800, 1044, 1106, 1438, 1749
Hpy188III TCNNGA 4 cut(s) 31, 281, 1005, 1275
Hpy8I GTNNAC 4 cut(s) 6, 714, 887, 1116
HpyAV CCTTC 6 cut(s) 62, 86, 374, 663, 797, 1475
HpyCH4III ACNGT 5 cut(s) 265, 639, 724, 1192, 1434
HpyF10VI GCNNNNNNNGC 3 cut(s) 456, 1530, 1793
HpyF3I CTNAG 8 cut(s) 43, 116, 340, 683, 1358, 1414, 1520, 1935
Hsp92II CATG 9 cut(s) 424, 580, 660, 1142, 1179, 1606, 1718, 1793, 1876
HspAI GCGC 1 cut(s) 1031
KspAI GTTAAC 1 cut(s) 714
Kzo9I GATC 2 cut(s) 786, 1744
LguI GCTCTTC 1 cut(s) 1344
LmnI GCTCC 6 cut(s) 122, 160, 677, 941, 1614, 1882
Lsp1109I GCAGC 7 cut(s) 189, 222, 471, 888, 1166, 1282, 1550
LweI GCATC 2 cut(s) 346, 669
MaeI CTAG 7 cut(s) 101, 173, 204, 332, 608, 1244, 1769
MaeIII GTNAC 3 cut(s) 557, 1246, 1988
MalI GATC 2 cut(s) 788, 1746
MboI GATC 2 cut(s) 786, 1744
MboII GAAGA 8 cut(s) 305, 383, 534, 1198, 1294, 1347, 1361, 2008
MfeI CAATTG 1 cut(s) 958
MhlI GDGCHC 2 cut(s) 165, 682
MlyI GAGTC 4 cut(s) 271, 710, 1065, 1137
MmeI TCCRAC 1 cut(s) 1112
MnlI CCTC 9 cut(s) 98, 318, 417, 523, 545, 1261, 1659, 1822, 1992
Mph1103I ATGCAT 1 cut(s) 662
MroXI GAANNNNTTC 2 cut(s) 1339, 1353
MseI TTAA 8 cut(s) 494, 713, 1194, 1269, 1458, 1646, 1902, 1931
MslI CAYNNNNRTG 2 cut(s) 1460, 1719
MspA1I CMGCKG 1 cut(s) 235
MspI CCGG 2 cut(s) 861, 1220
MspR9I CCNGG 4 cut(s) 158, 971, 1221, 1881
MunI CAATTG 1 cut(s) 958
Mva1269I GAATGC 2 cut(s) 1487, 1514
MvaI CCWGG 3 cut(s) 158, 971, 1881
MwoI GCNNNNNNNGC 3 cut(s) 456, 1530, 1793
NciI CCSGG 1 cut(s) 1221
NcoI CCATGG 1 cut(s) 1138
NdeII GATC 2 cut(s) 786, 1744
NlaIII CATG 9 cut(s) 424, 580, 660, 1142, 1179, 1606, 1718, 1793, 1876
NlaIV GGNNCC 4 cut(s) 507, 937, 1616, 1878
NmuCI GTSAC 2 cut(s) 1246, 1988
NsiI ATGCAT 1 cut(s) 662
NspI RCATGY 3 cut(s) 580, 1606, 1793
PaeI GCATGC 1 cut(s) 580
PceI AGGCCT 1 cut(s) 69
PciI ACATGT 1 cut(s) 1789
PciSI GCTCTTC 1 cut(s) 1344
PctI GAATGC 2 cut(s) 1487, 1514
PdmI GAANNNNTTC 2 cut(s) 1339, 1353
PfeI GAWTC 8 cut(s) 34, 346, 487, 525, 974, 1012, 1374, 1832
PflMI CCANNNNNTGG 1 cut(s) 1094
PkrI GCNGC 7 cut(s) 179, 237, 461, 878, 1156, 1297, 1565
PleI GAGTC 4 cut(s) 271, 709, 1065, 1137
PpsI GAGTC 4 cut(s) 271, 709, 1065, 1137
PscI ACATGT 1 cut(s) 1789
Psp124BI GAGCTC 2 cut(s) 165, 682
Psp6I CCWGG 3 cut(s) 156, 969, 1879
PspGI CCWGG 3 cut(s) 156, 969, 1879
PspN4I GGNNCC 4 cut(s) 507, 937, 1616, 1878
PspPI GGNCC 1 cut(s) 1097
PstI CTGCAG 1 cut(s) 1568
PstNI CAGNNNCTG 1 cut(s) 1563
PvuII CAGCTG 1 cut(s) 235
RsaI GTAC 6 cut(s) 217, 271, 726, 761, 1593, 1871
RsaNI GTAC 6 cut(s) 216, 270, 725, 760, 1592, 1870
RseI CAYNNNNRTG 2 cut(s) 1460, 1719
SacI GAGCTC 2 cut(s) 165, 682
SapI GCTCTTC 1 cut(s) 1344
SaqAI TTAA 8 cut(s) 494, 713, 1194, 1269, 1458, 1646, 1902, 1931
SatI GCNGC 7 cut(s) 178, 236, 460, 877, 1155, 1296, 1564
Sau3AI GATC 2 cut(s) 786, 1744
Sau96I GGNCC 1 cut(s) 1097
ScaI AGTACT 1 cut(s) 271
SchI GAGTC 4 cut(s) 271, 710, 1065, 1137
ScrFI CCNGG 4 cut(s) 158, 971, 1221, 1881
SduI GDGCHC 2 cut(s) 165, 682
SfaNI GCATC 2 cut(s) 346, 669
SfcI CTRYAG 2 cut(s) 720, 1564
SinI GGWCC 1 cut(s) 1097
SmiMI CAYNNNNRTG 2 cut(s) 1460, 1719
SmlI CTYRAG 3 cut(s) 322, 454, 1492
SmoI CTYRAG 3 cut(s) 322, 454, 1492
SphI GCATGC 1 cut(s) 580
SseBI AGGCCT 1 cut(s) 69
SsiI CCGC 2 cut(s) 120, 1233
SspI AATATT 1 cut(s) 1528
SspMI CTAG 7 cut(s) 101, 173, 204, 332, 608, 1244, 1769
SstI GAGCTC 2 cut(s) 165, 682
StuI AGGCCT 1 cut(s) 69
StyD4I CCNGG 4 cut(s) 156, 969, 1219, 1879
StyI CCWWGG 7 cut(s) 70, 172, 538, 607, 912, 1075, 1138
TaaI ACNGT 5 cut(s) 265, 639, 724, 1192, 1434
TaqI TCGA 8 cut(s) 30, 275, 634, 776, 1274, 1506, 1537, 1843
TatI WGTACW 3 cut(s) 269, 759, 1591
TfiI GAWTC 8 cut(s) 34, 346, 487, 525, 974, 1012, 1374, 1832
Tru1I TTAA 8 cut(s) 494, 713, 1194, 1269, 1458, 1646, 1902, 1931
Tru9I TTAA 8 cut(s) 494, 713, 1194, 1269, 1458, 1646, 1902, 1931
TscAI CASTG 5 cut(s) 21, 348, 1334, 1405, 1437
TseFI GTSAC 2 cut(s) 1246, 1988
TseI GCWGC 7 cut(s) 177, 235, 459, 876, 1154, 1295, 1563
Tsp45I GTSAC 2 cut(s) 1246, 1988
TspDTI ATGAA 4 cut(s) 600, 645, 1362, 1940
TspRI CASTG 5 cut(s) 21, 348, 1334, 1405, 1437
Van91I CCANNNNNTGG 1 cut(s) 1094
VpaK11BI GGWCC 1 cut(s) 1097
XapI RAATTY 5 cut(s) 432, 778, 1054, 1083, 1940
XceI RCATGY 3 cut(s) 580, 1606, 1793
XcmI CCANNNNNNNNNTGG 3 cut(s) 735, 1145, 1326
XmaJI CCTAGG 2 cut(s) 172, 607
XmiI GTMKAC 1 cut(s) 1115
XmnI GAANNNNTTC 2 cut(s) 1339, 1353
XspI CTAG 7 cut(s) 101, 173, 204, 332, 608, 1244, 1769
ZrmI AGTACT 1 cut(s) 271
Zsp2I ATGCAT 1 cut(s) 662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.