Rw5G007650

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
8140918 .. 8146001
5084 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G007650.1

Sequence Viewer

Length: 3255 bp
ATGGAGAGAATTACTTGGTTCTTCCTGGCCGCGGCTAGCTGCTTAACTATGGCAGCAGCACTAACCAACAGTAATCTCACTACAGATGATGATCCCCATAACATGATCTCCACCAACTGGTCAACCACCACCCCTGTTTGCAACTGGGTTGGTGTTACTTGTGGTGCACGCCACTTTAGAGTGGCAGTCTTGAACCTCTCTTATATGGGACTCACGAGCACCATTCCTCCGGAGCTCGGTAACCTATCGTTCCTTGTTGCGCTAAGCTTGAGAAATAACAGTTTTCATGGTACCTTGCCTTTGGAATTGGGTCGTTTGCGCCGATTGAAGCTCATCAGTTTCAGATTCAACAATTTTATGGGAGCCATTCCATCATGGTTTGGGTCCTTATCCAAACTTGAAACCTTCAATTTGTATGGTAATCGATTTTCAGGCTCCATACCTGCTGCCATCTTCAACTTAACAGCTCTCCAAGTAATCAACCTGAGCTATAACCAGCTATCAGGTAGCATACCAAGAGAAATTGGAAACCTAACAAAGTTGAAGGAGATATACCTTGATAGAAATAATTTCAAAGAAATTCCAAACGAGATTGGAGCCTTGAATCAACTGGAGAGGTTGTTTGTGCAGTTCAATGCCTTAGAAGGGCATGTTCCTCTCGCTGTCTTCAACATGTCTTCTTTGATTACTATGACTTTCTATAGAAACAGTTTGAATGGTAGTCTTCCAGAGAATATATATCAACATCTTCCGAGCATTCAACAGCTGGATTTGGCTCAGAACCAGATTGATGGTCCAATTCCATCCAATATTGGCAACTTAACCCAGATAAGGATGATTGACCTTGGCTGGAATTATTTGACAGGGACTATACCACATGAGATTGGTCATCTTCCAAGTTTAGAGAGATTGAGCCTCGGAATTAATAATCTCAGTGGTCTCATCCCATCCTCGATCTTCAATATTTCCACAATAACATTGATAGATCATCGCGACAATCAGCTCTCAGGCACCCTTCCAGCAAACATAGGCCTTGGGCTTCCAAACCTCCAATTTTTCTTCATAGGAGGAAATAAGCTCAGTGGAGTAATCCCTAAATCCATCTCCAATGCTTCTCAGCTCATAAGGCTAGAGCTTGGCCAAAACTTATTTTCCGGCTTTATTCCTAGTGAGCTCTGTGCCTTAGCAAACCTTTATCGGCTTGCCTTACACCAGAATAATTTGACCATTGATACTTCTATTCCAGAAGTAAATTTTTTCTCTTGTTTGGCAAATCTTAAAGATCTGAGCACATTAGCCTTGTCACACAATCCTTTAAATGCCAAGCTTTCGGTTTCCTTTAGTAATCTCTCAGCATCACTTGAATTCATTTATTTAGGTGACTGCAACATGAGAGGTAACATCCCCAATGATATAGGCAACTTGAGCAACTTAACACTCTTAGACCTTGCGGAAAATAAACTGAGTGGACCAGTTCCAACTTCAATGGGAAGATTACAGAATGTCCAAATTTTGGATGTGCATGGTAATAAATTGCAAGGACACATTCCGGATGAACTTTGTCAACTAATCCATCTAAATGAGTTAAGTCTGTATGGGAATCAACTTACTGGTGCCATACCTGCCTGCTTGGGTGATCTAAATGCAGCTCTTAGAGGTCTATTCTTACAGTCCAATTTGTTAACATCCACAATACCATCTACCTTGTGGGGGTTTTCAGATATCTTGCACTTAAACCTTTCATCCAACTCTCTAGTTGGGCCTCTCTCAGAAGGTTTTGGCAATTTGAAAGTTGTCATCGATGTAGATTTATCAAACAACCAACTGTCTGGCAGCATACCAAGCAGTATTCAGAGTCTACAAAATTTGGTCAATCTGTCCTTGGCAAGTAATAATTTAGAAGGCCCTATTCCTAGTTCCTTTGGAAACTTGCTAAGCTTAGAACGCTTGGATTTATCCCAGAACAATCTCTCTGGAATGATTCCAACGTCTCTAGAAGCACTCTCATATCTCAAGTATCTGAACTTGTCTTTCAACAAATTCCAAGGAGAAATTCCAACAGGCGGACCTTTCACAAACTTGTCTGCTCAATCGTTTGTTTCAAACCGTGGACTCTGTGGTGTATCCCGATTTCATGTTCAACCATGCAAAAGGAAAAGTGGTACATCTATCTTGAAATATGTTATTCCAGGGATCTTGTCAGCAATGCTTCTTGTGATCTCCATAATTTGGTTGGTGATGTTATGCAGAAAAAAGAATGTGGAAGCTACAATAGAGACTACCTACTTGCCGCAACCTCTGTACAGAAGAGTTTCATACCAAGAGCTTCTAAGCGCAACAAATGGATTCAATGTGAGCAACTTACTTGGCACTGGCAGTTTTGGCTCAGTTTATAGAGGAACATTTTCAGATGGGGTAGATGTGGCCACAAAGGTTTTTAATTTAGAAACAGAAGGGGCTTTCACAAGTTTTGATGTTGAATGTGACATGCTAAGCAATATTCGTCACCGAAATCTTATCAAAGTCATCAGTTGCTGCAATCAAAATGATTTCAAAGCTCTTATACTGAATTACATGCCTAATGGGAACCTGGAGAAGTGGTTATATTCACATAACTATTCTTTGAACATGCTGCAGAGGTTGGATATAATGATAAATGTTGCATCAGCTTTGAAGTATCTTCATCACGATTATGAAACACCTATTGTCCATTGTGACTTGAAGCCCAGCAACATATTACTAGATGATGATATGGTTGCACATGTTGCTGACTTTGGCATAGCAAAACTATTAGGCGGAGGAGATTCTATGACTCAAACGATGACGCTAGCGACAATTGGGTATATGGCTCCAGAGTACGGAACGGAAGGGATTGTCACTAGAAGAGGGGATGTGTATAGTTTTGGCATTGTATTGATGGAAACATTCACAAGAAGGAAGCCAACTGATGAGATGTTCGTTGGGGAAATGAGTTTAAAGCAATGGGTTGCAAATTCACTATTTGCAGATGCAATAGTTGAAGTTGTTGATACTAATTTACTTGGGACACAGAAAGATCCTAAATTTGTGAGCTATAATGTTTGCTTCTCATCCATTATGAGATTAGGTGTTGCTTGTTGTGTAGAGTCACCAGAAGAGAGGATAAATATGCAAGAGGCTGTAGCCACGCTGAACAAAATCAAGATCGAGTATGTGAAGGAGAACTGTAGATGGAACCGTCCTCTTATTCATAAGAGCTCATATGATCCATTCTAA

Protein Analysis

1084

Amino Acids

119.52

Weight (kDa)

6.08

Isoelectric Point (pI)

31.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 64 - 166 3e-08 Leucine-rich repeat region
LRR_8 PF13855 108 - 167 9.9e-08 Leucine rich repeat
LRR_14 PF23598 151 - 232 2.8e-07 Leucine-rich repeat region
LRR_14 PF23598 453 - 547 7.4e-07 Leucine-rich repeat region
LRR_14 PF23598 577 - 681 2.2e-07 Leucine-rich repeat region
LRR_8 PF13855 622 - 681 8.9e-09 Leucine rich repeat
Pkinase PF00069 784 - 1055 1.2e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 785 - 1054 6.1e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 451, 1630
Acc65I GGTACC 1 cut(s) 290
AccB1I GGYRCC 3 cut(s) 290, 1010, 1613
AccB7I CCANNNNNTGG 3 cut(s) 117, 1513, 2229
AccI GTMKAC 1 cut(s) 1858
AccII CGCG 2 cut(s) 32, 993
AccIII TCCGGA 2 cut(s) 229, 1549
AciI CCGC 6 cut(s) 30, 32, 1451, 2064, 2291, 2796
AclWI GGATC 4 cut(s) 86, 2201, 3050, 3239
AcoI YGGCCR 3 cut(s) 27, 1138, 2424
AcsI RAATTY 9 cut(s) 579, 1252, 1364, 1509, 1864, 2039, 2052, 2992, 3062
AfaI GTAC 4 cut(s) 292, 2164, 2303, 2858
AflIII ACRYGT 2 cut(s) 672, 2761
AjnI CCWGG 3 cut(s) 24, 2188, 2589
AjuI GAANNNNNNNTTGG 2 cut(s) 2037, 2069
Alw21I GWGCWC 6 cut(s) 169, 221, 237, 1176, 1292, 3239
Alw26I GTCTC 3 cut(s) 944, 1995, 2270
Alw44I GTGCAC 1 cut(s) 165
AlwI GGATC 4 cut(s) 86, 2201, 3050, 3239
AlwNI CAGNNNCTG 1 cut(s) 2535
Aor13HI TCCGGA 2 cut(s) 229, 1549
AoxI GGCC 6 cut(s) 27, 1030, 1138, 1760, 1903, 2424
ApaLI GTGCAC 1 cut(s) 165
ApeKI GCWGC 8 cut(s) 39, 53, 56, 446, 1646, 1833, 2535, 2632
ApoI RAATTY 9 cut(s) 579, 1252, 1364, 1509, 1864, 2039, 2052, 2992, 3062
AseI ATTAAT 1 cut(s) 924
Asp700I GAANNNNTTC 2 cut(s) 2311, 2404
Asp718I GGTACC 1 cut(s) 290
AspLEI GCGC 3 cut(s) 262, 321, 2336
AspS9I GGNCC 6 cut(s) 384, 794, 1469, 1760, 1904, 2066
AsuHPI GGTGA 5 cut(s) 1391, 1646, 2248, 2498, 3120
AsuNHI GCTAGC 2 cut(s) 35, 2827
AvaII GGWCC 4 cut(s) 384, 794, 1469, 2066
BaeGI GKGCMC 1 cut(s) 169
BalI TGGCCA 2 cut(s) 1140, 2426
BanI GGYRCC 3 cut(s) 290, 1010, 1613
BanII GRGCYC 3 cut(s) 237, 1176, 3239
BarI GAAGNNNNNNTAC 2 cut(s) 536, 568
BauI CACGAG 1 cut(s) 214
BbsI GAAGAC 3 cut(s) 658, 669, 716
Bbv12I GWGCWC 6 cut(s) 169, 221, 237, 1176, 1292, 3239
BbvI GCAGC 8 cut(s) 26, 65, 68, 433, 1658, 1845, 2522, 2619
BciT130I CCWGG 3 cut(s) 26, 2190, 2591
BciVI GTATCC 1 cut(s) 2134
BcoDI GTCTC 3 cut(s) 944, 1995, 2270
BfaI CTAG 9 cut(s) 36, 1130, 1167, 1754, 1914, 1994, 2741, 2828, 2880
BfmI CTRYAG 5 cut(s) 81, 700, 2633, 3159, 3205
BfuAI ACCTGC 2 cut(s) 451, 1630
BfuI GTATCC 1 cut(s) 2134
BglII AGATCT 1 cut(s) 1282
BlpI GCTNAGC 3 cut(s) 263, 1934, 2492
Bme1390I CCNGG 3 cut(s) 26, 2190, 2591
Bme18I GGWCC 4 cut(s) 384, 794, 1469, 2066
BmgT120I GGNCC 6 cut(s) 384, 794, 1469, 1760, 1904, 2066
BmrFI CCNGG 3 cut(s) 26, 2190, 2591
BmrI ACTGGG 1 cut(s) 154
BmsI GCATC 3 cut(s) 1364, 2672, 2998
BmtI GCTAGC 2 cut(s) 39, 2831
BmuI ACTGGG 1 cut(s) 154
BpiI GAAGAC 3 cut(s) 658, 669, 716
BpmI CTGGAG 3 cut(s) 632, 2612, 2835
Bpu10I CCTNAGC 2 cut(s) 485, 1183
Bpu1102I GCTNAGC 3 cut(s) 263, 1934, 2492
BpuEI CTTGAG 3 cut(s) 289, 1444, 1997
Bsa29I ATCGAT 2 cut(s) 424, 1800
BsaBI GATNNNNATC 1 cut(s) 90
BsaI GGTCTC 1 cut(s) 944
BsaJI CCNNGG 8 cut(s) 30, 844, 916, 1033, 1881, 2044, 2107, 2189
BsaWI WCCGGW 2 cut(s) 229, 1549
BsaXI ACNNNNNCTCC 8 cut(s) 92, 122, 211, 241, 605, 635, 2585, 2615
Bse1I ACTGG 6 cut(s) 122, 149, 615, 1472, 1615, 2377
Bse3DI GCAATG 2 cut(s) 2211, 2987
Bse8I GATNNNNATC 1 cut(s) 90
BseAI TCCGGA 2 cut(s) 229, 1549
BseBI CCWGG 3 cut(s) 26, 2190, 2591
BseCI ATCGAT 2 cut(s) 424, 1800
BseDI CCNNGG 8 cut(s) 30, 844, 916, 1033, 1881, 2044, 2107, 2189
BseJI GATNNNNATC 1 cut(s) 90
BseMI GCAATG 2 cut(s) 2211, 2987
BseNI ACTGG 6 cut(s) 122, 149, 615, 1472, 1615, 2377
BseRI GAGGAG 1 cut(s) 2814
BseSI GKGCMC 1 cut(s) 169
BseXI GCAGC 8 cut(s) 26, 65, 68, 433, 1658, 1845, 2522, 2619
BseYI CCCAGC 1 cut(s) 2726
BsgI GTGCAG 1 cut(s) 647
Bsh1236I CGCG 2 cut(s) 32, 993
BshFI GGCC 6 cut(s) 29, 1032, 1140, 1762, 1905, 2426
BshNI GGYRCC 3 cut(s) 290, 1010, 1613
BshVI ATCGAT 2 cut(s) 424, 1800
BsiHKAI GWGCWC 6 cut(s) 169, 221, 237, 1176, 1292, 3239
BsiSI CCGG 3 cut(s) 230, 1155, 1550
BslFI GGGAC 3 cut(s) 222, 880, 3058
BsmAI GTCTC 3 cut(s) 944, 1995, 2270
BsmBI CGTCTC 1 cut(s) 1995
BsmFI GGGAC 3 cut(s) 222, 880, 3058
BsmI GAATGC 1 cut(s) 756
BsnI GGCC 6 cut(s) 29, 1032, 1140, 1762, 1905, 2426
Bso31I GGTCTC 1 cut(s) 944
Bsp1286I GDGCHC 6 cut(s) 169, 221, 237, 1176, 1292, 3239
Bsp13I TCCGGA 2 cut(s) 229, 1549
Bsp1407I TGTACA 1 cut(s) 2301
Bsp1720I GCTNAGC 3 cut(s) 263, 1934, 2492
Bsp68I TCGCGA 1 cut(s) 993
BspACI CCGC 6 cut(s) 30, 32, 1451, 2064, 2291, 2796
BspANI GGCC 6 cut(s) 29, 1032, 1140, 1762, 1905, 2426
BspDI ATCGAT 2 cut(s) 424, 1800
BspEI TCCGGA 2 cut(s) 229, 1549
BspFNI CGCG 2 cut(s) 32, 993
BspMAI CTGCAG 1 cut(s) 2637
BspMI ACCTGC 2 cut(s) 451, 1630
BspOI GCTAGC 2 cut(s) 39, 2831
BspPI GGATC 4 cut(s) 86, 2201, 3050, 3239
BspT107I GGYRCC 3 cut(s) 290, 1010, 1613
BspTNI GGTCTC 1 cut(s) 944
BsrDI GCAATG 2 cut(s) 2211, 2987
BsrGI TGTACA 1 cut(s) 2301
BsrI ACTGG 6 cut(s) 122, 149, 615, 1472, 1615, 2377
BssECI CCNNGG 8 cut(s) 30, 844, 916, 1033, 1881, 2044, 2107, 2189
BssSI CACGAG 1 cut(s) 214
BssT1I CCWWGG 4 cut(s) 844, 1033, 1881, 2044
Bst2BI CACGAG 1 cut(s) 214
Bst2UI CCWGG 3 cut(s) 26, 2190, 2591
Bst4CI ACNGT 8 cut(s) 71, 281, 710, 1671, 1827, 2108, 3206, 3218
Bst6I CTCTTC 3 cut(s) 2302, 2878, 3129
BstAPI GCANNNNNTGC 1 cut(s) 2765
BstAUI TGTACA 1 cut(s) 2301
BstC8I GCNNGC 5 cut(s) 37, 169, 1203, 1627, 2829
BstDSI CCRYGG 2 cut(s) 30, 2107
BstEII GGTNACC 1 cut(s) 239
BstFNI CGCG 2 cut(s) 32, 993
BstHHI GCGC 3 cut(s) 262, 321, 2336
BstMAI GTCTC 3 cut(s) 944, 1995, 2270
BstMWI GCNNNNNNNGC 7 cut(s) 1126, 1425, 1622, 1842, 1944, 2382, 2765
BstNI CCWGG 3 cut(s) 26, 2190, 2591
BstNSI RCATGY 6 cut(s) 653, 676, 2491, 2578, 2632, 2765
BstPI GGTNACC 1 cut(s) 239
BstSCI CCNGG 3 cut(s) 24, 2188, 2589
BstSFI CTRYAG 5 cut(s) 81, 700, 2633, 3159, 3205
BstSLI GKGCMC 1 cut(s) 169
BstUI CGCG 2 cut(s) 32, 993
BstV1I GCAGC 8 cut(s) 26, 65, 68, 433, 1658, 1845, 2522, 2619
BstV2I GAAGAC 3 cut(s) 658, 669, 716
BstX2I RGATCY 3 cut(s) 1282, 2193, 3055
BstXI CCANNNNNNTGG 2 cut(s) 791, 1829
BstYI RGATCY 3 cut(s) 1282, 2193, 3055
Bsu15I ATCGAT 2 cut(s) 424, 1800
BsuI GTATCC 1 cut(s) 2134
BsuRI GGCC 6 cut(s) 29, 1032, 1140, 1762, 1905, 2426
BsuTUI ATCGAT 2 cut(s) 424, 1800
BtgI CCRYGG 2 cut(s) 30, 2107
BtgZI GCGATG 1 cut(s) 974
BtsIMutI CAGTG 3 cut(s) 940, 1087, 2370
BtuMI TCGCGA 1 cut(s) 993
BveI ACCTGC 2 cut(s) 451, 1630
Cac8I GCNNGC 5 cut(s) 37, 169, 1203, 1627, 2829
CaiI CAGNNNCTG 1 cut(s) 2535
CfoI GCGC 3 cut(s) 262, 321, 2336
Cfr13I GGNCC 6 cut(s) 384, 794, 1469, 1760, 1904, 2066
Cfr42I CCGCGG 1 cut(s) 33
ClaI ATCGAT 2 cut(s) 424, 1800
CseI GACGC 1 cut(s) 2833
Csp6I GTAC 4 cut(s) 291, 2163, 2302, 2857
CviQI GTAC 4 cut(s) 291, 2163, 2302, 2857
DraI TTTAAA 2 cut(s) 1317, 2976
EaeI YGGCCR 3 cut(s) 27, 1138, 2424
Eam1104I CTCTTC 3 cut(s) 2302, 2878, 3129
EarI CTCTTC 3 cut(s) 2302, 2878, 3129
EciI GGCGGA 2 cut(s) 2079, 2811
Ecl136II GAGCTC 3 cut(s) 235, 1174, 3237
Eco130I CCWWGG 4 cut(s) 844, 1033, 1881, 2044
Eco147I AGGCCT 1 cut(s) 1032
Eco24I GRGCYC 3 cut(s) 237, 1176, 3239
Eco31I GGTCTC 1 cut(s) 944
Eco32I GATATC 1 cut(s) 1723
Eco47I GGWCC 4 cut(s) 384, 794, 1469, 2066
Eco53kI GAGCTC 3 cut(s) 235, 1174, 3237
Eco91I GGTNACC 1 cut(s) 239
EcoICRI GAGCTC 3 cut(s) 235, 1174, 3237
EcoO109I RGGNCCY 2 cut(s) 384, 1904
EcoO65I GGTNACC 1 cut(s) 239
EcoRI GAATTC 1 cut(s) 1364
EcoRII CCWGG 3 cut(s) 24, 2188, 2589
EcoRV GATATC 1 cut(s) 1723
EcoT14I CCWWGG 4 cut(s) 844, 1033, 1881, 2044
EcoT38I GRGCYC 3 cut(s) 237, 1176, 3239
ErhI CCWWGG 4 cut(s) 844, 1033, 1881, 2044
Esp3I CGTCTC 1 cut(s) 1995
FaqI GGGAC 3 cut(s) 222, 880, 3058
FauNDI CATATG 1 cut(s) 3241
FblI GTMKAC 1 cut(s) 1858
FriOI GRGCYC 3 cut(s) 237, 1176, 3239
FspBI CTAG 9 cut(s) 36, 1130, 1167, 1754, 1914, 1994, 2741, 2828, 2880
GlaI GCGC 3 cut(s) 261, 320, 2335
GsaI CCCAGC 1 cut(s) 2730
GsuI CTGGAG 3 cut(s) 632, 2612, 2835
HaeIII GGCC 6 cut(s) 29, 1032, 1140, 1762, 1905, 2426
HapII CCGG 3 cut(s) 230, 1155, 1550
HgaI GACGC 1 cut(s) 2833
HhaI GCGC 3 cut(s) 262, 321, 2336
Hin6I GCGC 3 cut(s) 260, 319, 2334
HinP1I GCGC 3 cut(s) 260, 319, 2334
HincII GTYRAC 3 cut(s) 123, 1565, 1683
HindII GTYRAC 3 cut(s) 123, 1565, 1683
HindIII AAGCTT 3 cut(s) 265, 1325, 1936
HpaI GTTAAC 1 cut(s) 1683
HpaII CCGG 3 cut(s) 230, 1155, 1550
HphI GGTGA 5 cut(s) 1391, 1646, 2248, 2498, 3120
Hpy166II GTNNAC 7 cut(s) 123, 167, 1469, 1565, 1683, 1859, 2111
Hpy8I GTNNAC 7 cut(s) 123, 167, 1469, 1565, 1683, 1859, 2111
HpyCH4III ACNGT 8 cut(s) 71, 281, 710, 1671, 1827, 2108, 3206, 3218
HpyCH4IV ACGT 1 cut(s) 1988
HpyF10VI GCNNNNNNNGC 7 cut(s) 1126, 1425, 1622, 1842, 1944, 2382, 2765
HpySE526I ACGT 1 cut(s) 1988
HspAI GCGC 3 cut(s) 260, 319, 2334
Kpn2I TCCGGA 2 cut(s) 229, 1549
KpnI GGTACC 1 cut(s) 294
KspAI GTTAAC 1 cut(s) 1683
KspI CCGCGG 1 cut(s) 33
LmnI GCTCC 5 cut(s) 232, 362, 440, 596, 2854
Lsp1109I GCAGC 8 cut(s) 26, 65, 68, 433, 1658, 1845, 2522, 2619
LweI GCATC 3 cut(s) 1364, 2672, 2998
MaeI CTAG 9 cut(s) 36, 1130, 1167, 1754, 1914, 1994, 2741, 2828, 2880
MaeII ACGT 1 cut(s) 1988
MfeI CAATTG 1 cut(s) 2835
MflI RGATCY 3 cut(s) 1282, 2193, 3055
MhlI GDGCHC 6 cut(s) 169, 221, 237, 1176, 1292, 3239
MlsI TGGCCA 2 cut(s) 1140, 2426
MluNI TGGCCA 2 cut(s) 1140, 2426
MlyI GAGTC 5 cut(s) 204, 1864, 2106, 2806, 3134
MmeI TCCRAC 5 cut(s) 1502, 1770, 2009, 2081, 2622
Mox20I TGGCCA 2 cut(s) 1140, 2426
MroI TCCGGA 2 cut(s) 229, 1549
MroXI GAANNNNTTC 2 cut(s) 2311, 2404
MscI TGGCCA 2 cut(s) 1140, 2426
MslI CAYNNNNRTG 2 cut(s) 1578, 2691
Msp20I TGGCCA 2 cut(s) 1140, 2426
MspA1I CMGCKG 2 cut(s) 32, 766
MspI CCGG 3 cut(s) 230, 1155, 1550
MspR9I CCNGG 3 cut(s) 26, 2190, 2591
MunI CAATTG 1 cut(s) 2835
Mva1269I GAATGC 1 cut(s) 756
MvaI CCWGG 3 cut(s) 26, 2190, 2591
MvnI CGCG 2 cut(s) 32, 993
MwoI GCNNNNNNNGC 7 cut(s) 1126, 1425, 1622, 1842, 1944, 2382, 2765
NdeI CATATG 1 cut(s) 3241
NheI GCTAGC 2 cut(s) 35, 2827
NmuCI GTSAC 7 cut(s) 1302, 1379, 2483, 2504, 2714, 2875, 3126
NruI TCGCGA 1 cut(s) 993
NspI RCATGY 6 cut(s) 653, 676, 2491, 2578, 2632, 2765
PceI AGGCCT 1 cut(s) 1032
PciI ACATGT 2 cut(s) 672, 2761
PcsI WCGNNNNNNNCGW 1 cut(s) 319
PctI GAATGC 1 cut(s) 756
PdmI GAANNNNTTC 2 cut(s) 2311, 2404
PfeI GAWTC 6 cut(s) 345, 604, 1600, 1981, 2346, 2804
PflMI CCANNNNNTGG 3 cut(s) 117, 1513, 2229
PleI GAGTC 5 cut(s) 204, 1863, 2106, 2806, 3133
PpsI GAGTC 5 cut(s) 204, 1863, 2106, 2806, 3133
PpuMI RGGWCCY 1 cut(s) 384
PscI ACATGT 2 cut(s) 672, 2761
PshBI ATTAAT 1 cut(s) 924
Psp124BI GAGCTC 3 cut(s) 237, 1176, 3239
Psp5II RGGWCCY 1 cut(s) 384
Psp6I CCWGG 3 cut(s) 24, 2188, 2589
PspEI GGTNACC 1 cut(s) 239
PspFI CCCAGC 1 cut(s) 2726
PspGI CCWGG 3 cut(s) 24, 2188, 2589
PspPI GGNCC 6 cut(s) 384, 794, 1469, 1760, 1904, 2066
PspPPI RGGWCCY 1 cut(s) 384
PstI CTGCAG 1 cut(s) 2637
PstNI CAGNNNCTG 1 cut(s) 2535
PsuI RGATCY 3 cut(s) 1282, 2193, 3055
PvuII CAGCTG 1 cut(s) 766
RruI TCGCGA 1 cut(s) 993
RsaI GTAC 4 cut(s) 292, 2164, 2303, 2858
RsaNI GTAC 4 cut(s) 291, 2163, 2302, 2857
RseI CAYNNNNRTG 2 cut(s) 1578, 2691
SacI GAGCTC 3 cut(s) 237, 1176, 3239
SacII CCGCGG 1 cut(s) 33
Sau96I GGNCC 6 cut(s) 384, 794, 1469, 1760, 1904, 2066
SchI GAGTC 5 cut(s) 204, 1864, 2106, 2806, 3134
ScrFI CCNGG 3 cut(s) 26, 2190, 2591
SduI GDGCHC 6 cut(s) 169, 221, 237, 1176, 1292, 3239
SfaNI GCATC 3 cut(s) 1364, 2672, 2998
SfcI CTRYAG 5 cut(s) 81, 700, 2633, 3159, 3205
Sfr303I CCGCGG 1 cut(s) 33
SgrBI CCGCGG 1 cut(s) 33
SinI GGWCC 4 cut(s) 384, 794, 1469, 2066
SmiMI CAYNNNNRTG 2 cut(s) 1578, 2691
SmlI CTYRAG 3 cut(s) 268, 1423, 2012
SmoI CTYRAG 3 cut(s) 268, 1423, 2012
SseBI AGGCCT 1 cut(s) 1032
SsiI CCGC 6 cut(s) 30, 32, 1451, 2064, 2291, 2796
SspI AATATT 3 cut(s) 811, 964, 2500
SspMI CTAG 9 cut(s) 36, 1130, 1167, 1754, 1914, 1994, 2741, 2828, 2880
SstI GAGCTC 3 cut(s) 237, 1176, 3239
StuI AGGCCT 1 cut(s) 1032
StyD4I CCNGG 3 cut(s) 24, 2188, 2589
StyI CCWWGG 4 cut(s) 844, 1033, 1881, 2044
TaaI ACNGT 8 cut(s) 71, 281, 710, 1671, 1827, 2108, 3206, 3218
TaiI ACGT 1 cut(s) 1991
TaqI TCGA 4 cut(s) 424, 953, 1800, 3186
TatI WGTACW 1 cut(s) 2301
TauI GCSGC 3 cut(s) 32, 35, 2293
TfiI GAWTC 6 cut(s) 345, 604, 1600, 1981, 2346, 2804
TscAI CASTG 3 cut(s) 940, 1087, 2377
TseFI GTSAC 7 cut(s) 1302, 1379, 2483, 2504, 2714, 2875, 3126
TseI GCWGC 8 cut(s) 39, 53, 56, 446, 1646, 1833, 2535, 2632
Tsp45I GTSAC 7 cut(s) 1302, 1379, 2483, 2504, 2714, 2875, 3126
TspGWI ACGGA 2 cut(s) 2874, 2879
TspRI CASTG 3 cut(s) 940, 1087, 2377
Van91I CCANNNNNTGG 3 cut(s) 117, 1513, 2229
VneI GTGCAC 1 cut(s) 165
VpaK11BI GGWCC 4 cut(s) 384, 794, 1469, 2066
VspI ATTAAT 1 cut(s) 924
XapI RAATTY 9 cut(s) 579, 1252, 1364, 1509, 1864, 2039, 2052, 2992, 3062
XbaI TCTAGA 1 cut(s) 1993
XceI RCATGY 6 cut(s) 653, 676, 2491, 2578, 2632, 2765
XcmI CCANNNNNNNNNTGG 2 cut(s) 1704, 2230
XmiI GTMKAC 1 cut(s) 1858
XmnI GAANNNNTTC 2 cut(s) 2311, 2404
XspI CTAG 9 cut(s) 36, 1130, 1167, 1754, 1914, 1994, 2741, 2828, 2880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.