Rmu_sc0001023.1_g000049

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001023.1
OG0000058
Physical Location & Seq
Forward (+)
245742 .. 249567
3826 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001023.1_g000049.1.cds

Sequence Viewer

Length: 3336 bp
atgggaaacccacagatactcgtaccatatggactagttgtgttactttacttctcatgcttcctgaagttaacctcatcttcttccagttccaacttcactgatcaaactgatcttcttgccattcaatccaaactcacatttgaccctactgaaactgtcttgggtggcaattggaccaccaacacaagcttctgtgattggattggggtctcttgcagtaaacgaaggcaaagagtcaccgccttggacctgtcatatatgggtctccaaggcacgattgcaccacatgttggcaacctctcctttctggtctcattggatctccgaaacaacagcttctctgggttcctgccgaatgaaatcagccatttacatcgcttgaaggtactcatattgcgtgccaaccagttggagggaaacatccctccaactttgtatcgctgtgaaaagcttgaaatgattagccttgcaataaacaagcttagcggccatatacctaaagagttgggtttcttacccagacttgagcaattattgattggtaacaataatttttctggtggagttccaccaattttgggtaacatttcaacattagaagtattgagtatgcccgatagcggccttactggttcacttccttcttccctgtttaacctgtcttctttagttatgttttgtgtataccaaaattacctttctggaagttttcatgatgttgatctctgccattcttgtcctagacttcaattcctttatcttagtctcaataatttcagtggccggcttcctcacctcagcaattgtacagagcttgtcatattgtccttatcatccaataagtttgtgggaaaaattccagcagatattggcaacttaaaaaaccttgaagtcctttaccttggttttaataacctaacgggtactttacctgctaccataggtaatttgtccaacttagaaacctttgttttaaagcagactaacgttaagggaagcattcctcatgatttaggacgtctttgtagattgatcacatttataattggtaggaatggcctaagcggaccagtgcctccagaaatattcaatatctcctccctgcaagttattgaagcaagagataatgccctttcaggaaagtttccttcctcctctgcagttcggcttcccagcattggattcatctctttttctaacaataaaattactggacaagtcccatcctattttgcaaattttacaaagctctacttatttcaggttaaaaacaactctctctacggaccaattcccaagaattttggtagcttaaatcacctcgaaacccttcatctcgggggaaatcaattagcaggagatcccggagttcctacacttgattttctttcttcgttgtttaattgcccttccctgaaagcattagttctgtctgagaatcctttaaatggcaccataccaaactcctttaaaaattcttcttcttctctccagatgtttctcatagacaggtgccaaattaagggccacatacccaggggaattggttctttgaaaagcttgacgttcctttcatgggataacaacaatctgagtggaaatgtaccagagtcgattggaggtttggagaggctgcaaagattgtatcttggcaacaacagtttagaaggctctattccagacgagctttgtcttttgaggaacctgggagaactatcactagagaataacaaaatctctgaatcaatcccaaattgcataggaaatctcaacctccttcagagagtttccctaagttccaatagattgacatcatcagtaccgttgagtttatggaaccttgaaaatctcctgttcctagatctgtcaaacaattctttttatgggaacttaccttcaagcttgagaaagttgaatgctattcaagacatagatttatctcaaaaccaatttaccggaaacattccaagcaccataggcagtttgcaaaccctgagctctcttaatctgtcacacaacttgtttacaggttctgttccacaaacttttggtgatcagctgaaagggttggaattgttggacttatcattcaataatctttctggtgcaataccaaagtctcttgagaaactcaaatttctcaagtacttaaatctctcgttcaactacctctccggagaggtcccttttgggggacgtttcgtcaacttcaatgcccagtcatttttggagaataaagcactatgtgggagacgagagtttggactcccaccttgcaagactcataggactcaaaaatcaaaagtggccactcgtttgctggccaaatatgttcttccagccattgcatcaacactgattctcatagccctctattgtatgttgacaaggtatggaaaaagaaagagaggcaagactccgagttcagttgaacagttaacaacagtggagcatattgtgatatcatatcaagaactccgtcgggctacaaatggcttttgtgaaagcaacttacttggagtgggaagttttggctcggtgtacaaggggatactgtctaatgagacaaccattgctgtcaaagttcttaagctggaaatggagggtgctgtaaaaagttttgatgcagaatgcaaggtgtggagaacaacccggcataggaatcttgtaaaggtcataactacatgttctagccctgaaataagagctttggtgctgcagtacatgtccaatggcagtcttgagaagtggttatactctcacaactactgtctcagtattctgcaaagagtgagcatgttaatcgatattgcatctgctttggaatatctccatcatggtcaagaagaaaccgtggtgcactgtgatgtgaagcctggcaatgtccttcttgatgaagacatggttgcacatcttgcagactttggtcttgcaaaaattttagcaaaaaacaaagaggaaacacagacaaggaccatcggcactctgggctacgtagcaccaggaaaagtgtccagaagtggtgatgtttatagctttgggataatgttgctggaaataatggcgagaaagaaacctactgatgaaatgtttgctggagaagtgactttgaggcaatgggtaaatgtgtctatccctgataatgttctagaagtggtggatgctggcttattgagcttagaagagggaagagacatgtttgccagagaatctatccttatgtccatcctggaaataggcttgaggtgttccgaagaagtagcagaggatagaatggacattaaggatgtggtgcccaagctcaagaaaataaaagtggcactacaagaatga

Protein Analysis

1111

Amino Acids

122.38

Weight (kDa)

8.52

Isoelectric Point (pI)

37.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1046
AatII GACGTC 1 cut(s) 1024
Acc36I ACCTGC 1 cut(s) 943
AccB1I GGYRCC 3 cut(s) 1454, 1515, 3295
AccB7I CCANNNNNTGG 1 cut(s) 293
AccI GTMKAC 1 cut(s) 687
AccIII TCCGGA 1 cut(s) 2177
AciI CCGC 4 cut(s) 243, 489, 624, 1068
AclI AACGTT 1 cut(s) 990
AclWI GGATC 2 cut(s) 330, 1358
AcoI YGGCCR 4 cut(s) 490, 784, 2310, 2325
AcsI RAATTY 6 cut(s) 858, 1240, 1303, 1477, 2138, 2940
AcuI CTGAAG 2 cut(s) 86, 1766
AcyI GRCGYC 1 cut(s) 1021
AdeI CACNNNGTG 1 cut(s) 2249
AfaI GTAC 9 cut(s) 24, 390, 811, 928, 1608, 1824, 2150, 2546, 2726
AflII CTTAAG 1 cut(s) 2591
AflIII ACRYGT 4 cut(s) 289, 2687, 2727, 3198
AhdI GACNNNNNGTC 1 cut(s) 2204
AhlI ACTAGT 1 cut(s) 34
AjnI CCWGG 5 cut(s) 1538, 1707, 2878, 3004, 3231
AjuI GAANNNNNNNTTGG 2 cut(s) 176, 208
Alw21I GWGCWC 2 cut(s) 2003, 2865
Alw26I GTCTC 9 cut(s) 217, 272, 319, 773, 2127, 2248, 2561, 2780, 3189
Alw44I GTGCAC 1 cut(s) 2861
AlwI GGATC 2 cut(s) 330, 1358
AlwNI CAGNNNCTG 1 cut(s) 2036
Ama87I CYCGRG 1 cut(s) 1340
Aor13HI TCCGGA 1 cut(s) 2177
AoxI GGCC 7 cut(s) 490, 625, 784, 1060, 1528, 2310, 2325
ApaLI GTGCAC 1 cut(s) 2861
ApeKI GCWGC 2 cut(s) 1636, 2719
ApoI RAATTY 6 cut(s) 858, 1240, 1303, 1477, 2138, 2940
Asp700I GAANNNNTTC 2 cut(s) 1332, 1549
AspS9I GGNCC 7 cut(s) 177, 250, 1070, 1289, 1528, 2185, 2976
AsuC2I CCSGG 2 cut(s) 1368, 2656
AsuHPI GGTGA 5 cut(s) 232, 788, 1313, 2066, 3038
AvaI CYCGRG 1 cut(s) 1340
AvaII GGWCC 6 cut(s) 177, 250, 1070, 1289, 2185, 2976
BaeGI GKGCMC 2 cut(s) 2865, 3300
BalI TGGCCA 2 cut(s) 2312, 2327
BanI GGYRCC 3 cut(s) 1454, 1515, 3295
BanII GRGCYC 1 cut(s) 2003
BarI GAAGNNNNNNTAC 2 cut(s) 2741, 2773
BbsI GAAGAC 2 cut(s) 657, 2907
Bbv12I GWGCWC 2 cut(s) 2003, 2865
BbvCI CCTCAGC 1 cut(s) 800
BbvI GCAGC 2 cut(s) 1623, 2706
BccI CCATC 4 cut(s) 1234, 2844, 2987, 3236
BcgI CGANNNNNNTGC 2 cut(s) 2788, 2822
BciT130I CCWGG 5 cut(s) 1540, 1709, 2880, 3006, 3233
BciVI GTATCC 1 cut(s) 2547
BclI TGATCA 3 cut(s) 103, 1035, 2056
BcnI CCSGG 2 cut(s) 1368, 2656
BcoDI GTCTC 9 cut(s) 217, 272, 319, 773, 2127, 2248, 2561, 2780, 3189
BcuI ACTAGT 1 cut(s) 34
BfaI CTAG 6 cut(s) 35, 744, 1724, 1862, 2694, 3152
BfmI CTRYAG 2 cut(s) 1161, 2720
BfrI CTTAAG 1 cut(s) 2591
BfuAI ACCTGC 1 cut(s) 943
BfuI GTATCC 1 cut(s) 2547
BglII AGATCT 1 cut(s) 1864
BisI GCNGC 4 cut(s) 490, 625, 1637, 2720
BlpI GCTNAGC 1 cut(s) 485
BlsI GCNGC 4 cut(s) 491, 626, 1638, 2721
BmcAI AGTACT 1 cut(s) 2150
Bme1390I CCNGG 7 cut(s) 1368, 1540, 1709, 2656, 2880, 3006, 3233
Bme18I GGWCC 6 cut(s) 177, 250, 1070, 1289, 2185, 2976
BmeRI GACNNNNNGTC 1 cut(s) 2204
BmeT110I CYCGRG 1 cut(s) 1340
BmgT120I GGNCC 7 cut(s) 177, 250, 1070, 1289, 1528, 2185, 2976
BmiI GGNNCC 7 cut(s) 350, 1456, 1517, 1706, 1841, 2187, 3297
BmrFI CCNGG 7 cut(s) 1368, 1540, 1709, 2656, 2880, 3006, 3233
BmrI ACTGGG 1 cut(s) 2215
BmsI GCATC 4 cut(s) 2360, 2617, 2825, 3154
BmuI ACTGGG 1 cut(s) 2215
BoxI GACNNNNGTC 1 cut(s) 2928
BpiI GAAGAC 2 cut(s) 657, 2907
BpmI CTGGAG 3 cut(s) 1065, 1478, 3120
Bpu10I CCTNAGC 3 cut(s) 800, 1064, 1997
Bpu1102I GCTNAGC 1 cut(s) 485
BpuEI CTTGAG 7 cut(s) 548, 1927, 2129, 2147, 2765, 3265, 3290
BpuMI CCSGG 2 cut(s) 1368, 2656
Bsa29I ATCGAT 1 cut(s) 2808
BsaAI YACGTR 1 cut(s) 2998
BsaBI GATNNNNATC 2 cut(s) 723, 1813
BsaHI GRCGYC 1 cut(s) 1021
BsaI GGTCTC 3 cut(s) 217, 272, 319
BsaJI CCNNGG 7 cut(s) 246, 271, 904, 1538, 1539, 1708, 2856
BsaWI WCCGGW 2 cut(s) 1958, 2177
BsaXI ACNNNNNCTCC 2 cut(s) 2159, 2189
Bse118I RCCGGY 1 cut(s) 786
Bse1I ACTGG 6 cut(s) 87, 409, 637, 1073, 1219, 2221
Bse3DI GCAATG 4 cut(s) 2346, 2574, 2890, 3125
Bse8I GATNNNNATC 2 cut(s) 723, 1813
BseAI TCCGGA 1 cut(s) 2177
BseBI CCWGG 5 cut(s) 1540, 1709, 2880, 3006, 3233
BseCI ATCGAT 1 cut(s) 2808
BseDI CCNNGG 7 cut(s) 246, 271, 904, 1538, 1539, 1708, 2856
BseGI GGATG 6 cut(s) 423, 836, 1226, 3169, 3228, 3295
BseJI GATNNNNATC 2 cut(s) 723, 1813
BseMI GCAATG 4 cut(s) 2346, 2574, 2890, 3125
BseMII CTCAG 5 cut(s) 814, 1428, 1586, 1988, 2791
BseNI ACTGG 6 cut(s) 87, 409, 637, 1073, 1219, 2221
BseRI GAGGAG 2 cut(s) 1090, 1147
BseSI GKGCMC 2 cut(s) 2865, 3300
BseXI GCAGC 2 cut(s) 1623, 2706
BseYI CCCAGC 1 cut(s) 1175
BshFI GGCC 7 cut(s) 492, 627, 786, 1062, 1530, 2312, 2327
BshNI GGYRCC 3 cut(s) 1454, 1515, 3295
BshVI ATCGAT 1 cut(s) 2808
BsiHKAI GWGCWC 2 cut(s) 2003, 2865
BsiHKCI CYCGRG 1 cut(s) 1340
BsiSI CCGG 5 cut(s) 787, 1368, 1959, 2178, 2656
BslFI GGGAC 3 cut(s) 1208, 2171, 2211
BsmAI GTCTC 9 cut(s) 217, 272, 319, 773, 2127, 2248, 2561, 2780, 3189
BsmBI CGTCTC 1 cut(s) 2248
BsmFI GGGAC 3 cut(s) 1208, 2171, 2211
BsmI GAATGC 3 cut(s) 1002, 1924, 2639
BsnI GGCC 7 cut(s) 492, 627, 786, 1062, 1530, 2312, 2327
Bso31I GGTCTC 3 cut(s) 217, 272, 319
BsoBI CYCGRG 1 cut(s) 1340
Bsp1286I GDGCHC 3 cut(s) 2003, 2865, 3300
Bsp13I TCCGGA 1 cut(s) 2177
Bsp1407I TGTACA 2 cut(s) 809, 2544
Bsp143I GATC 8 cut(s) 103, 112, 322, 724, 1035, 1363, 1864, 2056
Bsp1720I GCTNAGC 1 cut(s) 485
BspACI CCGC 4 cut(s) 243, 489, 624, 1068
BspANI GGCC 7 cut(s) 492, 627, 786, 1062, 1530, 2312, 2327
BspCNI CTCAG 5 cut(s) 813, 1429, 1587, 1989, 2790
BspDI ATCGAT 1 cut(s) 2808
BspEI TCCGGA 1 cut(s) 2177
BspHI TCATGA 2 cut(s) 715, 1009
BspLI GGNNCC 7 cut(s) 350, 1456, 1517, 1706, 1841, 2187, 3297
BspMAI CTGCAG 2 cut(s) 1165, 2724
BspMI ACCTGC 1 cut(s) 943
BspPI GGATC 2 cut(s) 330, 1358
BspT107I GGYRCC 3 cut(s) 1454, 1515, 3295
BspTI CTTAAG 1 cut(s) 2591
BspTNI GGTCTC 3 cut(s) 217, 272, 319
BsrDI GCAATG 4 cut(s) 2346, 2574, 2890, 3125
BsrFI RCCGGY 1 cut(s) 786
BsrGI TGTACA 2 cut(s) 809, 2544
BsrI ACTGG 6 cut(s) 87, 409, 637, 1073, 1219, 2221
BssAI RCCGGY 1 cut(s) 786
BssECI CCNNGG 7 cut(s) 246, 271, 904, 1538, 1539, 1708, 2856
BssMI GATC 8 cut(s) 103, 112, 322, 724, 1035, 1363, 1864, 2056
BssNAI GTATAC 1 cut(s) 688
BssNI GRCGYC 1 cut(s) 1021
BssT1I CCWWGG 3 cut(s) 246, 271, 904
Bst1107I GTATAC 1 cut(s) 688
Bst2UI CCWGG 5 cut(s) 1540, 1709, 2880, 3006, 3233
Bst4CI ACNGT 9 cut(s) 160, 1664, 1827, 2439, 2449, 2559, 2774, 2857, 2867
Bst6I CTCTTC 2 cut(s) 3180, 3187
BstACI GRCGYC 1 cut(s) 1021
BstAFI CTTAAG 1 cut(s) 2591
BstAPI GCANNNNNTGC 1 cut(s) 2918
BstAUI TGTACA 2 cut(s) 809, 2544
BstBAI YACGTR 1 cut(s) 2998
BstC8I GCNNGC 4 cut(s) 402, 788, 2325, 3169
BstDSI CCRYGG 1 cut(s) 2856
BstF5I GGATG 6 cut(s) 423, 836, 1226, 3169, 3228, 3295
BstKTI GATC 8 cut(s) 106, 115, 325, 727, 1038, 1366, 1867, 2059
BstMAI GTCTC 9 cut(s) 217, 272, 319, 773, 2127, 2248, 2561, 2780, 3189
BstMBI GATC 8 cut(s) 103, 112, 322, 724, 1035, 1363, 1864, 2056
BstMWI GCNNNNNNNGC 4 cut(s) 1980, 2918, 2991, 3177
BstNI CCWGG 5 cut(s) 1540, 1709, 2880, 3006, 3233
BstNSI RCATGY 5 cut(s) 293, 2691, 2731, 2803, 3202
BstPAI GACNNNNGTC 1 cut(s) 2928
BstSCI CCNGG 7 cut(s) 1366, 1538, 1707, 2654, 2878, 3004, 3231
BstSFI CTRYAG 2 cut(s) 1161, 2720
BstSLI GKGCMC 2 cut(s) 2865, 3300
BstSNI TACGTA 1 cut(s) 2998
BstV1I GCAGC 2 cut(s) 1623, 2706
BstV2I GAAGAC 2 cut(s) 657, 2907
BstX2I RGATCY 3 cut(s) 322, 1363, 1864
BstXI CCANNNNNNTGG 1 cut(s) 412
BstYI RGATCY 3 cut(s) 322, 1363, 1864
BstZ17I GTATAC 1 cut(s) 688
Bsu15I ATCGAT 1 cut(s) 2808
BsuI GTATCC 1 cut(s) 2547
BsuRI GGCC 7 cut(s) 492, 627, 786, 1062, 1530, 2312, 2327
BsuTUI ATCGAT 1 cut(s) 2808
BtgI CCRYGG 1 cut(s) 2856
BtgZI GCGATG 1 cut(s) 362
BtsCI GGATG 6 cut(s) 423, 836, 1226, 3169, 3228, 3295
BtsIMutI CAGTG 6 cut(s) 99, 787, 1080, 2357, 2454, 2863
BveI ACCTGC 1 cut(s) 943
Cac8I GCNNGC 4 cut(s) 402, 788, 2325, 3169
CaiI CAGNNNCTG 1 cut(s) 2036
CciI TCATGA 2 cut(s) 715, 1009
Cfr10I RCCGGY 1 cut(s) 786
Cfr13I GGNCC 7 cut(s) 177, 250, 1070, 1289, 1528, 2185, 2976
ClaI ATCGAT 1 cut(s) 2808
Csp6I GTAC 9 cut(s) 23, 389, 810, 927, 1607, 1823, 2149, 2545, 2725
CspCI CAANNNNNGTGG 4 cut(s) 561, 596, 1579, 1614
CviQI GTAC 9 cut(s) 23, 389, 810, 927, 1607, 1823, 2149, 2545, 2725
DpnI GATC 8 cut(s) 105, 114, 324, 726, 1037, 1365, 1866, 2058
DpnII GATC 8 cut(s) 103, 112, 322, 724, 1035, 1363, 1864, 2056
DraI TTTAAA 3 cut(s) 978, 1449, 1474
DraIII CACNNNGTG 1 cut(s) 2249
DriI GACNNNNNGTC 1 cut(s) 2204
EaeI YGGCCR 4 cut(s) 490, 784, 2310, 2325
Eam1104I CTCTTC 2 cut(s) 3180, 3187
Eam1105I GACNNNNNGTC 1 cut(s) 2204
EarI CTCTTC 2 cut(s) 3180, 3187
Ecl136II GAGCTC 1 cut(s) 2001
Eco105I TACGTA 1 cut(s) 2998
Eco130I CCWWGG 3 cut(s) 246, 271, 904
Eco24I GRGCYC 1 cut(s) 2003
Eco31I GGTCTC 3 cut(s) 217, 272, 319
Eco32I GATATC 1 cut(s) 2466
Eco47I GGWCC 6 cut(s) 177, 250, 1070, 1289, 2185, 2976
Eco53kI GAGCTC 1 cut(s) 2001
Eco57I CTGAAG 2 cut(s) 86, 1766
Eco88I CYCGRG 1 cut(s) 1340
EcoICRI GAGCTC 1 cut(s) 2001
EcoO109I RGGNCCY 1 cut(s) 2185
EcoRII CCWGG 5 cut(s) 1538, 1707, 2878, 3004, 3231
EcoRV GATATC 1 cut(s) 2466
EcoT14I CCWWGG 3 cut(s) 246, 271, 904
EcoT38I GRGCYC 1 cut(s) 2003
ErhI CCWWGG 3 cut(s) 246, 271, 904
Esp3I CGTCTC 1 cut(s) 2248
FalI AAGNNNNNCTT 2 cut(s) 1241, 1273
FaqI GGGAC 3 cut(s) 1208, 2171, 2211
FauNDI CATATG 1 cut(s) 28
FbaI TGATCA 3 cut(s) 103, 1035, 2056
FblI GTMKAC 1 cut(s) 687
Fnu4HI GCNGC 4 cut(s) 490, 625, 1637, 2720
FokI GGATG 6 cut(s) 410, 823, 1213, 3176, 3215, 3302
FriOI GRGCYC 1 cut(s) 2003
Fsp4HI GCNGC 4 cut(s) 490, 625, 1637, 2720
FspBI CTAG 6 cut(s) 35, 744, 1724, 1862, 2694, 3152
GluI GCNGC 4 cut(s) 490, 625, 1637, 2720
GsaI CCCAGC 1 cut(s) 1179
GsuI CTGGAG 3 cut(s) 1065, 1478, 3120
HaeIII GGCC 7 cut(s) 492, 627, 786, 1062, 1530, 2312, 2327
HapII CCGG 5 cut(s) 787, 1368, 1959, 2178, 2656
Hin1I GRCGYC 1 cut(s) 1021
HincII GTYRAC 4 cut(s) 72, 2209, 2388, 2442
HindII GTYRAC 4 cut(s) 72, 2209, 2388, 2442
HindIII AAGCTT 5 cut(s) 190, 452, 482, 1561, 1903
HpaI GTTAAC 2 cut(s) 72, 2442
HpaII CCGG 5 cut(s) 787, 1368, 1959, 2178, 2656
HphI GGTGA 5 cut(s) 232, 788, 1313, 2066, 3038
Hpy188I TCNGA 7 cut(s) 329, 1438, 1596, 1744, 1785, 2424, 3256
Hpy99I CGWCG 1 cut(s) 2487
HpyCH4III ACNGT 9 cut(s) 160, 1664, 1827, 2439, 2449, 2559, 2774, 2857, 2867
HpyCH4IV ACGT 5 cut(s) 990, 1021, 1568, 2200, 2997
HpyF10VI GCNNNNNNNGC 4 cut(s) 1980, 2918, 2991, 3177
HpySE526I ACGT 5 cut(s) 990, 1021, 1568, 2200, 2997
Hsp92I GRCGYC 1 cut(s) 1021
Kpn2I TCCGGA 1 cut(s) 2177
KroI GCCGGC 1 cut(s) 786
KroNI GCCGGC 1 cut(s) 788
Ksp22I TGATCA 3 cut(s) 103, 1035, 2056
KspAI GTTAAC 2 cut(s) 72, 2442
Kzo9I GATC 8 cut(s) 103, 112, 322, 724, 1035, 1363, 1864, 2056
LmnI GCTCC 1 cut(s) 2452
Lsp1109I GCAGC 2 cut(s) 1623, 2706
LweI GCATC 4 cut(s) 2360, 2617, 2825, 3154
MaeI CTAG 6 cut(s) 35, 744, 1724, 1862, 2694, 3152
MaeII ACGT 5 cut(s) 990, 1021, 1568, 2200, 2997
MaeIII GTNAC 6 cut(s) 42, 238, 545, 584, 2013, 3106
MalI GATC 8 cut(s) 105, 114, 324, 726, 1037, 1365, 1866, 2058
MboI GATC 8 cut(s) 103, 112, 322, 724, 1035, 1363, 1864, 2056
MfeI CAATTG 2 cut(s) 172, 805
MflI RGATCY 3 cut(s) 322, 1363, 1864
MhlI GDGCHC 3 cut(s) 2003, 2865, 3300
MlsI TGGCCA 2 cut(s) 2312, 2327
MluNI TGGCCA 2 cut(s) 2312, 2327
MlyI GAGTC 6 cut(s) 246, 1622, 2262, 2278, 2287, 2413
MmeI TCCRAC 6 cut(s) 117, 393, 455, 981, 2052, 2061
Mox20I TGGCCA 2 cut(s) 2312, 2327
MroI TCCGGA 1 cut(s) 2177
MroNI GCCGGC 1 cut(s) 786
MroXI GAANNNNTTC 2 cut(s) 1332, 1549
MscI TGGCCA 2 cut(s) 2312, 2327
MslI CAYNNNNRTG 1 cut(s) 2868
Msp20I TGGCCA 2 cut(s) 2312, 2327
MspA1I CMGCKG 1 cut(s) 2062
MspCI CTTAAG 1 cut(s) 2591
MspI CCGG 5 cut(s) 787, 1368, 1959, 2178, 2656
MspR9I CCNGG 7 cut(s) 1368, 1540, 1709, 2656, 2880, 3006, 3233
MunI CAATTG 2 cut(s) 172, 805
Mva1269I GAATGC 3 cut(s) 1002, 1924, 2639
MvaI CCWGG 5 cut(s) 1540, 1709, 2880, 3006, 3233
MwoI GCNNNNNNNGC 4 cut(s) 1980, 2918, 2991, 3177
NaeI GCCGGC 1 cut(s) 788
NciI CCSGG 2 cut(s) 1368, 2656
NdeI CATATG 1 cut(s) 28
NdeII GATC 8 cut(s) 103, 112, 322, 724, 1035, 1363, 1864, 2056
NgoMIV GCCGGC 1 cut(s) 786
NlaIV GGNNCC 7 cut(s) 350, 1456, 1517, 1706, 1841, 2187, 3297
NmuCI GTSAC 3 cut(s) 238, 2013, 3106
NspI RCATGY 5 cut(s) 293, 2691, 2731, 2803, 3202
PagI TCATGA 2 cut(s) 715, 1009
PasI CCCWGGG 1 cut(s) 1539
PciI ACATGT 4 cut(s) 289, 2687, 2727, 3198
PctI GAATGC 3 cut(s) 1002, 1924, 2639
PdiI GCCGGC 1 cut(s) 788
PdmI GAANNNNTTC 2 cut(s) 1332, 1549
PfeI GAWTC 6 cut(s) 1185, 1441, 1745, 2362, 2665, 3212
PflMI CCANNNNNTGG 1 cut(s) 293
PfoI TCCNGGA 2 cut(s) 1366, 3231
PkrI GCNGC 4 cut(s) 491, 626, 1638, 2721
PleI GAGTC 6 cut(s) 245, 1621, 2262, 2278, 2287, 2413
PpsI GAGTC 6 cut(s) 245, 1621, 2262, 2278, 2287, 2413
Ppu21I YACGTR 1 cut(s) 2998
PpuMI RGGWCCY 1 cut(s) 2185
PscI ACATGT 4 cut(s) 289, 2687, 2727, 3198
PshAI GACNNNNGTC 1 cut(s) 2928
PsiI TTATAA 1 cut(s) 1046
Psp124BI GAGCTC 1 cut(s) 2003
Psp1406I AACGTT 1 cut(s) 990
Psp5II RGGWCCY 1 cut(s) 2185
Psp6I CCWGG 5 cut(s) 1538, 1707, 2878, 3004, 3231
PspFI CCCAGC 1 cut(s) 1175
PspGI CCWGG 5 cut(s) 1538, 1707, 2878, 3004, 3231
PspN4I GGNNCC 7 cut(s) 350, 1456, 1517, 1706, 1841, 2187, 3297
PspPI GGNCC 7 cut(s) 177, 250, 1070, 1289, 1528, 2185, 2976
PspPPI RGGWCCY 1 cut(s) 2185
PstI CTGCAG 2 cut(s) 1165, 2724
PstNI CAGNNNCTG 1 cut(s) 2036
PsuI RGATCY 3 cut(s) 322, 1363, 1864
PvuII CAGCTG 1 cut(s) 2062
RsaI GTAC 9 cut(s) 24, 390, 811, 928, 1608, 1824, 2150, 2546, 2726
RsaNI GTAC 9 cut(s) 23, 389, 810, 927, 1607, 1823, 2149, 2545, 2725
RseI CAYNNNNRTG 1 cut(s) 2868
SacI GAGCTC 1 cut(s) 2003
SatI GCNGC 4 cut(s) 490, 625, 1637, 2720
Sau3AI GATC 8 cut(s) 103, 112, 322, 724, 1035, 1363, 1864, 2056
Sau96I GGNCC 7 cut(s) 177, 250, 1070, 1289, 1528, 2185, 2976
ScaI AGTACT 1 cut(s) 2150
SchI GAGTC 6 cut(s) 246, 1622, 2262, 2278, 2287, 2413
ScrFI CCNGG 7 cut(s) 1368, 1540, 1709, 2656, 2880, 3006, 3233
SduI GDGCHC 3 cut(s) 2003, 2865, 3300
SfaNI GCATC 4 cut(s) 2360, 2617, 2825, 3154
SfcI CTRYAG 2 cut(s) 1161, 2720
SinI GGWCC 6 cut(s) 177, 250, 1070, 1289, 2185, 2976
SmiMI CAYNNNNRTG 1 cut(s) 2868
SmlI CTYRAG 8 cut(s) 527, 1906, 2126, 2144, 2591, 2744, 3244, 3305
SmoI CTYRAG 8 cut(s) 527, 1906, 2126, 2144, 2591, 2744, 3244, 3305
SnaBI TACGTA 1 cut(s) 2998
SpeI ACTAGT 1 cut(s) 34
SsiI CCGC 4 cut(s) 243, 489, 624, 1068
SspI AATATT 1 cut(s) 1089
SspMI CTAG 6 cut(s) 35, 744, 1724, 1862, 2694, 3152
SstI GAGCTC 1 cut(s) 2003
StyD4I CCNGG 7 cut(s) 1366, 1538, 1707, 2654, 2878, 3004, 3231
StyI CCWWGG 3 cut(s) 246, 271, 904
TaaI ACNGT 9 cut(s) 160, 1664, 1827, 2439, 2449, 2559, 2774, 2857, 2867
TaiI ACGT 5 cut(s) 993, 1024, 1571, 2203, 3000
TaqI TCGA 3 cut(s) 1326, 1616, 2808
TatI WGTACW 4 cut(s) 809, 2148, 2544, 2724
TauI GCSGC 2 cut(s) 492, 627
TfiI GAWTC 6 cut(s) 1185, 1441, 1745, 2362, 2665, 3212
TscAI CASTG 6 cut(s) 106, 787, 1080, 2364, 2454, 2870
TseFI GTSAC 3 cut(s) 238, 2013, 3106
TseI GCWGC 2 cut(s) 1636, 2719
Tsp45I GTSAC 3 cut(s) 238, 2013, 3106
TspDTI ATGAA 7 cut(s) 375, 704, 1177, 1325, 1566, 2913, 3102
TspGWI ACGGA 2 cut(s) 1302, 2471
TspRI CASTG 6 cut(s) 106, 787, 1080, 2364, 2454, 2870
Van91I CCANNNNNTGG 1 cut(s) 293
Vha464I CTTAAG 1 cut(s) 2591
VneI GTGCAC 1 cut(s) 2861
VpaK11BI GGWCC 6 cut(s) 177, 250, 1070, 1289, 2185, 2976
XapI RAATTY 6 cut(s) 858, 1240, 1303, 1477, 2138, 2940
XbaI TCTAGA 1 cut(s) 3151
XceI RCATGY 5 cut(s) 293, 2691, 2731, 2803, 3202
XcmI CCANNNNNNNNNTGG 3 cut(s) 847, 2320, 2986
XmiI GTMKAC 1 cut(s) 687
XmnI GAANNNNTTC 2 cut(s) 1332, 1549
XspI CTAG 6 cut(s) 35, 744, 1724, 1862, 2694, 3152
ZraI GACGTC 1 cut(s) 1022
ZrmI AGTACT 1 cut(s) 2150
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.