Rw2G019060

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
24974599 .. 24980277
5679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G019060.1

Sequence Viewer

Length: 3162 bp
ATGGCAGCACAAACCAACCTTAACATCACCACAGACCAGTCTGCTCTTCTTGCTCTCAAAGCCCGTATCACCAATGACCCTAAAAACATAGTCTTCACTAACTGGTCAACCACAACCCCTGTTTGTAACTGGGTTGGAGTCACTTGTGAATTGGCTCGCCTGCGCCGGTTGAAGTTTATATGCCTGACACACAACAAGTTTATGGGAGTGATTCCGTCATGGTTTGGGTCCTTGTCCAAACTTCAAGAATTCAGTTTTTATGGTAATCAATTTTTTGGTTCCATCCCAGCTATAATATTCAACTTATCTGCTCTACAAATAATTGATCTGCGTTATAACCAACTCTCAGGTAGAATATCCAGAGAAATCGGGAACCTAACAATGTTGAAGGAGATCTACCTTGATAGTAATAATTTTGAAGAAATTCCAAATGAGATCGGCACTTTGAATCATCTGGAAAAATTGTTTGTGCAACATAATGCCTTGAAAGGGCCTATCCCTATGACTATCTTCAACATGTCATCTTTGACTATTGTAACTTTCTATGGCAACAATTTGAAGGGTAGAATTCCTGACAATATTTGTCAAAATCTTTCGAATATTCAAGAGTTGTATTTGGGTGAAAATCAGTTTAATGGTCCACTTCCATCCAAGTTATGGCAATGCAAACAACTTCTTACTTTAAGCTTGGGGGCTAACAACTTGACAGGTAGAATATCTAGAGAAATTGGGAACCTAACAATGTTGAAGGAGATCTACCTTAGTGGTAATAATTTTGAAGGTCCTATACCATATGAGATTGGTTATCTTCCAAATTTAGAGTGGTTGTTGCTCGATGAAAATAATCTAAATGGCCATATCCCATCCTCAATCTTCAATATCTCCACAATAACAGGATTAGGTCTCAGCTTCAATCAGCTTTCAGGTAGCCTCCCAGCAGACATTGGCCTTGCGCTTCCAAAACTAGAAGTGTTTGACGCAGGAGCGAATCACCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTGAGCTTCGGATTCTAGACCTGGGTGAGAACTCTTTTTCTGGATATTTTCCAACCACTCTGTGCCTCTTGACAAACCTTGAATGGCTCGGATTATTCGTCAATAATTTGACCATTGATACCTCTACTCCAGAAGTTAATATTTTGTCTTGTCTGCCAAATCTTAGAAATTTGAGGCATTTAGACTTTGGAAGCAATCCACTAAATGCGAAGCTTTCGATTTCCTTCAGTAATTTCTCTACATCACTTCGAAAACTTCATTTAGCAAACTGCAGCTTGAGAGGTGACATCTCCAGTGATATTGGGAATTTGAGTAGCTTGATACTTTTAAGCCTGGGAGACAATCAATTGAGCGGGCCAATTCCAAGCTCAATGGGAAGACTGCATAATCTTCAAGTTTTGTATATGTTTGATAACACATTGCAAGGATACATTCCAGATGAGCTTTGTCAACTAGAAAACTTATTTCAATTGGAGTTGGGTGGGAATCAACTCTCTGGTTCTGTACCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGAGGACTATCCTTAGGGTCCAATTTGTTGAATTCCACAATACCATCTACCTTGTGGGGACTTACAGATATCTTGGAACTAGACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGGTGCTGTTGGTAATTTGAAAGTTGCTACATACATAAATGTATCATACAACCAATTATCTGGGAGTGTACCAAGTAGCATTGGGAGTTTAGTGAGTTTGGTCTATCTCTCCTTAGCACATAATAATCTAGAAGGCCTTATTCCTAGTTCCTTTGCTACCTGTTTAAGCTTAGAACTGTTGGATTTATCTCTGAACAGTCTCTCTGGAGTGATTCCAAAGTCTCTTGAAGCACTCTCTTATCTCAAGTATCTGAATCTATCTTTCAACATACTCCAAGGAGAAATTCCAACCGGCGGTCCATTCAAAAACTTCTCTGCTGAATCATTTGTTTCAAACCATGGACTTTGTGGTGCATCCCATTTCCAAGTTCCACCATGCAAAACAAAAACTAGCATAGCTATCTTCAAGTATGTTATTCCGGGGATCTTGTCAGCAATGCTTCTAGCGACCTCCATGATTTGGTTGTTGATGTTGCGTAGAAAAAAGAATGTGAAAGCAGCAGCAAATTCTATCTTCACGCCTCAAGATTTCTGGAGAAGAGTTTCATACCAAGAGCTCCTAAGTGCGACTGATGGATTCAATGAAAGCAACTTACTTGGTACTGGGGGTTTTGGCTCAGTATATAAAGGAACATTGTCAGATGGGATGGACGTTGCGATAAAGATTTTCAATTTGGAGTTGGAAGACGCATTTTCAAGTTTTGAGGTTGAATGTGAAATGCTAAGTAATGTTCATCACCGAAATCTTGTCAAAGTCATCAGTTGTTGCAGTCAAGTGGATTTCAAAGGTCTTATATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAGAATTCTTCTTTGAACATAATGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTACCTTCATCATGGTTATGAAGTACCTATTGTCCATTGTGATTTGAAGCCAAGCAACATCCTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGTATTGCAAAACTTTTGGGTGGAGGAGATTCTATGACTCAAACCATGAACTTGGCCACAATTGGGTATATGGCTCCAGAGTATGGAATGCAAGGAATAGTGACCAGAAGAGGTGATGTGTATAGTTTTGGTATTGTAGTGATGGAAACATTCACAAGAAGGAAGCCAACTGATGAGATCTTCACTGGGGAAATGAGACTGAATCAATGGGTTGCAAATTTCCTAGTTGCAGATGCAATAGTTGAAGTTGTGGATGCTAGTTTACTTGGAAGCGAGGAGGCTCATGACTTCGTGAGCAAGAGGGAGTGCTTATCATCCATTATGAGATTAGCTGTTGCTTGTTCAGCAGAATCACCGGAAGAGAGGATAAACATGCAAGAGGCTGTAGCCATGCTTAAAACAATCAACATCAAGTTTTCAAAGGACTCTGCTGCAAGAGGTGTGGTGGTGAACCATCGTCCTGTTTCGTAA

Protein Analysis

1053

Amino Acids

115.51

Weight (kDa)

5.49

Isoelectric Point (pI)

32.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 11 - 49 1.4e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 101 - 206 1.4e-09 Leucine-rich repeat region
LRR_8 PF13855 321 - 380 4.3e-06 Leucine rich repeat
LRR_14 PF23598 416 - 551 4.5e-09 Leucine-rich repeat region
LRR_8 PF13855 594 - 651 3e-09 Leucine rich repeat
Pkinase PF00069 756 - 1027 4.1e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 759 - 1027 1.2e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 336
AccB7I CCANNNNNTGG 3 cut(s) 657, 2145, 2774
AccBSI CCGCTC 1 cut(s) 1383
AciI CCGC 2 cut(s) 1383, 1980
AclWI GGATC 1 cut(s) 2117
AcoI YGGCCR 2 cut(s) 853, 2745
AcuI CTGAAG 1 cut(s) 1240
AdeI CACNNNGTG 1 cut(s) 1092
AfaI GTAC 5 cut(s) 1536, 1755, 2287, 2594, 2616
AfiI CCNNNNNNNGG 7 cut(s) 489, 657, 1685, 1979, 2145, 2754, 2774
AflIII ACRYGT 2 cut(s) 516, 2677
AjnI CCWGG 2 cut(s) 1050, 1362
AjuI GAANNNNNNNTTGG 2 cut(s) 1953, 1985
AleI CACNNNNGTG 1 cut(s) 996
Alw21I GWGCWC 1 cut(s) 2244
Alw26I GTCTC 5 cut(s) 908, 1362, 1889, 1911, 2881
AlwI GGATC 1 cut(s) 2117
AlwNI CAGNNNCTG 1 cut(s) 1691
AoxI GGCC 6 cut(s) 491, 853, 946, 1385, 1819, 2745
ApeKI GCWGC 5 cut(s) 5, 1302, 2183, 2186, 3122
Asp700I GAANNNNTTC 2 cut(s) 423, 2227
AspLEI GCGC 2 cut(s) 165, 955
AspS9I GGNCC 8 cut(s) 228, 491, 638, 782, 1385, 1587, 1676, 1982
AsuC2I CCSGG 1 cut(s) 2106
AsuII TTCGAA 2 cut(s) 596, 1279
AvaII GGWCC 6 cut(s) 228, 638, 782, 1587, 1676, 1982
AxyI CCTNAGG 1 cut(s) 1582
BalI TGGCCA 2 cut(s) 855, 2747
BanII GRGCYC 1 cut(s) 2244
BarI GAAGNNNNNNTAC 6 cut(s) 380, 412, 740, 771, 772, 803
BbsI GAAGAC 3 cut(s) 85, 1414, 2376
Bbv12I GWGCWC 1 cut(s) 2244
BbvI GCAGC 5 cut(s) 17, 1314, 2195, 2198, 3109
BciT130I CCWGG 2 cut(s) 1052, 1364
BciVI GTATCC 1 cut(s) 1451
BcnI CCSGG 1 cut(s) 2106
BcoDI GTCTC 5 cut(s) 908, 1362, 1889, 1911, 2881
BfmI CTRYAG 2 cut(s) 1300, 3075
BfuI GTATCC 1 cut(s) 1451
BglII AGATCT 3 cut(s) 393, 753, 2868
BisI GCNGC 5 cut(s) 6, 1303, 2184, 2187, 3123
BlsI GCNGC 5 cut(s) 7, 1304, 2185, 2188, 3124
Bme1390I CCNGG 3 cut(s) 1052, 1364, 2106
Bme18I GGWCC 6 cut(s) 228, 638, 782, 1587, 1676, 1982
BmgT120I GGNCC 8 cut(s) 228, 491, 638, 782, 1385, 1587, 1676, 1982
BmiI GGNNCC 7 cut(s) 229, 280, 374, 734, 1588, 2504, 2766
BmrFI CCNGG 3 cut(s) 1052, 1364, 2106
BmrI ACTGGG 3 cut(s) 139, 2298, 2886
BmsI GCATC 5 cut(s) 1571, 2048, 2588, 2914, 2935
BmuI ACTGGG 3 cut(s) 139, 2298, 2886
BpiI GAAGAC 3 cut(s) 85, 1414, 2376
BpmI CTGGAG 5 cut(s) 1143, 1306, 1911, 2239, 2751
Bpu10I CCTNAGC 1 cut(s) 1798
Bpu14I TTCGAA 2 cut(s) 596, 1279
BpuEI CTTGAG 4 cut(s) 1327, 1913, 2193, 2528
BpuMI CCSGG 1 cut(s) 2106
BsaI GGTCTC 1 cut(s) 908
BsaJI CCNNGG 5 cut(s) 1051, 1363, 1960, 2023, 2105
BsaWI WCCGGW 1 cut(s) 3046
BsaXI ACNNNNNCTCC 2 cut(s) 1141, 1171
Bsc4I CCNNNNNNNGG 7 cut(s) 489, 657, 1685, 1979, 2145, 2754, 2774
Bse118I RCCGGY 2 cut(s) 165, 1976
Bse1I ACTGG 6 cut(s) 37, 107, 134, 1323, 2293, 2881
Bse21I CCTNAGG 1 cut(s) 1582
Bse3DI GCAATG 3 cut(s) 668, 1448, 2127
BseBI CCWGG 2 cut(s) 1052, 1364
BseDI CCNNGG 5 cut(s) 1051, 1363, 1960, 2023, 2105
BseGI GGATG 9 cut(s) 282, 647, 863, 1658, 2039, 2337, 2649, 2950, 3005
BseLI CCNNNNNNNGG 7 cut(s) 489, 657, 1685, 1979, 2145, 2754, 2774
BseMI GCAATG 3 cut(s) 668, 1448, 2127
BseMII CTCAG 6 cut(s) 360, 919, 1009, 1023, 2316, 2540
BseNI ACTGG 6 cut(s) 37, 107, 134, 1323, 2293, 2881
BseRI GAGGAG 2 cut(s) 2730, 2981
BseXI GCAGC 5 cut(s) 17, 1314, 2195, 2198, 3109
BseYI CCCAGC 2 cut(s) 286, 934
BshFI GGCC 6 cut(s) 493, 855, 948, 1387, 1821, 2747
BsiHKAI GWGCWC 1 cut(s) 2244
BsiSI CCGG 4 cut(s) 166, 1977, 2105, 3047
BslFI GGGAC 1 cut(s) 1641
BslI CCNNNNNNNGG 7 cut(s) 489, 657, 1685, 1979, 2145, 2754, 2774
BsmAI GTCTC 5 cut(s) 908, 1362, 1889, 1911, 2881
BsmFI GGGAC 1 cut(s) 1641
BsmI GAATGC 1 cut(s) 2784
BsnI GGCC 6 cut(s) 493, 855, 948, 1387, 1821, 2747
Bso31I GGTCTC 1 cut(s) 908
Bsp119I TTCGAA 2 cut(s) 596, 1279
Bsp1286I GDGCHC 1 cut(s) 2244
Bsp143I GATC 6 cut(s) 325, 393, 435, 753, 2109, 2868
Bsp19I CCATGG 1 cut(s) 2023
BspACI CCGC 2 cut(s) 1383, 1980
BspANI GGCC 6 cut(s) 493, 855, 948, 1387, 1821, 2747
BspCNI CTCAG 6 cut(s) 359, 918, 1008, 1024, 2315, 2539
BspHI TCATGA 1 cut(s) 2974
BspLI GGNNCC 7 cut(s) 229, 280, 374, 734, 1588, 2504, 2766
BspMAI CTGCAG 1 cut(s) 1304
BspPI GGATC 1 cut(s) 2117
BspQI GCTCTTC 1 cut(s) 51
BspT104I TTCGAA 2 cut(s) 596, 1279
BspTNI GGTCTC 1 cut(s) 908
BsrBI CCGCTC 1 cut(s) 1383
BsrDI GCAATG 3 cut(s) 668, 1448, 2127
BsrFI RCCGGY 2 cut(s) 165, 1976
BsrI ACTGG 6 cut(s) 37, 107, 134, 1323, 2293, 2881
BssAI RCCGGY 2 cut(s) 165, 1976
BssECI CCNNGG 5 cut(s) 1051, 1363, 1960, 2023, 2105
BssMI GATC 6 cut(s) 325, 393, 435, 753, 2109, 2868
BssT1I CCWWGG 2 cut(s) 1960, 2023
Bst2UI CCWGG 2 cut(s) 1052, 1364
Bst4CI ACNGT 2 cut(s) 1863, 1883
Bst6I CTCTTC 4 cut(s) 51, 2218, 2794, 3045
BstAPI GCANNNNNTGC 1 cut(s) 2681
BstBI TTCGAA 2 cut(s) 596, 1279
BstC8I GCNNGC 3 cut(s) 157, 161, 1385
BstDSI CCRYGG 1 cut(s) 2023
BstENI CCTNNNNNAGG 1 cut(s) 1683
BstF5I GGATG 9 cut(s) 282, 647, 863, 1658, 2039, 2337, 2649, 2950, 3005
BstHHI GCGC 2 cut(s) 165, 955
BstKTI GATC 6 cut(s) 328, 396, 438, 756, 2112, 2871
BstMAI GTCTC 5 cut(s) 908, 1362, 1889, 1911, 2881
BstMBI GATC 6 cut(s) 325, 393, 435, 753, 2109, 2868
BstMWI GCNNNNNNNGC 4 cut(s) 50, 59, 2681, 3035
BstNI CCWGG 2 cut(s) 1052, 1364
BstNSI RCATGY 4 cut(s) 520, 2494, 2681, 3067
BstSCI CCNGG 3 cut(s) 1050, 1362, 2104
BstSFI CTRYAG 2 cut(s) 1300, 3075
BstV1I GCAGC 5 cut(s) 17, 1314, 2195, 2198, 3109
BstV2I GAAGAC 3 cut(s) 85, 1414, 2376
BstX2I RGATCY 4 cut(s) 393, 753, 2109, 2868
BstXI CCANNNNNNTGG 2 cut(s) 1745, 2743
BstYI RGATCY 4 cut(s) 393, 753, 2109, 2868
Bsu36I CCTNAGG 1 cut(s) 1582
BsuI GTATCC 1 cut(s) 1451
BsuRI GGCC 6 cut(s) 493, 855, 948, 1387, 1821, 2747
BtgI CCRYGG 1 cut(s) 2023
BtsCI GGATG 9 cut(s) 282, 647, 863, 1658, 2039, 2337, 2649, 2950, 3005
BtsIMutI CAGTG 3 cut(s) 1003, 1330, 2874
Cac8I GCNNGC 3 cut(s) 157, 161, 1385
CaiI CAGNNNCTG 1 cut(s) 1691
CciI TCATGA 1 cut(s) 2974
CfoI GCGC 2 cut(s) 165, 955
Cfr10I RCCGGY 2 cut(s) 165, 1976
Cfr13I GGNCC 8 cut(s) 228, 491, 638, 782, 1385, 1587, 1676, 1982
CseI GACGC 2 cut(s) 986, 2381
Csp6I GTAC 5 cut(s) 1535, 1754, 2286, 2593, 2615
CspCI CAANNNNNGTGG 2 cut(s) 3114, 3149
CviQI GTAC 5 cut(s) 1535, 1754, 2286, 2593, 2615
DpnI GATC 6 cut(s) 327, 395, 437, 755, 2111, 2870
DpnII GATC 6 cut(s) 325, 393, 435, 753, 2109, 2868
DraIII CACNNNGTG 1 cut(s) 1092
EaeI YGGCCR 2 cut(s) 853, 2745
Eam1104I CTCTTC 4 cut(s) 51, 2218, 2794, 3045
EarI CTCTTC 4 cut(s) 51, 2218, 2794, 3045
Ecl136II GAGCTC 1 cut(s) 2242
Eco130I CCWWGG 2 cut(s) 1960, 2023
Eco147I AGGCCT 1 cut(s) 1821
Eco24I GRGCYC 1 cut(s) 2244
Eco31I GGTCTC 1 cut(s) 908
Eco32I GATATC 1 cut(s) 1639
Eco47I GGWCC 6 cut(s) 228, 638, 782, 1587, 1676, 1982
Eco53kI GAGCTC 1 cut(s) 2242
Eco57I CTGAAG 1 cut(s) 1240
Eco81I CCTNAGG 1 cut(s) 1582
EcoICRI GAGCTC 1 cut(s) 2242
EcoNI CCTNNNNNAGG 1 cut(s) 1683
EcoO109I RGGNCCY 3 cut(s) 228, 491, 782
EcoRI GAATTC 4 cut(s) 248, 567, 1600, 2530
EcoRII CCWGG 2 cut(s) 1050, 1362
EcoRV GATATC 1 cut(s) 1639
EcoT14I CCWWGG 2 cut(s) 1960, 2023
EcoT38I GRGCYC 1 cut(s) 2244
ErhI CCWWGG 2 cut(s) 1960, 2023
FaqI GGGAC 1 cut(s) 1641
FauI CCCGC 1 cut(s) 1376
FauNDI CATATG 1 cut(s) 793
Fnu4HI GCNGC 5 cut(s) 6, 1303, 2184, 2187, 3123
FokI GGATG 9 cut(s) 269, 634, 850, 1645, 2026, 2344, 2636, 2957, 2992
FriOI GRGCYC 1 cut(s) 2244
Fsp4HI GCNGC 5 cut(s) 6, 1303, 2184, 2187, 3123
GlaI GCGC 2 cut(s) 164, 954
GluI GCNGC 5 cut(s) 6, 1303, 2184, 2187, 3123
GsaI CCCAGC 2 cut(s) 290, 938
GsuI CTGGAG 5 cut(s) 1143, 1306, 1911, 2239, 2751
HaeIII GGCC 6 cut(s) 493, 855, 948, 1387, 1821, 2747
HapII CCGG 4 cut(s) 166, 1977, 2105, 3047
HgaI GACGC 2 cut(s) 986, 2381
HhaI GCGC 2 cut(s) 165, 955
Hin6I GCGC 2 cut(s) 163, 953
HinP1I GCGC 2 cut(s) 163, 953
HincII GTYRAC 2 cut(s) 108, 1481
HindII GTYRAC 2 cut(s) 108, 1481
HindIII AAGCTT 3 cut(s) 685, 1241, 1852
HpaII CCGG 4 cut(s) 166, 1977, 2105, 3047
Hpy166II GTNNAC 6 cut(s) 108, 641, 1481, 1754, 2954, 3142
Hpy188I TCNGA 7 cut(s) 1033, 1041, 1121, 1878, 1938, 2326, 2529
Hpy8I GTNNAC 6 cut(s) 108, 641, 1481, 1754, 2954, 3142
HpyAV CCTTC 9 cut(s) 382, 553, 742, 773, 1264, 1548, 1811, 2606, 2844
HpyCH4III ACNGT 2 cut(s) 1863, 1883
HpyCH4IV ACGT 1 cut(s) 2337
HpyF10VI GCNNNNNNNGC 4 cut(s) 50, 59, 2681, 3035
HpySE526I ACGT 1 cut(s) 2337
HspAI GCGC 2 cut(s) 163, 953
Kzo9I GATC 6 cut(s) 325, 393, 435, 753, 2109, 2868
LguI GCTCTTC 1 cut(s) 51
LmnI GCTCC 4 cut(s) 983, 2247, 2502, 2770
Lsp1109I GCAGC 5 cut(s) 17, 1314, 2195, 2198, 3109
LweI GCATC 5 cut(s) 1571, 2048, 2588, 2914, 2935
MaeII ACGT 1 cut(s) 2337
MaeIII GTNAC 5 cut(s) 125, 139, 535, 1313, 2791
MalI GATC 6 cut(s) 327, 395, 437, 755, 2111, 2870
MbiI CCGCTC 1 cut(s) 1383
MboI GATC 6 cut(s) 325, 393, 435, 753, 2109, 2868
MfeI CAATTG 3 cut(s) 1376, 1499, 2751
MflI RGATCY 4 cut(s) 393, 753, 2109, 2868
MhlI GDGCHC 1 cut(s) 2244
MlsI TGGCCA 2 cut(s) 855, 2747
MluNI TGGCCA 2 cut(s) 855, 2747
MlyI GAGTC 3 cut(s) 147, 2722, 3110
MmeI TCCRAC 6 cut(s) 115, 1106, 1845, 1997, 2346, 2538
Mox20I TGGCCA 2 cut(s) 855, 2747
MroXI GAANNNNTTC 2 cut(s) 423, 2227
MscI TGGCCA 2 cut(s) 855, 2747
MseI TTAA 7 cut(s) 21, 633, 683, 1167, 1358, 1850, 3087
MslI CAYNNNNRTG 2 cut(s) 996, 2607
Msp20I TGGCCA 2 cut(s) 855, 2747
MspI CCGG 4 cut(s) 166, 1977, 2105, 3047
MspR9I CCNGG 3 cut(s) 1052, 1364, 2106
MunI CAATTG 3 cut(s) 1376, 1499, 2751
Mva1269I GAATGC 1 cut(s) 2784
MvaI CCWGG 2 cut(s) 1052, 1364
MwoI GCNNNNNNNGC 4 cut(s) 50, 59, 2681, 3035
NciI CCSGG 1 cut(s) 2106
NcoI CCATGG 1 cut(s) 2023
NdeI CATATG 1 cut(s) 793
NdeII GATC 6 cut(s) 325, 393, 435, 753, 2109, 2868
NlaIV GGNNCC 7 cut(s) 229, 280, 374, 734, 1588, 2504, 2766
NmuCI GTSAC 3 cut(s) 139, 1313, 2791
NspI RCATGY 4 cut(s) 520, 2494, 2681, 3067
NspV TTCGAA 2 cut(s) 596, 1279
OliI CACNNNNGTG 1 cut(s) 996
PagI TCATGA 1 cut(s) 2974
PceI AGGCCT 1 cut(s) 1821
PciI ACATGT 2 cut(s) 516, 2677
PciSI GCTCTTC 1 cut(s) 51
PcsI WCGNNNNNNNCGW 1 cut(s) 1125
PctI GAATGC 1 cut(s) 2784
PdmI GAANNNNTTC 2 cut(s) 423, 2227
PflMI CCANNNNNTGG 3 cut(s) 657, 2145, 2774
PkrI GCNGC 5 cut(s) 7, 1304, 2185, 2188, 3124
PleI GAGTC 3 cut(s) 146, 2722, 3110
PpsI GAGTC 3 cut(s) 146, 2722, 3110
PpuMI RGGWCCY 2 cut(s) 228, 782
PscI ACATGT 2 cut(s) 516, 2677
PsiI TTATAA 1 cut(s) 336
Psp124BI GAGCTC 1 cut(s) 2244
Psp5II RGGWCCY 2 cut(s) 228, 782
Psp6I CCWGG 2 cut(s) 1050, 1362
PspFI CCCAGC 2 cut(s) 286, 934
PspGI CCWGG 2 cut(s) 1050, 1362
PspN4I GGNNCC 7 cut(s) 229, 280, 374, 734, 1588, 2504, 2766
PspPI GGNCC 8 cut(s) 228, 491, 638, 782, 1385, 1587, 1676, 1982
PspPPI RGGWCCY 2 cut(s) 228, 782
PstI CTGCAG 1 cut(s) 1304
PstNI CAGNNNCTG 1 cut(s) 1691
PsuI RGATCY 4 cut(s) 393, 753, 2109, 2868
RsaI GTAC 5 cut(s) 1536, 1755, 2287, 2594, 2616
RsaNI GTAC 5 cut(s) 1535, 1754, 2286, 2593, 2615
RseI CAYNNNNRTG 2 cut(s) 996, 2607
SacI GAGCTC 1 cut(s) 2244
SapI GCTCTTC 1 cut(s) 51
SaqAI TTAA 7 cut(s) 21, 633, 683, 1167, 1358, 1850, 3087
SatI GCNGC 5 cut(s) 6, 1303, 2184, 2187, 3123
Sau3AI GATC 6 cut(s) 325, 393, 435, 753, 2109, 2868
Sau96I GGNCC 8 cut(s) 228, 491, 638, 782, 1385, 1587, 1676, 1982
SchI GAGTC 3 cut(s) 147, 2722, 3110
ScrFI CCNGG 3 cut(s) 1052, 1364, 2106
SduI GDGCHC 1 cut(s) 2244
SfaNI GCATC 5 cut(s) 1571, 2048, 2588, 2914, 2935
SfcI CTRYAG 2 cut(s) 1300, 3075
SfuI TTCGAA 2 cut(s) 596, 1279
SinI GGWCC 6 cut(s) 228, 638, 782, 1587, 1676, 1982
SmiMI CAYNNNNRTG 2 cut(s) 996, 2607
SmlI CTYRAG 4 cut(s) 1306, 1928, 2208, 2507
SmoI CTYRAG 4 cut(s) 1306, 1928, 2208, 2507
SseBI AGGCCT 1 cut(s) 1821
SsiI CCGC 2 cut(s) 1383, 1980
SspI AATATT 4 cut(s) 297, 580, 601, 1171
SstI GAGCTC 1 cut(s) 2244
StuI AGGCCT 1 cut(s) 1821
StyD4I CCNGG 3 cut(s) 1050, 1362, 2104
StyI CCWWGG 2 cut(s) 1960, 2023
TaaI ACNGT 2 cut(s) 1863, 1883
TaiI ACGT 1 cut(s) 2340
TaqI TCGA 4 cut(s) 596, 834, 1247, 1279
Tru1I TTAA 7 cut(s) 21, 633, 683, 1167, 1358, 1850, 3087
Tru9I TTAA 7 cut(s) 21, 633, 683, 1167, 1358, 1850, 3087
TscAI CASTG 3 cut(s) 1003, 1330, 2881
TseFI GTSAC 3 cut(s) 139, 1313, 2791
TseI GCWGC 5 cut(s) 5, 1302, 2183, 2186, 3122
Tsp45I GTSAC 3 cut(s) 139, 1313, 2791
TspDTI ATGAA 8 cut(s) 852, 1277, 2220, 2283, 2408, 2588, 2625, 2753
TspGWI ACGGA 1 cut(s) 204
TspRI CASTG 3 cut(s) 1003, 1330, 2881
Van91I CCANNNNNTGG 3 cut(s) 657, 2145, 2774
VpaK11BI GGWCC 6 cut(s) 228, 638, 782, 1587, 1676, 1982
XagI CCTNNNNNAGG 1 cut(s) 1683
XbaI TCTAGA 3 cut(s) 719, 1045, 1813
XceI RCATGY 4 cut(s) 520, 2494, 2681, 3067
XcmI CCANNNNNNNNNTGG 4 cut(s) 654, 819, 1620, 2030
XmnI GAANNNNTTC 2 cut(s) 423, 2227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.