MD02G1291800.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
34792271 .. 34797055
4785 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1291800.v1.1.491

Sequence Viewer

Length: 1698 bp
ATGAATAAACTCAGTGGAGTAATTCCCATCTTTATCTCTAATGCTTCAAAGCTCACTCATGTAGACATGAGTGAAAACTCTTTTTCCGGGTTTATTCTTAACAAGCTATGTGCCTTAACAAACCTTGAGTATCTTAGCCTATACAAAAATAATTTGACAATTCACACTTCAACTCCAGAAGTAAACATCCTTTGCTGTTTCGCTAGTCTTAGAAATCTTAGGGTATTGATCCAGGGACGTAATCCGCTAAACGCTCATCTTCCTGTTTCTTTTCGGAATCTCTCTACATCGTTTCAATTGCTTACTTTAGACCATTGCAAATTGAAGGGTAGCATTCCCATTGAAATTGGCAACTTTAGCAGCGTGATATCCATAAAGCTGGCATCCAATCAATTGAGTGGGTTAATTCCAACTTCTTTGGGAAGACTAGGGAGTCTCCAAGGTTTGTATTTGTTTGATAACAAATTGCAAGGATATATCCCCAATGAACTTTGTCAACTAACCAAACTAGCTGATTTATATTTAAGTGAGAATCAACTTTCTGGTTTTGTAGAATTTTTCAGGTCGACGGGCCAAGGACTCACTCCAACAACATCGATATTGTCCCCATTTAACCACCTGCACAATCCTCAGGAGCCTTGGTGTTATTTCATCATAAAGTACCTGAATTTGTCTTTCAACGAACTCCAAGGGGAAATTCCAGAAGGTGGTCCGTTCAGAAACTTATCTGCTCTATCATTTGTCTCGAATAAGGCGCTGTGTGGGGCAGCTCGACTCCATGTCCCTCCATGCAAAGACAGTACACTTCAACCAAATTCAAGGAAAGCTAGATCATCCAATTTGAAATATATTATTCCAGGAATAATCGTAACAGGAATCTTCTTTGTAGCCTTTCTAGAAGGGGCTTTCAAGAGCTTTGAGAGGGAATGTGAAATGCCAAGCAATATTCGGCACCGAAATCTTATTAAAATCATCAGCTGTTGCAGCCAATTGGATTTCAAAGCCTTGGTGCTGAACTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAAAACTCTTCTTTTGATATCCTAAAGAGGTTGAATATAATGGTAGATGTTGCATTGGCATTGGAATACCTACACCATGGTTATTCAGTACCAATTGTTCATTGTGATTTGAAGCCAAGAAATATACTTCTAGATGATGATATGGTTGCACATGTTGCGGATTTTGGCATTGCAAAAATCTTGGGTTTAGGGGATCCCATGACCCAAACCATGACCCTAGCCATAGTTGGTTATATGGCTCCAGAGTATGGAATGGATGGAATTGTTTTGACGCAAGGGGATGTGTACAGTTTTGGTATTGTAGTCATGGAAACATTCACAAAAATGAAGCCTACAAATGAGATGTTTGTTGAGGAAATGAATCTAAAGCAATGGGTTGCAAATTCACTATCATCAGAAGCAATGGCTGAAGTTGTGGATGCCAATCTACTGGTAGCACAAGAGCAAGATCACGAGTGTTTGACTAAGATAGATTGCTTATCGTCCGTTTTGCGATTAGCTCTTGTTTGGTCTGCAGAACCACCACACGAGAGGATAAGCATACGAGAAGTTGTAGCGACGCTCAAAAAAATCAAAATCAAGTTTTTGAAGGACGCTGCAAGAAGTGTGCAGTTAAACCGTCGTCCTGTTCAAGCACTTTGA

Protein Analysis

566

Amino Acids

63.04

Weight (kDa)

7.87

Isoelectric Point (pI)

37.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 124 - 180 1.4e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 304 - 472 3.4e-32 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 304 - 537 5.5e-30 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 627
AasI GACNNNNNNGTC 1 cut(s) 432
Acc36I ACCTGC 1 cut(s) 627
AccB1I GGYRCC 1 cut(s) 951
AccB7I CCANNNNNTGG 2 cut(s) 707, 1304
AccI GTMKAC 2 cut(s) 63, 566
AciI CCGC 2 cut(s) 245, 1214
AclWI GGATC 3 cut(s) 223, 1244, 1257
AcsI RAATTY 5 cut(s) 554, 667, 696, 814, 1438
AcuI CTGAAG 1 cut(s) 1485
AfaI GTAC 4 cut(s) 662, 802, 1146, 1343
AfiI CCNNNNNNNGG 2 cut(s) 707, 1304
AflIII ACRYGT 1 cut(s) 1207
AhdI GACNNNNNGTC 1 cut(s) 779
AjnI CCWGG 2 cut(s) 231, 856
AjuI GAANNNNNNNTTGG 2 cut(s) 681, 713
AluBI AGCT 9 cut(s) 52, 106, 379, 512, 770, 827, 915, 978, 1556
AluI AGCT 9 cut(s) 52, 106, 379, 512, 770, 827, 915, 978, 1556
Alw26I GTCTC 2 cut(s) 440, 748
AlwI GGATC 3 cut(s) 223, 1244, 1257
AoxI GGCC 1 cut(s) 571
ApeKI GCWGC 4 cut(s) 360, 767, 984, 1652
ApoI RAATTY 5 cut(s) 554, 667, 696, 814, 1438
AspLEI GCGC 1 cut(s) 757
AspS9I GGNCC 2 cut(s) 571, 710
AsuC2I CCSGG 1 cut(s) 88
AvaII GGWCC 1 cut(s) 710
AxyI CCTNAGG 1 cut(s) 630
BamHI GGATCC 1 cut(s) 1249
BanI GGYRCC 1 cut(s) 951
BauI CACGAG 2 cut(s) 1508, 1583
BbsI GAAGAC 1 cut(s) 430
BbvI GCAGC 4 cut(s) 372, 779, 996, 1639
BccI CCATC 2 cut(s) 35, 1307
BciT130I CCWGG 2 cut(s) 233, 858
BcnI CCSGG 1 cut(s) 88
BcoDI GTCTC 2 cut(s) 440, 748
BfaI CTAG 7 cut(s) 204, 428, 509, 828, 896, 1187, 1274
BfmI CTRYAG 1 cut(s) 1569
BfoI RGCGCY 1 cut(s) 758
BfuAI ACCTGC 1 cut(s) 627
BisI GCNGC 4 cut(s) 361, 768, 985, 1653
BlsI GCNGC 4 cut(s) 362, 769, 986, 1654
Bme1390I CCNGG 3 cut(s) 88, 233, 858
Bme18I GGWCC 1 cut(s) 710
BmeRI GACNNNNNGTC 1 cut(s) 779
BmgT120I GGNCC 2 cut(s) 571, 710
BmiI GGNNCC 5 cut(s) 636, 953, 1034, 1251, 1296
BmrFI CCNGG 3 cut(s) 88, 233, 858
BmsI GCATC 2 cut(s) 392, 1465
BpiI GAAGAC 1 cut(s) 430
BpmI CTGGAG 2 cut(s) 159, 1281
BpuEI CTTGAG 2 cut(s) 146, 1058
BpuMI CCSGG 1 cut(s) 88
Bsa29I ATCGAT 1 cut(s) 596
BsaBI GATNNNNATC 1 cut(s) 1479
BsaJI CCNNGG 7 cut(s) 232, 439, 574, 638, 688, 1005, 1132
BsaXI ACNNNNNCTCC 4 cut(s) 157, 187, 626, 656
Bsc4I CCNNNNNNNGG 2 cut(s) 707, 1304
Bse1I ACTGG 1 cut(s) 1491
Bse21I CCTNAGG 1 cut(s) 630
Bse3DI GCAATG 4 cut(s) 313, 1224, 1433, 1464
Bse8I GATNNNNATC 1 cut(s) 1479
BseBI CCWGG 2 cut(s) 233, 858
BseCI ATCGAT 1 cut(s) 596
BseDI CCNNGG 7 cut(s) 232, 439, 574, 638, 688, 1005, 1132
BseGI GGATG 6 cut(s) 186, 383, 833, 1318, 1342, 1480
BseJI GATNNNNATC 1 cut(s) 1479
BseLI CCNNNNNNNGG 2 cut(s) 707, 1304
BseMI GCAATG 4 cut(s) 313, 1224, 1433, 1464
BseMII CTCAG 2 cut(s) 25, 644
BseNI ACTGG 1 cut(s) 1491
BseXI GCAGC 4 cut(s) 372, 779, 996, 1639
BsgI GTGCAG 2 cut(s) 605, 1685
BshFI GGCC 1 cut(s) 573
BshNI GGYRCC 1 cut(s) 951
BshVI ATCGAT 1 cut(s) 596
BsiSI CCGG 1 cut(s) 87
BslFI GGGAC 3 cut(s) 249, 589, 767
BslI CCNNNNNNNGG 2 cut(s) 707, 1304
BsmAI GTCTC 2 cut(s) 440, 748
BsmFI GGGAC 3 cut(s) 249, 589, 767
BsmI GAATGC 1 cut(s) 333
BsnI GGCC 1 cut(s) 573
Bsp1407I TGTACA 1 cut(s) 1341
Bsp143I GATC 4 cut(s) 228, 830, 1249, 1504
Bsp19I CCATGG 1 cut(s) 1132
BspACI CCGC 2 cut(s) 245, 1214
BspANI GGCC 1 cut(s) 573
BspCNI CTCAG 2 cut(s) 24, 643
BspDI ATCGAT 1 cut(s) 596
BspLI GGNNCC 5 cut(s) 636, 953, 1034, 1251, 1296
BspMAI CTGCAG 1 cut(s) 1573
BspMI ACCTGC 1 cut(s) 627
BspPI GGATC 3 cut(s) 223, 1244, 1257
BspT107I GGYRCC 1 cut(s) 951
BsrDI GCAATG 4 cut(s) 313, 1224, 1433, 1464
BsrGI TGTACA 1 cut(s) 1341
BsrI ACTGG 1 cut(s) 1491
BssECI CCNNGG 7 cut(s) 232, 439, 574, 638, 688, 1005, 1132
BssMI GATC 4 cut(s) 228, 830, 1249, 1504
BssSI CACGAG 2 cut(s) 1508, 1583
BssT1I CCWWGG 6 cut(s) 439, 574, 638, 688, 1005, 1132
Bst2BI CACGAG 2 cut(s) 1508, 1583
Bst2UI CCWGG 2 cut(s) 233, 858
Bst4CI ACNGT 3 cut(s) 800, 1346, 1676
Bst6I CTCTTC 1 cut(s) 1069
BstAPI GCANNNNNTGC 1 cut(s) 1211
BstAUI TGTACA 1 cut(s) 1341
BstC8I GCNNGC 1 cut(s) 381
BstDEI CTNAG 6 cut(s) 11, 134, 209, 218, 630, 1521
BstDSI CCRYGG 1 cut(s) 1132
BstF5I GGATG 6 cut(s) 186, 383, 833, 1318, 1342, 1480
BstH2I RGCGCY 1 cut(s) 758
BstHHI GCGC 1 cut(s) 757
BstKTI GATC 4 cut(s) 231, 833, 1252, 1507
BstMAI GTCTC 2 cut(s) 440, 748
BstMBI GATC 4 cut(s) 228, 830, 1249, 1504
BstMWI GCNNNNNNNGC 3 cut(s) 357, 984, 1211
BstNI CCWGG 2 cut(s) 233, 858
BstNSI RCATGY 2 cut(s) 1024, 1211
BstSCI CCNGG 3 cut(s) 86, 231, 856
BstSFI CTRYAG 1 cut(s) 1569
BstV1I GCAGC 4 cut(s) 372, 779, 996, 1639
BstV2I GAAGAC 1 cut(s) 430
BstX2I RGATCY 1 cut(s) 1249
BstXI CCANNNNNNTGG 2 cut(s) 379, 1486
BstYI RGATCY 1 cut(s) 1249
Bsu15I ATCGAT 1 cut(s) 596
Bsu36I CCTNAGG 1 cut(s) 630
BsuRI GGCC 1 cut(s) 573
BsuTUI ATCGAT 1 cut(s) 596
BtgI CCRYGG 1 cut(s) 1132
BtsCI GGATG 6 cut(s) 186, 383, 833, 1318, 1342, 1480
BtsIMutI CAGTG 1 cut(s) 19
BveI ACCTGC 1 cut(s) 627
Cac8I GCNNGC 1 cut(s) 381
CfoI GCGC 1 cut(s) 757
Cfr13I GGNCC 2 cut(s) 571, 710
ClaI ATCGAT 1 cut(s) 596
CseI GACGC 3 cut(s) 1336, 1624, 1658
Csp6I GTAC 4 cut(s) 661, 801, 1145, 1342
CviQI GTAC 4 cut(s) 661, 801, 1145, 1342
DdeI CTNAG 6 cut(s) 11, 134, 209, 218, 630, 1521
DpnI GATC 4 cut(s) 230, 832, 1251, 1506
DpnII GATC 4 cut(s) 228, 830, 1249, 1504
DrdI GACNNNNNNGTC 1 cut(s) 432
DriI GACNNNNNGTC 1 cut(s) 779
DseDI GACNNNNNNGTC 1 cut(s) 432
Eam1104I CTCTTC 1 cut(s) 1069
Eam1105I GACNNNNNGTC 1 cut(s) 779
EarI CTCTTC 1 cut(s) 1069
Eco130I CCWWGG 6 cut(s) 439, 574, 638, 688, 1005, 1132
Eco32I GATATC 2 cut(s) 369, 1075
Eco47I GGWCC 1 cut(s) 710
Eco57I CTGAAG 1 cut(s) 1485
Eco81I CCTNAGG 1 cut(s) 630
EcoRII CCWGG 2 cut(s) 231, 856
EcoRV GATATC 2 cut(s) 369, 1075
EcoT14I CCWWGG 6 cut(s) 439, 574, 638, 688, 1005, 1132
ErhI CCWWGG 6 cut(s) 439, 574, 638, 688, 1005, 1132
FaqI GGGAC 3 cut(s) 249, 589, 767
FblI GTMKAC 2 cut(s) 63, 566
Fnu4HI GCNGC 4 cut(s) 361, 768, 985, 1653
FokI GGATG 6 cut(s) 173, 370, 820, 1325, 1349, 1487
Fsp4HI GCNGC 4 cut(s) 361, 768, 985, 1653
FspBI CTAG 7 cut(s) 204, 428, 509, 828, 896, 1187, 1274
GlaI GCGC 1 cut(s) 756
GluI GCNGC 4 cut(s) 361, 768, 985, 1653
GsuI CTGGAG 2 cut(s) 159, 1281
HaeII RGCGCY 1 cut(s) 758
HaeIII GGCC 1 cut(s) 573
HapII CCGG 1 cut(s) 87
HgaI GACGC 3 cut(s) 1336, 1624, 1658
HhaI GCGC 1 cut(s) 757
Hin6I GCGC 1 cut(s) 755
HinP1I GCGC 1 cut(s) 755
HincII GTYRAC 2 cut(s) 497, 567
HindII GTYRAC 2 cut(s) 497, 567
HinfI GANTC 7 cut(s) 277, 433, 532, 579, 774, 876, 1417
HpaII CCGG 1 cut(s) 87
Hpy166II GTNNAC 6 cut(s) 64, 184, 497, 567, 803, 1342
Hpy188I TCNGA 3 cut(s) 276, 719, 1453
Hpy188III TCNNGA 9 cut(s) 176, 632, 701, 745, 896, 910, 1187, 1298, 1508
Hpy8I GTNNAC 6 cut(s) 64, 184, 497, 567, 803, 1342
Hpy99I CGWCG 3 cut(s) 571, 1618, 1680
HpyAV CCTTC 4 cut(s) 319, 698, 893, 1639
HpyCH4III ACNGT 3 cut(s) 800, 1346, 1676
HpyCH4IV ACGT 1 cut(s) 238
HpyF10VI GCNNNNNNNGC 3 cut(s) 357, 984, 1211
HpyF3I CTNAG 6 cut(s) 11, 134, 209, 218, 630, 1521
HpySE526I ACGT 1 cut(s) 238
HspAI GCGC 1 cut(s) 755
Kzo9I GATC 4 cut(s) 228, 830, 1249, 1504
LmnI GCTCC 3 cut(s) 634, 1032, 1300
Lsp1109I GCAGC 4 cut(s) 372, 779, 996, 1639
LweI GCATC 2 cut(s) 392, 1465
MaeI CTAG 7 cut(s) 204, 428, 509, 828, 896, 1187, 1274
MaeII ACGT 1 cut(s) 238
MaeIII GTNAC 1 cut(s) 868
MalI GATC 4 cut(s) 230, 832, 1251, 1506
MboI GATC 4 cut(s) 228, 830, 1249, 1504
MboII GAAGA 4 cut(s) 251, 435, 871, 1056
MfeI CAATTG 4 cut(s) 296, 392, 989, 1149
MflI RGATCY 1 cut(s) 1249
MlyI GAGTC 3 cut(s) 442, 573, 768
MmeI TCCRAC 2 cut(s) 434, 611
MnlI CCTC 6 cut(s) 639, 795, 915, 1077, 1402, 1581
MseI TTAA 7 cut(s) 99, 116, 404, 524, 612, 966, 1670
MslI CAYNNNNRTG 1 cut(s) 1379
MspA1I CMGCKG 1 cut(s) 978
MspI CCGG 1 cut(s) 87
MspR9I CCNGG 3 cut(s) 88, 233, 858
MunI CAATTG 4 cut(s) 296, 392, 989, 1149
Mva1269I GAATGC 1 cut(s) 333
MvaI CCWGG 2 cut(s) 233, 858
MwoI GCNNNNNNNGC 3 cut(s) 357, 984, 1211
NciI CCSGG 1 cut(s) 88
NcoI CCATGG 1 cut(s) 1132
NdeII GATC 4 cut(s) 228, 830, 1249, 1504
NlaIV GGNNCC 5 cut(s) 636, 953, 1034, 1251, 1296
NspI RCATGY 2 cut(s) 1024, 1211
PaqCI CACCTGC 1 cut(s) 627
PciI ACATGT 1 cut(s) 1207
PctI GAATGC 1 cut(s) 333
PfeI GAWTC 4 cut(s) 277, 532, 876, 1417
PflMI CCANNNNNTGG 2 cut(s) 707, 1304
PfoI TCCNGGA 1 cut(s) 856
PkrI GCNGC 4 cut(s) 362, 769, 986, 1654
PleI GAGTC 3 cut(s) 441, 573, 768
PpsI GAGTC 3 cut(s) 441, 573, 768
PscI ACATGT 1 cut(s) 1207
Psp6I CCWGG 2 cut(s) 231, 856
PspGI CCWGG 2 cut(s) 231, 856
PspN4I GGNNCC 5 cut(s) 636, 953, 1034, 1251, 1296
PspPI GGNCC 2 cut(s) 571, 710
PsrI GAACNNNNNNTAC 2 cut(s) 1137, 1169
PstI CTGCAG 1 cut(s) 1573
PsuI RGATCY 1 cut(s) 1249
PvuII CAGCTG 1 cut(s) 978
RsaI GTAC 4 cut(s) 662, 802, 1146, 1343
RsaNI GTAC 4 cut(s) 661, 801, 1145, 1342
RseI CAYNNNNRTG 1 cut(s) 1379
SalI GTCGAC 1 cut(s) 565
SaqAI TTAA 7 cut(s) 99, 116, 404, 524, 612, 966, 1670
SatI GCNGC 4 cut(s) 361, 768, 985, 1653
Sau3AI GATC 4 cut(s) 228, 830, 1249, 1504
Sau96I GGNCC 2 cut(s) 571, 710
SchI GAGTC 3 cut(s) 442, 573, 768
ScrFI CCNGG 3 cut(s) 88, 233, 858
SfaNI GCATC 2 cut(s) 392, 1465
SfcI CTRYAG 1 cut(s) 1569
SinI GGWCC 1 cut(s) 710
SmiMI CAYNNNNRTG 1 cut(s) 1379
SmlI CTYRAG 2 cut(s) 125, 1037
SmoI CTYRAG 2 cut(s) 125, 1037
SsiI CCGC 2 cut(s) 245, 1214
SspI AATATT 1 cut(s) 946
SspMI CTAG 7 cut(s) 204, 428, 509, 828, 896, 1187, 1274
StyD4I CCNGG 3 cut(s) 86, 231, 856
StyI CCWWGG 6 cut(s) 439, 574, 638, 688, 1005, 1132
TaaI ACNGT 3 cut(s) 800, 1346, 1676
TaiI ACGT 1 cut(s) 241
TaqI TCGA 4 cut(s) 566, 596, 746, 772
TatI WGTACW 2 cut(s) 800, 1341
TfiI GAWTC 4 cut(s) 277, 532, 876, 1417
Tru1I TTAA 7 cut(s) 99, 116, 404, 524, 612, 966, 1670
Tru9I TTAA 7 cut(s) 99, 116, 404, 524, 612, 966, 1670
TscAI CASTG 1 cut(s) 19
TseI GCWGC 4 cut(s) 360, 767, 984, 1652
TspDTI ATGAA 6 cut(s) 17, 501, 640, 1145, 1397, 1430
TspGWI ACGGA 2 cut(s) 702, 1531
TspRI CASTG 1 cut(s) 19
Van91I CCANNNNNTGG 2 cut(s) 707, 1304
VpaK11BI GGWCC 1 cut(s) 710
XapI RAATTY 5 cut(s) 554, 667, 696, 814, 1438
XbaI TCTAGA 2 cut(s) 895, 1186
XceI RCATGY 2 cut(s) 1024, 1211
XmiI GTMKAC 2 cut(s) 63, 566
XspI CTAG 7 cut(s) 204, 428, 509, 828, 896, 1187, 1274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.