RLG00000018081

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
25109230 .. 25118478
9249 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018081

Sequence Viewer

Length: 2937 bp
ATGGCAGCACAAACCAACCTTAACATCACCACAGACCGGTCTACTCTTCTTGCTCTCAAAGCCCGTATCACCAATGACCCTCGAAACATAGTCTTCACCAACTGGTCAACCACAGGCCCTGTTTGTAACTGGGTTGGAGTCACTTGTGGTGCACGCCATCATCGAATCGCAAAGTTGAACGTATCTCACTTTGGTCTCACAGGCGCCATTCCTCCGGAGCTAGGCAACTTATCTTTTCTTGTTGTTCTGGACTTCAAAAATAATAGTTTTCACGGTATCTTGCCTCAAGAATTGGCTTGCCTGCATCGGTTGAAGTTTATAGGCCTGACAAGCAACAAGTTCATGGGAGTCATTCCATCATGGTTTGGCTCCTTATTCAAACTTCAAGTATTCGGTTTGTGTGATAATCAATTTTCAGGTTCCATACCAGCTACAATCTTCAACTTATCTGCTCTGCAAATAATTAGTCTGTGTTCTAACGAACTCTCAGAAATACCAAATGAGATTGGAGCTCTAGATCACCTGGAGAAGTTGTCAGTGAACTTCAACGCCTTAATTAAAAGGAAAATTCCAAATGAGATCGGCACTTTGAATCATCTAAAAAAATTATTTGTGTCACAGAATGCCTTGAAAGGGCCTATCCCTATGACAATTTTCAACATGTCATCTCTGACTATTGTAGCTTTCTATAGAAACAACTTGAGTGGTAGACTTCCTGACAATATTGGTCAAAATCTTTCGAATATTCAAGAGTTGAATTTGTGTGAAAATCAGTTTAACGGTCCACTTCCATCCAAGTTATGGCAATGCAAACAACTTCTTCGATTAAACTTGAATCATAACAGCTTGACAGGAAATTGCAGATTCAGAGGTAACATCCCCAGTGATATTTGGAATTTGAGAAGCTTGATAATTTTAGACCTGGGAGAGAATCAATTGAGCGGGCCAATTCCAAGCTCAATGGGAAGACTACATAATCTTCAAGGTTTGTATATGTATGATAACACATTGCAAGGATACATTCCAGATGAGCTTTGTCAACAAGAAAACTTATTTTCTTTGTACTTGGGTGGGAATCAACTCTCTGGTTCTGTACCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGAGGACTATCCTTAGGGTCCAATTTGTTGAATTCCACAATCCCATCTTCCTTGTGGGGAACTGCAGATATCTTGGGACTAGACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGGTGCTGTTGGTAATTTGAAAGTTGCTATATACATAAATGTATCATACAACCAATTATCTGATAGTGTACCAAGTAGCATTGTAAGTTTATTGAGCTTGGTCAATCTCTCCTTAGCACATAACAATCTAGAAGGCCTTATTCCTAGTTCCTTTGCAACCTGCTTAAGCTTAGAACTGTTGGATTTATCTGGAAATAGTTTCACTGGAGTGATTCCAAAGTCTCTAGAAGCACTCTCATATCTCAAGCATCTGAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAAGCGGCGGTCCTTTCAAAAACTTCTCTGCTGAATCATTTGTTTCGAACCATGGACTCTGTGGTGGATCCCAATTTCAAGTTCCACCATGCAAGAGAAAAACTAGCATATCTATCTTGAAGTATGTTATTCCGGGGATCTTGTTAGCAATGCTTCTTGGGACCTCCATAATTTGGATGTTGATGTTACGCAGAAATAAGAATGCAACAGCTGCAGCACATATTATCTTGATGCCTCAAGTTTTACGCAGAAGGGTTTCATACCAAGAGCTCCTATGTGCGACAGATGGATTCAATGAAAGCAACTTACTTGGTATTGGGGGTTTTGGCTCAGTATATAAAGGAACAATTCCAGATGAGACAGATGTTGCAATAAAGGTTTTCAATTTGGATTTAGAAGGGGCATTTACAAGTTTTGAGGTTGAATGTGAAATGCTAAGTAATGTTCGTCACAGAAATCTTGTCAAAGTCATCAGTTGTTGTAGTCAAATTGATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGCATTCTCAGAATTCTTCTTTGGACTTGGTGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTACCTTCACCATGATTATGAAGTACCTATAGTCCATTGCGATTTGAAGCCGAGCAACATCTTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGTATTGCGAGACTCTTGGGTGGAGGAGATTCTATGACTCAAACTATGACCCTGGCCACAATTGGGTATATTGCTCTAGAGTATGGAATGGAAGGAATAGTGACCAGAAGAGGGGATGTGTATAGTTTCGGTATTGTAGTGATGGAAACATTTACAAGAAGGAAACCAACTGATGAGATCTTCATTGGGGAAATGAGATTAAGTCAATGCGTTGCAAATTACCTAGTTGCAAATGCGATAGCTGATGTTGTGGATGCTACTTTACTTGGAACTGAGGAGGATCATGGGTGCATTGAGGAGGAGGACCTCATGAGGTTCATGATTGAGGAAGAGGTGGAAGTTGCATTTTTGCTGAAGAGCTCTAAAAGATTAGCTGCCCCCATAGAGTTAATCTCAATTGAACTAAATTCGATGCTGGATGATCAGTTCAATCATAGCCTTGATCTAAATCTACGTCGCAAATCTGTGGTAATCGGCTTGTATGAGGGTGATCTGCTAAGGCAATGTAAAAGCTGTGGCCTCCGGTTCAAGTGTGAAGCACAGCACAGCAGGCATATGGATTGTCATGTCAAGAAGAACCATATGTCCAAAACCCGCAAGCAGAAGCCCTCTCGTAACTTCTATGCAACTACAAGCATGTGGCTCGTTACTGATACAGAGGCTGAGGCTGAGGCATTACTTTCTTAG

Protein Analysis

979

Amino Acids

107.87

Weight (kDa)

6.22

Isoelectric Point (pI)

37.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 11 - 49 2.4e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 127 - 185 5.7e-06 Leucine rich repeat
LRR_14 PF23598 144 - 225 1.6e-08 Leucine-rich repeat region
LRR_8 PF13855 302 - 361 4.9e-06 Leucine rich repeat
LRR_8 PF13855 447 - 506 5.5e-10 Leucine rich repeat
Pkinase PF00069 609 - 808 1.3e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 612 - 806 5.2e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1412
AccB1I GGYRCC 1 cut(s) 203
AccB7I CCANNNNNTGG 2 cut(s) 801, 1704
AccBSI CCGCTC 1 cut(s) 942
AccI GTMKAC 2 cut(s) 41, 709
AccIII TCCGGA 1 cut(s) 214
AciI CCGC 4 cut(s) 942, 1536, 1539, 2845
AclWI GGATC 4 cut(s) 1593, 1606, 1676, 2538
AcoI YGGCCR 1 cut(s) 2304
AcsI RAATTY 8 cut(s) 567, 757, 895, 1159, 1498, 1527, 2089, 2656
AcuI CTGAAG 1 cut(s) 2624
AcyI GRCGYC 1 cut(s) 204
AfaI GTAC 5 cut(s) 1064, 1095, 1314, 2153, 2175
AfiI CCNNNNNNNGG 9 cut(s) 36, 221, 633, 801, 1244, 1538, 1704, 2313, 2361
AflII CTTAAG 1 cut(s) 1408
AflIII ACRYGT 2 cut(s) 660, 2236
AgeI ACCGGT 1 cut(s) 36
AjnI CCWGG 3 cut(s) 522, 921, 2301
AjuI GAANNNNNNNTTGG 6 cut(s) 1512, 1544, 1596, 1628, 2081, 2113
AleI CACNNNNGTG 1 cut(s) 1451
AloI GAACNNNNNNTCC 4 cut(s) 2660, 2692, 2819, 2851
Alw21I GWGCWC 4 cut(s) 154, 514, 1803, 2612
Alw26I GTCTC 4 cut(s) 200, 1470, 1883, 2254
Alw44I GTGCAC 1 cut(s) 150
AlwI GGATC 4 cut(s) 1593, 1606, 1676, 2538
AlwNI CAGNNNCTG 3 cut(s) 119, 1250, 2912
Aor13HI TCCGGA 1 cut(s) 214
AoxI GGCC 7 cut(s) 115, 322, 635, 944, 1378, 2304, 2767
ApaLI GTGCAC 1 cut(s) 150
ApeKI GCWGC 4 cut(s) 5, 1742, 1745, 2624
ApoI RAATTY 8 cut(s) 567, 757, 895, 1159, 1498, 1527, 2089, 2656
ArsI GACNNNNNNTTYG 2 cut(s) 451, 483
AsiGI ACCGGT 1 cut(s) 36
Asp700I GAANNNNTTC 1 cut(s) 1786
AspLEI GCGC 1 cut(s) 206
AspS9I GGNCC 9 cut(s) 116, 635, 782, 944, 1146, 1235, 1541, 1692, 2554
AsuC2I CCSGG 1 cut(s) 1665
AsuHPI GGTGA 6 cut(s) 19, 61, 88, 512, 2150, 2750
AsuII TTCGAA 2 cut(s) 740, 1577
AvaII GGWCC 6 cut(s) 782, 1146, 1235, 1541, 1692, 2554
AxyI CCTNAGG 1 cut(s) 1141
BaeGI GKGCMC 1 cut(s) 154
BalI TGGCCA 1 cut(s) 2306
BamHI GGATCC 1 cut(s) 1598
BanI GGYRCC 1 cut(s) 203
BanII GRGCYC 3 cut(s) 514, 1803, 2612
BbsI GAAGAC 2 cut(s) 85, 973
Bbv12I GWGCWC 4 cut(s) 154, 514, 1803, 2612
BbvCI CCTCAGC 2 cut(s) 2913, 2919
BbvI GCAGC 4 cut(s) 17, 1729, 1757, 2611
BccI CCATC 6 cut(s) 165, 364, 799, 1180, 1811, 2386
BcgI CGANNNNNNTGC 2 cut(s) 2875, 2909
BciT130I CCWGG 3 cut(s) 524, 923, 2303
BciVI GTATCC 1 cut(s) 1010
BclI TGATCA 1 cut(s) 2671
BcnI CCSGG 1 cut(s) 1665
BcoDI GTCTC 4 cut(s) 200, 1470, 1883, 2254
BfmI CTRYAG 4 cut(s) 688, 1191, 1743, 2178
BfoI RGCGCY 1 cut(s) 207
BfrI CTTAAG 1 cut(s) 1408
BfuAI ACCTGC 1 cut(s) 1412
BfuI GTATCC 1 cut(s) 1010
BglII AGATCT 1 cut(s) 2427
BisI GCNGC 5 cut(s) 6, 1537, 1743, 1746, 2625
BlsI GCNGC 5 cut(s) 7, 1538, 1744, 1747, 2626
Bme1390I CCNGG 4 cut(s) 524, 923, 1665, 2303
Bme18I GGWCC 6 cut(s) 782, 1146, 1235, 1541, 1692, 2554
BmgT120I GGNCC 9 cut(s) 116, 635, 782, 944, 1146, 1235, 1541, 1692, 2554
BmiI GGNNCC 7 cut(s) 205, 370, 421, 1147, 1600, 1693, 2063
BmrFI CCNGG 4 cut(s) 524, 923, 1665, 2303
BmrI ACTGGG 2 cut(s) 139, 876
BmsI GCATC 7 cut(s) 313, 1130, 1501, 1752, 2147, 2494, 2652
BmuI ACTGGG 2 cut(s) 139, 876
BpiI GAAGAC 2 cut(s) 85, 973
BplI GAGNNNNNCTC 2 cut(s) 2627, 2659
BpmI CTGGAG 2 cut(s) 545, 1470
Bpu10I CCTNAGC 4 cut(s) 1357, 2747, 2913, 2919
Bpu14I TTCGAA 2 cut(s) 740, 1577
BpuEI CTTGAG 5 cut(s) 270, 721, 1472, 1752, 2087
BpuMI CCSGG 1 cut(s) 1665
BsaBI GATNNNNATC 1 cut(s) 2697
BsaHI GRCGYC 1 cut(s) 204
BsaI GGTCTC 1 cut(s) 200
BsaJI CCNNGG 5 cut(s) 922, 1519, 1582, 1664, 2301
BsaWI WCCGGW 3 cut(s) 36, 214, 2772
BsaXI ACNNNNNCTCC 2 cut(s) 518, 548
Bsc4I CCNNNNNNNGG 9 cut(s) 36, 221, 633, 801, 1244, 1538, 1704, 2313, 2361
Bse118I RCCGGY 1 cut(s) 36
Bse1I ACTGG 4 cut(s) 107, 134, 882, 1453
Bse21I CCTNAGG 1 cut(s) 1141
Bse3DI GCAATG 5 cut(s) 812, 1007, 1686, 2185, 2759
Bse8I GATNNNNATC 1 cut(s) 2697
BseAI TCCGGA 1 cut(s) 214
BseBI CCWGG 3 cut(s) 524, 923, 2303
BseDI CCNNGG 5 cut(s) 922, 1519, 1582, 1664, 2301
BseGI GGATG 7 cut(s) 791, 876, 1217, 1713, 2371, 2509, 2674
BseJI GATNNNNATC 1 cut(s) 2697
BseLI CCNNNNNNNGG 9 cut(s) 36, 221, 633, 801, 1244, 1538, 1704, 2313, 2361
BseMI GCAATG 5 cut(s) 812, 1007, 1686, 2185, 2759
BseMII CTCAG 6 cut(s) 501, 1875, 2099, 2514, 2904, 2910
BseNI ACTGG 4 cut(s) 107, 134, 882, 1453
BseRI GAGGAG 4 cut(s) 2289, 2540, 2561, 2564
BseSI GKGCMC 1 cut(s) 154
BseXI GCAGC 4 cut(s) 17, 1729, 1757, 2611
BsgI GTGCAG 1 cut(s) 2129
BshFI GGCC 7 cut(s) 117, 324, 637, 946, 1380, 2306, 2769
BshNI GGYRCC 1 cut(s) 203
BshTI ACCGGT 1 cut(s) 36
BsiHKAI GWGCWC 4 cut(s) 154, 514, 1803, 2612
BsiSI CCGG 4 cut(s) 37, 215, 1664, 2773
BslFI GGGAC 2 cut(s) 1218, 1705
BslI CCNNNNNNNGG 9 cut(s) 36, 221, 633, 801, 1244, 1538, 1704, 2313, 2361
BsmAI GTCTC 4 cut(s) 200, 1470, 1883, 2254
BsmFI GGGAC 2 cut(s) 1218, 1705
BsmI GAATGC 3 cut(s) 628, 1738, 2080
BsnI GGCC 7 cut(s) 117, 324, 637, 946, 1380, 2306, 2769
Bso31I GGTCTC 1 cut(s) 200
Bsp119I TTCGAA 2 cut(s) 740, 1577
Bsp1286I GDGCHC 4 cut(s) 154, 514, 1803, 2612
Bsp13I TCCGGA 1 cut(s) 214
Bsp143I GATC 9 cut(s) 517, 579, 1598, 1668, 2427, 2530, 2671, 2692, 2740
Bsp19I CCATGG 1 cut(s) 1582
BspACI CCGC 4 cut(s) 942, 1536, 1539, 2845
BspANI GGCC 7 cut(s) 117, 324, 637, 946, 1380, 2306, 2769
BspCNI CTCAG 6 cut(s) 500, 1874, 2098, 2515, 2905, 2911
BspEI TCCGGA 1 cut(s) 214
BspHI TCATGA 2 cut(s) 2559, 2568
BspLI GGNNCC 7 cut(s) 205, 370, 421, 1147, 1600, 1693, 2063
BspMAI CTGCAG 2 cut(s) 1195, 1747
BspMI ACCTGC 1 cut(s) 1412
BspPI GGATC 4 cut(s) 1593, 1606, 1676, 2538
BspQI GCTCTTC 1 cut(s) 2600
BspT104I TTCGAA 2 cut(s) 740, 1577
BspT107I GGYRCC 1 cut(s) 203
BspTI CTTAAG 1 cut(s) 1408
BspTNI GGTCTC 1 cut(s) 200
BsrBI CCGCTC 1 cut(s) 942
BsrDI GCAATG 5 cut(s) 812, 1007, 1686, 2185, 2759
BsrFI RCCGGY 1 cut(s) 36
BsrI ACTGG 4 cut(s) 107, 134, 882, 1453
BssAI RCCGGY 1 cut(s) 36
BssECI CCNNGG 5 cut(s) 922, 1519, 1582, 1664, 2301
BssMI GATC 9 cut(s) 517, 579, 1598, 1668, 2427, 2530, 2671, 2692, 2740
BssNI GRCGYC 1 cut(s) 204
BssT1I CCWWGG 2 cut(s) 1519, 1582
Bst2UI CCWGG 3 cut(s) 524, 923, 2303
Bst4CI ACNGT 3 cut(s) 275, 782, 1422
Bst6I CTCTTC 4 cut(s) 51, 2353, 2574, 2600
BstACI GRCGYC 1 cut(s) 204
BstAFI CTTAAG 1 cut(s) 1408
BstAPI GCANNNNNTGC 2 cut(s) 1742, 2240
BstBI TTCGAA 2 cut(s) 740, 1577
BstC8I GCNNGC 6 cut(s) 154, 298, 302, 944, 2801, 2849
BstDSI CCRYGG 1 cut(s) 1582
BstENI CCTNNNNNAGG 1 cut(s) 1242
BstF5I GGATG 7 cut(s) 791, 876, 1217, 1713, 2371, 2509, 2674
BstH2I RGCGCY 1 cut(s) 207
BstHHI GCGC 1 cut(s) 206
BstKTI GATC 9 cut(s) 520, 582, 1601, 1671, 2430, 2533, 2674, 2695, 2743
BstMAI GTCTC 4 cut(s) 200, 1470, 1883, 2254
BstMBI GATC 9 cut(s) 517, 579, 1598, 1668, 2427, 2530, 2671, 2692, 2740
BstMWI GCNNNNNNNGC 5 cut(s) 59, 330, 1742, 2240, 2800
BstNI CCWGG 3 cut(s) 524, 923, 2303
BstNSI RCATGY 4 cut(s) 664, 2053, 2240, 2890
BstSCI CCNGG 4 cut(s) 522, 921, 1663, 2301
BstSFI CTRYAG 4 cut(s) 688, 1191, 1743, 2178
BstSLI GKGCMC 1 cut(s) 154
BstV1I GCAGC 4 cut(s) 17, 1729, 1757, 2611
BstV2I GAAGAC 2 cut(s) 85, 973
BstX2I RGATCY 3 cut(s) 1598, 1668, 2427
BstYI RGATCY 3 cut(s) 1598, 1668, 2427
Bsu36I CCTNAGG 1 cut(s) 1141
BsuI GTATCC 1 cut(s) 1010
BsuRI GGCC 7 cut(s) 117, 324, 637, 946, 1380, 2306, 2769
BtgI CCRYGG 1 cut(s) 1582
BtsCI GGATG 7 cut(s) 791, 876, 1217, 1713, 2371, 2509, 2674
BtsIMutI CAGTG 3 cut(s) 543, 889, 1446
BveI ACCTGC 1 cut(s) 1412
Cac8I GCNNGC 6 cut(s) 154, 298, 302, 944, 2801, 2849
CaiI CAGNNNCTG 3 cut(s) 119, 1250, 2912
CciI TCATGA 2 cut(s) 2559, 2568
CfoI GCGC 1 cut(s) 206
Cfr10I RCCGGY 1 cut(s) 36
Cfr13I GGNCC 9 cut(s) 116, 635, 782, 944, 1146, 1235, 1541, 1692, 2554
Csp6I GTAC 5 cut(s) 1063, 1094, 1313, 2152, 2174
CspAI ACCGGT 1 cut(s) 36
CspCI CAANNNNNGTGG 2 cut(s) 685, 720
CviQI GTAC 5 cut(s) 1063, 1094, 1313, 2152, 2174
DinI GGCGCC 1 cut(s) 205
DpnI GATC 9 cut(s) 519, 581, 1600, 1670, 2429, 2532, 2673, 2694, 2742
DpnII GATC 9 cut(s) 517, 579, 1598, 1668, 2427, 2530, 2671, 2692, 2740
EaeI YGGCCR 1 cut(s) 2304
Eam1104I CTCTTC 4 cut(s) 51, 2353, 2574, 2600
EarI CTCTTC 4 cut(s) 51, 2353, 2574, 2600
Ecl136II GAGCTC 3 cut(s) 512, 1801, 2610
Eco130I CCWWGG 2 cut(s) 1519, 1582
Eco147I AGGCCT 2 cut(s) 324, 1380
Eco24I GRGCYC 3 cut(s) 514, 1803, 2612
Eco31I GGTCTC 1 cut(s) 200
Eco32I GATATC 1 cut(s) 1198
Eco47I GGWCC 6 cut(s) 782, 1146, 1235, 1541, 1692, 2554
Eco53kI GAGCTC 3 cut(s) 512, 1801, 2610
Eco57I CTGAAG 1 cut(s) 2624
Eco81I CCTNAGG 1 cut(s) 1141
EcoICRI GAGCTC 3 cut(s) 512, 1801, 2610
EcoNI CCTNNNNNAGG 1 cut(s) 1242
EcoO109I RGGNCCY 4 cut(s) 116, 635, 1692, 2554
EcoRI GAATTC 2 cut(s) 1159, 2089
EcoRII CCWGG 3 cut(s) 522, 921, 2301
EcoRV GATATC 1 cut(s) 1198
EcoT14I CCWWGG 2 cut(s) 1519, 1582
EcoT38I GRGCYC 3 cut(s) 514, 1803, 2612
EgeI GGCGCC 1 cut(s) 205
EheI GGCGCC 1 cut(s) 205
ErhI CCWWGG 2 cut(s) 1519, 1582
FaqI GGGAC 2 cut(s) 1218, 1705
FauI CCCGC 2 cut(s) 935, 2852
FauNDI CATATG 2 cut(s) 2805, 2832
FbaI TGATCA 1 cut(s) 2671
FblI GTMKAC 2 cut(s) 41, 709
Fnu4HI GCNGC 5 cut(s) 6, 1537, 1743, 1746, 2625
FokI GGATG 7 cut(s) 778, 863, 1204, 1720, 2378, 2516, 2681
FriOI GRGCYC 3 cut(s) 514, 1803, 2612
Fsp4HI GCNGC 5 cut(s) 6, 1537, 1743, 1746, 2625
GlaI GCGC 1 cut(s) 205
GluI GCNGC 5 cut(s) 6, 1537, 1743, 1746, 2625
GsuI CTGGAG 2 cut(s) 545, 1470
HaeII RGCGCY 1 cut(s) 207
HaeIII GGCC 7 cut(s) 117, 324, 637, 946, 1380, 2306, 2769
HapII CCGG 4 cut(s) 37, 215, 1664, 2773
HhaI GCGC 1 cut(s) 206
Hin1I GRCGYC 1 cut(s) 204
Hin6I GCGC 1 cut(s) 204
HinP1I GCGC 1 cut(s) 204
HincII GTYRAC 2 cut(s) 108, 1040
HindII GTYRAC 2 cut(s) 108, 1040
HindIII AAGCTT 2 cut(s) 904, 1411
HpaII CCGG 4 cut(s) 37, 215, 1664, 2773
HphI GGTGA 6 cut(s) 19, 61, 88, 512, 2150, 2750
Hpy166II GTNNAC 8 cut(s) 42, 108, 152, 541, 710, 785, 1040, 1313
Hpy188I TCNGA 6 cut(s) 490, 672, 869, 1306, 1497, 2088
Hpy8I GTNNAC 8 cut(s) 42, 108, 152, 541, 710, 785, 1040, 1313
Hpy99I CGWCG 1 cut(s) 2709
HpyAV CCTTC 7 cut(s) 1107, 1370, 1776, 1922, 2165, 2336, 2403
HpyCH4III ACNGT 3 cut(s) 275, 782, 1422
HpyCH4IV ACGT 2 cut(s) 180, 2704
HpyF10VI GCNNNNNNNGC 5 cut(s) 59, 330, 1742, 2240, 2800
HpySE526I ACGT 2 cut(s) 180, 2704
Hsp92I GRCGYC 1 cut(s) 204
HspAI GCGC 1 cut(s) 204
KasI GGCGCC 1 cut(s) 203
Kpn2I TCCGGA 1 cut(s) 214
Ksp22I TGATCA 1 cut(s) 2671
Kzo9I GATC 9 cut(s) 517, 579, 1598, 1668, 2427, 2530, 2671, 2692, 2740
LguI GCTCTTC 1 cut(s) 2600
LmnI GCTCC 5 cut(s) 217, 374, 509, 1806, 2061
Lsp1109I GCAGC 4 cut(s) 17, 1729, 1757, 2611
LweI GCATC 7 cut(s) 313, 1130, 1501, 1752, 2147, 2494, 2652
MaeII ACGT 2 cut(s) 180, 2704
MaeIII GTNAC 9 cut(s) 125, 139, 615, 872, 1716, 1979, 2350, 2864, 2896
MalI GATC 9 cut(s) 519, 581, 1600, 1670, 2429, 2532, 2673, 2694, 2742
MbiI CCGCTC 1 cut(s) 942
MboI GATC 9 cut(s) 517, 579, 1598, 1668, 2427, 2530, 2671, 2692, 2740
MfeI CAATTG 3 cut(s) 935, 2310, 2646
MflI RGATCY 3 cut(s) 1598, 1668, 2427
MhlI GDGCHC 4 cut(s) 154, 514, 1803, 2612
MlsI TGGCCA 1 cut(s) 2306
MluNI TGGCCA 1 cut(s) 2306
Mly113I GGCGCC 1 cut(s) 204
MlyI GAGTC 6 cut(s) 147, 357, 1509, 1581, 2256, 2281
MmeI TCCRAC 3 cut(s) 115, 1404, 2097
Mox20I TGGCCA 1 cut(s) 2306
MroI TCCGGA 1 cut(s) 214
MroXI GAANNNNTTC 1 cut(s) 1786
MscI TGGCCA 1 cut(s) 2306
MseI TTAA 8 cut(s) 21, 554, 558, 777, 827, 1409, 2450, 2639
MslI CAYNNNNRTG 2 cut(s) 1451, 2166
Msp20I TGGCCA 1 cut(s) 2306
MspA1I CMGCKG 1 cut(s) 1742
MspCI CTTAAG 1 cut(s) 1408
MspI CCGG 4 cut(s) 37, 215, 1664, 2773
MspR9I CCNGG 4 cut(s) 524, 923, 1665, 2303
MunI CAATTG 3 cut(s) 935, 2310, 2646
Mva1269I GAATGC 3 cut(s) 628, 1738, 2080
MvaI CCWGG 3 cut(s) 524, 923, 2303
MwoI GCNNNNNNNGC 5 cut(s) 59, 330, 1742, 2240, 2800
NarI GGCGCC 1 cut(s) 204
NciI CCSGG 1 cut(s) 1665
NcoI CCATGG 1 cut(s) 1582
NdeI CATATG 2 cut(s) 2805, 2832
NdeII GATC 9 cut(s) 517, 579, 1598, 1668, 2427, 2530, 2671, 2692, 2740
NlaIV GGNNCC 7 cut(s) 205, 370, 421, 1147, 1600, 1693, 2063
NmeAIII GCCGAG 1 cut(s) 2226
NmuCI GTSAC 4 cut(s) 139, 615, 1979, 2350
NspI RCATGY 4 cut(s) 664, 2053, 2240, 2890
NspV TTCGAA 2 cut(s) 740, 1577
OliI CACNNNNGTG 1 cut(s) 1451
PacI TTAATTAA 1 cut(s) 558
PagI TCATGA 2 cut(s) 2559, 2568
PceI AGGCCT 2 cut(s) 324, 1380
PciI ACATGT 2 cut(s) 660, 2236
PciSI GCTCTTC 1 cut(s) 2600
PcsI WCGNNNNNNNCGW 1 cut(s) 160
PctI GAATGC 3 cut(s) 628, 1738, 2080
PdmI GAANNNNTTC 1 cut(s) 1786
PflMI CCANNNNNTGG 2 cut(s) 801, 1704
PinAI ACCGGT 1 cut(s) 36
PkrI GCNGC 5 cut(s) 7, 1538, 1744, 1747, 2626
PleI GAGTC 6 cut(s) 146, 356, 1509, 1581, 2256, 2281
PluTI GGCGCC 1 cut(s) 207
PpsI GAGTC 6 cut(s) 146, 356, 1509, 1581, 2256, 2281
PpuMI RGGWCCY 2 cut(s) 1692, 2554
PscI ACATGT 2 cut(s) 660, 2236
Psp124BI GAGCTC 3 cut(s) 514, 1803, 2612
Psp5II RGGWCCY 2 cut(s) 1692, 2554
Psp6I CCWGG 3 cut(s) 522, 921, 2301
PspGI CCWGG 3 cut(s) 522, 921, 2301
PspN4I GGNNCC 7 cut(s) 205, 370, 421, 1147, 1600, 1693, 2063
PspPI GGNCC 9 cut(s) 116, 635, 782, 944, 1146, 1235, 1541, 1692, 2554
PspPPI RGGWCCY 2 cut(s) 1692, 2554
PstI CTGCAG 2 cut(s) 1195, 1747
PstNI CAGNNNCTG 3 cut(s) 119, 1250, 2912
PsuI RGATCY 3 cut(s) 1598, 1668, 2427
PvuII CAGCTG 1 cut(s) 1742
RsaI GTAC 5 cut(s) 1064, 1095, 1314, 2153, 2175
RsaNI GTAC 5 cut(s) 1063, 1094, 1313, 2152, 2174
RseI CAYNNNNRTG 2 cut(s) 1451, 2166
SacI GAGCTC 3 cut(s) 514, 1803, 2612
SapI GCTCTTC 1 cut(s) 2600
SaqAI TTAA 8 cut(s) 21, 554, 558, 777, 827, 1409, 2450, 2639
SatI GCNGC 5 cut(s) 6, 1537, 1743, 1746, 2625
Sau3AI GATC 9 cut(s) 517, 579, 1598, 1668, 2427, 2530, 2671, 2692, 2740
Sau96I GGNCC 9 cut(s) 116, 635, 782, 944, 1146, 1235, 1541, 1692, 2554
SchI GAGTC 6 cut(s) 147, 357, 1509, 1581, 2256, 2281
ScrFI CCNGG 4 cut(s) 524, 923, 1665, 2303
SduI GDGCHC 4 cut(s) 154, 514, 1803, 2612
SfaNI GCATC 7 cut(s) 313, 1130, 1501, 1752, 2147, 2494, 2652
SfcI CTRYAG 4 cut(s) 688, 1191, 1743, 2178
SfoI GGCGCC 1 cut(s) 205
SfuI TTCGAA 2 cut(s) 740, 1577
SinI GGWCC 6 cut(s) 782, 1146, 1235, 1541, 1692, 2554
SmiMI CAYNNNNRTG 2 cut(s) 1451, 2166
SmlI CTYRAG 6 cut(s) 285, 700, 1408, 1487, 1767, 2066
SmoI CTYRAG 6 cut(s) 285, 700, 1408, 1487, 1767, 2066
SseBI AGGCCT 2 cut(s) 324, 1380
SsiI CCGC 4 cut(s) 942, 1536, 1539, 2845
SspDI GGCGCC 1 cut(s) 203
SspI AATATT 2 cut(s) 724, 745
SstI GAGCTC 3 cut(s) 514, 1803, 2612
StuI AGGCCT 2 cut(s) 324, 1380
StyD4I CCNGG 4 cut(s) 522, 921, 1663, 2301
StyI CCWWGG 2 cut(s) 1519, 1582
TaaI ACNGT 3 cut(s) 275, 782, 1422
TaiI ACGT 2 cut(s) 183, 2707
TaqI TCGA 6 cut(s) 82, 163, 740, 823, 1577, 2660
TatI WGTACW 1 cut(s) 1062
TauI GCSGC 1 cut(s) 1539
Tru1I TTAA 8 cut(s) 21, 554, 558, 777, 827, 1409, 2450, 2639
Tru9I TTAA 8 cut(s) 21, 554, 558, 777, 827, 1409, 2450, 2639
TscAI CASTG 3 cut(s) 543, 889, 1453
TseFI GTSAC 4 cut(s) 139, 615, 1979, 2350
TseI GCWGC 4 cut(s) 5, 1742, 1745, 2624
Tsp45I GTSAC 4 cut(s) 139, 615, 1979, 2350
TspDTI ATGAA 6 cut(s) 331, 1779, 1842, 2184, 2422, 2557
TspRI CASTG 3 cut(s) 543, 889, 1453
Van91I CCANNNNNTGG 2 cut(s) 801, 1704
Vha464I CTTAAG 1 cut(s) 1408
VneI GTGCAC 1 cut(s) 150
VpaK11BI GGWCC 6 cut(s) 782, 1146, 1235, 1541, 1692, 2554
XagI CCTNNNNNAGG 1 cut(s) 1242
XapI RAATTY 8 cut(s) 567, 757, 895, 1159, 1498, 1527, 2089, 2656
XbaI TCTAGA 4 cut(s) 514, 1372, 1468, 2326
XceI RCATGY 4 cut(s) 664, 2053, 2240, 2890
XcmI CCANNNNNNNNNTGG 3 cut(s) 798, 1179, 1589
XmiI GTMKAC 2 cut(s) 41, 709
XmnI GAANNNNTTC 1 cut(s) 1786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.