Rmu_sc0007109.1_g000006

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007109.1
Physical Location & Seq
Forward (+)
18577 .. 19603
1027 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007109.1_g000006.1.cds

Sequence Viewer

Length: 597 bp
atgagaggaagtttcccttttactgtagtgacgaccggagaagaaagcaggggtcgtgggtgcccagagaagatttctggtgcttacggcgatgacgcgtgggttagttttgggaataccccaatgacggagaagctgccagtggatcgtcggagaccgctgagcacgatggtggtggaggtgatgcggggttatgcctggatatccactgagtatggaatggatggaatagttaccagaagtggggatatgtatagttttggtgttgtagtgatggagacattcacaaaaaggaagccaacagatgcgatgtttgtgggggaaatgaatttaaagcactgggttgcaaattcacttcgtgcagatgcaatagttgaagttgttgataccactttactttggacagaggaatatcatgactttgtgagcaagagagattgtttatcatctattatgagattgactattgcttgttgtggagaatcaccagaagagaggataaatatgcacgagggtctagccacgctgaacaaaatcaagatcaaatttttgaagaacgcttcagaaggtgaggtattgagccgtcatggcctctga

Protein Analysis

198

Amino Acids

22.22

Weight (kDa)

5.86

Isoelectric Point (pI)

38.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 60
AccII CGCG 1 cut(s) 98
AciI CCGC 2 cut(s) 158, 187
AclWI GGATC 1 cut(s) 153
AcsI RAATTY 3 cut(s) 328, 349, 545
AcuI CTGAAG 1 cut(s) 546
AdeI CACNNNGTG 1 cut(s) 359
AfiI CCNNNNNNNGG 2 cut(s) 127, 243
AflIII ACRYGT 1 cut(s) 96
AgsI TTSAA 2 cut(s) 377, 553
AjnI CCWGG 1 cut(s) 197
AleI CACNNNNGTG 1 cut(s) 170
AluBI AGCT 1 cut(s) 136
AluI AGCT 1 cut(s) 136
Alw21I GWGCWC 1 cut(s) 167
Alw26I GTCTC 2 cut(s) 148, 272
AlwI GGATC 1 cut(s) 153
AoxI GGCC 1 cut(s) 589
ApeKI GCWGC 1 cut(s) 136
ApoI RAATTY 3 cut(s) 328, 349, 545
AsuHPI GGTGA 3 cut(s) 193, 477, 581
BaeGI GKGCMC 1 cut(s) 65
BanI GGYRCC 1 cut(s) 60
BauI CACGAG 1 cut(s) 509
Bbv12I GWGCWC 1 cut(s) 167
BbvI GCAGC 1 cut(s) 123
BccI CCATC 3 cut(s) 163, 218, 268
BceAI ACGGC 2 cut(s) 103, 567
BciT130I CCWGG 1 cut(s) 199
BcoDI GTCTC 2 cut(s) 148, 272
BfaI CTAG 1 cut(s) 518
BfmI CTRYAG 1 cut(s) 24
BglI GCCNNNNNGGC 1 cut(s) 588
BisI GCNGC 1 cut(s) 137
BlpI GCTNAGC 1 cut(s) 161
BlsI GCNGC 1 cut(s) 138
Bme1390I CCNGG 1 cut(s) 199
BmiI GGNNCC 1 cut(s) 62
BmrFI CCNGG 1 cut(s) 199
BmrI ACTGGG 1 cut(s) 349
BmsI GCATC 3 cut(s) 174, 295, 355
BmuI ACTGGG 1 cut(s) 349
Bpu1102I GCTNAGC 1 cut(s) 161
BsaI GGTCTC 1 cut(s) 148
BsaWI WCCGGW 1 cut(s) 35
Bsc4I CCNNNNNNNGG 2 cut(s) 127, 243
Bse1I ACTGG 2 cut(s) 140, 344
BseBI CCWGG 1 cut(s) 199
BseGI GGATG 1 cut(s) 229
BseLI CCNNNNNNNGG 2 cut(s) 127, 243
BseMII CTCAG 2 cut(s) 152, 201
BseNI ACTGG 2 cut(s) 140, 344
BseSI GKGCMC 1 cut(s) 65
BseXI GCAGC 1 cut(s) 123
BsgI GTGCAG 1 cut(s) 381
Bsh1236I CGCG 1 cut(s) 98
Bsh1285I CGRYCG 1 cut(s) 36
BshFI GGCC 1 cut(s) 591
BshNI GGYRCC 1 cut(s) 60
BsiEI CGRYCG 1 cut(s) 36
BsiHKAI GWGCWC 1 cut(s) 167
BsiSI CCGG 1 cut(s) 36
BslI CCNNNNNNNGG 2 cut(s) 127, 243
BsmAI GTCTC 2 cut(s) 148, 272
BsnI GGCC 1 cut(s) 591
Bso31I GGTCTC 1 cut(s) 148
Bsp1286I GDGCHC 2 cut(s) 65, 167
Bsp143I GATC 2 cut(s) 145, 540
Bsp1720I GCTNAGC 1 cut(s) 161
BspACI CCGC 2 cut(s) 158, 187
BspANI GGCC 1 cut(s) 591
BspCNI CTCAG 2 cut(s) 153, 202
BspFNI CGCG 1 cut(s) 98
BspHI TCATGA 1 cut(s) 415
BspLI GGNNCC 1 cut(s) 62
BspPI GGATC 1 cut(s) 153
BspT107I GGYRCC 1 cut(s) 60
BspTNI GGTCTC 1 cut(s) 148
BsrI ACTGG 2 cut(s) 140, 344
BssMI GATC 2 cut(s) 145, 540
BssSI CACGAG 1 cut(s) 509
Bst2BI CACGAG 1 cut(s) 509
Bst2UI CCWGG 1 cut(s) 199
Bst4CI ACNGT 1 cut(s) 25
Bst6I CTCTTC 1 cut(s) 486
BstDEI CTNAG 2 cut(s) 161, 210
BstF5I GGATG 1 cut(s) 229
BstFNI CGCG 1 cut(s) 98
BstKTI GATC 2 cut(s) 148, 543
BstMAI GTCTC 2 cut(s) 148, 272
BstMBI GATC 2 cut(s) 145, 540
BstMCI CGRYCG 1 cut(s) 36
BstMWI GCNNNNNNNGC 1 cut(s) 588
BstNI CCWGG 1 cut(s) 199
BstSCI CCNGG 1 cut(s) 197
BstSFI CTRYAG 1 cut(s) 24
BstSLI GKGCMC 1 cut(s) 65
BstUI CGCG 1 cut(s) 98
BstV1I GCAGC 1 cut(s) 123
BsuRI GGCC 1 cut(s) 591
BtgZI GCGATG 2 cut(s) 105, 323
BtsCI GGATG 1 cut(s) 229
BtsIMutI CAGTG 3 cut(s) 147, 207, 337
CciI TCATGA 1 cut(s) 415
CseI GACGC 1 cut(s) 104
CviAII CATG 2 cut(s) 416, 587
CviJI RGCY 5 cut(s) 136, 298, 521, 582, 591
CviKI_1 RGCY 5 cut(s) 136, 298, 521, 582, 591
DdeI CTNAG 2 cut(s) 161, 210
DpnI GATC 2 cut(s) 147, 542
DpnII GATC 2 cut(s) 145, 540
DraI TTTAAA 1 cut(s) 333
DraIII CACNNNGTG 1 cut(s) 359
Eam1104I CTCTTC 1 cut(s) 486
EarI CTCTTC 1 cut(s) 486
Eco31I GGTCTC 1 cut(s) 148
Eco32I GATATC 1 cut(s) 204
Eco57I CTGAAG 1 cut(s) 546
EcoRII CCWGG 1 cut(s) 197
EcoRV GATATC 1 cut(s) 204
FaeI CATG 2 cut(s) 419, 590
FaiI YATR 8 cut(s) 195, 216, 251, 255, 417, 455, 506, 588
FalI AAGNNNNNCTT 1 cut(s) 33
FatI CATG 2 cut(s) 415, 586
FauI CCCGC 1 cut(s) 180
Fnu4HI GCNGC 1 cut(s) 137
FokI GGATG 1 cut(s) 236
Fsp4HI GCNGC 1 cut(s) 137
FspBI CTAG 1 cut(s) 518
GluI GCNGC 1 cut(s) 137
HaeIII GGCC 1 cut(s) 591
HapII CCGG 1 cut(s) 36
HgaI GACGC 1 cut(s) 104
Hin1II CATG 2 cut(s) 419, 590
HinfI GANTC 1 cut(s) 482
HpaII CCGG 1 cut(s) 36
HphI GGTGA 3 cut(s) 193, 477, 581
Hpy188I TCNGA 3 cut(s) 153, 565, 596
Hpy188III TCNNGA 2 cut(s) 416, 538
Hpy99I CGWCG 1 cut(s) 153
HpyAV CCTTC 1 cut(s) 560
HpyCH4III ACNGT 1 cut(s) 25
HpyCH4V TGCA 4 cut(s) 347, 362, 368, 508
HpyF10VI GCNNNNNNNGC 1 cut(s) 588
HpyF3I CTNAG 2 cut(s) 161, 210
Hsp92II CATG 2 cut(s) 419, 590
Kzo9I GATC 2 cut(s) 145, 540
Lsp1109I GCAGC 1 cut(s) 123
LweI GCATC 3 cut(s) 174, 295, 355
MaeI CTAG 1 cut(s) 518
MaeIII GTNAC 2 cut(s) 28, 232
MalI GATC 2 cut(s) 147, 542
MboI GATC 2 cut(s) 145, 540
MboII GAAGA 4 cut(s) 53, 82, 503, 565
MhlI GDGCHC 2 cut(s) 65, 167
MluCI AATT 3 cut(s) 328, 349, 545
MluI ACGCGT 1 cut(s) 96
MmeI TCCRAC 1 cut(s) 131
MnlI CCTC 5 cut(s) 172, 400, 489, 505, 565
MseI TTAA 1 cut(s) 332
MslI CAYNNNNRTG 1 cut(s) 170
MspA1I CMGCKG 1 cut(s) 160
MspI CCGG 1 cut(s) 36
MspR9I CCNGG 1 cut(s) 199
MvaI CCWGG 1 cut(s) 199
MvnI CGCG 1 cut(s) 98
MwoI GCNNNNNNNGC 1 cut(s) 588
NdeII GATC 2 cut(s) 145, 540
NlaIII CATG 2 cut(s) 419, 590
NlaIV GGNNCC 1 cut(s) 62
NmuCI GTSAC 1 cut(s) 28
OliI CACNNNNGTG 1 cut(s) 170
PagI TCATGA 1 cut(s) 415
PfeI GAWTC 1 cut(s) 482
PkrI GCNGC 1 cut(s) 138
Psp6I CCWGG 1 cut(s) 197
PspGI CCWGG 1 cut(s) 197
PspN4I GGNNCC 1 cut(s) 62
RseI CAYNNNNRTG 1 cut(s) 170
SaqAI TTAA 1 cut(s) 332
SatI GCNGC 1 cut(s) 137
Sau3AI GATC 2 cut(s) 145, 540
ScrFI CCNGG 1 cut(s) 199
SduI GDGCHC 2 cut(s) 65, 167
SetI ASST 4 cut(s) 138, 183, 571, 576
SfaNI GCATC 3 cut(s) 174, 295, 355
SfcI CTRYAG 1 cut(s) 24
SmiMI CAYNNNNRTG 1 cut(s) 170
Sse9I AATT 3 cut(s) 328, 349, 545
SsiI CCGC 2 cut(s) 158, 187
SspMI CTAG 1 cut(s) 518
StyD4I CCNGG 1 cut(s) 197
TaaI ACNGT 1 cut(s) 25
TasI AATT 3 cut(s) 328, 349, 545
TfiI GAWTC 1 cut(s) 482
Tru1I TTAA 1 cut(s) 332
Tru9I TTAA 1 cut(s) 332
TscAI CASTG 3 cut(s) 147, 214, 344
TseFI GTSAC 1 cut(s) 28
TseI GCWGC 1 cut(s) 136
Tsp45I GTSAC 1 cut(s) 28
TspDTI ATGAA 1 cut(s) 341
TspGWI ACGGA 1 cut(s) 143
TspRI CASTG 3 cut(s) 147, 214, 344
XapI RAATTY 3 cut(s) 328, 349, 545
XspI CTAG 1 cut(s) 518
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.