Rw4G009570

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
21591522 .. 21595070
3549 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G009570.1

Sequence Viewer

Length: 3360 bp
ATGTTGATGCAACGAATACTCTTTCTTTCTGGAGTTGTGTTACTGCACTACTCATGCTTACTTCACCTCGCCATTTCTTCTTCAAACCTCACAGATCAATCAGGTCTCCTTGCCATTCAATCCAAACTCACTGTCGACCCTACCAATACTGTCTTGGGTGGTAACTGGACCACTGAAACAAGTTTCTGTAATTGGTTTGGGGTTTCTTGTAGTAAACGCAAGCAAAGAGTGACTGCCTTGAAGCTTCCCTATATGGGTCTCCAAGGCACCATTTCCCCTAATATCGGGAACCTCTCCTTCCTAGTCCTTATTGATCTACAAAATAATAGCTTCACAGGGTCCCTGCCACATGAAATCAGTCGCTTACATCGTTTGAGAACACTTGTAGTCCAAGTTAACCAGTTGGAAGGAACCATTCCTCCAGCTTTACAGCACTGTCAGAAGCTTGAAATCCTATCCCTTTCATATAACAGGCTAAGTGGTCGAATACCTATAGAGTTGGGTTTCTTACCCAAGCTTCGGAAACTATATCTTGGTGTAAACAATTTTGTGGCTGGTAATATTCCAGTATCTCTGGGCAACATTTCAACATTACAAGAATTGAGTCTACCCGAAAGTGGTCTCACAGGTTCATTCCCTCACACTCTACTTAACCTGTCTTCTCTGGTTACTATATCTCTGTATAAAAATAACATTTCTGGAAGTCTTCATGATGTGGACATCTGCCATTATTGGCCTAATATTCAAATCCTTCAATTTGCTAACAACAAATTCAGTGGTGAGCTCCCTTCCAGAATTGATCGATGCAGAGAGATTGTGGTCCTTTCTTTCTCAAATAATAGGCTTATCGGAAGTATTCCCCAATATATTGGGGCTTTACAAAATCTTGAAGAGCTTCATCTTGATTTCAATAGCCTAACTGGCTTTATACCTCCCACTATAGGTAACTTGTCGAACCTGAAGCAATTTTTGGTCCAAAATAATAACATTACAGGAGGTATTCCGAAGGATTTGGGGCGCCTTTCTAATCTGCAGAGACTCGTTTTGGCTAACAATAGCCTAACTGGTGCAATACCCTTTGATATTTTCAACATTTCCTCCTTACAGATTTTCTCAACAGCATTTAATTCCCTTTCTGGAACTTTTCCTTCATCAACTGGAATTTTACTTCCTAATATTGAAGGTCTCTATCTTTCTGCCAATCAATTTGCTGGAGCTATCCCAGCATACTTTTCTAATTTTTCCAAGCTTCATTTGCTTGATCTTAGCCAAAATTTACTTTATGGAGCAATACCCATGAGTCTTGGTAGCATAAAGAATCTCCAAATCCTTAATTTGGGCAGAAATCAATTAAGTGGGGAACCTGGAGTTCTTGAACTTAGATTCCTTTCTTCTATATTCAATAGCAGTTCACTGAGGGTTTTGGCTTTGGATGACAATCCTCTCAATGGCATCATGCCTGATTCTTTTAGAAATCAATCTTATTCCTTCCAGAACATTTATGCCCCAAGGTGCCAAATCAAAGGTCACATACCATCATCAATTGGTTTTTTGAAAAACTTGACCTCCCTTGTCTTGTTGAACAACAATATGACTGGAAATCTTCCATCATCAATTGGGCGATTGGAGATGATGCATAGATTGTATCTTGATAGTAACAATATCGAAGGGCTCATTCCAGATGAGCTTTGTCTTTTGAGGAACCTAGGAGAGCTATTACTATCAAATAACAACTTCTCAGGAGTGATCCCAAGTTGTATAGCAAACCTTGAAGGCCTTCAAAAAGTCCTCCTCAATTCCAATAGACTGACATCAACCGTACCAATGAGTCTATGGAACCTCGAAAATCTCGTGTTCCTGGATTTGTCATTCAATTCTCTTAGTGGAGACTTACCTTCAAGCATGAGAAAGACCAAGGTTCTTCAAATGGTCGATTTATCCTCAAATCAAATCAGTGGAAACATTCCAACTGTTATTGGCGAATTTCAAAGCTTGAGTTCTTTAAATTTGTCAAACAACATGTTTGTGGGATCTGTTCCCCAAAGTTTTGGTGATCTAAAAGGATTGGAAATTTTAGATCTATCATACAACACCTTGTCAGGCACGATACCCAAGTCCCTAGAAACGCTCAAATACCTCAAGTATTTGAACTTGTCTTATAACAAGCTCTCGGGAGAGATTCCTTCTGAGGGACCTTTTGTCAACTTCAGTGCACAATCATTCTTGGGAAATATGGCACTTTGTCAGAGATCACCAAACTTTGGAGTCTCACCCTGCAGGAATCCTAGGGCTCGCAAATCAAGGACGGTTTATAGTTTGCTCAAATATATTTTTCCAGCTGTTATATCAACAGCAATCCTCATAAGTCTCATTTCTTGGTGGAAAATCTGTCAAAAACGAAAAGCAACCATTCCACGGCCAGCGGAACAGTTAATAGCACCAGACCACATAATGATATCATATCATGATCTCTGTTTGGCTACTAATGACTTCTGTGAAAGCAACTTACTGGGAGTGGGGAGTTTCGGCTCTGTGTACAAGGGTGTGCTTTCTGATGGGGCAATTGTTGCTGTCAAGGTTCTAGATTTAAAAATGGAGGGTGCCATCAAAAGTTTTGATGCAGAGTGTAAGGTGTGGCGGACAATCCGGCACAGAAATGTTGTCAAGGTCATAACTACATGCTCAAGCCCTGACGTAAGAGCTCTGGTGCTGGAGTATATGTCCCATGGCAGCCTTGAGAAGTGGCTATACTCCCACAACTACTGTCTAAGTCTTCTGCAAAGAGTGAGTGTGTTGATTGATATTGCTTCTGCTTTGGAATATCTCCACCATGGTCAATCAGAAGTTGTGGTTCACTGTGATTTGAAGCCTAGCAATATTTTACTCGATGAAGACATGGTAGCACATGTGGCAGACTTTGGCCTCGGAAAAGTTTTAGCAGAAAACAAGGAGGAAACACAAACAAGAACTCTTGGCACACTTGGCTACATTGCACCAGAGTATGGTTCAGAAGGGAAAGTGTCTGCCAAGGGTGACATTTATAGTTTCGGAATTATGTTGTTTGAGATTCTCACAAGAAAGAAACCCACAGATGAACTGTTTTTTGGGGAACTGACTTTGAGACAATGGATAAATGTGTCGATTCCAGAAAGGGTGATTAAAGTGGTGGACAATGGTTTGTTAAGCATAGAAGGTGAAAGAGATATCAATTTCCTGGAGAGCATCGTTTTGCATATCATGGAGTTGGGCTTGGAGTGTACCTTAGAATTACCAGAAGAACGGGTCGACATAAAAGAAGTAGCGAGCAAGCTCAGCAAAATCAAATTGGCACTTTTTCATGACAGAACAGTCTGTGTTTGA

Protein Analysis

1119

Amino Acids

123.68

Weight (kDa)

7.53

Isoelectric Point (pI)

41.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 80 - 202 2.6e-09 Leucine-rich repeat region
LRR_8 PF13855 124 - 182 3.8e-07 Leucine rich repeat
LRR_14 PF23598 259 - 450 6.6e-08 Leucine-rich repeat region
LRR_8 PF13855 295 - 354 3.2e-06 Leucine rich repeat
LRR_8 PF13855 391 - 451 2.4e-06 Leucine rich repeat
LRR_14 PF23598 514 - 626 1.1e-06 Leucine-rich repeat region
LRR_8 PF13855 567 - 627 8.3e-07 Leucine rich repeat
LRR_14 PF23598 609 - 722 2.9e-08 Leucine-rich repeat region
LRR_8 PF13855 664 - 723 4.4e-10 Leucine rich repeat
Pkinase PF00069 834 - 1031 1.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 835 - 1043 8e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2160
AasI GACNNNNNNGTC 1 cut(s) 3347
AccB1I GGYRCC 4 cut(s) 266, 1017, 1512, 2600
AccB7I CCANNNNNTGG 2 cut(s) 2261, 3002
AccI GTMKAC 3 cut(s) 135, 607, 3285
AciI CCGC 2 cut(s) 2423, 2638
AclWI GGATC 2 cut(s) 1741, 2038
AcoI YGGCCR 1 cut(s) 2417
AcsI RAATTY 6 cut(s) 770, 1161, 1273, 1982, 2005, 2070
AcuI CTGAAG 2 cut(s) 980, 2191
AcyI GRCGYC 1 cut(s) 1018
AfaI GTAC 3 cut(s) 1821, 2537, 3259
AflIII ACRYGT 2 cut(s) 2019, 2905
AhdI GACNNNNNGTC 1 cut(s) 2198
AjnI CCWGG 3 cut(s) 1363, 1857, 3213
AjuI GAANNNNNNNTTGG 4 cut(s) 953, 985, 3087, 3119
AloI GAACNNNNNNTCC 4 cut(s) 403, 435, 1368, 1400
Alw21I GWGCWC 3 cut(s) 786, 2215, 2704
Alw26I GTCTC 9 cut(s) 110, 263, 626, 1030, 1190, 1881, 2272, 2372, 3115
Alw44I GTGCAC 1 cut(s) 2211
AlwI GGATC 2 cut(s) 1741, 2038
Ama87I CYCGRG 1 cut(s) 2170
AoxI GGCC 4 cut(s) 734, 1774, 2417, 2920
ApaLI GTGCAC 1 cut(s) 2211
ApeKI GCWGC 1 cut(s) 2730
ApoI RAATTY 6 cut(s) 770, 1161, 1273, 1982, 2005, 2070
ArsI GACNNNNNNTTYG 4 cut(s) 117, 149, 1510, 1542
Asp700I GAANNNNTTC 2 cut(s) 894, 1776
AspA2I CCTAGG 2 cut(s) 1705, 2285
AspLEI GCGC 1 cut(s) 1020
AspS9I GGNCC 5 cut(s) 168, 339, 820, 973, 2192
AsuHPI GGTGA 8 cut(s) 56, 791, 2063, 2244, 2262, 3044, 3166, 3206
AvaI CYCGRG 1 cut(s) 2170
AvaII GGWCC 5 cut(s) 168, 339, 820, 973, 2192
AvrII CCTAGG 2 cut(s) 1705, 2285
BaeGI GKGCMC 1 cut(s) 2215
BaeI ACNNNNGTAYC 2 cut(s) 2099, 2132
BanI GGYRCC 4 cut(s) 266, 1017, 1512, 2600
BanII GRGCYC 4 cut(s) 786, 1674, 2293, 2704
BarI GAAGNNNNNNTAC 2 cut(s) 2732, 2764
BauI CACGAG 1 cut(s) 1850
BbsI GAAGAC 4 cut(s) 651, 698, 2765, 2898
Bbv12I GWGCWC 3 cut(s) 786, 2215, 2704
BbvI GCAGC 1 cut(s) 2742
BccI CCATC 4 cut(s) 1543, 1615, 2549, 2612
BceAI ACGGC 1 cut(s) 2432
BciT130I CCWGG 3 cut(s) 1365, 1859, 3215
BcoDI GTCTC 9 cut(s) 110, 263, 626, 1030, 1190, 1881, 2272, 2372, 3115
BfaI CTAG 6 cut(s) 302, 1706, 2120, 2286, 2582, 2871
BfmI CTRYAG 4 cut(s) 492, 939, 1031, 2275
BfoI RGCGCY 1 cut(s) 1021
BglI GCCNNNNNGGC 1 cut(s) 921
BglII AGATCT 1 cut(s) 2077
BisI GCNGC 1 cut(s) 2731
BlnI CCTAGG 2 cut(s) 1705, 2285
BlpI GCTNAGC 1 cut(s) 3311
BlsI GCNGC 1 cut(s) 2732
Bme1390I CCNGG 3 cut(s) 1365, 1859, 3215
Bme18I GGWCC 5 cut(s) 168, 339, 820, 973, 2192
BmeRI GACNNNNNGTC 1 cut(s) 2198
BmeT110I CYCGRG 1 cut(s) 2170
BmgT120I GGNCC 5 cut(s) 168, 339, 820, 973, 2192
BmrFI CCNGG 3 cut(s) 1365, 1859, 3215
BmrI ACTGGG 1 cut(s) 2519
BmsI GCATC 5 cut(s) 794, 1461, 1623, 2608, 3231
BmuI ACTGGG 1 cut(s) 2519
BpiI GAAGAC 4 cut(s) 651, 698, 2765, 2898
BpmI CTGGAG 6 cut(s) 51, 405, 1233, 1386, 2732, 3236
Bpu1102I GCTNAGC 1 cut(s) 3311
BpuEI CTTGAG 4 cut(s) 2014, 2123, 2668, 2756
Bsa29I ATCGAT 1 cut(s) 802
BsaBI GATNNNNATC 1 cut(s) 1437
BsaHI GRCGYC 1 cut(s) 1018
BsaI GGTCTC 4 cut(s) 110, 263, 626, 1190
BsaXI ACNNNNNCTCC 8 cut(s) 403, 433, 1082, 1112, 1550, 1580, 2705, 2735
Bse1I ACTGG 8 cut(s) 170, 400, 566, 925, 1069, 1162, 1600, 2514
Bse3DI GCAATG 1 cut(s) 2988
Bse8I GATNNNNATC 1 cut(s) 1437
BseBI CCWGG 3 cut(s) 1365, 1859, 3215
BseCI ATCGAT 1 cut(s) 802
BseGI GGATG 1 cut(s) 1438
BseJI GATNNNNATC 1 cut(s) 1437
BseMI GCAATG 1 cut(s) 2988
BseMII CTCAG 4 cut(s) 1406, 1752, 2178, 3325
BseNI ACTGG 8 cut(s) 170, 400, 566, 925, 1069, 1162, 1600, 2514
BseRI GAGGAG 1 cut(s) 1781
BseSI GKGCMC 1 cut(s) 2215
BseXI GCAGC 1 cut(s) 2742
BseYI CCCAGC 1 cut(s) 1222
BsgI GTGCAG 1 cut(s) 29
BshFI GGCC 4 cut(s) 736, 1776, 2419, 2922
BshNI GGYRCC 4 cut(s) 266, 1017, 1512, 2600
BshVI ATCGAT 1 cut(s) 802
BsiHKAI GWGCWC 3 cut(s) 786, 2215, 2704
BsiHKCI CYCGRG 1 cut(s) 2170
BsiSI CCGG 1 cut(s) 2647
BslFI GGGAC 4 cut(s) 325, 2101, 2205, 2707
BsmAI GTCTC 9 cut(s) 110, 263, 626, 1030, 1190, 1881, 2272, 2372, 3115
BsmFI GGGAC 4 cut(s) 325, 2101, 2205, 2707
BsnI GGCC 4 cut(s) 736, 1776, 2419, 2922
Bso31I GGTCTC 4 cut(s) 110, 263, 626, 1190
BsoBI CYCGRG 1 cut(s) 2170
Bsp1286I GDGCHC 5 cut(s) 786, 1674, 2215, 2293, 2704
Bsp1407I TGTACA 1 cut(s) 2535
Bsp1720I GCTNAGC 1 cut(s) 3311
Bsp19I CCATGG 2 cut(s) 2725, 2830
BspACI CCGC 2 cut(s) 2423, 2638
BspANI GGCC 4 cut(s) 736, 1776, 2419, 2922
BspCNI CTCAG 4 cut(s) 1407, 1751, 2179, 3324
BspDI ATCGAT 1 cut(s) 802
BspHI TCATGA 3 cut(s) 709, 2464, 3337
BspMAI CTGCAG 2 cut(s) 1035, 2279
BspPI GGATC 2 cut(s) 1741, 2038
BspQI GCTCTTC 1 cut(s) 885
BspT107I GGYRCC 4 cut(s) 266, 1017, 1512, 2600
BspTNI GGTCTC 4 cut(s) 110, 263, 626, 1190
BsrDI GCAATG 1 cut(s) 2988
BsrGI TGTACA 1 cut(s) 2535
BsrI ACTGG 8 cut(s) 170, 400, 566, 925, 1069, 1162, 1600, 2514
BssNI GRCGYC 1 cut(s) 1018
BssSI CACGAG 1 cut(s) 1850
BssT1I CCWWGG 8 cut(s) 262, 1508, 1705, 1914, 2285, 2725, 2830, 3027
Bst2BI CACGAG 1 cut(s) 1850
Bst2UI CCWGG 3 cut(s) 1365, 1859, 3215
Bst6I CTCTTC 1 cut(s) 885
BstACI GRCGYC 1 cut(s) 1018
BstAPI GCANNNNNTGC 1 cut(s) 2567
BstAUI TGTACA 1 cut(s) 2535
BstC8I GCNNGC 5 cut(s) 221, 2293, 2421, 3304, 3308
BstDSI CCRYGG 3 cut(s) 2414, 2725, 2830
BstF5I GGATG 1 cut(s) 1438
BstH2I RGCGCY 1 cut(s) 1021
BstHHI GCGC 1 cut(s) 1020
BstMAI GTCTC 9 cut(s) 110, 263, 626, 1030, 1190, 1881, 2272, 2372, 3115
BstMWI GCNNNNNNNGC 7 cut(s) 921, 1223, 1255, 2567, 2909, 2982, 3312
BstNI CCWGG 3 cut(s) 1365, 1859, 3215
BstNSI RCATGY 3 cut(s) 2023, 2682, 2909
BstSCI CCNGG 3 cut(s) 1363, 1857, 3213
BstSFI CTRYAG 4 cut(s) 492, 939, 1031, 2275
BstSLI GKGCMC 1 cut(s) 2215
BstV1I GCAGC 1 cut(s) 2742
BstV2I GAAGAC 4 cut(s) 651, 698, 2765, 2898
BstX2I RGATCY 2 cut(s) 2030, 2077
BstXI CCANNNNNNTGG 2 cut(s) 869, 2048
BstYI RGATCY 2 cut(s) 2030, 2077
Bsu15I ATCGAT 1 cut(s) 802
BsuRI GGCC 4 cut(s) 736, 1776, 2419, 2922
BsuTUI ATCGAT 1 cut(s) 802
BtgI CCRYGG 3 cut(s) 2414, 2725, 2830
BtsCI GGATG 1 cut(s) 1438
BtsIMutI CAGTG 8 cut(s) 129, 171, 433, 781, 1412, 1960, 2215, 2854
Cac8I GCNNGC 5 cut(s) 221, 2293, 2421, 3304, 3308
CciI TCATGA 3 cut(s) 709, 2464, 3337
CfoI GCGC 1 cut(s) 1020
Cfr13I GGNCC 5 cut(s) 168, 339, 820, 973, 2192
ClaI ATCGAT 1 cut(s) 802
Csp6I GTAC 3 cut(s) 1820, 2536, 3258
CspCI CAANNNNNGTGG 2 cut(s) 757, 792
CviQI GTAC 3 cut(s) 1820, 2536, 3258
DinI GGCGCC 1 cut(s) 1019
DraI TTTAAA 2 cut(s) 2004, 2589
DrdI GACNNNNNNGTC 1 cut(s) 3347
DriI GACNNNNNGTC 1 cut(s) 2198
DseDI GACNNNNNNGTC 1 cut(s) 3347
EaeI YGGCCR 1 cut(s) 2417
Eam1104I CTCTTC 1 cut(s) 885
Eam1105I GACNNNNNGTC 1 cut(s) 2198
EarI CTCTTC 1 cut(s) 885
EciI GGCGGA 1 cut(s) 2653
Ecl136II GAGCTC 2 cut(s) 784, 2702
Eco130I CCWWGG 8 cut(s) 262, 1508, 1705, 1914, 2285, 2725, 2830, 3027
Eco147I AGGCCT 1 cut(s) 1776
Eco24I GRGCYC 4 cut(s) 786, 1674, 2293, 2704
Eco31I GGTCTC 4 cut(s) 110, 263, 626, 1190
Eco32I GATATC 2 cut(s) 2457, 3205
Eco47I GGWCC 5 cut(s) 168, 339, 820, 973, 2192
Eco53kI GAGCTC 2 cut(s) 784, 2702
Eco57I CTGAAG 2 cut(s) 980, 2191
Eco88I CYCGRG 1 cut(s) 2170
EcoICRI GAGCTC 2 cut(s) 784, 2702
EcoO109I RGGNCCY 2 cut(s) 339, 2192
EcoRII CCWGG 3 cut(s) 1363, 1857, 3213
EcoRV GATATC 2 cut(s) 2457, 3205
EcoT14I CCWWGG 8 cut(s) 262, 1508, 1705, 1914, 2285, 2725, 2830, 3027
EcoT22I ATGCAT 1 cut(s) 1638
EcoT38I GRGCYC 4 cut(s) 786, 1674, 2293, 2704
EgeI GGCGCC 1 cut(s) 1019
EheI GGCGCC 1 cut(s) 1019
ErhI CCWWGG 8 cut(s) 262, 1508, 1705, 1914, 2285, 2725, 2830, 3027
FaqI GGGAC 4 cut(s) 325, 2101, 2205, 2707
FblI GTMKAC 3 cut(s) 135, 607, 3285
Fnu4HI GCNGC 1 cut(s) 2731
FokI GGATG 1 cut(s) 1445
FriOI GRGCYC 4 cut(s) 786, 1674, 2293, 2704
Fsp4HI GCNGC 1 cut(s) 2731
FspBI CTAG 6 cut(s) 302, 1706, 2120, 2286, 2582, 2871
GlaI GCGC 1 cut(s) 1019
GluI GCNGC 1 cut(s) 2731
GsaI CCCAGC 1 cut(s) 1226
GsuI CTGGAG 6 cut(s) 51, 405, 1233, 1386, 2732, 3236
HaeII RGCGCY 1 cut(s) 1021
HaeIII GGCC 4 cut(s) 736, 1776, 2419, 2922
HapII CCGG 1 cut(s) 2647
HhaI GCGC 1 cut(s) 1020
Hin1I GRCGYC 1 cut(s) 1018
Hin6I GCGC 1 cut(s) 1018
HinP1I GCGC 1 cut(s) 1018
HincII GTYRAC 4 cut(s) 136, 397, 2203, 3286
HindII GTYRAC 4 cut(s) 136, 397, 2203, 3286
HindIII AAGCTT 5 cut(s) 242, 443, 515, 1247, 1990
HpaI GTTAAC 1 cut(s) 397
HpaII CCGG 1 cut(s) 2647
HphI GGTGA 8 cut(s) 56, 791, 2063, 2244, 2262, 3044, 3166, 3206
HpyCH4IV ACGT 1 cut(s) 2694
HpyF10VI GCNNNNNNNGC 7 cut(s) 921, 1223, 1255, 2567, 2909, 2982, 3312
HpySE526I ACGT 1 cut(s) 2694
Hsp92I GRCGYC 1 cut(s) 1018
HspAI GCGC 1 cut(s) 1018
KasI GGCGCC 1 cut(s) 1017
KflI GGGWCCC 1 cut(s) 339
KspAI GTTAAC 1 cut(s) 397
LguI GCTCTTC 1 cut(s) 885
LmnI GCTCC 3 cut(s) 789, 1214, 1286
Lsp1109I GCAGC 1 cut(s) 2742
LweI GCATC 5 cut(s) 794, 1461, 1623, 2608, 3231
MaeI CTAG 6 cut(s) 302, 1706, 2120, 2286, 2582, 2871
MaeII ACGT 1 cut(s) 2694
MaeIII GTNAC 8 cut(s) 39, 161, 229, 667, 944, 1526, 1655, 3032
MfeI CAATTG 3 cut(s) 1542, 1614, 2562
MflI RGATCY 2 cut(s) 2030, 2077
MhlI GDGCHC 5 cut(s) 786, 1674, 2215, 2293, 2704
Mly113I GGCGCC 1 cut(s) 1018
MlyI GAGTC 5 cut(s) 613, 1032, 1309, 1837, 2274
MmeI TCCRAC 2 cut(s) 384, 1991
Mph1103I ATGCAT 1 cut(s) 1638
MroXI GAANNNNTTC 2 cut(s) 894, 1776
MslI CAYNNNNRTG 2 cut(s) 2024, 2655
MspA1I CMGCKG 2 cut(s) 2339, 2423
MspI CCGG 1 cut(s) 2647
MspR9I CCNGG 3 cut(s) 1365, 1859, 3215
MunI CAATTG 3 cut(s) 1542, 1614, 2562
MvaI CCWGG 3 cut(s) 1365, 1859, 3215
MwoI GCNNNNNNNGC 7 cut(s) 921, 1223, 1255, 2567, 2909, 2982, 3312
NarI GGCGCC 1 cut(s) 1018
NcoI CCATGG 2 cut(s) 2725, 2830
NmuCI GTSAC 3 cut(s) 229, 1526, 3032
NsiI ATGCAT 1 cut(s) 1638
NspI RCATGY 3 cut(s) 2023, 2682, 2909
PagI TCATGA 3 cut(s) 709, 2464, 3337
PceI AGGCCT 1 cut(s) 1776
PciI ACATGT 2 cut(s) 2019, 2905
PciSI GCTCTTC 1 cut(s) 885
PcsI WCGNNNNNNNCGW 2 cut(s) 367, 1848
PdmI GAANNNNTTC 2 cut(s) 894, 1776
PfeI GAWTC 7 cut(s) 1318, 1383, 1463, 2179, 2281, 3067, 3142
PflMI CCANNNNNTGG 2 cut(s) 2261, 3002
PfoI TCCNGGA 2 cut(s) 1857, 3213
PkrI GCNGC 1 cut(s) 2732
PleI GAGTC 5 cut(s) 612, 1032, 1308, 1836, 2273
PluTI GGCGCC 1 cut(s) 1021
PpsI GAGTC 5 cut(s) 612, 1032, 1308, 1836, 2273
PpuMI RGGWCCY 2 cut(s) 339, 2192
PscI ACATGT 2 cut(s) 2019, 2905
PsiI TTATAA 1 cut(s) 2160
Psp124BI GAGCTC 2 cut(s) 786, 2704
Psp5II RGGWCCY 2 cut(s) 339, 2192
Psp6I CCWGG 3 cut(s) 1363, 1857, 3213
PspFI CCCAGC 1 cut(s) 1222
PspGI CCWGG 3 cut(s) 1363, 1857, 3213
PspPI GGNCC 5 cut(s) 168, 339, 820, 973, 2192
PspPPI RGGWCCY 2 cut(s) 339, 2192
PstI CTGCAG 2 cut(s) 1035, 2279
PsuI RGATCY 2 cut(s) 2030, 2077
PvuII CAGCTG 1 cut(s) 2339
RsaI GTAC 3 cut(s) 1821, 2537, 3259
RsaNI GTAC 3 cut(s) 1820, 2536, 3258
RseI CAYNNNNRTG 2 cut(s) 2024, 2655
SacI GAGCTC 2 cut(s) 786, 2704
SalI GTCGAC 2 cut(s) 134, 3284
SapI GCTCTTC 1 cut(s) 885
SatI GCNGC 1 cut(s) 2731
Sau96I GGNCC 5 cut(s) 168, 339, 820, 973, 2192
SbfI CCTGCAGG 1 cut(s) 2279
SchI GAGTC 5 cut(s) 613, 1032, 1309, 1837, 2274
ScrFI CCNGG 3 cut(s) 1365, 1859, 3215
SdaI CCTGCAGG 1 cut(s) 2279
SduI GDGCHC 5 cut(s) 786, 1674, 2215, 2293, 2704
SfaNI GCATC 5 cut(s) 794, 1461, 1623, 2608, 3231
SfcI CTRYAG 4 cut(s) 492, 939, 1031, 2275
SfoI GGCGCC 1 cut(s) 1019
SinI GGWCC 5 cut(s) 168, 339, 820, 973, 2192
SmiMI CAYNNNNRTG 2 cut(s) 2024, 2655
SmlI CTYRAG 4 cut(s) 1993, 2138, 2683, 2735
SmoI CTYRAG 4 cut(s) 1993, 2138, 2683, 2735
Sse8387I CCTGCAGG 1 cut(s) 2279
SseBI AGGCCT 1 cut(s) 1776
SsiI CCGC 2 cut(s) 2423, 2638
SspDI GGCGCC 1 cut(s) 1017
SspI AATATT 4 cut(s) 562, 742, 1177, 2878
SspMI CTAG 6 cut(s) 302, 1706, 2120, 2286, 2582, 2871
SstI GAGCTC 2 cut(s) 786, 2704
StuI AGGCCT 1 cut(s) 1776
StyD4I CCNGG 3 cut(s) 1363, 1857, 3213
StyI CCWWGG 8 cut(s) 262, 1508, 1705, 1914, 2285, 2725, 2830, 3027
TaiI ACGT 1 cut(s) 2697
TatI WGTACW 1 cut(s) 2535
TfiI GAWTC 7 cut(s) 1318, 1383, 1463, 2179, 2281, 3067, 3142
TscAI CASTG 8 cut(s) 136, 178, 440, 781, 1419, 1960, 2215, 2861
TseFI GTSAC 3 cut(s) 229, 1526, 3032
TseI GCWGC 1 cut(s) 2730
Tsp45I GTSAC 3 cut(s) 229, 1526, 3032
TspRI CASTG 8 cut(s) 136, 178, 440, 781, 1419, 1960, 2215, 2861
Van91I CCANNNNNTGG 2 cut(s) 2261, 3002
VneI GTGCAC 1 cut(s) 2211
VpaK11BI GGWCC 5 cut(s) 168, 339, 820, 973, 2192
XapI RAATTY 6 cut(s) 770, 1161, 1273, 1982, 2005, 2070
XbaI TCTAGA 1 cut(s) 2581
XceI RCATGY 3 cut(s) 2023, 2682, 2909
XcmI CCANNNNNNNNNTGG 2 cut(s) 151, 1830
XmaJI CCTAGG 2 cut(s) 1705, 2285
XmiI GTMKAC 3 cut(s) 135, 607, 3285
XmnI GAANNNNTTC 2 cut(s) 894, 1776
XspI CTAG 6 cut(s) 302, 1706, 2120, 2286, 2582, 2871
Zsp2I ATGCAT 1 cut(s) 1638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.