Rw4G009440

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
Physical Location & Seq
Forward (+)
21205377 .. 21209142
3766 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G009440.1

Sequence Viewer

Length: 3321 bp
ATGCTAATCCCATTTGTACTACTCGTGTTACTTCACCACTCATTCTTCCTTCACCCAGCCACTACCACCTCCACCTCCAACTTCACCGATCAATCTGCTCTCCTTGCCATTCAATCCAAACTCACATTTGATCCTACCGAAACTGTTTTGGGTGGTAATTGGAGTACCAACACAAGCTTCTGTGATTGGATTGGGGTCTCATGCAGTAAACGAAGGCAAAGAGTCACCGCCTTGGACTTGTCATCTATGGGTCTTGAAGGCACCATTGCACCTCATGTTGGCAACCTCTCCTTTCTGGTCATATTGGTTCTTCAATACAACAGCTTCTCTGGGATTGTGCCAAATGAAATCAGCCATTTACACCGCTTGAAGGTACTTGTACTGGAAGCGAACCGGTTGGAGGGGCACATCCCTCCAACTTTATATCATTGCCAAAAGCTCGAAATCATAGCCCTTGCAGAAAACAAGCTTACCGGTCGTATACCTGAAGAGTTGGGTTTCTTACCCAAACTTCAGAAATTATATCTCGGTTTAAACAATCTCACGGCTGGCGAAATTCCAGCATCTTTGGGGAACGTTTCAACATTACAAGAATTGAGTGTGCCTAAAAGTGGCCTCACAGGTTCACTCCCTTCCACCCTACTTAACCTATCTTCTCTAGTTGTTATTTCACTATATACAAATAACATTTCAGGAGTTCTTCCTGAGGATCTTTGCCATTACTGGCCTAATATTCAACACATTGCTTTATCTGGAAACAAGCTTGGCGGCCAGCTCTCTTCGAGATTTAATCAATGCAGTAACATTGAGGTGTTATCTCTGTCATACAATAGGTTTGTTGGAACTATTCCAAAAGACCTTGCAAGTTTACAGCATCTTGAATTGCTCTACCTCGGTGGTAATGGCTTAATCGGTACTGTACCGCCGGTCCTAGGTAACTTGTCGAACTTGCAAAAGTTTGCTGTGGAGCGTAATAACATCAAAGGAAGTATTCCCAGAGAGTTGGGCCTTCTTTCTAATTTACTTGACCTTTCATTAGCTATCAATAGCCTAACAGGTGCAATACCTCCAGAAATTTTCAACATCACCTCCTTACAATCTTTGTCAGTACGTAATAATTCCCTTTCTGGGGCATTTCCTTCATATTCTGGAGTAGTTCTTCCTAACCTCGAATTCCTATACTGTGAAAACAATAAGATTACTGGACTTGTCCCATCCTTTTTTTCAAACCTTACTAAGCTGAATGAGTTAGCACTCAGTACCAATTTACTCTATGGACCGATTCCCATGGATCTTGGTAGCCTAAAACACCTCCAGTTCCTTGATTTGGCAAGAAATCAGTTGACTGGAGAACCTGGAGTTCCTGAACTTAAATTCCTTTCCTCATTATTCAATTCCACTTCGCTGCGAGAGTTGGTTCTGACTGAAAATCCTCTAAATGGCATCATACCCAATTCCTTTGGAAATGTTTCTTCCCTTCAGCACATTTCAGCAATTTCGTGCCAGATAAAGGGTCACATTCCCACAAAAATTCATTCCTTGAAAAGTTTAATCTACCTTAAATTTGTGGACAACAATATAAGTGGAAAAATACCACCACAGATTGGAGGACTGGAGAGGTTACAAAGGTTGTATCTGAGCTTTAACAGAATTGAAGGATCCATTCCATATGAGATCTGTCATCTGCAGAACCTTGGAGAACTATCACTAGAGAATAACAAAATCTCTGGATTGATCCCAAATTGCATTGGAAACCTCAGCCGCACCCTTCAAATATTTCTCCTAAATTCCAACCAAATGACATCCTTGATACCAATGAATTTATGGAACTTGGAAAATCTCTTGGTGTTAAATTTGTCATCCAATTCTTTCAGTGGAGACATACCTACCACTTTGACAAAGTCGATTTCCATTGAAGTGATTGATTTATCTTATAACCAAATTACTGGTAATATTTCAAGCATCATAGCAGCATTCCAAAGCCTAGCTTACCTTGATTTGTCAAAGAACTGGTTTATAGGATCCATTCCACCGAGCTGTGGTGATCTGAAAGGGTTAGAGTATCTGGACCTATCATACAATAACCTGTCTGGTGCAATACCAAAGTCTCTTGAAACTCTCAAATTTCTCGAGTATTTGAATCTCTCTTTCAATGATCTCTTTGGAGAGATTCCTTCTGGTGGACCTTTTGTAAACTTTAGTTCCCGATCATTTTTGGAGAATAAAGCACTTTGTGGGAGACCAAAGTATGGAGTTCCACCTTGTATGACTCAAAAATCAAAGACGACACATCCTGTGCTCACATATGTTCTTCCTAGCATTGCATCGACAGTGATTCTGATAGCCCTCATTTATATGATCACATGGTATAGAAAAAGAAAGAGAGGCAAGAGTACAACAGTTGAACAGCTAACAACAGTGGAGCATAGTAGGATATCATATCAAGAACTCCGTCGCGCTACAAATGACTTTTGTGAAAGCAACTTTCTTGGAGGGGGAAGTTTTGGCTCGGTGTACAAGGGGATACTGTCTAATGGGACTACTATTGCTGTCAAAATTCTTAAGCTGGAAATGGAGGGTGCTGTAAAAAGTTTTGATGCAGAATGCAAGGTGTGGCGAACAATCCGTCATAGGAATCTTGTAAAGATTATAACTACATGTTCCAGCCCTGAGGTCACAGCTTTGGTGCTGCAGTACATGTCTAATGGCAGTCTTGAGAAGTGGTTATACTCTCACAACTACTGTCTCAGTATTCTGCAAAGAGTGAGCATGTTGATCGATATTGCATCTGCTTTGGAATATCTCCATCATGGTCAAGCAGAAGCAGTGGTGCACTGTGATGTGAAGCCTGGGAATATCCTTCTTGATGAAGACATGGTTGCACATGTTGCAGACTTCGGTCTTGCAAAAATTTTAGCAAAATACAAAGAGGAAACACAGACAAGAACCATCGGCACTCTGGGCTACGTAGCACCAGAGTATGGTTCCGCAGGAAAAGTGTCCAAAAAGGGTGATGTCTATAGCTTTGGGATAATGCTGCTGGAAATAATGGCGAGAAAGAAACCCACTGATGAAATGTTTGCCGGAGAAGTTACTTTGAGGCAATGGATAAATGTCTCTATCCCTGATAATGTTCTGGAAGTGGTGGATGCTGGCTTATTGAGCATAGAAGAGGGACGAGACATGAATGCCACAGAAAGTATCCTAGTGTCCATCCTCGAAATAGGCTTGACATGTTCGGAAGAAGTAGCAGAGGATAGAATGGACATTAAGGATGTGGTGCCCAAGCTCAAGAAAATAAAATTGGCACTACAACATTGA

Protein Analysis

1106

Amino Acids

121.58

Weight (kDa)

6.69

Isoelectric Point (pI)

37.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 122 - 181 5e-07 Leucine rich repeat
LRR_8 PF13855 388 - 448 1.1e-07 Leucine rich repeat
LRR_14 PF23598 507 - 636 1.4e-09 Leucine-rich repeat region
LRR_8 PF13855 661 - 720 4.5e-10 Leucine rich repeat
Pkinase PF00069 828 - 1024 3.5e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 829 - 1096 6.2e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1935, 2651
AccB1I GGYRCC 2 cut(s) 260, 3280
AccB7I CCANNNNNTGG 3 cut(s) 1604, 2249, 2981
AccI GTMKAC 1 cut(s) 481
AccII CGCG 1 cut(s) 2457
AciI CCGC 6 cut(s) 228, 364, 768, 923, 1762, 2988
AclI AACGTT 1 cut(s) 576
AclWI GGATC 8 cut(s) 125, 717, 1299, 1653, 1666, 1729, 2016, 2029
AcoI YGGCCR 1 cut(s) 769
AcuI CTGAAG 3 cut(s) 497, 507, 1463
AdeI CACNNNGTG 1 cut(s) 2234
AflII CTTAAG 1 cut(s) 2561
AflIII ACRYGT 4 cut(s) 2657, 2697, 2884, 3233
AgeI ACCGGT 2 cut(s) 393, 473
AjnI CCWGG 2 cut(s) 1354, 2848
AjuI GAANNNNNNNTTGG 4 cut(s) 161, 193, 3287, 3319
AloI GAACNNNNNNTCC 2 cut(s) 1359, 1391
Alw21I GWGCWC 2 cut(s) 2301, 2835
Alw26I GTCTC 7 cut(s) 202, 1872, 2112, 2233, 2750, 3121, 3174
Alw44I GTGCAC 1 cut(s) 2831
AlwI GGATC 8 cut(s) 125, 717, 1299, 1653, 1666, 1729, 2016, 2029
Ama87I CYCGRG 1 cut(s) 2129
AoxI GGCC 4 cut(s) 613, 725, 769, 1006
ApaLI GTGCAC 1 cut(s) 2831
ApeKI GCWGC 4 cut(s) 1405, 1970, 2689, 3037
ArsI GACNNNNNNTTYG 2 cut(s) 2611, 2643
AsiGI ACCGGT 2 cut(s) 393, 473
Asp700I GAANNNNTTC 1 cut(s) 1468
AspA2I CCTAGG 1 cut(s) 931
AspLEI GCGC 1 cut(s) 2459
AspS9I GGNCC 5 cut(s) 928, 1006, 1277, 2068, 2183
AsuHPI GGTGA 7 cut(s) 26, 44, 76, 217, 1078, 2054, 3023
AvaI CYCGRG 1 cut(s) 2129
AvaII GGWCC 4 cut(s) 928, 1277, 2068, 2183
AvrII CCTAGG 1 cut(s) 931
AxyI CCTNAGG 2 cut(s) 705, 2670
BaeGI GKGCMC 3 cut(s) 408, 2835, 3285
BamHI GGATCC 2 cut(s) 1658, 2021
BanI GGYRCC 2 cut(s) 260, 3280
BarI GAAGNNNNNNTAC 2 cut(s) 2711, 2743
BauI CACGAG 1 cut(s) 23
BbsI GAAGAC 1 cut(s) 2877
Bbv12I GWGCWC 2 cut(s) 2301, 2835
BbvCI CCTCAGC 1 cut(s) 1757
BbvI GCAGC 4 cut(s) 1392, 1982, 2676, 3024
BccI CCATC 4 cut(s) 1222, 2814, 2957, 3221
BceAI ACGGC 1 cut(s) 561
BcgI CGANNNNNNTGC 4 cut(s) 77, 111, 2758, 2792
BciT130I CCWGG 2 cut(s) 1356, 2850
BciVI GTATCC 2 cut(s) 2517, 3212
BclI TGATCA 1 cut(s) 2358
BcoDI GTCTC 7 cut(s) 202, 1872, 2112, 2233, 2750, 3121, 3174
BfaI CTAG 6 cut(s) 659, 932, 1709, 1985, 2316, 3206
BfmI CTRYAG 3 cut(s) 1685, 2690, 3019
BfrI CTTAAG 1 cut(s) 2561
BfuI GTATCC 2 cut(s) 2517, 3212
BglII AGATCT 1 cut(s) 1674
BisI GCNGC 6 cut(s) 769, 1406, 1762, 1971, 2690, 3038
BlnI CCTAGG 1 cut(s) 931
BlsI GCNGC 6 cut(s) 770, 1407, 1763, 1972, 2691, 3039
Bme1390I CCNGG 2 cut(s) 1356, 2850
Bme18I GGWCC 4 cut(s) 928, 1277, 2068, 2183
BmeT110I CYCGRG 1 cut(s) 2129
BmgT120I GGNCC 5 cut(s) 928, 1006, 1277, 2068, 2183
BmiI GGNNCC 5 cut(s) 262, 1660, 2023, 2986, 3282
BmrFI CCNGG 2 cut(s) 1356, 2850
BmsI GCATC 8 cut(s) 572, 883, 1452, 1971, 2333, 2587, 2795, 3139
BoxI GACNNNNGTC 1 cut(s) 2898
BpiI GAAGAC 1 cut(s) 2877
BpmI CTGGAG 6 cut(s) 1053, 1170, 1298, 1368, 1377, 1634
Bpu10I CCTNAGC 1 cut(s) 1757
BpuEI CTTGAG 2 cut(s) 2735, 3275
Bsa29I ATCGAT 1 cut(s) 2778
BsaAI YACGTR 2 cut(s) 1112, 2968
BsaI GGTCTC 2 cut(s) 202, 2233
BsaJI CCNNGG 6 cut(s) 231, 892, 931, 1287, 1693, 2849
BsaWI WCCGGW 2 cut(s) 393, 473
BsaXI ACNNNNNCTCC 2 cut(s) 1073, 1103
Bse118I RCCGGY 3 cut(s) 393, 473, 925
Bse1I ACTGG 8 cut(s) 387, 728, 1207, 1315, 1351, 1617, 1951, 2015
Bse21I CCTNAGG 2 cut(s) 705, 2670
Bse3DI GCAATG 5 cut(s) 264, 427, 741, 2319, 3110
BseBI CCWGG 2 cut(s) 1356, 2850
BseCI ATCGAT 1 cut(s) 2778
BseDI CCNNGG 6 cut(s) 231, 892, 931, 1287, 1693, 2849
BseGI GGATG 8 cut(s) 408, 1214, 1802, 1859, 2290, 3154, 3213, 3280
BseMI GCAATG 5 cut(s) 264, 427, 741, 2319, 3110
BseMII CTCAG 6 cut(s) 696, 1270, 1628, 1771, 2661, 2761
BseNI ACTGG 8 cut(s) 387, 728, 1207, 1315, 1351, 1617, 1951, 2015
BseSI GKGCMC 3 cut(s) 408, 2835, 3285
BseXI GCAGC 4 cut(s) 1392, 1982, 2676, 3024
BseYI CCCAGC 1 cut(s) 55
Bsh1236I CGCG 1 cut(s) 2457
Bsh1285I CGRYCG 1 cut(s) 478
BshFI GGCC 4 cut(s) 615, 727, 771, 1008
BshNI GGYRCC 2 cut(s) 260, 3280
BshTI ACCGGT 2 cut(s) 393, 473
BshVI ATCGAT 1 cut(s) 2778
BsiEI CGRYCG 1 cut(s) 478
BsiHKAI GWGCWC 2 cut(s) 2301, 2835
BsiHKCI CYCGRG 1 cut(s) 2129
BsiSI CCGG 4 cut(s) 394, 474, 926, 3084
BslFI GGGAC 3 cut(s) 1196, 2551, 3189
BsmAI GTCTC 7 cut(s) 202, 1872, 2112, 2233, 2750, 3121, 3174
BsmFI GGGAC 3 cut(s) 1196, 2551, 3189
BsmI GAATGC 3 cut(s) 1973, 2609, 3193
BsnI GGCC 4 cut(s) 615, 727, 771, 1008
Bso31I GGTCTC 2 cut(s) 202, 2233
BsoBI CYCGRG 1 cut(s) 2129
Bsp1286I GDGCHC 4 cut(s) 408, 2301, 2835, 3285
Bsp1407I TGTACA 1 cut(s) 2514
Bsp19I CCATGG 1 cut(s) 1287
BspACI CCGC 6 cut(s) 228, 364, 768, 923, 1762, 2988
BspANI GGCC 4 cut(s) 615, 727, 771, 1008
BspCNI CTCAG 6 cut(s) 697, 1269, 1629, 1770, 2662, 2760
BspDI ATCGAT 1 cut(s) 2778
BspFNI CGCG 1 cut(s) 2457
BspLI GGNNCC 5 cut(s) 262, 1660, 2023, 2986, 3282
BspMAI CTGCAG 2 cut(s) 1689, 2694
BspPI GGATC 8 cut(s) 125, 717, 1299, 1653, 1666, 1729, 2016, 2029
BspT107I GGYRCC 2 cut(s) 260, 3280
BspTI CTTAAG 1 cut(s) 2561
BspTNI GGTCTC 2 cut(s) 202, 2233
BsrDI GCAATG 5 cut(s) 264, 427, 741, 2319, 3110
BsrFI RCCGGY 3 cut(s) 393, 473, 925
BsrGI TGTACA 1 cut(s) 2514
BsrI ACTGG 8 cut(s) 387, 728, 1207, 1315, 1351, 1617, 1951, 2015
BssAI RCCGGY 3 cut(s) 393, 473, 925
BssECI CCNNGG 6 cut(s) 231, 892, 931, 1287, 1693, 2849
BssNAI GTATAC 1 cut(s) 482
BssSI CACGAG 1 cut(s) 23
BssT1I CCWWGG 4 cut(s) 231, 931, 1287, 1693
Bst1107I GTATAC 1 cut(s) 482
Bst2BI CACGAG 1 cut(s) 23
Bst2UI CCWGG 2 cut(s) 1356, 2850
Bst4CI ACNGT 9 cut(s) 145, 919, 1184, 2332, 2401, 2419, 2529, 2744, 2837
Bst6I CTCTTC 3 cut(s) 483, 784, 3165
BstAFI CTTAAG 1 cut(s) 2561
BstAPI GCANNNNNTGC 1 cut(s) 2888
BstAUI TGTACA 1 cut(s) 2514
BstBAI YACGTR 2 cut(s) 1112, 2968
BstC8I GCNNGC 3 cut(s) 550, 773, 3154
BstDEI CTNAG 7 cut(s) 705, 1236, 1256, 1637, 1757, 2670, 2747
BstDSI CCRYGG 1 cut(s) 1287
BstF5I GGATG 8 cut(s) 408, 1214, 1802, 1859, 2290, 3154, 3213, 3280
BstFNI CGCG 1 cut(s) 2457
BstHHI GCGC 1 cut(s) 2459
BstMAI GTCTC 7 cut(s) 202, 1872, 2112, 2233, 2750, 3121, 3174
BstMCI CGRYCG 1 cut(s) 478
BstMWI GCNNNNNNNGC 4 cut(s) 104, 2888, 2961, 3162
BstNI CCWGG 2 cut(s) 1356, 2850
BstNSI RCATGY 5 cut(s) 2661, 2701, 2773, 2888, 3237
BstPAI GACNNNNGTC 1 cut(s) 2898
BstSCI CCNGG 2 cut(s) 1354, 2848
BstSFI CTRYAG 3 cut(s) 1685, 2690, 3019
BstSLI GKGCMC 3 cut(s) 408, 2835, 3285
BstSNI TACGTA 2 cut(s) 1112, 2968
BstUI CGCG 1 cut(s) 2457
BstV1I GCAGC 4 cut(s) 1392, 1982, 2676, 3024
BstV2I GAAGAC 1 cut(s) 2877
BstX2I RGATCY 5 cut(s) 709, 1291, 1658, 1674, 2021
BstXI CCANNNNNNTGG 2 cut(s) 1003, 1946
BstYI RGATCY 5 cut(s) 709, 1291, 1658, 1674, 2021
BstZ17I GTATAC 1 cut(s) 482
Bsu15I ATCGAT 1 cut(s) 2778
Bsu36I CCTNAGG 2 cut(s) 705, 2670
BsuI GTATCC 2 cut(s) 2517, 3212
BsuRI GGCC 4 cut(s) 615, 727, 771, 1008
BsuTUI ATCGAT 1 cut(s) 2778
BtgI CCRYGG 1 cut(s) 1287
BtsCI GGATG 8 cut(s) 408, 1214, 1802, 1859, 2290, 3154, 3213, 3280
BtsI GCAGTG 1 cut(s) 2832
BtsIMutI CAGTG 6 cut(s) 1879, 2337, 2424, 2832, 2833, 3066
Cac8I GCNNGC 3 cut(s) 550, 773, 3154
CfoI GCGC 1 cut(s) 2459
Cfr10I RCCGGY 3 cut(s) 393, 473, 925
Cfr13I GGNCC 5 cut(s) 928, 1006, 1277, 2068, 2183
ClaI ATCGAT 1 cut(s) 2778
CspAI ACCGGT 2 cut(s) 393, 473
CspCI CAANNNNNGTGG 2 cut(s) 1564, 1599
DdeI CTNAG 7 cut(s) 705, 1236, 1256, 1637, 1757, 2670, 2747
DraI TTTAAA 1 cut(s) 534
DraIII CACNNNGTG 1 cut(s) 2234
EaeI YGGCCR 1 cut(s) 769
Eam1104I CTCTTC 3 cut(s) 483, 784, 3165
EarI CTCTTC 3 cut(s) 483, 784, 3165
Eco105I TACGTA 2 cut(s) 1112, 2968
Eco130I CCWWGG 4 cut(s) 231, 931, 1287, 1693
Eco31I GGTCTC 2 cut(s) 202, 2233
Eco32I GATATC 1 cut(s) 2436
Eco47I GGWCC 4 cut(s) 928, 1277, 2068, 2183
Eco57I CTGAAG 3 cut(s) 497, 507, 1463
Eco81I CCTNAGG 2 cut(s) 705, 2670
Eco88I CYCGRG 1 cut(s) 2129
EcoRI GAATTC 1 cut(s) 1172
EcoRII CCWGG 2 cut(s) 1354, 2848
EcoRV GATATC 1 cut(s) 2436
EcoT14I CCWWGG 4 cut(s) 231, 931, 1287, 1693
ErhI CCWWGG 4 cut(s) 231, 931, 1287, 1693
FalI AAGNNNNNCTT 2 cut(s) 1972, 2004
FaqI GGGAC 3 cut(s) 1196, 2551, 3189
FauNDI CATATG 2 cut(s) 1669, 2305
FbaI TGATCA 1 cut(s) 2358
FblI GTMKAC 1 cut(s) 481
Fnu4HI GCNGC 6 cut(s) 769, 1406, 1762, 1971, 2690, 3038
FokI GGATG 8 cut(s) 395, 1201, 1789, 1846, 2277, 3161, 3200, 3287
Fsp4HI GCNGC 6 cut(s) 769, 1406, 1762, 1971, 2690, 3038
FspBI CTAG 6 cut(s) 659, 932, 1709, 1985, 2316, 3206
GlaI GCGC 1 cut(s) 2458
GluI GCNGC 6 cut(s) 769, 1406, 1762, 1971, 2690, 3038
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 6 cut(s) 1053, 1170, 1298, 1368, 1377, 1634
HaeIII GGCC 4 cut(s) 615, 727, 771, 1008
HapII CCGG 4 cut(s) 394, 474, 926, 3084
HhaI GCGC 1 cut(s) 2459
Hin6I GCGC 1 cut(s) 2457
HinP1I GCGC 1 cut(s) 2457
HincII GTYRAC 1 cut(s) 1344
HindII GTYRAC 1 cut(s) 1344
HindIII AAGCTT 3 cut(s) 175, 467, 761
HinfI GANTC 7 cut(s) 222, 1282, 2140, 2170, 2269, 2335, 2635
HpaII CCGG 4 cut(s) 394, 474, 926, 3084
HphI GGTGA 7 cut(s) 26, 44, 76, 217, 1078, 2054, 3023
Hpy188I TCNGA 6 cut(s) 516, 1422, 1638, 2049, 2340, 3241
Hpy99I CGWCG 1 cut(s) 2457
HpyCH4III ACNGT 9 cut(s) 145, 919, 1184, 2332, 2401, 2419, 2529, 2744, 2837
HpyCH4IV ACGT 3 cut(s) 576, 1111, 2967
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 2888, 2961, 3162
HpyF3I CTNAG 7 cut(s) 705, 1236, 1256, 1637, 1757, 2670, 2747
HpySE526I ACGT 3 cut(s) 576, 1111, 2967
HspAI GCGC 1 cut(s) 2457
Ksp22I TGATCA 1 cut(s) 2358
LmnI GCTCC 2 cut(s) 967, 2422
Lsp1109I GCAGC 4 cut(s) 1392, 1982, 2676, 3024
LweI GCATC 8 cut(s) 572, 883, 1452, 1971, 2333, 2587, 2795, 3139
MaeI CTAG 6 cut(s) 659, 932, 1709, 1985, 2316, 3206
MaeII ACGT 3 cut(s) 576, 1111, 2967
MaeIII GTNAC 8 cut(s) 27, 223, 800, 935, 1514, 1620, 2674, 3091
MflI RGATCY 5 cut(s) 709, 1291, 1658, 1674, 2021
MhlI GDGCHC 4 cut(s) 408, 2301, 2835, 3285
MlyI GAGTC 2 cut(s) 231, 2263
MmeI TCCRAC 5 cut(s) 102, 378, 440, 820, 1815
MroXI GAANNNNTTC 1 cut(s) 1468
MslI CAYNNNNRTG 4 cut(s) 809, 1916, 2354, 2838
MspCI CTTAAG 1 cut(s) 2561
MspI CCGG 4 cut(s) 394, 474, 926, 3084
MspR9I CCNGG 2 cut(s) 1356, 2850
MssI GTTTAAAC 1 cut(s) 534
Mva1269I GAATGC 3 cut(s) 1973, 2609, 3193
MvaI CCWGG 2 cut(s) 1356, 2850
MvnI CGCG 1 cut(s) 2457
MwoI GCNNNNNNNGC 4 cut(s) 104, 2888, 2961, 3162
NcoI CCATGG 1 cut(s) 1287
NdeI CATATG 2 cut(s) 1669, 2305
NlaIV GGNNCC 5 cut(s) 262, 1660, 2023, 2986, 3282
NmuCI GTSAC 3 cut(s) 223, 1514, 2674
NspI RCATGY 5 cut(s) 2661, 2701, 2773, 2888, 3237
PaeR7I CTCGAG 1 cut(s) 2129
PciI ACATGT 4 cut(s) 2657, 2697, 2884, 3233
PctI GAATGC 3 cut(s) 1973, 2609, 3193
PdmI GAANNNNTTC 1 cut(s) 1468
PfeI GAWTC 5 cut(s) 1282, 2140, 2170, 2335, 2635
PflFI GACNNNGTC 1 cut(s) 1900
PflMI CCANNNNNTGG 3 cut(s) 1604, 2249, 2981
PinAI ACCGGT 2 cut(s) 393, 473
PkrI GCNGC 6 cut(s) 770, 1407, 1763, 1972, 2691, 3039
PleI GAGTC 2 cut(s) 230, 2263
PmeI GTTTAAAC 1 cut(s) 534
PpsI GAGTC 2 cut(s) 230, 2263
Ppu21I YACGTR 2 cut(s) 1112, 2968
PscI ACATGT 4 cut(s) 2657, 2697, 2884, 3233
PshAI GACNNNNGTC 1 cut(s) 2898
PsiI TTATAA 2 cut(s) 1935, 2651
Psp1406I AACGTT 1 cut(s) 576
Psp6I CCWGG 2 cut(s) 1354, 2848
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 2 cut(s) 1354, 2848
PspN4I GGNNCC 5 cut(s) 262, 1660, 2023, 2986, 3282
PspPI GGNCC 5 cut(s) 928, 1006, 1277, 2068, 2183
PstI CTGCAG 2 cut(s) 1689, 2694
PsuI RGATCY 5 cut(s) 709, 1291, 1658, 1674, 2021
PsyI GACNNNGTC 1 cut(s) 1900
RseI CAYNNNNRTG 4 cut(s) 809, 1916, 2354, 2838
SatI GCNGC 6 cut(s) 769, 1406, 1762, 1971, 2690, 3038
Sau96I GGNCC 5 cut(s) 928, 1006, 1277, 2068, 2183
SchI GAGTC 2 cut(s) 231, 2263
ScrFI CCNGG 2 cut(s) 1356, 2850
SduI GDGCHC 4 cut(s) 408, 2301, 2835, 3285
SfaNI GCATC 8 cut(s) 572, 883, 1452, 1971, 2333, 2587, 2795, 3139
SfcI CTRYAG 3 cut(s) 1685, 2690, 3019
Sfr274I CTCGAG 1 cut(s) 2129
SinI GGWCC 4 cut(s) 928, 1277, 2068, 2183
SlaI CTCGAG 1 cut(s) 2129
SmiMI CAYNNNNRTG 4 cut(s) 809, 1916, 2354, 2838
SmlI CTYRAG 4 cut(s) 2129, 2561, 2714, 3290
SmoI CTYRAG 4 cut(s) 2129, 2561, 2714, 3290
SnaBI TACGTA 2 cut(s) 1112, 2968
SsiI CCGC 6 cut(s) 228, 364, 768, 923, 1762, 2988
SspI AATATT 3 cut(s) 733, 1776, 1954
SspMI CTAG 6 cut(s) 659, 932, 1709, 1985, 2316, 3206
StyD4I CCNGG 2 cut(s) 1354, 2848
StyI CCWWGG 4 cut(s) 231, 931, 1287, 1693
TaaI ACNGT 9 cut(s) 145, 919, 1184, 2332, 2401, 2419, 2529, 2744, 2837
TaiI ACGT 3 cut(s) 579, 1114, 2970
TaqI TCGA 9 cut(s) 441, 782, 944, 1170, 1904, 2130, 2327, 2778, 3219
TaqII GACCGA 2 cut(s) 1294, 2888
TatI WGTACW 5 cut(s) 16, 379, 2393, 2514, 2694
TauI GCSGC 2 cut(s) 771, 1764
TfiI GAWTC 5 cut(s) 1282, 2140, 2170, 2335, 2635
TscAI CASTG 6 cut(s) 1879, 2337, 2424, 2832, 2840, 3073
TseFI GTSAC 3 cut(s) 223, 1514, 2674
TseI GCWGC 4 cut(s) 1405, 1970, 2689, 3037
Tsp45I GTSAC 3 cut(s) 223, 1514, 2674
TspDTI ATGAA 8 cut(s) 360, 1023, 1131, 1523, 1832, 2883, 3087, 3200
TspGWI ACGGA 2 cut(s) 2441, 2615
TspRI CASTG 6 cut(s) 1879, 2337, 2424, 2832, 2840, 3073
Tth111I GACNNNGTC 1 cut(s) 1900
Van91I CCANNNNNTGG 3 cut(s) 1604, 2249, 2981
Vha464I CTTAAG 1 cut(s) 2561
VneI GTGCAC 1 cut(s) 2831
VpaK11BI GGWCC 4 cut(s) 928, 1277, 2068, 2183
XceI RCATGY 5 cut(s) 2661, 2701, 2773, 2888, 3237
XcmI CCANNNNNNNNNTGG 2 cut(s) 1821, 2956
XhoI CTCGAG 1 cut(s) 2129
XmaJI CCTAGG 1 cut(s) 931
XmiI GTMKAC 1 cut(s) 481
XmnI GAANNNNTTC 1 cut(s) 1468
XspI CTAG 6 cut(s) 659, 932, 1709, 1985, 2316, 3206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.