RchiOBHm_Chr2g0113661

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
25812869 .. 25816646
3778 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48700

Sequence Viewer

Length: 1869 bp
ATGAAGACAGTTACTTGGTTCTTCCTGATATACTTGATCTGTTGTGAGGCGGCTAGCTGCTTAACTATGGCAGCACAAACCAACCTTAACATCACCACAGACCGGTATGCTCCTCTTGCTCTCAAAGCCTGTATCACCAATGACCCTCAAAACATAGTCTTCACCAACTGGTCAACCACAACCCCTGTTTGTAACTGGGTTGGAGTCACTTATGGTGCAAGCCATCATCGAATCGCAGAGTTGAACGTATCTTACTTTGGTCTCACATGCACCATTCCTTGGGAACTAGGCAACTTATCTTTTCTTGTTGTTCTGGACTTCAAAAATAATAGTTTTCATGGTATCTTGCCTCAAGAATTGGCTTGCCTGCGTCGGTTGAAGTTTATAAGCTTGAGAAACAACAGGTTCATGGGAGTCATTCCATCATGGTTTGGCTCCTTATTCAAACTTCAAGTATTCAATTTGTTTGGTAATCAATTTTCAGGTTCCATACCAGCTACAATCTTCAACTTATCTGCTCTGCAAAAAATTGATCTGAGTTATAACCAACTCTCAGTTGGAATGTGTGTTGATTTTTTAGAAATTCCAAATGAGATCGGCACTTTGAATCATCTGGAAAAATTGTTTGTGCAATACAATGTCTTAAAAGGGCCTATCCCTATGACTATCTTCAACATGTCATCTTTGATTACTGTAACTTTCTATGGTAACAATTTGACTGGTAGAATTCCTGACAATATTTGTCAAAATCTTTCTAATATTCAAGAGTTGAATTTGGGTGCCAATCAGTTTAATGGTCCACTTCCTTCCATATTTGGGCAATGCAAACAACTTCTTCAATTAAACTTGAAGCTTAACAGCTTGACAGGTCCTATACCATATGGGAATCAACTCTCTGGTTCTGTACCTTCCTGCTTGGAGTTTATTGAAGGCCCTATTCCTAGTTCCTTTGCTACCTGCTTAAGCTTAGAACTGTTGAATTTATCTCAGAACAGTCTCTCTGGTGTGATTCCAAAGTCTCTTGAAGCACTCTCATATCTCAAGTACTTAAATTTGTCTTTCAACAGACTCCAAGGAGAAATTCCAAGCGGTGGTCCTTTCATAAACTTCTCTGCTGAATCATTTGTTTCAAACCATGGACTCTGTGGTGGATCCCAATTTCAAGTTCCACCATGCAAAAGAAAAACTAGCATAACTATCTTGAAAAAAAAGAATGCAACAGCTGCAGCACATATTATCTTGATGCCTCAAGTTTTACGCAGAAGGGTTTCATACCAAGAGCTCCTATGTGCGACAGATGGATTCAATGAAAGCAACTTACTTGGTATTGGGGGTTTTGGCTCAGTATATAAAGGAACATTTCCAGATGAGACAGATGTTGCAATAAAGGTTTTCAATTTGGATTTAGAAGGGGCATTTGCAAGTTTTGAGGTTGAATGTGAAATGCTAAGTAATGTTCATCACAGAAATCTTGTCAAAGTCATCAGTTGTTGTAGTCAAATTGATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGCCATGAGAAGTGGTTGTATTCTCAGAGTTCTTCTTTGGACTTAGTGCAGAGCAACATCTTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGTATTGCGAGACTCTTGGGTGGAGGAGATTCTATGACTCAAACCATGACCCTGGCCACAATTGGGTATATTGCTCCAGAGTATGGAATGGAAGGAATAGTGACCAGAAGAGGGGATGTGTATAGTTTCGGTATTGTAGTGATGGAAACATTTACAAGAAGGAAACCAACTGATGAGATCTTCATTGGGGAAATGAGATTAAGTCAATGGGAACCCTGCCTCACCTAG

Protein Analysis

622

Amino Acids

68.83

Weight (kDa)

6.09

Isoelectric Point (pI)

35.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 86 - 186 1.1e-06 Leucine-rich repeat region
LRR_8 PF13855 130 - 184 1.7e-07 Leucine rich repeat
LRR_8 PF13855 314 - 357 2.2e-07 Leucine rich repeat
Pkinase PF00069 436 - 521 3.9e-09 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 439 - 528 6.1e-11 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 528 - 602 2.4e-12 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 528 - 605 9e-11 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 386, 543
Acc36I ACCTGC 1 cut(s) 965
AccB1I GGYRCC 1 cut(s) 779
AccB7I CCANNNNNTGG 3 cut(s) 279, 1091, 1724
AciI CCGC 2 cut(s) 50, 1089
AclWI GGATC 2 cut(s) 1146, 1159
AcoI YGGCCR 1 cut(s) 1695
AcsI RAATTY 6 cut(s) 582, 726, 772, 979, 1051, 1080
AfaI GTAC 2 cut(s) 906, 1046
AfiI CCNNNNNNNGG 7 cut(s) 102, 279, 816, 1091, 1704, 1724, 1752
AflII CTTAAG 1 cut(s) 961
AflIII ACRYGT 2 cut(s) 675, 1627
AgeI ACCGGT 1 cut(s) 102
AjnI CCWGG 1 cut(s) 1692
AjuI GAANNNNNNNTTGG 4 cut(s) 1065, 1097, 1149, 1181
AluBI AGCT 8 cut(s) 57, 390, 497, 853, 861, 966, 1223, 1282
AluI AGCT 8 cut(s) 57, 390, 497, 853, 861, 966, 1223, 1282
Alw21I GWGCWC 1 cut(s) 1284
Alw26I GTCTC 5 cut(s) 266, 1001, 1023, 1364, 1645
AlwI GGATC 2 cut(s) 1146, 1159
AoxI GGCC 3 cut(s) 650, 931, 1695
ApeKI GCWGC 4 cut(s) 57, 71, 1223, 1226
ApoI RAATTY 6 cut(s) 582, 726, 772, 979, 1051, 1080
AsiGI ACCGGT 1 cut(s) 102
Asp700I GAANNNNTTC 1 cut(s) 1267
AspS9I GGNCC 5 cut(s) 650, 797, 869, 932, 1094
AsuHPI GGTGA 4 cut(s) 85, 127, 154, 1855
AsuNHI GCTAGC 1 cut(s) 53
AvaII GGWCC 3 cut(s) 797, 869, 1094
BalI TGGCCA 1 cut(s) 1697
BamHI GGATCC 1 cut(s) 1151
BanI GGYRCC 1 cut(s) 779
BanII GRGCYC 1 cut(s) 1284
BbsI GAAGAC 2 cut(s) 11, 151
Bbv12I GWGCWC 1 cut(s) 1284
BbvI GCAGC 4 cut(s) 44, 83, 1210, 1238
BccI CCATC 4 cut(s) 231, 430, 1292, 1777
BciT130I CCWGG 1 cut(s) 1694
BcoDI GTCTC 5 cut(s) 266, 1001, 1023, 1364, 1645
BfaI CTAG 6 cut(s) 54, 287, 942, 1188, 1607, 1867
BfmI CTRYAG 1 cut(s) 1224
BfrI CTTAAG 1 cut(s) 961
BfuAI ACCTGC 1 cut(s) 965
BglII AGATCT 1 cut(s) 1818
BisI GCNGC 5 cut(s) 51, 58, 72, 1224, 1227
BlsI GCNGC 5 cut(s) 52, 59, 73, 1225, 1228
BmcAI AGTACT 1 cut(s) 1046
Bme1390I CCNGG 1 cut(s) 1694
Bme18I GGWCC 3 cut(s) 797, 869, 1094
BmgT120I GGNCC 5 cut(s) 650, 797, 869, 932, 1094
BmiI GGNNCC 6 cut(s) 436, 487, 781, 1153, 1544, 1854
BmrFI CCNGG 1 cut(s) 1694
BmrI ACTGGG 1 cut(s) 205
BmsI GCATC 1 cut(s) 1233
BmtI GCTAGC 1 cut(s) 57
BmuI ACTGGG 1 cut(s) 205
BpiI GAAGAC 2 cut(s) 11, 151
BpmI CTGGAG 1 cut(s) 1701
BpuEI CTTGAG 4 cut(s) 336, 412, 1025, 1233
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 4 cut(s) 278, 1072, 1135, 1692
BsaWI WCCGGW 1 cut(s) 102
Bsc4I CCNNNNNNNGG 7 cut(s) 102, 279, 816, 1091, 1704, 1724, 1752
Bse118I RCCGGY 1 cut(s) 102
Bse1I ACTGG 3 cut(s) 173, 200, 724
Bse3DI GCAATG 1 cut(s) 827
BseBI CCWGG 1 cut(s) 1694
BseDI CCNNGG 4 cut(s) 278, 1072, 1135, 1692
BseGI GGATG 1 cut(s) 1762
BseLI CCNNNNNNNGG 7 cut(s) 102, 279, 816, 1091, 1704, 1724, 1752
BseMI GCAATG 1 cut(s) 827
BseMII CTCAG 5 cut(s) 527, 567, 1001, 1356, 1580
BseNI ACTGG 3 cut(s) 173, 200, 724
BseRI GAGGAG 2 cut(s) 102, 1680
BseXI GCAGC 4 cut(s) 44, 83, 1210, 1238
BsgI GTGCAG 1 cut(s) 1610
BshFI GGCC 3 cut(s) 652, 933, 1697
BshNI GGYRCC 1 cut(s) 779
BshTI ACCGGT 1 cut(s) 102
BsiHKAI GWGCWC 1 cut(s) 1284
BsiSI CCGG 1 cut(s) 103
BslI CCNNNNNNNGG 7 cut(s) 102, 279, 816, 1091, 1704, 1724, 1752
BsmAI GTCTC 5 cut(s) 266, 1001, 1023, 1364, 1645
BsmI GAATGC 1 cut(s) 1219
BsnI GGCC 3 cut(s) 652, 933, 1697
Bso31I GGTCTC 1 cut(s) 266
Bsp1286I GDGCHC 1 cut(s) 1284
Bsp143I GATC 5 cut(s) 36, 532, 594, 1151, 1818
Bsp19I CCATGG 1 cut(s) 1135
BspACI CCGC 2 cut(s) 50, 1089
BspANI GGCC 3 cut(s) 652, 933, 1697
BspCNI CTCAG 5 cut(s) 528, 566, 1000, 1355, 1579
BspLI GGNNCC 6 cut(s) 436, 487, 781, 1153, 1544, 1854
BspMAI CTGCAG 1 cut(s) 1228
BspMI ACCTGC 1 cut(s) 965
BspOI GCTAGC 1 cut(s) 57
BspPI GGATC 2 cut(s) 1146, 1159
BspT107I GGYRCC 1 cut(s) 779
BspTI CTTAAG 1 cut(s) 961
BspTNI GGTCTC 1 cut(s) 266
BsrDI GCAATG 1 cut(s) 827
BsrFI RCCGGY 1 cut(s) 102
BsrI ACTGG 3 cut(s) 173, 200, 724
BssAI RCCGGY 1 cut(s) 102
BssECI CCNNGG 4 cut(s) 278, 1072, 1135, 1692
BssMI GATC 5 cut(s) 36, 532, 594, 1151, 1818
BssT1I CCWWGG 3 cut(s) 278, 1072, 1135
Bst2UI CCWGG 1 cut(s) 1694
Bst4CI ACNGT 4 cut(s) 10, 694, 975, 995
Bst6I CTCTTC 1 cut(s) 1744
BstAFI CTTAAG 1 cut(s) 961
BstAPI GCANNNNNTGC 2 cut(s) 1223, 1631
BstC8I GCNNGC 4 cut(s) 55, 220, 364, 368
BstDEI CTNAG 8 cut(s) 536, 553, 967, 987, 1342, 1448, 1566, 1585
BstDSI CCRYGG 1 cut(s) 1135
BstF5I GGATG 1 cut(s) 1762
BstKTI GATC 5 cut(s) 39, 535, 597, 1154, 1821
BstMAI GTCTC 5 cut(s) 266, 1001, 1023, 1364, 1645
BstMBI GATC 5 cut(s) 36, 532, 594, 1151, 1818
BstMWI GCNNNNNNNGC 4 cut(s) 116, 125, 1223, 1631
BstNI CCWGG 1 cut(s) 1694
BstNSI RCATGY 4 cut(s) 270, 679, 1534, 1631
BstSCI CCNGG 1 cut(s) 1692
BstSFI CTRYAG 1 cut(s) 1224
BstV1I GCAGC 4 cut(s) 44, 83, 1210, 1238
BstV2I GAAGAC 2 cut(s) 11, 151
BstX2I RGATCY 2 cut(s) 1151, 1818
BstXI CCANNNNNNTGG 1 cut(s) 1693
BstYI RGATCY 2 cut(s) 1151, 1818
BsuRI GGCC 3 cut(s) 652, 933, 1697
BtgI CCRYGG 1 cut(s) 1135
BtsCI GGATG 1 cut(s) 1762
BveI ACCTGC 1 cut(s) 965
Cac8I GCNNGC 4 cut(s) 55, 220, 364, 368
Cfr10I RCCGGY 1 cut(s) 102
Cfr13I GGNCC 5 cut(s) 650, 797, 869, 932, 1094
CseI GACGC 1 cut(s) 359
Csp6I GTAC 2 cut(s) 905, 1045
CspAI ACCGGT 1 cut(s) 102
CviQI GTAC 2 cut(s) 905, 1045
DdeI CTNAG 8 cut(s) 536, 553, 967, 987, 1342, 1448, 1566, 1585
DpnI GATC 5 cut(s) 38, 534, 596, 1153, 1820
DpnII GATC 5 cut(s) 36, 532, 594, 1151, 1818
EaeI YGGCCR 1 cut(s) 1695
Eam1104I CTCTTC 1 cut(s) 1744
EarI CTCTTC 1 cut(s) 1744
Ecl136II GAGCTC 1 cut(s) 1282
Eco130I CCWWGG 3 cut(s) 278, 1072, 1135
Eco24I GRGCYC 1 cut(s) 1284
Eco31I GGTCTC 1 cut(s) 266
Eco47I GGWCC 3 cut(s) 797, 869, 1094
Eco53kI GAGCTC 1 cut(s) 1282
EcoICRI GAGCTC 1 cut(s) 1282
EcoO109I RGGNCCY 3 cut(s) 650, 869, 932
EcoRI GAATTC 1 cut(s) 726
EcoRII CCWGG 1 cut(s) 1692
EcoT14I CCWWGG 3 cut(s) 278, 1072, 1135
EcoT38I GRGCYC 1 cut(s) 1284
ErhI CCWWGG 3 cut(s) 278, 1072, 1135
FauNDI CATATG 1 cut(s) 880
Fnu4HI GCNGC 5 cut(s) 51, 58, 72, 1224, 1227
FokI GGATG 1 cut(s) 1769
FriOI GRGCYC 1 cut(s) 1284
Fsp4HI GCNGC 5 cut(s) 51, 58, 72, 1224, 1227
FspBI CTAG 6 cut(s) 54, 287, 942, 1188, 1607, 1867
GluI GCNGC 5 cut(s) 51, 58, 72, 1224, 1227
GsuI CTGGAG 1 cut(s) 1701
HaeIII GGCC 3 cut(s) 652, 933, 1697
HapII CCGG 1 cut(s) 103
HgaI GACGC 1 cut(s) 359
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HindIII AAGCTT 3 cut(s) 388, 851, 964
HpaII CCGG 1 cut(s) 103
HphI GGTGA 4 cut(s) 85, 127, 154, 1855
Hpy166II GTNNAC 2 cut(s) 174, 800
Hpy188I TCNGA 3 cut(s) 537, 990, 1569
Hpy8I GTNNAC 2 cut(s) 174, 800
Hpy99I CGWCG 1 cut(s) 375
HpyAV CCTTC 7 cut(s) 816, 918, 923, 1257, 1403, 1727, 1794
HpyCH4III ACNGT 4 cut(s) 10, 694, 975, 995
HpyCH4IV ACGT 1 cut(s) 246
HpyF10VI GCNNNNNNNGC 4 cut(s) 116, 125, 1223, 1631
HpyF3I CTNAG 8 cut(s) 536, 553, 967, 987, 1342, 1448, 1566, 1585
HpySE526I ACGT 1 cut(s) 246
Kzo9I GATC 5 cut(s) 36, 532, 594, 1151, 1818
LmnI GCTCC 5 cut(s) 115, 440, 1287, 1542, 1720
Lsp1109I GCAGC 4 cut(s) 44, 83, 1210, 1238
LweI GCATC 1 cut(s) 1233
MaeI CTAG 6 cut(s) 54, 287, 942, 1188, 1607, 1867
MaeII ACGT 1 cut(s) 246
MaeIII GTNAC 6 cut(s) 10, 191, 205, 694, 707, 1741
MalI GATC 5 cut(s) 38, 534, 596, 1153, 1820
MboI GATC 5 cut(s) 36, 532, 594, 1151, 1818
MboII GAAGA 9 cut(s) 13, 16, 151, 496, 661, 827, 1566, 1761, 1813
MfeI CAATTG 1 cut(s) 1701
MflI RGATCY 2 cut(s) 1151, 1818
MhlI GDGCHC 1 cut(s) 1284
MlsI TGGCCA 1 cut(s) 1697
MluNI TGGCCA 1 cut(s) 1697
MlyI GAGTC 6 cut(s) 213, 423, 1062, 1134, 1647, 1672
MmeI TCCRAC 2 cut(s) 181, 538
MnlI CCTC 8 cut(s) 40, 123, 156, 360, 1257, 1423, 1658, 1745
Mox20I TGGCCA 1 cut(s) 1697
MroXI GAANNNNTTC 1 cut(s) 1267
MscI TGGCCA 1 cut(s) 1697
MseI TTAA 9 cut(s) 62, 87, 644, 792, 842, 855, 962, 1049, 1841
Msp20I TGGCCA 1 cut(s) 1697
MspA1I CMGCKG 1 cut(s) 1223
MspCI CTTAAG 1 cut(s) 961
MspI CCGG 1 cut(s) 103
MspR9I CCNGG 1 cut(s) 1694
MunI CAATTG 1 cut(s) 1701
Mva1269I GAATGC 1 cut(s) 1219
MvaI CCWGG 1 cut(s) 1694
MwoI GCNNNNNNNGC 4 cut(s) 116, 125, 1223, 1631
NcoI CCATGG 1 cut(s) 1135
NdeI CATATG 1 cut(s) 880
NdeII GATC 5 cut(s) 36, 532, 594, 1151, 1818
NheI GCTAGC 1 cut(s) 53
NlaIV GGNNCC 6 cut(s) 436, 487, 781, 1153, 1544, 1854
NmuCI GTSAC 2 cut(s) 205, 1741
NspI RCATGY 4 cut(s) 270, 679, 1534, 1631
PciI ACATGT 2 cut(s) 675, 1627
PctI GAATGC 1 cut(s) 1219
PdmI GAANNNNTTC 1 cut(s) 1267
PfeI GAWTC 7 cut(s) 231, 607, 886, 1009, 1118, 1302, 1670
PflMI CCANNNNNTGG 3 cut(s) 279, 1091, 1724
PinAI ACCGGT 1 cut(s) 102
PkrI GCNGC 5 cut(s) 52, 59, 73, 1225, 1228
PleI GAGTC 6 cut(s) 212, 422, 1062, 1134, 1647, 1672
PpsI GAGTC 6 cut(s) 212, 422, 1062, 1134, 1647, 1672
PpuMI RGGWCCY 1 cut(s) 869
PscI ACATGT 2 cut(s) 675, 1627
PsiI TTATAA 2 cut(s) 386, 543
Psp124BI GAGCTC 1 cut(s) 1284
Psp5II RGGWCCY 1 cut(s) 869
Psp6I CCWGG 1 cut(s) 1692
PspGI CCWGG 1 cut(s) 1692
PspN4I GGNNCC 6 cut(s) 436, 487, 781, 1153, 1544, 1854
PspPI GGNCC 5 cut(s) 650, 797, 869, 932, 1094
PspPPI RGGWCCY 1 cut(s) 869
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstI CTGCAG 1 cut(s) 1228
PsuI RGATCY 2 cut(s) 1151, 1818
PvuII CAGCTG 1 cut(s) 1223
RsaI GTAC 2 cut(s) 906, 1046
RsaNI GTAC 2 cut(s) 905, 1045
SacI GAGCTC 1 cut(s) 1284
SaqAI TTAA 9 cut(s) 62, 87, 644, 792, 842, 855, 962, 1049, 1841
SatI GCNGC 5 cut(s) 51, 58, 72, 1224, 1227
Sau3AI GATC 5 cut(s) 36, 532, 594, 1151, 1818
Sau96I GGNCC 5 cut(s) 650, 797, 869, 932, 1094
ScaI AGTACT 1 cut(s) 1046
SchI GAGTC 6 cut(s) 213, 423, 1062, 1134, 1647, 1672
ScrFI CCNGG 1 cut(s) 1694
SduI GDGCHC 1 cut(s) 1284
SfaNI GCATC 1 cut(s) 1233
SfcI CTRYAG 1 cut(s) 1224
SinI GGWCC 3 cut(s) 797, 869, 1094
SmlI CTYRAG 5 cut(s) 351, 391, 961, 1040, 1248
SmoI CTYRAG 5 cut(s) 351, 391, 961, 1040, 1248
SsiI CCGC 2 cut(s) 50, 1089
SspI AATATT 2 cut(s) 739, 760
SspMI CTAG 6 cut(s) 54, 287, 942, 1188, 1607, 1867
SstI GAGCTC 1 cut(s) 1284
StyD4I CCNGG 1 cut(s) 1692
StyI CCWWGG 3 cut(s) 278, 1072, 1135
TaaI ACNGT 4 cut(s) 10, 694, 975, 995
TaiI ACGT 1 cut(s) 249
TaqI TCGA 1 cut(s) 229
TatI WGTACW 1 cut(s) 1044
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 7 cut(s) 231, 607, 886, 1009, 1118, 1302, 1670
Tru1I TTAA 9 cut(s) 62, 87, 644, 792, 842, 855, 962, 1049, 1841
Tru9I TTAA 9 cut(s) 62, 87, 644, 792, 842, 855, 962, 1049, 1841
TseFI GTSAC 2 cut(s) 205, 1741
TseI GCWGC 4 cut(s) 57, 71, 1223, 1226
Tsp45I GTSAC 2 cut(s) 205, 1741
TspDTI ATGAA 8 cut(s) 17, 326, 397, 1090, 1260, 1323, 1448, 1813
Van91I CCANNNNNTGG 3 cut(s) 279, 1091, 1724
Vha464I CTTAAG 1 cut(s) 961
VpaK11BI GGWCC 3 cut(s) 797, 869, 1094
XapI RAATTY 6 cut(s) 582, 726, 772, 979, 1051, 1080
XceI RCATGY 4 cut(s) 270, 679, 1534, 1631
XcmI CCANNNNNNNNNTGG 2 cut(s) 554, 1142
XmnI GAANNNNTTC 1 cut(s) 1267
XspI CTAG 6 cut(s) 54, 287, 942, 1188, 1607, 1867
ZrmI AGTACT 1 cut(s) 1046
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.