Rh4DG110900

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000058
Physical Location & Seq
Forward (+)
17321912 .. 17325785
3874 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG110900.1

Sequence Viewer

Length: 2973 bp
ATGCCGGTGTTTTCTAGTTTGACGATGAGAACCTTTCCAGAAGGCTTCCTAGAATTCTTCCTGGCAAGAACGATTCTTGACACTGAGCTAAGTGGTCGAATACCTATAGAGTTGGGTTTCTTACCCAAGCTTCGGAAACTATATCTTGGTGTAAACAATTTTGTGGCTGGTAATATTCCAGTATCTCTGGGCAACATTTCAACATTACAAGAATTGAGTCTACCCGAAAGTGGTCTCACAGGTTCATTCCCTCACACTCTACTTAACCTGTCTTCTCTGGTTACTATATCTCTGTATAAAAATAACATTTCTGGAAGTCTTCATGATGTGGACATCTGCCATTATTGGCCTAATATTCAAATCCTTCAATTTGCTAACAACAAATTCAGTGGTGAGCTCCCTTCCAGAATTGATCGATGCAGAGAGATTGTGGTCCTTTCTTTCTCAAATAATAGGCTTATCGGAAGTATTCCCCAATATATTGGGGCTTTACAAAATCTTGAAGAGCTTCATCTTGATTTCAATAGCCTAACTGGCTTTATACCTCCCACTATAGGTAACTTGTCGAACCTGAAGCAATTTTTGGTCCAAAATAATAACATTACAGGAGGTATTCCGAAGGATTTGGGGCGCCTTTCTAATCTGCAGAGACTCGTTTTGGCTAACAATAGCCTAACTGGTGCAATACCCTTTGATATTTTCAACATTTCCTCCTTACAGATTTTCTCAACAGCATTTAATTCCCTTTCTGGAACTTTTCCTTCATCAACTGGAATTTTACTTCCTAATATTGAAGGTCTCTATCTTTCTGCCAATCAATTTGCTGGAGCTATCCCAGCATACTTTTCTAATTTTTCCAAGCTTCATTTGCTTGATCTTAGCCAAAATTTACTTTATGGAGCAATACCCATGAGTCTTGGTAGCATAAAGAATCTCCAAATCCTTAATTTGGGCAGAAATCAATTAAGTGGGGAACCTGGAGTTCTTGAACTTAGATTCCTTTCTTCTATATTCAATAGCAGTTCACTGAGGGTTTTGGCTTTGGATGACAATCCTCTCAATGGCATCATGCCTGATTCTTTTAGAAATCAATCTTATTCCTTCCAGAACATTTATGCCCCAAGGTGCCAAATCAAAGGTCACATACCATCATCAATTGGTTTTTTGAAAAACTTGACCTCCCTTGTCTTGTTGAACAACAATATGACTGGAAATCTTCCATCATCAATTGGGCGATTGGAGATGATGCATAGATTGTATCTTGATAGTAACAATATCGAAGGGCTCATTCCAGATGAGCTTTGTCTTTTGAGGAACCTAGGAGAGCTATTACTATCAAATAACAACTTCTCAGGAGTGATCCCAAGTTGTATAGCAAACCTTGAAGGCCTTCAAAAAGTCCTCCTCAATTCCAATAGACTGACATCAACCGTACCAATGAGTCTATGGAACCTCGAAAATCTCGTGTTCCTGGATTTGTCATTCAATTCTCTTAGTGGAGACTTACCTTCAAGCATGAGAAAGACCAAGGTTCTTCAAATGGTCGATTTATCCTCAAATCAAATCAGTGGAAACATTCCAACTGTTATTGGCGAATTTCAAAGCTTGAGTTCTTTAAATTTGTCAAACAACATGTTTGTGGGATCTGTTCCCCAAAGTTTTGGTGATCTAAAAGGATTGGAAATTTTAGATCTATCATACAACACCTTGTCAGGCACGATACCCAAGTCCCTAGAAACGCTCAAATACCTCAAGTATTTGAACTTGTCTTATAACAAGCTCTCGGGAGAGATTCCTTCTGAGGGACCTTTTGTCAACTTCAGTGCACAATCATTCTTGGGAAATATGGCACTTTGTCAGAGATCACCAAACTTTGGAGTCTCACCCTGCAGGAATCCTAGGGCTCGCAAATCAAGGACGGTTTATAGTTTGCTCAAATATATTTTTCCAGCTGTTATATCAACAGCAATCCTCATAAGTCTCATTTCTTGGTGGAAAATCTGTCAAAAACGAAAAGCAACCATTCCACGGCCAGCGGAACAGTTAATAGCACCAGACCACATAATGATATCATATCATGATCTCTGTTTGGCTACTAATGACTTCTGTGAAAGCAACTTACTGGGAGTGGGGAGTTTCGGCTCTGTGTACAAGGGTGTGCTTTCTGATGGGGCAATTGTTGCTGTCAAGGTTCTAGATTTAAAAATGGAGGGTGCCATCAAAAGTTTTGATGCAGAGTGTAAGGTGTGGCGGACAATCCGGCACAGAAATGTTGTCAAGGTCATAACTACATGCTCAAGCCCTGACGTAAGAGCTCTGGTGCTGGAGTATATGTCCCATGGCAGCCTTGAGAAGTGGCTATACTCCCACAACTACTGTCTAAGTCTTCTGCAAAGAGTGAGTGTGTTGATTGATATTGCTTCTGCTTTGGAATATCTCCACCATGGTCAATCAGAAGTTGTGGTTCACTGTGATTTGAAGCCTAGCAATATTTTACTCGATGAAGACATGGTAGCACATGTGGCAGACTTTGGCCTCGGAAAAGTTTTAGCAGAAAACAAGGAGGAAACACAAACAAGAACTCTTGGCACACTTGGCTACATTGCACCAGAGTATGGTTCAGAAGGGAAAGTGTCTGCCAAGGGTGACATTTATAGTTTCGGAATTATGTTGTTTGAGATTCTCACAAGAAAGAAACCCACAGATGAACTGTTTTTTGGGGAACTGACTTTGAGACAATGGATAAATGTGTCGATTCCAGAAAGGGTGATTAAAGTGGTGGACAATGGTTTGTTAAGCATAGAAGGTGAAAGAGATATCAATTTCCTGGAGAGCATCGTTTTGCATATCATGGAGTTGGGCTTGGAGTGTACCTTAGAATTACCAGAAGAACGGGTCGACATAAAAGAAGTAGCGAGCAAGCTCAGCAAAATCAAATTGGCACTTTTTCATGACAGAACAGTCTGTGTTTGA

Protein Analysis

990

Amino Acids

109.52

Weight (kDa)

6.35

Isoelectric Point (pI)

40.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 166 - 225 2.6e-06 Leucine rich repeat
LRR_8 PF13855 262 - 322 2.1e-06 Leucine rich repeat
LRR_14 PF23598 385 - 496 1.6e-06 Leucine-rich repeat region
LRR_8 PF13855 438 - 498 7.1e-07 Leucine rich repeat
LRR_14 PF23598 481 - 594 2.1e-08 Leucine-rich repeat region
LRR_8 PF13855 535 - 594 3.6e-10 Leucine rich repeat
Pkinase PF00069 705 - 902 1.4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 706 - 914 6.5e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1773
AasI GACNNNNNNGTC 1 cut(s) 2960
AccB1I GGYRCC 3 cut(s) 630, 1125, 2213
AccB7I CCANNNNNTGG 2 cut(s) 1874, 2615
AccI GTMKAC 2 cut(s) 220, 2898
AciI CCGC 2 cut(s) 2036, 2251
AclWI GGATC 2 cut(s) 1354, 1651
AcoI YGGCCR 1 cut(s) 2030
AcsI RAATTY 7 cut(s) 53, 383, 774, 886, 1595, 1618, 1683
AcuI CTGAAG 2 cut(s) 593, 1804
AcyI GRCGYC 1 cut(s) 631
AfaI GTAC 3 cut(s) 1434, 2150, 2872
AfiI CCNNNNNNNGG 9 cut(s) 132, 230, 554, 949, 1061, 1802, 1874, 2028, 2615
AflIII ACRYGT 2 cut(s) 1632, 2518
AhdI GACNNNNNGTC 1 cut(s) 1811
AjnI CCWGG 4 cut(s) 60, 976, 1470, 2826
AjuI GAANNNNNNNTTGG 4 cut(s) 566, 598, 2700, 2732
AloI GAACNNNNNNTCC 2 cut(s) 981, 1013
Alw21I GWGCWC 3 cut(s) 399, 1828, 2317
Alw26I GTCTC 7 cut(s) 239, 643, 803, 1494, 1885, 1985, 2728
Alw44I GTGCAC 1 cut(s) 1824
AlwI GGATC 2 cut(s) 1354, 1651
Ama87I CYCGRG 1 cut(s) 1783
AoxI GGCC 4 cut(s) 347, 1387, 2030, 2533
ApaLI GTGCAC 1 cut(s) 1824
ApeKI GCWGC 1 cut(s) 2343
ApoI RAATTY 7 cut(s) 53, 383, 774, 886, 1595, 1618, 1683
ArsI GACNNNNNNTTYG 2 cut(s) 1123, 1155
Asp700I GAANNNNTTC 2 cut(s) 507, 1389
AspA2I CCTAGG 2 cut(s) 1318, 1898
AspLEI GCGC 1 cut(s) 633
AspS9I GGNCC 3 cut(s) 433, 586, 1805
AsuHPI GGTGA 7 cut(s) 404, 1676, 1857, 1875, 2657, 2779, 2819
AvaI CYCGRG 1 cut(s) 1783
AvaII GGWCC 3 cut(s) 433, 586, 1805
AvrII CCTAGG 2 cut(s) 1318, 1898
BaeGI GKGCMC 1 cut(s) 1828
BaeI ACNNNNGTAYC 2 cut(s) 1712, 1745
BanI GGYRCC 3 cut(s) 630, 1125, 2213
BanII GRGCYC 4 cut(s) 399, 1287, 1906, 2317
BarI GAAGNNNNNNTAC 2 cut(s) 2345, 2377
BauI CACGAG 1 cut(s) 1463
BbsI GAAGAC 4 cut(s) 264, 311, 2378, 2511
Bbv12I GWGCWC 3 cut(s) 399, 1828, 2317
BbvI GCAGC 1 cut(s) 2355
BccI CCATC 4 cut(s) 1156, 1228, 2162, 2225
BceAI ACGGC 1 cut(s) 2045
BciT130I CCWGG 4 cut(s) 62, 978, 1472, 2828
BcoDI GTCTC 7 cut(s) 239, 643, 803, 1494, 1885, 1985, 2728
BfaI CTAG 7 cut(s) 15, 50, 1319, 1733, 1899, 2195, 2484
BfmI CTRYAG 4 cut(s) 105, 552, 644, 1888
BfoI RGCGCY 1 cut(s) 634
BglI GCCNNNNNGGC 1 cut(s) 534
BglII AGATCT 1 cut(s) 1690
BisI GCNGC 1 cut(s) 2344
BlnI CCTAGG 2 cut(s) 1318, 1898
BlpI GCTNAGC 1 cut(s) 2924
BlsI GCNGC 1 cut(s) 2345
Bme1390I CCNGG 4 cut(s) 62, 978, 1472, 2828
Bme18I GGWCC 3 cut(s) 433, 586, 1805
BmeRI GACNNNNNGTC 1 cut(s) 1811
BmeT110I CYCGRG 1 cut(s) 1783
BmgT120I GGNCC 3 cut(s) 433, 586, 1805
BmiI GGNNCC 7 cut(s) 632, 975, 1127, 1316, 1451, 1806, 2215
BmrFI CCNGG 4 cut(s) 62, 978, 1472, 2828
BmrI ACTGGG 1 cut(s) 2132
BmsI GCATC 5 cut(s) 407, 1074, 1236, 2221, 2844
BmuI ACTGGG 1 cut(s) 2132
BpiI GAAGAC 4 cut(s) 264, 311, 2378, 2511
BpmI CTGGAG 4 cut(s) 846, 999, 2345, 2849
Bpu1102I GCTNAGC 1 cut(s) 2924
BpuEI CTTGAG 4 cut(s) 1627, 1736, 2281, 2369
Bsa29I ATCGAT 1 cut(s) 415
BsaBI GATNNNNATC 1 cut(s) 1050
BsaHI GRCGYC 1 cut(s) 631
BsaI GGTCTC 2 cut(s) 239, 803
BsaJI CCNNGG 9 cut(s) 1121, 1318, 1527, 1898, 2027, 2338, 2443, 2536, 2640
BsaXI ACNNNNNCTCC 6 cut(s) 695, 725, 1163, 1193, 2318, 2348
Bsc4I CCNNNNNNNGG 9 cut(s) 132, 230, 554, 949, 1061, 1802, 1874, 2028, 2615
Bse118I RCCGGY 1 cut(s) 4
Bse1I ACTGG 6 cut(s) 179, 538, 682, 775, 1213, 2127
Bse3DI GCAATG 1 cut(s) 2601
Bse8I GATNNNNATC 1 cut(s) 1050
BseBI CCWGG 4 cut(s) 62, 978, 1472, 2828
BseCI ATCGAT 1 cut(s) 415
BseDI CCNNGG 9 cut(s) 1121, 1318, 1527, 1898, 2027, 2338, 2443, 2536, 2640
BseGI GGATG 1 cut(s) 1051
BseJI GATNNNNATC 1 cut(s) 1050
BseLI CCNNNNNNNGG 9 cut(s) 132, 230, 554, 949, 1061, 1802, 1874, 2028, 2615
BseMI GCAATG 1 cut(s) 2601
BseMII CTCAG 5 cut(s) 75, 1019, 1365, 1791, 2938
BseNI ACTGG 6 cut(s) 179, 538, 682, 775, 1213, 2127
BseRI GAGGAG 1 cut(s) 1394
BseSI GKGCMC 1 cut(s) 1828
BseXI GCAGC 1 cut(s) 2355
BseYI CCCAGC 1 cut(s) 835
BshFI GGCC 4 cut(s) 349, 1389, 2032, 2535
BshNI GGYRCC 3 cut(s) 630, 1125, 2213
BshVI ATCGAT 1 cut(s) 415
BsiHKAI GWGCWC 3 cut(s) 399, 1828, 2317
BsiHKCI CYCGRG 1 cut(s) 1783
BsiSI CCGG 2 cut(s) 5, 2260
BslFI GGGAC 3 cut(s) 1714, 1818, 2320
BslI CCNNNNNNNGG 9 cut(s) 132, 230, 554, 949, 1061, 1802, 1874, 2028, 2615
BsmAI GTCTC 7 cut(s) 239, 643, 803, 1494, 1885, 1985, 2728
BsmFI GGGAC 3 cut(s) 1714, 1818, 2320
BsnI GGCC 4 cut(s) 349, 1389, 2032, 2535
Bso31I GGTCTC 2 cut(s) 239, 803
BsoBI CYCGRG 1 cut(s) 1783
Bsp1286I GDGCHC 5 cut(s) 399, 1287, 1828, 1906, 2317
Bsp1407I TGTACA 1 cut(s) 2148
Bsp143I GATC 8 cut(s) 412, 874, 1359, 1643, 1666, 1690, 1862, 2080
Bsp1720I GCTNAGC 1 cut(s) 2924
Bsp19I CCATGG 2 cut(s) 2338, 2443
BspACI CCGC 2 cut(s) 2036, 2251
BspANI GGCC 4 cut(s) 349, 1389, 2032, 2535
BspCNI CTCAG 5 cut(s) 76, 1020, 1364, 1792, 2937
BspDI ATCGAT 1 cut(s) 415
BspHI TCATGA 3 cut(s) 322, 2077, 2950
BspLI GGNNCC 7 cut(s) 632, 975, 1127, 1316, 1451, 1806, 2215
BspMAI CTGCAG 2 cut(s) 648, 1892
BspPI GGATC 2 cut(s) 1354, 1651
BspQI GCTCTTC 1 cut(s) 498
BspT107I GGYRCC 3 cut(s) 630, 1125, 2213
BspTNI GGTCTC 2 cut(s) 239, 803
BsrDI GCAATG 1 cut(s) 2601
BsrFI RCCGGY 1 cut(s) 4
BsrGI TGTACA 1 cut(s) 2148
BsrI ACTGG 6 cut(s) 179, 538, 682, 775, 1213, 2127
BssAI RCCGGY 1 cut(s) 4
BssECI CCNNGG 9 cut(s) 1121, 1318, 1527, 1898, 2027, 2338, 2443, 2536, 2640
BssMI GATC 8 cut(s) 412, 874, 1359, 1643, 1666, 1690, 1862, 2080
BssNI GRCGYC 1 cut(s) 631
BssSI CACGAG 1 cut(s) 1463
BssT1I CCWWGG 7 cut(s) 1121, 1318, 1527, 1898, 2338, 2443, 2640
Bst2BI CACGAG 1 cut(s) 1463
Bst2UI CCWGG 4 cut(s) 62, 978, 1472, 2828
Bst4CI ACNGT 8 cut(s) 1432, 1585, 1921, 2043, 2378, 2471, 2712, 2962
Bst6I CTCTTC 1 cut(s) 498
BstACI GRCGYC 1 cut(s) 631
BstAPI GCANNNNNTGC 1 cut(s) 2180
BstAUI TGTACA 1 cut(s) 2148
BstC8I GCNNGC 4 cut(s) 1906, 2034, 2917, 2921
BstDSI CCRYGG 3 cut(s) 2027, 2338, 2443
BstF5I GGATG 1 cut(s) 1051
BstH2I RGCGCY 1 cut(s) 634
BstHHI GCGC 1 cut(s) 633
BstKTI GATC 8 cut(s) 415, 877, 1362, 1646, 1669, 1693, 1865, 2083
BstMAI GTCTC 7 cut(s) 239, 643, 803, 1494, 1885, 1985, 2728
BstMBI GATC 8 cut(s) 412, 874, 1359, 1643, 1666, 1690, 1862, 2080
BstMWI GCNNNNNNNGC 7 cut(s) 534, 836, 868, 2180, 2522, 2595, 2925
BstNI CCWGG 4 cut(s) 62, 978, 1472, 2828
BstNSI RCATGY 3 cut(s) 1636, 2295, 2522
BstSCI CCNGG 4 cut(s) 60, 976, 1470, 2826
BstSFI CTRYAG 4 cut(s) 105, 552, 644, 1888
BstSLI GKGCMC 1 cut(s) 1828
BstV1I GCAGC 1 cut(s) 2355
BstV2I GAAGAC 4 cut(s) 264, 311, 2378, 2511
BstX2I RGATCY 2 cut(s) 1643, 1690
BstXI CCANNNNNNTGG 2 cut(s) 482, 1661
BstYI RGATCY 2 cut(s) 1643, 1690
Bsu15I ATCGAT 1 cut(s) 415
BsuRI GGCC 4 cut(s) 349, 1389, 2032, 2535
BsuTUI ATCGAT 1 cut(s) 415
BtgI CCRYGG 3 cut(s) 2027, 2338, 2443
BtsCI GGATG 1 cut(s) 1051
BtsIMutI CAGTG 6 cut(s) 81, 394, 1025, 1573, 1828, 2467
Cac8I GCNNGC 4 cut(s) 1906, 2034, 2917, 2921
CciI TCATGA 3 cut(s) 322, 2077, 2950
CfoI GCGC 1 cut(s) 633
Cfr10I RCCGGY 1 cut(s) 4
Cfr13I GGNCC 3 cut(s) 433, 586, 1805
ClaI ATCGAT 1 cut(s) 415
Csp6I GTAC 3 cut(s) 1433, 2149, 2871
CspCI CAANNNNNGTGG 2 cut(s) 370, 405
CviQI GTAC 3 cut(s) 1433, 2149, 2871
DinI GGCGCC 1 cut(s) 632
DpnI GATC 8 cut(s) 414, 876, 1361, 1645, 1668, 1692, 1864, 2082
DpnII GATC 8 cut(s) 412, 874, 1359, 1643, 1666, 1690, 1862, 2080
DraI TTTAAA 2 cut(s) 1617, 2202
DrdI GACNNNNNNGTC 1 cut(s) 2960
DriI GACNNNNNGTC 1 cut(s) 1811
DseDI GACNNNNNNGTC 1 cut(s) 2960
EaeI YGGCCR 1 cut(s) 2030
Eam1104I CTCTTC 1 cut(s) 498
Eam1105I GACNNNNNGTC 1 cut(s) 1811
EarI CTCTTC 1 cut(s) 498
EciI GGCGGA 1 cut(s) 2266
Ecl136II GAGCTC 2 cut(s) 397, 2315
Eco130I CCWWGG 7 cut(s) 1121, 1318, 1527, 1898, 2338, 2443, 2640
Eco147I AGGCCT 1 cut(s) 1389
Eco24I GRGCYC 4 cut(s) 399, 1287, 1906, 2317
Eco31I GGTCTC 2 cut(s) 239, 803
Eco32I GATATC 2 cut(s) 2070, 2818
Eco47I GGWCC 3 cut(s) 433, 586, 1805
Eco53kI GAGCTC 2 cut(s) 397, 2315
Eco57I CTGAAG 2 cut(s) 593, 1804
Eco88I CYCGRG 1 cut(s) 1783
EcoICRI GAGCTC 2 cut(s) 397, 2315
EcoO109I RGGNCCY 1 cut(s) 1805
EcoRI GAATTC 1 cut(s) 53
EcoRII CCWGG 4 cut(s) 60, 976, 1470, 2826
EcoRV GATATC 2 cut(s) 2070, 2818
EcoT14I CCWWGG 7 cut(s) 1121, 1318, 1527, 1898, 2338, 2443, 2640
EcoT22I ATGCAT 1 cut(s) 1251
EcoT38I GRGCYC 4 cut(s) 399, 1287, 1906, 2317
EgeI GGCGCC 1 cut(s) 632
EheI GGCGCC 1 cut(s) 632
ErhI CCWWGG 7 cut(s) 1121, 1318, 1527, 1898, 2338, 2443, 2640
FaqI GGGAC 3 cut(s) 1714, 1818, 2320
FblI GTMKAC 2 cut(s) 220, 2898
Fnu4HI GCNGC 1 cut(s) 2344
FokI GGATG 1 cut(s) 1058
FriOI GRGCYC 4 cut(s) 399, 1287, 1906, 2317
Fsp4HI GCNGC 1 cut(s) 2344
FspBI CTAG 7 cut(s) 15, 50, 1319, 1733, 1899, 2195, 2484
GlaI GCGC 1 cut(s) 632
GluI GCNGC 1 cut(s) 2344
GsaI CCCAGC 1 cut(s) 839
GsuI CTGGAG 4 cut(s) 846, 999, 2345, 2849
HaeII RGCGCY 1 cut(s) 634
HaeIII GGCC 4 cut(s) 349, 1389, 2032, 2535
HapII CCGG 2 cut(s) 5, 2260
HhaI GCGC 1 cut(s) 633
Hin1I GRCGYC 1 cut(s) 631
Hin6I GCGC 1 cut(s) 631
HinP1I GCGC 1 cut(s) 631
HincII GTYRAC 2 cut(s) 1816, 2899
HindII GTYRAC 2 cut(s) 1816, 2899
HindIII AAGCTT 3 cut(s) 128, 860, 1603
HpaII CCGG 2 cut(s) 5, 2260
HphI GGTGA 7 cut(s) 404, 1676, 1857, 1875, 2657, 2779, 2819
HpyCH4III ACNGT 8 cut(s) 1432, 1585, 1921, 2043, 2378, 2471, 2712, 2962
HpyCH4IV ACGT 1 cut(s) 2307
HpyF10VI GCNNNNNNNGC 7 cut(s) 534, 836, 868, 2180, 2522, 2595, 2925
HpySE526I ACGT 1 cut(s) 2307
Hsp92I GRCGYC 1 cut(s) 631
HspAI GCGC 1 cut(s) 631
KasI GGCGCC 1 cut(s) 630
Kzo9I GATC 8 cut(s) 412, 874, 1359, 1643, 1666, 1690, 1862, 2080
LguI GCTCTTC 1 cut(s) 498
LmnI GCTCC 3 cut(s) 402, 827, 899
Lsp1109I GCAGC 1 cut(s) 2355
LweI GCATC 5 cut(s) 407, 1074, 1236, 2221, 2844
MaeI CTAG 7 cut(s) 15, 50, 1319, 1733, 1899, 2195, 2484
MaeII ACGT 1 cut(s) 2307
MaeIII GTNAC 5 cut(s) 280, 557, 1139, 1268, 2645
MalI GATC 8 cut(s) 414, 876, 1361, 1645, 1668, 1692, 1864, 2082
MboI GATC 8 cut(s) 412, 874, 1359, 1643, 1666, 1690, 1862, 2080
MfeI CAATTG 3 cut(s) 1155, 1227, 2175
MflI RGATCY 2 cut(s) 1643, 1690
MhlI GDGCHC 5 cut(s) 399, 1287, 1828, 1906, 2317
Mly113I GGCGCC 1 cut(s) 631
MlyI GAGTC 5 cut(s) 226, 645, 922, 1450, 1887
MmeI TCCRAC 1 cut(s) 1604
Mph1103I ATGCAT 1 cut(s) 1251
MroXI GAANNNNTTC 2 cut(s) 507, 1389
MseI TTAA 9 cut(s) 264, 738, 945, 965, 1616, 2045, 2201, 2772, 2795
MslI CAYNNNNRTG 2 cut(s) 1637, 2268
MspA1I CMGCKG 2 cut(s) 1952, 2036
MspI CCGG 2 cut(s) 5, 2260
MspR9I CCNGG 4 cut(s) 62, 978, 1472, 2828
MunI CAATTG 3 cut(s) 1155, 1227, 2175
MvaI CCWGG 4 cut(s) 62, 978, 1472, 2828
MwoI GCNNNNNNNGC 7 cut(s) 534, 836, 868, 2180, 2522, 2595, 2925
NarI GGCGCC 1 cut(s) 631
NcoI CCATGG 2 cut(s) 2338, 2443
NdeII GATC 8 cut(s) 412, 874, 1359, 1643, 1666, 1690, 1862, 2080
NlaIV GGNNCC 7 cut(s) 632, 975, 1127, 1316, 1451, 1806, 2215
NmuCI GTSAC 2 cut(s) 1139, 2645
NsiI ATGCAT 1 cut(s) 1251
NspI RCATGY 3 cut(s) 1636, 2295, 2522
PagI TCATGA 3 cut(s) 322, 2077, 2950
PceI AGGCCT 1 cut(s) 1389
PciI ACATGT 2 cut(s) 1632, 2518
PciSI GCTCTTC 1 cut(s) 498
PcsI WCGNNNNNNNCGW 1 cut(s) 1461
PdmI GAANNNNTTC 2 cut(s) 507, 1389
PfeI GAWTC 8 cut(s) 73, 931, 996, 1076, 1792, 1894, 2680, 2755
PflMI CCANNNNNTGG 2 cut(s) 1874, 2615
PfoI TCCNGGA 2 cut(s) 1470, 2826
PkrI GCNGC 1 cut(s) 2345
PleI GAGTC 5 cut(s) 225, 645, 921, 1449, 1886
PluTI GGCGCC 1 cut(s) 634
PpsI GAGTC 5 cut(s) 225, 645, 921, 1449, 1886
PpuMI RGGWCCY 1 cut(s) 1805
PscI ACATGT 2 cut(s) 1632, 2518
PsiI TTATAA 1 cut(s) 1773
Psp124BI GAGCTC 2 cut(s) 399, 2317
Psp5II RGGWCCY 1 cut(s) 1805
Psp6I CCWGG 4 cut(s) 60, 976, 1470, 2826
PspFI CCCAGC 1 cut(s) 835
PspGI CCWGG 4 cut(s) 60, 976, 1470, 2826
PspN4I GGNNCC 7 cut(s) 632, 975, 1127, 1316, 1451, 1806, 2215
PspPI GGNCC 3 cut(s) 433, 586, 1805
PspPPI RGGWCCY 1 cut(s) 1805
PstI CTGCAG 2 cut(s) 648, 1892
PsuI RGATCY 2 cut(s) 1643, 1690
PvuII CAGCTG 1 cut(s) 1952
RsaI GTAC 3 cut(s) 1434, 2150, 2872
RsaNI GTAC 3 cut(s) 1433, 2149, 2871
RseI CAYNNNNRTG 2 cut(s) 1637, 2268
SacI GAGCTC 2 cut(s) 399, 2317
SalI GTCGAC 1 cut(s) 2897
SapI GCTCTTC 1 cut(s) 498
SaqAI TTAA 9 cut(s) 264, 738, 945, 965, 1616, 2045, 2201, 2772, 2795
SatI GCNGC 1 cut(s) 2344
Sau3AI GATC 8 cut(s) 412, 874, 1359, 1643, 1666, 1690, 1862, 2080
Sau96I GGNCC 3 cut(s) 433, 586, 1805
SbfI CCTGCAGG 1 cut(s) 1892
SchI GAGTC 5 cut(s) 226, 645, 922, 1450, 1887
ScrFI CCNGG 4 cut(s) 62, 978, 1472, 2828
SdaI CCTGCAGG 1 cut(s) 1892
SduI GDGCHC 5 cut(s) 399, 1287, 1828, 1906, 2317
SfaNI GCATC 5 cut(s) 407, 1074, 1236, 2221, 2844
SfcI CTRYAG 4 cut(s) 105, 552, 644, 1888
SfoI GGCGCC 1 cut(s) 632
SinI GGWCC 3 cut(s) 433, 586, 1805
SmiMI CAYNNNNRTG 2 cut(s) 1637, 2268
SmlI CTYRAG 4 cut(s) 1606, 1751, 2296, 2348
SmoI CTYRAG 4 cut(s) 1606, 1751, 2296, 2348
Sse8387I CCTGCAGG 1 cut(s) 1892
SseBI AGGCCT 1 cut(s) 1389
SsiI CCGC 2 cut(s) 2036, 2251
SspDI GGCGCC 1 cut(s) 630
SspI AATATT 4 cut(s) 175, 355, 790, 2491
SspMI CTAG 7 cut(s) 15, 50, 1319, 1733, 1899, 2195, 2484
SstI GAGCTC 2 cut(s) 399, 2317
StuI AGGCCT 1 cut(s) 1389
StyD4I CCNGG 4 cut(s) 60, 976, 1470, 2826
StyI CCWWGG 7 cut(s) 1121, 1318, 1527, 1898, 2338, 2443, 2640
TaaI ACNGT 8 cut(s) 1432, 1585, 1921, 2043, 2378, 2471, 2712, 2962
TaiI ACGT 1 cut(s) 2310
TaqI TCGA 9 cut(s) 97, 415, 566, 1278, 1455, 1545, 2499, 2753, 2898
TatI WGTACW 1 cut(s) 2148
TfiI GAWTC 8 cut(s) 73, 931, 996, 1076, 1792, 1894, 2680, 2755
Tru1I TTAA 9 cut(s) 264, 738, 945, 965, 1616, 2045, 2201, 2772, 2795
Tru9I TTAA 9 cut(s) 264, 738, 945, 965, 1616, 2045, 2201, 2772, 2795
TscAI CASTG 6 cut(s) 88, 394, 1032, 1573, 1828, 2474
TseFI GTSAC 2 cut(s) 1139, 2645
TseI GCWGC 1 cut(s) 2343
Tsp45I GTSAC 2 cut(s) 1139, 2645
TspDTI ATGAA 8 cut(s) 234, 311, 500, 753, 854, 2517, 2721, 2939
TspRI CASTG 6 cut(s) 88, 394, 1032, 1573, 1828, 2474
Van91I CCANNNNNTGG 2 cut(s) 1874, 2615
VneI GTGCAC 1 cut(s) 1824
VpaK11BI GGWCC 3 cut(s) 433, 586, 1805
XapI RAATTY 7 cut(s) 53, 383, 774, 886, 1595, 1618, 1683
XbaI TCTAGA 1 cut(s) 2194
XceI RCATGY 3 cut(s) 1636, 2295, 2522
XcmI CCANNNNNNNNNTGG 1 cut(s) 1443
XmaJI CCTAGG 2 cut(s) 1318, 1898
XmiI GTMKAC 2 cut(s) 220, 2898
XmnI GAANNNNTTC 2 cut(s) 507, 1389
XspI CTAG 7 cut(s) 15, 50, 1319, 1733, 1899, 2195, 2484
Zsp2I ATGCAT 1 cut(s) 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.