RLG00000031856

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000058
Physical Location & Seq
Forward (+)
8793064 .. 8798346
5283 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031856

Sequence Viewer

Length: 3135 bp
ATGGAGAGAATTACTTGGTTCTTCCTGGCCGCGACTAGCTGCTTAACCATGGCAGCAGCACAAACCAATAGTAATCTCACCACAGACAAGTATGCTCTTCTTGCTCTCAAAGCCCGTATCACCAATGACCCTCAGAACATTATTTTCACCAACTGGTCAACCACTACCCCGGTTTGCAACTGGGTTGGTGTCACTTGTGGTGCACGCCATCATCGAGTCGCAATCTTGAACCTCTCTTACATGGGACTCACAAGCACCATTCCTCCGGAACTTGGCAACCTTTCATTTCTTGTTAGGCTAAGCTTTAAAAATAATAGTTTTCACGGTACCCTGCCTCCAGAGTTGGCTCATCTGCGGAGATTAAAGGTCATTACCTTTGGTTTCAACAACTTTATGGGTATCATTCCGTCATGGTTCGGGTCCTTATCAAAACTTCAAGCCTTTTATTTGTATGGTAATCAGTTTTCGGGTTACATACCCACTGCCATTAGCAACTTATTAGCACTCGAAATAATTGATTTGAAGTATAACCAGCTATCAGGTAGCATACCCGCTGCCATCTTCAACTTATCAGCACTCGAAGTAATCAATTTGAGCTATAACCAGCTATCAGAACTTCCGAATGAGATTGGCAATTTGGATCAATTAGAAGAATTGTATATGCAAAACAATGCCTTACAAGGGCCTCTTCCTATGGTTGTCTTCAACATATCGTCTTTGACAACTTTGACCTTCTTTGGAAACAACTTGACTGGTAGCCTTCCGGACAATATATGTCAATATCTTCCGAGCATTCAAATATTGAGTTTGTCAAAAAACCAACTTGCCGGTCCACTCTCATCTAAATGGTCGCAATGCAAACAACTTCTTTCATTAGAGATGGGGATGAATAGTTTTAGTGGAAGCATACCCGCCAATATTGCCAACTTAACCCAAATACAGAAGATTGTCCTCAGCACAAACTATTTGACAGGCGTTGATATAATTGTGGCAGGTACCATACCACATGAGATTGGTCATCTTCCGAATTTAGAGACATTGAGCCTTGGAACTAATAATCTCAATGGCCTCATCCCATTTTCAATTTTCAATATTTCCACGATAACATTATTAGATCTTACTGCTAATGATCTCTTAGGTAGCCTCCCAAAAAAGATAGGCCTTGAGCTTCCAAACCTACTAGAGCTCTATCTTGGAGGAAATAAACTCAGCGGAGTAATCCCCAAGTCCATCTCCAATGCTTCTCAGCTCACGATCATAGATCTGGGAGATAACTTCCTTTCCGGCTTTATTCCTAGCACGCTATGTACCTTAACAAAGCTTGAGGTGCTTTCCTTATTCCAGAATAATTTAACCCTTGATACTTCTGTTCCAGATGTAGATATTCTCTCTTGTTTGCCAAATCTTAAAAAATTGGTAGAATTCCAAATCATAAACAATCCATTAAATGCCAAACTTCCGATTTCCTTTTGGAATTTCTCTACGTCACTTCACATTGTCGAACTAGGGAATTGCAAAATGAGAGGTAACATCCCCAATGGGATAGGCCACTTGAGCAGCTTGATACACTTGGATCTGGGAGAAAATGAACTAAGTGGACCAGTTCCGACCTCAATGGGAAGATTGCAAAACCTCCAAATTTTGGATTTGAGTGGTAACAAATTGCAAGGACACATTCCAGATGAGCTTTGTCAACTGAACCATCTTGATAAGTTATCTTTGTATGGGAATCAGCTTTCAGGTTCAATACCTTCATGCTTGGGTAATCTAACCGCAACCCTAAGAAGTCTATTATTAGGGTCTAATATGTTGAATCTCACAATACCATCTACCTTGTGGAGACTCACAGATATCTTGAAATTAGACTTATCATCCAATTCACTAATTGGACCTGTCTCGGAAGATGTTGGTAATTTGAAAGTTGCCACACTTATAGAGTTATCAAACAACCAATTCTCCGGTAGTATACCAAACAGCATTGGGAGCCTACAGAATTTGGTCCATCTCTCTTTGGCAAATAATAATTTACAAGGACTAATTCCAAGTTCAGTTGGCAAGTCGATCAGCTTGGAATTTTTGGATTTATCCATAAACAATTTGTCAGGAGTGATTCCCAAGTCTCTTGAATCACTCACATATCTCAAGTATCTGAATTTGTCTTTCAACAAACTCAAAGGAGAAATTCCAACAGGCGGACCTTTCAAAAACTTTTCTGCTCAATCTTTTGTTTCGAACCATGGACTCTGTGGTGCATCCCAATTTCATGTTCCACCATGTAAAAGGAAAACTAGCAGATCTATCTTGAAATATGTCATTCCAGGGATCTTGTCACCGATGCTTCTTTTGACCATCTTAATTTGGATGGTCATGTTATGCAGAAAAAAGGATGTGGAAGCTCCAACAGAGATTGCTCTTTTGGCTCAACTTGAATGGAAAAGAGTCTCATACAACGAAATTGTTAGTGCGACAAATGGATTCAATCTAAGAAACTTACTTGGGAGGGGGGGTTTTGGCTCAGTATATAGAGGAAGACTGTCAGATGGAATAGATGTTGCTATAAAGGTTTTTAATTCAGAGACAGAAAGGGCATTTACAAGTTTTGAGGTTGAATGTGAAATGCTAAGCAATATTCGTCATCGAAATCTTGTCAAAGTCATTAGTTGCTGCAGTGAAATTGATTTCAAAGCTCTTATACTGAGTTTCATGCCTAATGGGAGCCTGGAAAAGTGGTTGTATTCTCAGAATTGTTCTTTGAACATGCTGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTATCTCCATCATGGTTATGATGTACCTATTGTCCATTGTGATTTGAAGCCAAGCAATATACTACTAGATGATGATATGGGTGCACATGTTTCTGATTTTGGCATTGCAAAATTCCTAAATGGAGGAGATTCTATGACTCAAACCATGACCCTAGCCACAATTGGGTATATGGCTCCAGAGTATGGACTGGAAGGAAAAGTTTCGAGAAAGGGGGATGTGTATGGTTTTGGTATTGTAGTGATGGAAACATTCACAAGAAGGAATCCAACAGATGAAATAGAGGCTCAGGACCAACACAAAGGCAGGCAATACCATCCATCTGATCTGTGA

Protein Analysis

1045

Amino Acids

114.46

Weight (kDa)

6.18

Isoelectric Point (pI)

31.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 27 - 66 7.1e-10 Leucine rich repeat N-terminal domain
LRR_8 PF13855 119 - 179 4.3e-07 Leucine rich repeat
LRR_14 PF23598 162 - 245 5.9e-08 Leucine-rich repeat region
LRR_8 PF13855 184 - 226 2.1e-07 Leucine rich repeat
LRR_8 PF13855 391 - 451 1e-07 Leucine rich repeat
LRR_14 PF23598 490 - 621 7.3e-09 Leucine-rich repeat region
LRR_8 PF13855 497 - 555 3.7e-06 Leucine rich repeat
LRR_8 PF13855 539 - 579 5.8e-06 Leucine rich repeat
LRR_14 PF23598 615 - 724 4.1e-07 Leucine-rich repeat region
LRR_8 PF13855 665 - 724 4.3e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 828 - 1032 7.9e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 828 - 1033 1.4e-39 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 983
Acc65I GGTACC 2 cut(s) 326, 995
AccB1I GGYRCC 2 cut(s) 326, 995
AccB7I CCANNNNNTGG 2 cut(s) 1642, 2987
AccI GTMKAC 1 cut(s) 1966
AccII CGCG 1 cut(s) 32
AccIII TCCGGA 2 cut(s) 265, 763
AciI CCGC 7 cut(s) 30, 355, 552, 912, 1212, 1773, 2193
AclWI GGATC 3 cut(s) 648, 1581, 2330
AcoI YGGCCR 1 cut(s) 27
AcsI RAATTY 9 cut(s) 1027, 1421, 1474, 1638, 1993, 2072, 2152, 2181, 2915
AfaI GTAC 4 cut(s) 328, 997, 1309, 2829
AfiI CCNNNNNNNGG 6 cut(s) 272, 681, 1642, 2192, 2967, 2987
AflIII ACRYGT 1 cut(s) 2890
AjnI CCWGG 3 cut(s) 24, 2317, 2718
AjuI GAANNNNNNNTTGG 2 cut(s) 2250, 2282
Alw21I GWGCWC 3 cut(s) 205, 1188, 2890
Alw26I GTCTC 6 cut(s) 1028, 1834, 1900, 2124, 2446, 2570
Alw44I GTGCAC 2 cut(s) 201, 2886
AlwI GGATC 3 cut(s) 648, 1581, 2330
Aor13HI TCCGGA 2 cut(s) 265, 763
AoxI GGCC 5 cut(s) 27, 683, 1066, 1159, 1546
ApaLI GTGCAC 2 cut(s) 201, 2886
ApeKI GCWGC 7 cut(s) 39, 53, 56, 554, 1557, 2664, 2761
ApoI RAATTY 9 cut(s) 1027, 1421, 1474, 1638, 1993, 2072, 2152, 2181, 2915
Asp700I GAANNNNTTC 1 cut(s) 3004
Asp718I GGTACC 2 cut(s) 326, 995
AspS9I GGNCC 8 cut(s) 420, 683, 830, 1598, 1889, 1999, 2195, 3094
AsuC2I CCSGG 1 cut(s) 170
AsuHPI GGTGA 4 cut(s) 70, 112, 139, 2322
AsuII TTCGAA 1 cut(s) 2231
AvaII GGWCC 7 cut(s) 420, 830, 1598, 1889, 1999, 2195, 3094
BaeGI GKGCMC 2 cut(s) 205, 2890
BaeI ACNNNNGTAYC 2 cut(s) 1353, 1386
BanI GGYRCC 2 cut(s) 326, 995
BanII GRGCYC 1 cut(s) 1188
BbsI GAAGAC 2 cut(s) 694, 2536
Bbv12I GWGCWC 3 cut(s) 205, 1188, 2890
BbvCI CCTCAGC 1 cut(s) 953
BbvI GCAGC 7 cut(s) 26, 65, 68, 541, 1569, 2651, 2748
BciT130I CCWGG 3 cut(s) 26, 2319, 2720
BcnI CCSGG 1 cut(s) 170
BcoDI GTCTC 6 cut(s) 1028, 1834, 1900, 2124, 2446, 2570
BfaI CTAG 7 cut(s) 36, 1181, 1296, 1505, 2289, 2870, 2957
BfmI CTRYAG 3 cut(s) 1988, 2665, 2762
BfuAI ACCTGC 1 cut(s) 983
BglII AGATCT 3 cut(s) 1114, 1261, 2294
BisI GCNGC 8 cut(s) 30, 40, 54, 57, 555, 1558, 2665, 2762
BlpI GCTNAGC 2 cut(s) 299, 2621
BlsI GCNGC 8 cut(s) 31, 41, 55, 58, 556, 1559, 2666, 2763
Bme1390I CCNGG 4 cut(s) 26, 170, 2319, 2720
Bme18I GGWCC 7 cut(s) 420, 830, 1598, 1889, 1999, 2195, 3094
BmgT120I GGNCC 8 cut(s) 420, 683, 830, 1598, 1889, 1999, 2195, 3094
BmiI GGNNCC 6 cut(s) 328, 421, 997, 1985, 2717, 2979
BmrFI CCNGG 4 cut(s) 26, 170, 2319, 2720
BmrI ACTGGG 1 cut(s) 190
BmsI GCATC 3 cut(s) 2261, 2325, 2801
BmuI ACTGGG 1 cut(s) 190
BpiI GAAGAC 2 cut(s) 694, 2536
BpmI CTGGAG 2 cut(s) 321, 2964
Bpu10I CCTNAGC 2 cut(s) 953, 3090
Bpu1102I GCTNAGC 2 cut(s) 299, 2621
Bpu14I TTCGAA 1 cut(s) 2231
BpuEI CTTGAG 4 cut(s) 1184, 1343, 1573, 2126
BpuMI CCSGG 1 cut(s) 170
BsaJI CCNNGG 5 cut(s) 48, 168, 1045, 2236, 2318
BsaWI WCCGGW 3 cut(s) 265, 763, 1958
BsaXI ACNNNNNCTCC 8 cut(s) 247, 277, 319, 349, 1940, 1970, 2491, 2521
Bsc4I CCNNNNNNNGG 6 cut(s) 272, 681, 1642, 2192, 2967, 2987
Bse118I RCCGGY 1 cut(s) 827
Bse1I ACTGG 5 cut(s) 158, 185, 757, 1601, 2997
Bse3DI GCAATG 2 cut(s) 860, 2907
BseAI TCCGGA 2 cut(s) 265, 763
BseBI CCWGG 3 cut(s) 26, 2319, 2720
BseDI CCNNGG 5 cut(s) 48, 168, 1045, 2236, 2318
BseGI GGATG 9 cut(s) 891, 1071, 1530, 1871, 2252, 2367, 2392, 3025, 3118
BseLI CCNNNNNNNGG 6 cut(s) 272, 681, 1642, 2192, 2967, 2987
BseMI GCAATG 2 cut(s) 860, 2907
BseMII CTCAG 8 cut(s) 146, 967, 1222, 1259, 2529, 2687, 2753, 3104
BseNI ACTGG 5 cut(s) 158, 185, 757, 1601, 2997
BseRI GAGGAG 1 cut(s) 2943
BseSI GKGCMC 2 cut(s) 205, 2890
BseXI GCAGC 7 cut(s) 26, 65, 68, 541, 1569, 2651, 2748
Bsh1236I CGCG 1 cut(s) 32
BshFI GGCC 5 cut(s) 29, 685, 1068, 1161, 1548
BshNI GGYRCC 2 cut(s) 326, 995
BsiHKAI GWGCWC 3 cut(s) 205, 1188, 2890
BsiSI CCGG 6 cut(s) 170, 266, 764, 828, 1284, 1959
BslFI GGGAC 1 cut(s) 258
BslI CCNNNNNNNGG 6 cut(s) 272, 681, 1642, 2192, 2967, 2987
BsmAI GTCTC 6 cut(s) 1028, 1834, 1900, 2124, 2446, 2570
BsmFI GGGAC 1 cut(s) 258
BsmI GAATGC 1 cut(s) 792
BsnI GGCC 5 cut(s) 29, 685, 1068, 1161, 1548
Bsp119I TTCGAA 1 cut(s) 2231
Bsp1286I GDGCHC 3 cut(s) 205, 1188, 2890
Bsp13I TCCGGA 2 cut(s) 265, 763
Bsp1720I GCTNAGC 2 cut(s) 299, 2621
Bsp19I CCATGG 2 cut(s) 48, 2236
BspACI CCGC 7 cut(s) 30, 355, 552, 912, 1212, 1773, 2193
BspANI GGCC 5 cut(s) 29, 685, 1068, 1161, 1548
BspCNI CTCAG 8 cut(s) 145, 966, 1221, 1258, 2528, 2688, 2752, 3103
BspEI TCCGGA 2 cut(s) 265, 763
BspFNI CGCG 1 cut(s) 32
BspLI GGNNCC 6 cut(s) 328, 421, 997, 1985, 2717, 2979
BspMAI CTGCAG 2 cut(s) 2669, 2766
BspMI ACCTGC 1 cut(s) 983
BspPI GGATC 3 cut(s) 648, 1581, 2330
BspQI GCTCTTC 1 cut(s) 102
BspT104I TTCGAA 1 cut(s) 2231
BspT107I GGYRCC 2 cut(s) 326, 995
BsrDI GCAATG 2 cut(s) 860, 2907
BsrFI RCCGGY 1 cut(s) 827
BsrI ACTGG 5 cut(s) 158, 185, 757, 1601, 2997
BssAI RCCGGY 1 cut(s) 827
BssECI CCNNGG 5 cut(s) 48, 168, 1045, 2236, 2318
BssNAI GTATAC 1 cut(s) 1967
BssT1I CCWWGG 3 cut(s) 48, 1045, 2236
Bst1107I GTATAC 1 cut(s) 1967
Bst2UI CCWGG 3 cut(s) 26, 2319, 2720
Bst4CI ACNGT 2 cut(s) 326, 2535
Bst6I CTCTTC 2 cut(s) 102, 693
BstBI TTCGAA 1 cut(s) 2231
BstC8I GCNNGC 3 cut(s) 205, 1301, 3110
BstDSI CCRYGG 2 cut(s) 48, 2236
BstF5I GGATG 9 cut(s) 891, 1071, 1530, 1871, 2252, 2367, 2392, 3025, 3118
BstFNI CGCG 1 cut(s) 32
BstMAI GTCTC 6 cut(s) 1028, 1834, 1900, 2124, 2446, 2570
BstMWI GCNNNNNNNGC 7 cut(s) 101, 110, 920, 1327, 1554, 1983, 2417
BstNI CCWGG 3 cut(s) 26, 2319, 2720
BstNSI RCATGY 2 cut(s) 2761, 2894
BstSCI CCNGG 4 cut(s) 24, 168, 2317, 2718
BstSFI CTRYAG 3 cut(s) 1988, 2665, 2762
BstSLI GKGCMC 2 cut(s) 205, 2890
BstUI CGCG 1 cut(s) 32
BstV1I GCAGC 7 cut(s) 26, 65, 68, 541, 1569, 2651, 2748
BstV2I GAAGAC 2 cut(s) 694, 2536
BstX2I RGATCY 5 cut(s) 1114, 1261, 1573, 2294, 2322
BstYI RGATCY 5 cut(s) 1114, 1261, 1573, 2294, 2322
BstZ17I GTATAC 1 cut(s) 1967
BsuRI GGCC 5 cut(s) 29, 685, 1068, 1161, 1548
BtgI CCRYGG 2 cut(s) 48, 2236
BtsCI GGATG 9 cut(s) 891, 1071, 1530, 1871, 2252, 2367, 2392, 3025, 3118
BtsI GCAGTG 2 cut(s) 480, 2674
BtsIMutI CAGTG 2 cut(s) 480, 2674
BveI ACCTGC 1 cut(s) 983
Cac8I GCNNGC 3 cut(s) 205, 1301, 3110
Cfr10I RCCGGY 1 cut(s) 827
Cfr13I GGNCC 8 cut(s) 420, 683, 830, 1598, 1889, 1999, 2195, 3094
Csp6I GTAC 4 cut(s) 327, 996, 1308, 2828
CviQI GTAC 4 cut(s) 327, 996, 1308, 2828
DraI TTTAAA 1 cut(s) 307
EaeI YGGCCR 1 cut(s) 27
Eam1104I CTCTTC 2 cut(s) 102, 693
EarI CTCTTC 2 cut(s) 102, 693
EciI GGCGGA 1 cut(s) 2208
Ecl136II GAGCTC 1 cut(s) 1186
Eco130I CCWWGG 3 cut(s) 48, 1045, 2236
Eco147I AGGCCT 1 cut(s) 1161
Eco24I GRGCYC 1 cut(s) 1188
Eco32I GATATC 1 cut(s) 1852
Eco47I GGWCC 7 cut(s) 420, 830, 1598, 1889, 1999, 2195, 3094
Eco53kI GAGCTC 1 cut(s) 1186
EcoICRI GAGCTC 1 cut(s) 1186
EcoO109I RGGNCCY 2 cut(s) 420, 683
EcoRI GAATTC 1 cut(s) 1421
EcoRII CCWGG 3 cut(s) 24, 2317, 2718
EcoRV GATATC 1 cut(s) 1852
EcoT14I CCWWGG 3 cut(s) 48, 1045, 2236
EcoT38I GRGCYC 1 cut(s) 1188
ErhI CCWWGG 3 cut(s) 48, 1045, 2236
FalI AAGNNNNNCTT 2 cut(s) 672, 704
FaqI GGGAC 1 cut(s) 258
FauI CCCGC 2 cut(s) 559, 919
FblI GTMKAC 1 cut(s) 1966
Fnu4HI GCNGC 8 cut(s) 30, 40, 54, 57, 555, 1558, 2665, 2762
FokI GGATG 9 cut(s) 898, 1058, 1517, 1858, 2239, 2374, 2399, 3032, 3105
FriOI GRGCYC 1 cut(s) 1188
Fsp4HI GCNGC 8 cut(s) 30, 40, 54, 57, 555, 1558, 2665, 2762
FspBI CTAG 7 cut(s) 36, 1181, 1296, 1505, 2289, 2870, 2957
GluI GCNGC 8 cut(s) 30, 40, 54, 57, 555, 1558, 2665, 2762
GsuI CTGGAG 2 cut(s) 321, 2964
HaeIII GGCC 5 cut(s) 29, 685, 1068, 1161, 1548
HapII CCGG 6 cut(s) 170, 266, 764, 828, 1284, 1959
HincII GTYRAC 2 cut(s) 159, 1694
HindII GTYRAC 2 cut(s) 159, 1694
HindIII AAGCTT 2 cut(s) 301, 1319
HpaII CCGG 6 cut(s) 170, 266, 764, 828, 1284, 1959
HphI GGTGA 4 cut(s) 70, 112, 139, 2322
Hpy166II GTNNAC 7 cut(s) 159, 203, 833, 1598, 1694, 1967, 2888
Hpy8I GTNNAC 7 cut(s) 159, 203, 833, 1598, 1694, 1967, 2888
HpyAV CCTTC 5 cut(s) 742, 770, 1761, 2990, 3057
HpyCH4III ACNGT 2 cut(s) 326, 2535
HpyCH4IV ACGT 1 cut(s) 1484
HpyF10VI GCNNNNNNNGC 7 cut(s) 101, 110, 920, 1327, 1554, 1983, 2417
HpySE526I ACGT 1 cut(s) 1484
Kpn2I TCCGGA 2 cut(s) 265, 763
KpnI GGTACC 2 cut(s) 330, 999
LguI GCTCTTC 1 cut(s) 102
LmnI GCTCC 4 cut(s) 1983, 2401, 2715, 2983
Lsp1109I GCAGC 7 cut(s) 26, 65, 68, 541, 1569, 2651, 2748
LweI GCATC 3 cut(s) 2261, 2325, 2801
MaeI CTAG 7 cut(s) 36, 1181, 1296, 1505, 2289, 2870, 2957
MaeII ACGT 1 cut(s) 1484
MaeIII GTNAC 6 cut(s) 190, 470, 1485, 1526, 1655, 2328
MfeI CAATTG 1 cut(s) 2964
MflI RGATCY 5 cut(s) 1114, 1261, 1573, 2294, 2322
MhlI GDGCHC 3 cut(s) 205, 1188, 2890
MlyI GAGTC 6 cut(s) 225, 240, 1836, 2235, 2448, 2935
MmeI TCCRAC 5 cut(s) 1631, 2210, 2423, 2751, 3095
MroI TCCGGA 2 cut(s) 265, 763
MroXI GAANNNNTTC 1 cut(s) 3004
MslI CAYNNNNRTG 2 cut(s) 844, 2820
MspA1I CMGCKG 2 cut(s) 554, 1212
MspI CCGG 6 cut(s) 170, 266, 764, 828, 1284, 1959
MspR9I CCNGG 4 cut(s) 26, 170, 2319, 2720
MunI CAATTG 1 cut(s) 2964
Mva1269I GAATGC 1 cut(s) 792
MvaI CCWGG 3 cut(s) 26, 2319, 2720
MvnI CGCG 1 cut(s) 32
MwoI GCNNNNNNNGC 7 cut(s) 101, 110, 920, 1327, 1554, 1983, 2417
NciI CCSGG 1 cut(s) 170
NcoI CCATGG 2 cut(s) 48, 2236
NlaIV GGNNCC 6 cut(s) 328, 421, 997, 1985, 2717, 2979
NmuCI GTSAC 3 cut(s) 190, 1485, 2328
NspI RCATGY 2 cut(s) 2761, 2894
NspV TTCGAA 1 cut(s) 2231
PceI AGGCCT 1 cut(s) 1161
PciI ACATGT 1 cut(s) 2890
PciSI GCTCTTC 1 cut(s) 102
PcsI WCGNNNNNNNCGW 1 cut(s) 211
PctI GAATGC 1 cut(s) 792
PdmI GAANNNNTTC 1 cut(s) 3004
PfeI GAWTC 7 cut(s) 1729, 1813, 2110, 2126, 2475, 2933, 3067
PflMI CCANNNNNTGG 2 cut(s) 1642, 2987
PkrI GCNGC 8 cut(s) 31, 41, 55, 58, 556, 1559, 2666, 2763
PleI GAGTC 6 cut(s) 224, 240, 1836, 2235, 2447, 2935
PpsI GAGTC 6 cut(s) 224, 240, 1836, 2235, 2447, 2935
PpuMI RGGWCCY 1 cut(s) 420
PscI ACATGT 1 cut(s) 2890
Psp124BI GAGCTC 1 cut(s) 1188
Psp5II RGGWCCY 1 cut(s) 420
Psp6I CCWGG 3 cut(s) 24, 2317, 2718
PspGI CCWGG 3 cut(s) 24, 2317, 2718
PspN4I GGNNCC 6 cut(s) 328, 421, 997, 1985, 2717, 2979
PspPI GGNCC 8 cut(s) 420, 683, 830, 1598, 1889, 1999, 2195, 3094
PspPPI RGGWCCY 1 cut(s) 420
PsrI GAACNNNNNNTAC 2 cut(s) 221, 253
PstI CTGCAG 2 cut(s) 2669, 2766
PsuI RGATCY 5 cut(s) 1114, 1261, 1573, 2294, 2322
RsaI GTAC 4 cut(s) 328, 997, 1309, 2829
RsaNI GTAC 4 cut(s) 327, 996, 1308, 2828
RseI CAYNNNNRTG 2 cut(s) 844, 2820
SacI GAGCTC 1 cut(s) 1188
SapI GCTCTTC 1 cut(s) 102
SatI GCNGC 8 cut(s) 30, 40, 54, 57, 555, 1558, 2665, 2762
Sau96I GGNCC 8 cut(s) 420, 683, 830, 1598, 1889, 1999, 2195, 3094
SchI GAGTC 6 cut(s) 225, 240, 1836, 2235, 2448, 2935
ScrFI CCNGG 4 cut(s) 26, 170, 2319, 2720
SduI GDGCHC 3 cut(s) 205, 1188, 2890
SfaNI GCATC 3 cut(s) 2261, 2325, 2801
SfcI CTRYAG 3 cut(s) 1988, 2665, 2762
SfuI TTCGAA 1 cut(s) 2231
SinI GGWCC 7 cut(s) 420, 830, 1598, 1889, 1999, 2195, 3094
SmiMI CAYNNNNRTG 2 cut(s) 844, 2820
SmlI CTYRAG 4 cut(s) 1163, 1322, 1552, 2141
SmoI CTYRAG 4 cut(s) 1163, 1322, 1552, 2141
SseBI AGGCCT 1 cut(s) 1161
SsiI CCGC 7 cut(s) 30, 355, 552, 912, 1212, 1773, 2193
SspI AATATT 4 cut(s) 801, 919, 1093, 2629
SspMI CTAG 7 cut(s) 36, 1181, 1296, 1505, 2289, 2870, 2957
SstI GAGCTC 1 cut(s) 1188
StuI AGGCCT 1 cut(s) 1161
StyD4I CCNGG 4 cut(s) 24, 168, 2317, 2718
StyI CCWWGG 3 cut(s) 48, 1045, 2236
TaaI ACNGT 2 cut(s) 326, 2535
TaiI ACGT 1 cut(s) 1487
TaqI TCGA 8 cut(s) 214, 507, 579, 1500, 2060, 2231, 2638, 3008
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 7 cut(s) 1729, 1813, 2110, 2126, 2475, 2933, 3067
TscAI CASTG 2 cut(s) 487, 2674
TseFI GTSAC 3 cut(s) 190, 1485, 2328
TseI GCWGC 7 cut(s) 39, 53, 56, 554, 1557, 2664, 2761
Tsp45I GTSAC 3 cut(s) 190, 1485, 2328
TspDTI ATGAA 8 cut(s) 273, 861, 902, 1602, 1743, 2252, 2692, 3093
TspGWI ACGGA 1 cut(s) 396
TspRI CASTG 2 cut(s) 487, 2674
Van91I CCANNNNNTGG 2 cut(s) 1642, 2987
VneI GTGCAC 2 cut(s) 201, 2886
VpaK11BI GGWCC 7 cut(s) 420, 830, 1598, 1889, 1999, 2195, 3094
XapI RAATTY 9 cut(s) 1027, 1421, 1474, 1638, 1993, 2072, 2152, 2181, 2915
XceI RCATGY 2 cut(s) 2761, 2894
XcmI CCANNNNNNNNNTGG 2 cut(s) 1833, 2243
XmiI GTMKAC 1 cut(s) 1966
XmnI GAANNNNTTC 1 cut(s) 3004
XspI CTAG 7 cut(s) 36, 1181, 1296, 1505, 2289, 2870, 2957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.