RchiOBHm_Chr5g0011261

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
7465164 .. 7468383
3220 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29195

Sequence Viewer

Length: 2460 bp
ATGCAATACAATGGCCTAAAAGGGCGTGTTCCTTTGGTTTTCTTCAACATGTCTTCTTTGACTATTTTGGGCCTTTCAGGAAACAGTTTCAGTGGTCGTCTTCCTGACAATATATGTCAGAATCTTCCTAGTATTCAAAGGTTGTACTTTTCTATCAACCAGTTTGATGGTCCACTTCCATCCCAATTATGGCAATGCAAACAGCTTCTTGTATTGTCATTATCTGTTAACAATTTCAGTGGAAGTATACCCAGAAATATTGGCAACTTGACTAAGTTACAGAAGATTTATCTAGACTTCAACAATTTGACAGGTACTATTCCGCATGAGATTGGCTATCTTCAAAATTTAGAGATATTGTCACTCCTTGCTAACTCATTTTCTGGGTCCATTCCTACCACACTCTGTGCCTTAACAGAACTCCTGTCACTTAACTTGGGCAAGAATAAGTTAACCATTGATACTTCTACTCCAGAAGCCAACATTTTCTCTTGTTTGGCCAATCTTAAAAATTTGTGGAGATTAAATTTGTCAAGCAATCCATTATATGCCACGCTTCCTGTTTCCCTCAAGAACTTCTCTACATCCCTTCAATATCTGGGTATGAGCAGTTGCAACATAGGGGGTAACATTCCCAACGGTATTGGCAACTTGAGCAACTTGACAGTCTTAGACTTGGGATACAATCAACTGGGTGGATCAATTCCAACTACAATGGGAAGACTACAGAACCTCCAAGGTTTGTACTTGACTGATAACAAATTGCAAGGATTTATTCCGGATGAACTTTGTCAACTAAACAATCTAGTTGACTTAGTTTTGGGTGGTAATCAACTTTCTGGTTCTGTACCTTCCTGCTTGGGTAATCTAACAGCTCTAAGAACTCTGTCATTAGGGTCCAATTCTTTAACTTCAACAGTACCATCTGCAGTGTGGGGACTTACATATGTCTTACACATAAACTTGTCATCCAATTCTCTACTTGGTCCTATCTCAGCAGATGTTGGAAATTTAAGAGTTGTCACAAATATAGATTTGTCAAGGAACAACTTTTCAGGTACTATACCAAGCAACATTGGGTCGCTTGAAAACTTGGTTAATCTCTCCTTGGCAAATAACAATCTCGAAGGCCCAATTCCCAGTTCATTTGGCAACTTAGGAAGCCTGGAGCTCTTGGATCTATCCAGAAACAATCTATCTGGAATCATTCCAGATTCTTTACAAGCGCTCTTGCATCTCAGGTATCTGAATTTGTCTTTCAACAAACTCCATGGAGAAATTCCAACAGGTGGACCTTTCAAAAACTTCTCTGTTCAGTCATTTCTCTCAAATGATGGACTATGTGGTGCATCCCAGCTTGATTTTCGACCATGCAGAACCCCTGTACAATATTCAAGGACAGCTAGTTCATCTATGTTGAAATATATTATTCCAGGGATGTTGGCAGCAATGCTTGTATTGACCTTCATATGGTTGTTCACACTACACAAAAAAGGGGATGCAGAGGTTGCAACAGAGCATACCTTAATACCTGAGCTTCTTCGGAAAAAAGTTACATACCAAGAAATTCTAACTGCTACAAATGGCTTCAATGAAACCAACTTACTTGGCTCTGGGGGATTTGGCTCAGTGTATAAAGGAATACTTTCAAATGGGATAGCGGTTGCTATAAAGGTGTTCAATTTACAACATGAAGAGGCTTTCAAAAAATTTGATGTTGAAAGTGAACTGCTAAGCAATGTTTGTCATCACAATCTTATCAAAATCATCGGTAGTTGCAACCAAAGTCATTTCAAAGCCTTGGTACTTGACTACATGCCTAATGGGAGCCTCGAGAGGTTGCTGTATTCTGAAGAATACTGTTCTTTGAAAATCCTAGAGAGGTTGAACATAATGATAGATGTTGCATCGGCGTTGGAATACCTTCATCATGGTTATTCAATACCAATTGTCCATTGTGATTTGAAGCCAAGCAATATACTACTAGACAATGATATGGTTGCACATGTTGCTGATTTTGGCATTGCAAAACTCTTGGGTGGAGGGGATACTGTGACCGAAACCCTGACACTAGCTACGGTTGGGTATATGGCTCCAGAATATGGAATAGAAGGAATAGTTACCAGAAAAGGGGATGTGTACAGTTTTGGTATAGTATTAATGGAGACTTTCACAAAAAAGAAGCCTACAGATGAGATATTTGTTGGGGAAATGAGTTTAAAGCGATGGGTTGCAGATTCGTTACTTTCAGATGCAGTACTTGAAGTTGTGGATGGCAGTTTACTTGGGAAAGACGAAGATCATGATTTTGTGAATAAGAGGGATTGTTTATCTTCCATTATGAGGTTGGCACTAGATTGTTCTGCAGAATCAGTTGAAGAGAGGGTAAGTATGCAAGATGCAGCAGTCACACTCCATAAAATCAAGAACAATTTTTTGAAGGACATTGGAGGTGTGTGA

Protein Analysis

819

Amino Acids

89.16

Weight (kDa)

5.77

Isoelectric Point (pI)

34.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 196 - 300 2e-11 Leucine-rich repeat region
LRR_8 PF13855 219 - 279 2.6e-09 Leucine rich repeat
LRR_14 PF23598 329 - 423 8.9e-08 Leucine-rich repeat region
LRR_8 PF13855 364 - 423 1.9e-10 Leucine rich repeat
Pkinase PF00069 531 - 800 8.3e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 534 - 800 9.6e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1289, 2102
AccI GTMKAC 1 cut(s) 247
AccIII TCCGGA 1 cut(s) 778
AciI CCGC 2 cut(s) 323, 1661
AclWI GGATC 2 cut(s) 706, 1185
AcoI YGGCCR 1 cut(s) 498
AcsI RAATTY 8 cut(s) 346, 511, 526, 1009, 1249, 1278, 1566, 1709
AcuI CTGAAG 1 cut(s) 1872
AdeI CACNNNGTG 1 cut(s) 407
AfeI AGCGCT 1 cut(s) 1227
AfiI CCNNNNNNNGG 6 cut(s) 189, 1289, 1470, 2102, 2130, 2343
AflIII ACRYGT 2 cut(s) 48, 2005
AjnI CCWGG 2 cut(s) 1164, 1432
AjuI GAANNNNNNNTTGG 2 cut(s) 1126, 1158
AloI GAACNNNNNNTCC 2 cut(s) 1390, 1422
AluBI AGCT 7 cut(s) 205, 875, 1171, 1357, 1403, 1537, 2075
AluI AGCT 7 cut(s) 205, 875, 1171, 1357, 1403, 1537, 2075
Alw21I GWGCWC 1 cut(s) 1173
Alw26I GTCTC 1 cut(s) 2159
AlwI GGATC 2 cut(s) 706, 1185
Ama87I CYCGRG 1 cut(s) 1832
Aor13HI TCCGGA 1 cut(s) 778
Aor51HI AGCGCT 1 cut(s) 1227
AoxI GGCC 4 cut(s) 13, 70, 498, 1129
ApeKI GCWGC 2 cut(s) 1445, 2402
ApoI RAATTY 8 cut(s) 346, 511, 526, 1009, 1249, 1278, 1566, 1709
AseI ATTAAT 1 cut(s) 2159
Asp700I GAANNNNTTC 2 cut(s) 1645, 1923
AspLEI GCGC 1 cut(s) 1228
AspS9I GGNCC 7 cut(s) 70, 170, 387, 897, 986, 1130, 1292
AvaI CYCGRG 1 cut(s) 1832
AvaII GGWCC 5 cut(s) 170, 387, 897, 986, 1292
BalI TGGCCA 1 cut(s) 500
BanII GRGCYC 1 cut(s) 1173
BbsI GAAGAC 3 cut(s) 45, 92, 727
Bbv12I GWGCWC 1 cut(s) 1173
BbvI GCAGC 2 cut(s) 1457, 2414
BccI CCATC 6 cut(s) 161, 187, 931, 1328, 2220, 2267
BciT130I CCWGG 2 cut(s) 1166, 1434
BciVI GTATCC 2 cut(s) 674, 2041
BcoDI GTCTC 1 cut(s) 2159
BfaI CTAG 8 cut(s) 129, 293, 806, 1404, 1877, 1985, 2072, 2354
BfmI CTRYAG 4 cut(s) 725, 927, 2187, 2364
BfoI RGCGCY 1 cut(s) 1229
BfuI GTATCC 2 cut(s) 674, 2041
BisI GCNGC 2 cut(s) 1446, 2403
BlpI GCTNAGC 1 cut(s) 1733
BlsI GCNGC 2 cut(s) 1447, 2404
BmcAI AGTACT 1 cut(s) 2259
Bme1390I CCNGG 2 cut(s) 1166, 1434
Bme18I GGWCC 5 cut(s) 170, 387, 897, 986, 1292
BmeT110I CYCGRG 1 cut(s) 1832
BmgT120I GGNCC 7 cut(s) 70, 170, 387, 897, 986, 1130, 1292
BmiI GGNNCC 4 cut(s) 388, 898, 1829, 2094
BmrFI CCNGG 2 cut(s) 1166, 1434
BmrI ACTGGG 2 cut(s) 701, 1134
BmsI GCATC 6 cut(s) 1243, 1358, 1489, 1916, 2242, 2389
BmuI ACTGGG 2 cut(s) 701, 1134
BpiI GAAGAC 3 cut(s) 45, 92, 727
BpmI CTGGAG 3 cut(s) 456, 1187, 2079
Bpu10I CCTNAGC 1 cut(s) 1533
Bpu1102I GCTNAGC 1 cut(s) 1733
BpuEI CTTGAG 2 cut(s) 554, 673
BsaJI CCNNGG 5 cut(s) 736, 1107, 1270, 1433, 1800
BsaWI WCCGGW 1 cut(s) 778
BsaXI ACNNNNNCTCC 4 cut(s) 454, 484, 717, 747
Bsc4I CCNNNNNNNGG 6 cut(s) 189, 1289, 1470, 2102, 2130, 2343
Bse1I ACTGG 3 cut(s) 160, 696, 1140
Bse3DI GCAATG 4 cut(s) 200, 1455, 1744, 2022
BseAI TCCGGA 1 cut(s) 778
BseBI CCWGG 2 cut(s) 1166, 1434
BseDI CCNNGG 5 cut(s) 736, 1107, 1270, 1433, 1800
BseGI GGATG 9 cut(s) 179, 584, 787, 968, 1349, 1443, 1504, 2140, 2278
BseLI CCNNNNNNNGG 6 cut(s) 189, 1289, 1470, 2102, 2130, 2343
BseMI GCAATG 4 cut(s) 200, 1455, 1744, 2022
BseMII CTCAG 4 cut(s) 1008, 1252, 1524, 1641
BseNI ACTGG 3 cut(s) 160, 696, 1140
BseXI GCAGC 2 cut(s) 1457, 2414
BseYI CCCAGC 1 cut(s) 1353
BshFI GGCC 4 cut(s) 15, 72, 500, 1131
BsiHKAI GWGCWC 1 cut(s) 1173
BsiHKCI CYCGRG 1 cut(s) 1832
BsiSI CCGG 1 cut(s) 779
BslFI GGGAC 1 cut(s) 951
BslI CCNNNNNNNGG 6 cut(s) 189, 1289, 1470, 2102, 2130, 2343
BsmAI GTCTC 1 cut(s) 2159
BsmFI GGGAC 1 cut(s) 951
BsnI GGCC 4 cut(s) 15, 72, 500, 1131
BsoBI CYCGRG 1 cut(s) 1832
Bsp1286I GDGCHC 1 cut(s) 1173
Bsp13I TCCGGA 1 cut(s) 778
Bsp1407I TGTACA 2 cut(s) 1384, 2139
Bsp143I GATC 3 cut(s) 698, 1177, 2299
Bsp1720I GCTNAGC 1 cut(s) 1733
Bsp19I CCATGG 1 cut(s) 1270
BspACI CCGC 2 cut(s) 323, 1661
BspANI GGCC 4 cut(s) 15, 72, 500, 1131
BspCNI CTCAG 4 cut(s) 1007, 1251, 1525, 1640
BspEI TCCGGA 1 cut(s) 778
BspHI TCATGA 1 cut(s) 2302
BspLI GGNNCC 4 cut(s) 388, 898, 1829, 2094
BspMAI CTGCAG 2 cut(s) 931, 2368
BspPI GGATC 2 cut(s) 706, 1185
BsrDI GCAATG 4 cut(s) 200, 1455, 1744, 2022
BsrGI TGTACA 2 cut(s) 1384, 2139
BsrI ACTGG 3 cut(s) 160, 696, 1140
BssECI CCNNGG 5 cut(s) 736, 1107, 1270, 1433, 1800
BssMI GATC 3 cut(s) 698, 1177, 2299
BssNAI GTATAC 1 cut(s) 248
BssT1I CCWWGG 4 cut(s) 736, 1107, 1270, 1800
Bst1107I GTATAC 1 cut(s) 248
Bst2UI CCWGG 2 cut(s) 1166, 1434
Bst4CI ACNGT 8 cut(s) 86, 641, 667, 919, 1862, 2053, 2080, 2144
Bst6I CTCTTC 2 cut(s) 1689, 2373
BstAPI GCANNNNNTGC 2 cut(s) 1508, 2009
BstAUI TGTACA 2 cut(s) 1384, 2139
BstDSI CCRYGG 1 cut(s) 1270
BstF5I GGATG 9 cut(s) 179, 584, 787, 968, 1349, 1443, 1504, 2140, 2278
BstH2I RGCGCY 1 cut(s) 1229
BstHHI GCGC 1 cut(s) 1228
BstKTI GATC 3 cut(s) 701, 1180, 2302
BstMAI GTCTC 1 cut(s) 2159
BstMBI GATC 3 cut(s) 698, 1177, 2299
BstMWI GCNNNNNNNGC 3 cut(s) 654, 1508, 2009
BstNI CCWGG 2 cut(s) 1166, 1434
BstNSI RCATGY 3 cut(s) 52, 1819, 2009
BstSCI CCNGG 2 cut(s) 1164, 1432
BstSFI CTRYAG 4 cut(s) 725, 927, 2187, 2364
BstV1I GCAGC 2 cut(s) 1457, 2414
BstV2I GAAGAC 3 cut(s) 45, 92, 727
BstX2I RGATCY 1 cut(s) 1177
BstXI CCANNNNNNTGG 1 cut(s) 167
BstYI RGATCY 1 cut(s) 1177
BstZ17I GTATAC 1 cut(s) 248
BsuI GTATCC 2 cut(s) 674, 2041
BsuRI GGCC 4 cut(s) 15, 72, 500, 1131
BtgI CCRYGG 1 cut(s) 1270
BtgZI GCGATG 1 cut(s) 2239
BtsCI GGATG 9 cut(s) 179, 584, 787, 968, 1349, 1443, 1504, 2140, 2278
BtsI GCAGTG 1 cut(s) 936
BtsIMutI CAGTG 4 cut(s) 97, 244, 936, 1635
CciI TCATGA 1 cut(s) 2302
CfoI GCGC 1 cut(s) 1228
Cfr13I GGNCC 7 cut(s) 70, 170, 387, 897, 986, 1130, 1292
CspCI CAANNNNNGTGG 2 cut(s) 220, 255
CviAII CATG 9 cut(s) 49, 326, 1271, 1371, 1691, 1816, 1931, 2006, 2303
DpnI GATC 3 cut(s) 700, 1179, 2301
DpnII GATC 3 cut(s) 698, 1177, 2299
DraI TTTAAA 1 cut(s) 2220
DraIII CACNNNGTG 1 cut(s) 407
EaeI YGGCCR 1 cut(s) 498
Eam1104I CTCTTC 2 cut(s) 1689, 2373
EarI CTCTTC 2 cut(s) 1689, 2373
Ecl136II GAGCTC 1 cut(s) 1171
Eco130I CCWWGG 4 cut(s) 736, 1107, 1270, 1800
Eco24I GRGCYC 1 cut(s) 1173
Eco47I GGWCC 5 cut(s) 170, 387, 897, 986, 1292
Eco47III AGCGCT 1 cut(s) 1227
Eco53kI GAGCTC 1 cut(s) 1171
Eco57I CTGAAG 1 cut(s) 1872
Eco88I CYCGRG 1 cut(s) 1832
EcoICRI GAGCTC 1 cut(s) 1171
EcoRII CCWGG 2 cut(s) 1164, 1432
EcoT14I CCWWGG 4 cut(s) 736, 1107, 1270, 1800
EcoT38I GRGCYC 1 cut(s) 1173
ErhI CCWWGG 4 cut(s) 736, 1107, 1270, 1800
FaeI CATG 9 cut(s) 52, 329, 1274, 1374, 1694, 1819, 1934, 2009, 2306
FalI AAGNNNNNCTT 2 cut(s) 1629, 1661
FaqI GGGAC 1 cut(s) 951
FatI CATG 9 cut(s) 48, 325, 1270, 1370, 1690, 1815, 1930, 2005, 2302
FauNDI CATATG 2 cut(s) 946, 1469
FblI GTMKAC 1 cut(s) 247
Fnu4HI GCNGC 2 cut(s) 1446, 2403
FokI GGATG 9 cut(s) 166, 571, 794, 955, 1336, 1450, 1511, 2147, 2285
FriOI GRGCYC 1 cut(s) 1173
Fsp4HI GCNGC 2 cut(s) 1446, 2403
FspBI CTAG 8 cut(s) 129, 293, 806, 1404, 1877, 1985, 2072, 2354
GlaI GCGC 1 cut(s) 1227
GluI GCNGC 2 cut(s) 1446, 2403
GsaI CCCAGC 1 cut(s) 1357
GsuI CTGGAG 3 cut(s) 456, 1187, 2079
HaeII RGCGCY 1 cut(s) 1229
HaeIII GGCC 4 cut(s) 15, 72, 500, 1131
HapII CCGG 1 cut(s) 779
HhaI GCGC 1 cut(s) 1228
Hin1II CATG 9 cut(s) 52, 329, 1274, 1374, 1694, 1819, 1934, 2009, 2306
Hin6I GCGC 1 cut(s) 1226
HinP1I GCGC 1 cut(s) 1226
HincII GTYRAC 4 cut(s) 229, 453, 794, 811
HindII GTYRAC 4 cut(s) 229, 453, 794, 811
HinfI GANTC 5 cut(s) 121, 1203, 1214, 2237, 2369
HpaI GTTAAC 2 cut(s) 229, 453
HpaII CCGG 1 cut(s) 779
Hpy188I TCNGA 5 cut(s) 120, 1248, 1545, 1852, 2251
HpyAV CCTTC 7 cut(s) 599, 861, 1121, 1474, 1934, 2105, 2434
HpyCH4III ACNGT 8 cut(s) 86, 641, 667, 919, 1862, 2053, 2080, 2144
HpyF10VI GCNNNNNNNGC 3 cut(s) 654, 1508, 2009
Hsp92II CATG 9 cut(s) 52, 329, 1274, 1374, 1694, 1819, 1934, 2009, 2306
HspAI GCGC 1 cut(s) 1226
Kpn2I TCCGGA 1 cut(s) 778
KspAI GTTAAC 2 cut(s) 229, 453
Kzo9I GATC 3 cut(s) 698, 1177, 2299
LmnI GCTCC 3 cut(s) 1168, 1827, 2098
Lsp1109I GCAGC 2 cut(s) 1457, 2414
LweI GCATC 6 cut(s) 1243, 1358, 1489, 1916, 2242, 2389
MaeI CTAG 8 cut(s) 129, 293, 806, 1404, 1877, 1985, 2072, 2354
MalI GATC 3 cut(s) 700, 1179, 2301
MboI GATC 3 cut(s) 698, 1177, 2299
MfeI CAATTG 1 cut(s) 1947
MflI RGATCY 1 cut(s) 1177
MhlI GDGCHC 1 cut(s) 1173
MlsI TGGCCA 1 cut(s) 500
MluNI TGGCCA 1 cut(s) 500
MmeI TCCRAC 4 cut(s) 731, 985, 1307, 1896
Mox20I TGGCCA 1 cut(s) 500
MroI TCCGGA 1 cut(s) 778
MroXI GAANNNNTTC 2 cut(s) 1645, 1923
MscI TGGCCA 1 cut(s) 500
Msp20I TGGCCA 1 cut(s) 500
MspI CCGG 1 cut(s) 779
MspR9I CCNGG 2 cut(s) 1166, 1434
MunI CAATTG 1 cut(s) 1947
MvaI CCWGG 2 cut(s) 1166, 1434
MwoI GCNNNNNNNGC 3 cut(s) 654, 1508, 2009
NcoI CCATGG 1 cut(s) 1270
NdeI CATATG 2 cut(s) 946, 1469
NdeII GATC 3 cut(s) 698, 1177, 2299
NlaIII CATG 9 cut(s) 52, 329, 1274, 1374, 1694, 1819, 1934, 2009, 2306
NlaIV GGNNCC 4 cut(s) 388, 898, 1829, 2094
NmuCI GTSAC 5 cut(s) 360, 426, 1021, 2053, 2407
NspI RCATGY 3 cut(s) 52, 1819, 2009
PaeR7I CTCGAG 1 cut(s) 1832
PagI TCATGA 1 cut(s) 2302
PciI ACATGT 2 cut(s) 48, 2005
PdmI GAANNNNTTC 2 cut(s) 1645, 1923
PfeI GAWTC 5 cut(s) 121, 1203, 1214, 2237, 2369
PflMI CCANNNNNTGG 2 cut(s) 1289, 2102
PkrI GCNGC 2 cut(s) 1447, 2404
PscI ACATGT 2 cut(s) 48, 2005
PshBI ATTAAT 1 cut(s) 2159
Psp124BI GAGCTC 1 cut(s) 1173
Psp6I CCWGG 2 cut(s) 1164, 1432
PspFI CCCAGC 1 cut(s) 1353
PspGI CCWGG 2 cut(s) 1164, 1432
PspN4I GGNNCC 4 cut(s) 388, 898, 1829, 2094
PspPI GGNCC 7 cut(s) 70, 170, 387, 897, 986, 1130, 1292
PstI CTGCAG 2 cut(s) 931, 2368
PsuI RGATCY 1 cut(s) 1177
SacI GAGCTC 1 cut(s) 1173
SatI GCNGC 2 cut(s) 1446, 2403
Sau3AI GATC 3 cut(s) 698, 1177, 2299
Sau96I GGNCC 7 cut(s) 70, 170, 387, 897, 986, 1130, 1292
ScaI AGTACT 1 cut(s) 2259
ScrFI CCNGG 2 cut(s) 1166, 1434
SduI GDGCHC 1 cut(s) 1173
SfaNI GCATC 6 cut(s) 1243, 1358, 1489, 1916, 2242, 2389
SfcI CTRYAG 4 cut(s) 725, 927, 2187, 2364
Sfr274I CTCGAG 1 cut(s) 1832
SinI GGWCC 5 cut(s) 170, 387, 897, 986, 1292
SlaI CTCGAG 1 cut(s) 1832
SmlI CTYRAG 3 cut(s) 569, 652, 1832
SmoI CTYRAG 3 cut(s) 569, 652, 1832
SsiI CCGC 2 cut(s) 323, 1661
SspI AATATT 2 cut(s) 259, 1391
SspMI CTAG 8 cut(s) 129, 293, 806, 1404, 1877, 1985, 2072, 2354
SstI GAGCTC 1 cut(s) 1173
StyD4I CCNGG 2 cut(s) 1164, 1432
StyI CCWWGG 4 cut(s) 736, 1107, 1270, 1800
TaaI ACNGT 8 cut(s) 86, 641, 667, 919, 1862, 2053, 2080, 2144
TaqI TCGA 3 cut(s) 1125, 1366, 1833
TaqII GACCGA 1 cut(s) 2072
TatI WGTACW 5 cut(s) 144, 744, 1384, 2139, 2257
TfiI GAWTC 5 cut(s) 121, 1203, 1214, 2237, 2369
TscAI CASTG 4 cut(s) 97, 244, 936, 1635
TseFI GTSAC 5 cut(s) 360, 426, 1021, 2053, 2407
TseI GCWGC 2 cut(s) 1445, 2402
Tsp45I GTSAC 5 cut(s) 360, 426, 1021, 2053, 2407
TspDTI ATGAA 7 cut(s) 798, 1134, 1398, 1456, 1608, 1707, 1916
TspRI CASTG 4 cut(s) 97, 244, 936, 1635
Van91I CCANNNNNTGG 2 cut(s) 1289, 2102
VpaK11BI GGWCC 5 cut(s) 170, 387, 897, 986, 1292
VspI ATTAAT 1 cut(s) 2159
XapI RAATTY 8 cut(s) 346, 511, 526, 1009, 1249, 1278, 1566, 1709
XbaI TCTAGA 1 cut(s) 292
XceI RCATGY 3 cut(s) 52, 1819, 2009
XcmI CCANNNNNNNNNTGG 3 cut(s) 186, 930, 2344
XhoI CTCGAG 1 cut(s) 1832
XmiI GTMKAC 1 cut(s) 247
XmnI GAANNNNTTC 2 cut(s) 1645, 1923
XspI CTAG 8 cut(s) 129, 293, 806, 1404, 1877, 1985, 2072, 2354
ZrmI AGTACT 1 cut(s) 2259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.