RchiOBHm_Chr2g0113631

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000058
Physical Location & Seq
Reverse (-)
25762310 .. 25766958
4649 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48697

Sequence Viewer

Length: 3369 bp
ATGGAGAGAGTTACTTGGTTCTTCCAGGTATACTTATTATGTTGTACAACGGTTAGCTTCTTAACTATGGCAGCACGAACCAACCTTAACATCACCACAGACCGATCTGCTCTTCTTTCTCTCAAAGCCCATATCATCAGTGACCCTCAAAACAAGATCTTTACCAATTGGTCAACCACTACCCCTGTTTGCAACTGGGTTGGTGTCATTTGTGGTGCACGTCATCCTCGAGTCGCAGAGTTGAACCTCTCTTACTTTGGTCTCGCGGGCACCATTCCTCCTGAGCTAGGCAACTTATCATTGCTTGTTGATTTGGATATCCAAAATAACAGTTTCCAGGGTACTTTGCCTAAGGAATTAGCTCGCCTGCGTCGGTTGAAGTTTATTAACTTGGGATACAACAAGTTTATGGGAGTGATTCCGTCATGGTTTGGGTCCTTGTCCAAACTTCAAGGTTTCAGGTTGTTTGGTAATCAATTTTCAGGTTCCATACCAGCTACCATCTTCAACTTATCTGCTTTGCAAGTAATTGATCTGGATTATAACCAACTCTCAGGTAGAATTTCTGGAGAAATCGGGAACCTAACAACATTGAAGGAGATCTACCTTGATCGTAATAATTTTGAAGAAATTCCAAAAGAGATCGGCACTTTGAATCAGTTGGAAAACTTGGTGGTGCAAGAAAATGCCTTAAAAGGCCGTATTCCTATGGCTGTCTTCAACATGTCTTCTTTGACTGTTTTAACTTTCTATGGGAACAACTTGATTGGTAGAATTCCGGACAATATATGTCAACATCTTCCTAATATTCAAATTTTGTATTTGGGTAAAAATCAGTTCAATGGCCCACTTCCTTCCACATTTGGGCAATGCAAACACCTTCTTGAATTAAACTTGGAGGTTAACAGGTTGAGTGGAAGAATACCCAAAAATATTGGAAATTTAACCCAGATAAAGATGCTTAGCTTTACCACAAACAGCTTGACAGGTACTATACCATATGAGATTGGTTATCTTCCAAATCTAGAGCGATTGGGGCTCCGTGGTAATAATCTAAATGGTCATATCCCATCCTCAATCTTCAATATGTCCACAATAACAAAATTAGATCTCGGCTTCAATCAGCTTTCAGGTAGCCTCCCAGCAAACATAGGCATTGGGCTTCCAAAACTAGAAGAGTTTGAACTAGGAGTGAATCACCTCAGTGGAGTAATCCCTAAATCCATCTCCAATGCTTCTGAGATTCGGATTCTAGACCGGGGAGGTAACTCTATTTCTGGATTTATTCCAACCAGTCTATGCCTCTTGACAAACCTTGAAGGCCTCAGCTTCTATGGTAATAATTTGGCCATTGATACCTCTACTCCAGAAGTTAATATTTTGTCTTGTTTGGCAAATTTCAAAAATTTGAGGTATTTATCCTTCACAAGCAATCCATTGAATGCCAAGCTTTCAATTTCCTTCAACAATTTCTCTGCATCACTTCAATATATTTATTTAGGAAATTGCATCTTGAGTGGTACCATCCCCAGTGATATAGGCAATTTCAGTAGCTTGATATCGTTATCCCTATTTATGAATCAATTGAGTGGGCCAATTCCAGGCTCAATGGGAAGACTACATAATCTTCAAGGTTTGTATATGTATGATAACACATTGCAAGGACACATTCCAGATGAACTTTGTCAATTCAAAAACTTAGCTGATTTATATTTGGGTGGGAATCAACTGTCTAGTTCTGTACCTTCCCGCTTGGGTAATCTAACAGCATCTCTAAGACGTCTATCCTTAGGGTCCAATTCGTTGAATTCCACAATACCATCTACCTTGTGGGGACTTACAGATATCTTGGAACTAGACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGGTGGTGTTGGTAATTTGAAAGTTGCTACATCCATAGATGTATCATACAACCAATTATCTGGTAGTATACCAAGCAGCGTTGGGAGTTTATCGAATTTGGTCAATCTCTCCTTGGCACATAATAATCTAGAAGGCCCTATTCCTAGTTCCTTTGCAACCTGTGTAAGCTTAGAACGATTGGATTTATCTCATAACAGTCTTTCTGGAGTGATTCCAAAGTCTCTAGAAGCACTCTCATATCTCAAGTATCTGAATTTGTCTCTCAACATACTCCAAGGAGAAATTCCAACCGGTGGTCCTTTCAAAAACTTCTCTGCTGAATCATTTATTTCAAACCATGGACTCTGTGGGGCATCCCAATTTCAAGTTCCACCATGCAAAAGAAAAACTAGTATGTCTATCTTGAAATATGTTATTCCGGGGATCTTGTCAGCAATGCTTCTAACGACCTCCATATTTTGGATGTTGATGTTCCGCAGACAAAAGAATGCGAAAGCTGCAGCACATACTATCTTAACGCCTCAAGTTTTATGGAGAAGAGTTTCATACTTAGAGCTCCTAAGTGCGACAAATGGATTCAATGAAAGAAACTTACTTGGTACTGGGGGTTTTGGCTCAGTATATAAAGGAACATTGTCAGATGGGATAGACGTTGCGATAAAGGTTTTCAATTTGGAGTTAGAAAGGGCATTTACAAGTTTTGAGGTTGAATGTGAAGTGCTAAGTAACGTTCGTCACCGAAATCTTGTCAAAGTCATCAGTTGCTGCAGTCAAATTGATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTACTCTCAGAATTCCTCTTTGAACATAATGCAAAGGTTGGATATAATGATAGATGTTGCATCGGCATTAGAGTACCTTCATCATGGTTATGAAGTACCTATTGTCCATTGTGATTTGAAGCCAAGCAACATCCTACTAGATGATGACATGGCTGCACATGTTGCTGATTTTGGTATTGCAAAACTCTTGGGTGGAGGAGATTCTATAACTCAAACCATGACTCTAGCCACAATTGGGTATATTGCTCCAGAGTATGGAATGGAAGGAACAGTGACAAGAAGAGGGGATGTGTATAGTTTTGGTATTGTAGTGATGGAAACATTCACAAGAAGGAAGCCAACCGATGAGATCTTCGTTGGAGAAATGAGACTAAATCAATGGGTTGCAAATTTCCTAATTGCAGATGCGATAGTTGAAGTTGTGGATGCTACCTTACTTGGAACCGAGGAGGATCATGACTTCGTGAGCAAGAGGGAGTGCTTATCATCTATTATGAGATTAGCTGTTGCTTGTTCAGCAGAATCACTGGAAGAGAGGATAAACATGGAAGAGGCTGTAGCCATGTTGAAAACAATCAAGATCAAGTTTTCAAAGGACTCTGCTGCAAGAGGTGTGGTGTTGAACAGTCATTCTGTTTCGTAA

Protein Analysis

1122

Amino Acids

122.96

Weight (kDa)

6.57

Isoelectric Point (pI)

30.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 6.3e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 82 - 180 1.2e-06 Leucine-rich repeat region
LRR_14 PF23598 168 - 251 9.1e-09 Leucine-rich repeat region
LRR_14 PF23598 335 - 524 1.8e-06 Leucine-rich repeat region
LRR_14 PF23598 454 - 622 8.5e-08 Leucine-rich repeat region
LRR_8 PF13855 662 - 720 1.2e-08 Leucine rich repeat
Pkinase PF00069 825 - 1095 1.5e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 828 - 1096 7.5e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
AatII GACGTC 1 cut(s) 1783
Acc65I GGTACC 1 cut(s) 1520
AccB1I GGYRCC 2 cut(s) 269, 1520
AccB7I CCANNNNNTGG 3 cut(s) 2186, 2352, 2981
AccI GTMKAC 2 cut(s) 30, 1960
AccII CGCG 1 cut(s) 266
AccIII TCCGGA 1 cut(s) 778
AciI CCGC 3 cut(s) 266, 1750, 2368
AclI AACGTT 1 cut(s) 2622
AclWI GGATC 2 cut(s) 2324, 3186
AcoI YGGCCR 1 cut(s) 1347
AcyI GRCGYC 1 cut(s) 1780
AfaI GTAC 9 cut(s) 46, 343, 991, 1522, 1743, 2494, 2729, 2801, 2823
AfiI CCNNNNNNNGG 8 cut(s) 287, 864, 1601, 1892, 2186, 2352, 2961, 2981
AflIII ACRYGT 2 cut(s) 723, 2884
AgeI ACCGGT 1 cut(s) 2183
AhlI ACTAGT 1 cut(s) 2282
AjiI CACGTC 1 cut(s) 221
AjnI CCWGG 3 cut(s) 24, 336, 1600
AjuI GAANNNNNNNTTGG 4 cut(s) 2160, 2192, 2244, 2276
AleI CACNNNNGTG 1 cut(s) 1203
Alw21I GWGCWC 2 cut(s) 220, 2451
Alw26I GTCTC 4 cut(s) 266, 2118, 2157, 3088
Alw44I GTGCAC 1 cut(s) 216
AlwI GGATC 2 cut(s) 2324, 3186
AlwNI CAGNNNCTG 1 cut(s) 2658
Ama87I CYCGRG 1 cut(s) 228
Aor13HI TCCGGA 1 cut(s) 778
AoxI GGCC 6 cut(s) 697, 844, 1321, 1347, 1592, 2026
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 7 cut(s) 71, 1968, 2390, 2393, 2658, 2879, 3329
AsiGI ACCGGT 1 cut(s) 2183
Asp700I GAANNNNTTC 2 cut(s) 630, 2434
Asp718I GGTACC 1 cut(s) 1520
AspS9I GGNCC 7 cut(s) 435, 845, 1592, 1794, 1883, 2027, 2189
AsuC2I CCSGG 2 cut(s) 1259, 2313
AsuHPI GGTGA 3 cut(s) 85, 1190, 2621
AvaI CYCGRG 1 cut(s) 228
AvaII GGWCC 4 cut(s) 435, 1794, 1883, 2189
AxyI CCTNAGG 2 cut(s) 351, 1789
BaeGI GKGCMC 2 cut(s) 220, 272
BalI TGGCCA 1 cut(s) 1349
BanI GGYRCC 2 cut(s) 269, 1520
BanII GRGCYC 2 cut(s) 1041, 2451
BarI GAAGNNNNNNTAC 6 cut(s) 587, 619, 1406, 1438, 2711, 2743
BbsI GAAGAC 3 cut(s) 709, 720, 1621
Bbv12I GWGCWC 2 cut(s) 220, 2451
BbvCI CCTCAGC 1 cut(s) 1325
BbvI GCAGC 7 cut(s) 83, 1980, 2377, 2405, 2645, 2866, 3316
BccI CCATC 7 cut(s) 509, 1078, 1232, 1532, 1828, 2528, 3034
BceAI ACGGC 1 cut(s) 684
BciT130I CCWGG 3 cut(s) 26, 338, 1602
BciVI GTATCC 1 cut(s) 389
BcnI CCSGG 2 cut(s) 1259, 2313
BcoDI GTCTC 4 cut(s) 266, 2118, 2157, 3088
BcuI ACTAGT 1 cut(s) 2282
BfmI CTRYAG 3 cut(s) 2391, 2659, 3282
BfuI GTATCC 1 cut(s) 389
BglII AGATCT 4 cut(s) 156, 600, 1108, 3075
BisI GCNGC 7 cut(s) 72, 1969, 2391, 2394, 2659, 2880, 3330
BlpI GCTNAGC 1 cut(s) 962
BlsI GCNGC 7 cut(s) 73, 1970, 2392, 2395, 2660, 2881, 3331
Bme1390I CCNGG 5 cut(s) 26, 338, 1259, 1602, 2313
Bme18I GGWCC 4 cut(s) 435, 1794, 1883, 2189
BmeT110I CYCGRG 1 cut(s) 228
BmgBI CACGTC 1 cut(s) 221
BmgT120I GGNCC 7 cut(s) 435, 845, 1592, 1794, 1883, 2027, 2189
BmiI GGNNCC 9 cut(s) 271, 436, 487, 581, 1040, 1522, 1795, 2711, 3169
BmrFI CCNGG 5 cut(s) 26, 338, 1259, 1602, 2313
BmrI ACTGGG 3 cut(s) 205, 1524, 2505
BmsI GCATC 8 cut(s) 948, 1487, 1518, 1778, 2255, 2795, 3121, 3142
BmuI ACTGGG 3 cut(s) 205, 1524, 2505
BpiI GAAGAC 3 cut(s) 709, 720, 1621
BpmI CTGGAG 4 cut(s) 588, 1350, 2118, 2958
Bpu10I CCTNAGC 2 cut(s) 282, 1325
Bpu1102I GCTNAGC 1 cut(s) 962
BpuEI CTTGAG 4 cut(s) 1534, 2120, 2400, 2735
BpuMI CCSGG 2 cut(s) 1259, 2313
BsaHI GRCGYC 1 cut(s) 1780
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 8 cut(s) 337, 1042, 1258, 2004, 2167, 2230, 2312, 3171
BsaWI WCCGGW 2 cut(s) 778, 2183
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 1348, 1378
Bsc4I CCNNNNNNNGG 8 cut(s) 287, 864, 1601, 1892, 2186, 2352, 2961, 2981
Bse118I RCCGGY 1 cut(s) 2183
Bse1I ACTGG 5 cut(s) 200, 1293, 1530, 2500, 3258
Bse21I CCTNAGG 2 cut(s) 351, 1789
Bse3DI GCAATG 4 cut(s) 299, 875, 1655, 2334
BseAI TCCGGA 1 cut(s) 778
BseBI CCWGG 3 cut(s) 26, 338, 1602
BseDI CCNNGG 8 cut(s) 337, 1042, 1258, 2004, 2167, 2230, 2312, 3171
BseLI CCNNNNNNNGG 8 cut(s) 287, 864, 1601, 1892, 2186, 2352, 2961, 2981
BseMI GCAATG 4 cut(s) 299, 875, 1655, 2334
BseMII CTCAG 7 cut(s) 273, 567, 1216, 1230, 1339, 2523, 2747
BseNI ACTGG 5 cut(s) 200, 1293, 1530, 2500, 3258
BseRI GAGGAG 2 cut(s) 2937, 3188
BseSI GKGCMC 2 cut(s) 220, 272
BseXI GCAGC 7 cut(s) 83, 1980, 2377, 2405, 2645, 2866, 3316
BseYI CCCAGC 1 cut(s) 1141
BsgI GTGCAG 1 cut(s) 2865
Bsh1236I CGCG 1 cut(s) 266
BshFI GGCC 6 cut(s) 699, 846, 1323, 1349, 1594, 2028
BshNI GGYRCC 2 cut(s) 269, 1520
BshTI ACCGGT 1 cut(s) 2183
BsiHKAI GWGCWC 2 cut(s) 220, 2451
BsiHKCI CYCGRG 1 cut(s) 228
BsiSI CCGG 4 cut(s) 779, 1258, 2184, 2312
BslFI GGGAC 1 cut(s) 1848
BslI CCNNNNNNNGG 8 cut(s) 287, 864, 1601, 1892, 2186, 2352, 2961, 2981
BsmAI GTCTC 4 cut(s) 266, 2118, 2157, 3088
BsmFI GGGAC 1 cut(s) 1848
BsmI GAATGC 2 cut(s) 1447, 2386
BsnI GGCC 6 cut(s) 699, 846, 1323, 1349, 1594, 2028
Bso31I GGTCTC 1 cut(s) 266
BsoBI CYCGRG 1 cut(s) 228
Bsp1286I GDGCHC 4 cut(s) 220, 272, 1041, 2451
Bsp13I TCCGGA 1 cut(s) 778
Bsp1407I TGTACA 1 cut(s) 44
Bsp1720I GCTNAGC 1 cut(s) 962
Bsp19I CCATGG 1 cut(s) 2230
BspACI CCGC 3 cut(s) 266, 1750, 2368
BspANI GGCC 6 cut(s) 699, 846, 1323, 1349, 1594, 2028
BspCNI CTCAG 7 cut(s) 274, 566, 1215, 1231, 1338, 2522, 2746
BspEI TCCGGA 1 cut(s) 778
BspFNI CGCG 1 cut(s) 266
BspHI TCATGA 1 cut(s) 3181
BspLI GGNNCC 9 cut(s) 271, 436, 487, 581, 1040, 1522, 1795, 2711, 3169
BspMAI CTGCAG 2 cut(s) 2395, 2663
BspPI GGATC 2 cut(s) 2324, 3186
BspQI GCTCTTC 1 cut(s) 117
BspT107I GGYRCC 2 cut(s) 269, 1520
BspTNI GGTCTC 1 cut(s) 266
BsrDI GCAATG 4 cut(s) 299, 875, 1655, 2334
BsrFI RCCGGY 1 cut(s) 2183
BsrGI TGTACA 1 cut(s) 44
BsrI ACTGG 5 cut(s) 200, 1293, 1530, 2500, 3258
BssAI RCCGGY 1 cut(s) 2183
BssECI CCNNGG 8 cut(s) 337, 1042, 1258, 2004, 2167, 2230, 2312, 3171
BssNAI GTATAC 2 cut(s) 31, 1961
BssNI GRCGYC 1 cut(s) 1780
BssT1I CCWWGG 3 cut(s) 2004, 2167, 2230
Bst1107I GTATAC 2 cut(s) 31, 1961
Bst2UI CCWGG 3 cut(s) 26, 338, 1602
Bst4CI ACNGT 7 cut(s) 52, 332, 739, 1731, 2090, 2998, 3353
Bst6I CTCTTC 6 cut(s) 117, 1170, 2425, 3001, 3252, 3270
BstACI GRCGYC 1 cut(s) 1780
BstAPI GCANNNNNTGC 1 cut(s) 2888
BstAUI TGTACA 1 cut(s) 44
BstC8I GCNNGC 3 cut(s) 268, 364, 368
BstDSI CCRYGG 2 cut(s) 1042, 2230
BstENI CCTNNNNNAGG 2 cut(s) 285, 1890
BstFNI CGCG 1 cut(s) 266
BstMAI GTCTC 4 cut(s) 266, 2118, 2157, 3088
BstMWI GCNNNNNNNGC 4 cut(s) 1036, 2390, 2888, 3242
BstNI CCWGG 3 cut(s) 26, 338, 1602
BstNSI RCATGY 3 cut(s) 727, 2701, 2888
BstSCI CCNGG 5 cut(s) 24, 336, 1257, 1600, 2311
BstSFI CTRYAG 3 cut(s) 2391, 2659, 3282
BstSLI GKGCMC 2 cut(s) 220, 272
BstUI CGCG 1 cut(s) 266
BstV1I GCAGC 7 cut(s) 83, 1980, 2377, 2405, 2645, 2866, 3316
BstV2I GAAGAC 3 cut(s) 709, 720, 1621
BstX2I RGATCY 5 cut(s) 156, 600, 1108, 2316, 3075
BstXI CCANNNNNNTGG 1 cut(s) 1952
BstYI RGATCY 5 cut(s) 156, 600, 1108, 2316, 3075
BstZ17I GTATAC 2 cut(s) 31, 1961
Bsu36I CCTNAGG 2 cut(s) 351, 1789
BsuI GTATCC 1 cut(s) 389
BsuRI GGCC 6 cut(s) 699, 846, 1323, 1349, 1594, 2028
BtgI CCRYGG 2 cut(s) 1042, 2230
BtrI CACGTC 1 cut(s) 221
BtsIMutI CAGTG 5 cut(s) 145, 1210, 1537, 3003, 3251
Cac8I GCNNGC 3 cut(s) 268, 364, 368
CaiI CAGNNNCTG 1 cut(s) 2658
CciI TCATGA 1 cut(s) 3181
Cfr10I RCCGGY 1 cut(s) 2183
Cfr13I GGNCC 7 cut(s) 435, 845, 1592, 1794, 1883, 2027, 2189
CseI GACGC 1 cut(s) 359
Csp6I GTAC 9 cut(s) 45, 342, 990, 1521, 1742, 2493, 2728, 2800, 2822
CspAI ACCGGT 1 cut(s) 2183
CspCI CAANNNNNGTGG 2 cut(s) 3321, 3356
CviQI GTAC 9 cut(s) 45, 342, 990, 1521, 1742, 2493, 2728, 2800, 2822
EaeI YGGCCR 1 cut(s) 1347
Eam1104I CTCTTC 6 cut(s) 117, 1170, 2425, 3001, 3252, 3270
EarI CTCTTC 6 cut(s) 117, 1170, 2425, 3001, 3252, 3270
Ecl136II GAGCTC 1 cut(s) 2449
Eco130I CCWWGG 3 cut(s) 2004, 2167, 2230
Eco147I AGGCCT 1 cut(s) 1323
Eco24I GRGCYC 2 cut(s) 1041, 2451
Eco31I GGTCTC 1 cut(s) 266
Eco32I GATATC 3 cut(s) 319, 1560, 1846
Eco47I GGWCC 4 cut(s) 435, 1794, 1883, 2189
Eco53kI GAGCTC 1 cut(s) 2449
Eco81I CCTNAGG 2 cut(s) 351, 1789
Eco88I CYCGRG 1 cut(s) 228
EcoICRI GAGCTC 1 cut(s) 2449
EcoNI CCTNNNNNAGG 2 cut(s) 285, 1890
EcoO109I RGGNCCY 2 cut(s) 435, 2027
EcoRI GAATTC 3 cut(s) 774, 1807, 2737
EcoRII CCWGG 3 cut(s) 24, 336, 1600
EcoRV GATATC 3 cut(s) 319, 1560, 1846
EcoT14I CCWWGG 3 cut(s) 2004, 2167, 2230
EcoT38I GRGCYC 2 cut(s) 1041, 2451
ErhI CCWWGG 3 cut(s) 2004, 2167, 2230
FaqI GGGAC 1 cut(s) 1848
FauI CCCGC 2 cut(s) 259, 1757
FauNDI CATATG 1 cut(s) 1000
FblI GTMKAC 2 cut(s) 30, 1960
Fnu4HI GCNGC 7 cut(s) 72, 1969, 2391, 2394, 2659, 2880, 3330
FriOI GRGCYC 2 cut(s) 1041, 2451
Fsp4HI GCNGC 7 cut(s) 72, 1969, 2391, 2394, 2659, 2880, 3330
GluI GCNGC 7 cut(s) 72, 1969, 2391, 2394, 2659, 2880, 3330
GsaI CCCAGC 1 cut(s) 1145
GsuI CTGGAG 4 cut(s) 588, 1350, 2118, 2958
HaeIII GGCC 6 cut(s) 699, 846, 1323, 1349, 1594, 2028
HapII CCGG 4 cut(s) 779, 1258, 2184, 2312
HgaI GACGC 1 cut(s) 359
Hin1I GRCGYC 1 cut(s) 1780
HincII GTYRAC 3 cut(s) 174, 794, 904
HindII GTYRAC 3 cut(s) 174, 794, 904
HindIII AAGCTT 2 cut(s) 1448, 2059
HpaI GTTAAC 1 cut(s) 904
HpaII CCGG 4 cut(s) 779, 1258, 2184, 2312
HphI GGTGA 3 cut(s) 85, 1190, 2621
Hpy166II GTNNAC 7 cut(s) 31, 174, 218, 794, 904, 1092, 1961
Hpy188I TCNGA 5 cut(s) 1240, 1248, 2145, 2533, 2736
Hpy8I GTNNAC 7 cut(s) 31, 174, 218, 794, 904, 1092, 1961
Hpy99I CGWCG 1 cut(s) 375
HpyCH4III ACNGT 7 cut(s) 52, 332, 739, 1731, 2090, 2998, 3353
HpyCH4IV ACGT 4 cut(s) 220, 1780, 2544, 2622
HpyF10VI GCNNNNNNNGC 4 cut(s) 1036, 2390, 2888, 3242
HpySE526I ACGT 4 cut(s) 220, 1780, 2544, 2622
Hsp92I GRCGYC 1 cut(s) 1780
Kpn2I TCCGGA 1 cut(s) 778
KpnI GGTACC 1 cut(s) 1524
KspAI GTTAAC 1 cut(s) 904
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 4 cut(s) 1044, 2454, 2709, 2977
Lsp1109I GCAGC 7 cut(s) 83, 1980, 2377, 2405, 2645, 2866, 3316
LweI GCATC 8 cut(s) 948, 1487, 1518, 1778, 2255, 2795, 3121, 3142
MaeII ACGT 4 cut(s) 220, 1780, 2544, 2622
MaeIII GTNAC 6 cut(s) 10, 140, 1265, 2618, 2627, 2998
MfeI CAATTG 3 cut(s) 166, 1583, 2958
MflI RGATCY 5 cut(s) 156, 600, 1108, 2316, 3075
MhlI GDGCHC 4 cut(s) 220, 272, 1041, 2451
MlsI TGGCCA 1 cut(s) 1349
MluNI TGGCCA 1 cut(s) 1349
MlyI GAGTC 4 cut(s) 240, 2229, 2941, 3317
MmeI TCCRAC 5 cut(s) 642, 1313, 2204, 2745, 3064
Mox20I TGGCCA 1 cut(s) 1349
MroI TCCGGA 1 cut(s) 778
MroXI GAANNNNTTC 2 cut(s) 630, 2434
MscI TGGCCA 1 cut(s) 1349
MslI CAYNNNNRTG 2 cut(s) 1203, 2814
Msp20I TGGCCA 1 cut(s) 1349
MspI CCGG 4 cut(s) 779, 1258, 2184, 2312
MspR9I CCNGG 5 cut(s) 26, 338, 1259, 1602, 2313
MunI CAATTG 3 cut(s) 166, 1583, 2958
Mva1269I GAATGC 2 cut(s) 1447, 2386
MvaI CCWGG 3 cut(s) 26, 338, 1602
MvnI CGCG 1 cut(s) 266
MwoI GCNNNNNNNGC 4 cut(s) 1036, 2390, 2888, 3242
NciI CCSGG 2 cut(s) 1259, 2313
NcoI CCATGG 1 cut(s) 2230
NdeI CATATG 1 cut(s) 1000
NlaIV GGNNCC 9 cut(s) 271, 436, 487, 581, 1040, 1522, 1795, 2711, 3169
NmeAIII GCCGAG 1 cut(s) 1092
NmuCI GTSAC 3 cut(s) 140, 2627, 2998
NspI RCATGY 3 cut(s) 727, 2701, 2888
OliI CACNNNNGTG 1 cut(s) 1203
PaeR7I CTCGAG 1 cut(s) 228
PagI TCATGA 1 cut(s) 3181
PceI AGGCCT 1 cut(s) 1323
PciI ACATGT 2 cut(s) 723, 2884
PciSI GCTCTTC 1 cut(s) 117
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PctI GAATGC 2 cut(s) 1447, 2386
PdmI GAANNNNTTC 2 cut(s) 630, 2434
PflMI CCANNNNNTGG 3 cut(s) 2186, 2352, 2981
PinAI ACCGGT 1 cut(s) 2183
PkrI GCNGC 7 cut(s) 73, 1970, 2392, 2395, 2660, 2881, 3331
PleI GAGTC 4 cut(s) 239, 2229, 2941, 3317
PpsI GAGTC 4 cut(s) 239, 2229, 2941, 3317
PpuMI RGGWCCY 1 cut(s) 435
PscI ACATGT 2 cut(s) 723, 2884
PsiI TTATAA 1 cut(s) 543
Psp124BI GAGCTC 1 cut(s) 2451
Psp1406I AACGTT 1 cut(s) 2622
Psp5II RGGWCCY 1 cut(s) 435
Psp6I CCWGG 3 cut(s) 24, 336, 1600
PspFI CCCAGC 1 cut(s) 1141
PspGI CCWGG 3 cut(s) 24, 336, 1600
PspN4I GGNNCC 9 cut(s) 271, 436, 487, 581, 1040, 1522, 1795, 2711, 3169
PspPI GGNCC 7 cut(s) 435, 845, 1592, 1794, 1883, 2027, 2189
PspPPI RGGWCCY 1 cut(s) 435
PspXI VCTCGAGB 1 cut(s) 228
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstI CTGCAG 2 cut(s) 2395, 2663
PstNI CAGNNNCTG 1 cut(s) 2658
PsuI RGATCY 5 cut(s) 156, 600, 1108, 2316, 3075
RsaI GTAC 9 cut(s) 46, 343, 991, 1522, 1743, 2494, 2729, 2801, 2823
RsaNI GTAC 9 cut(s) 45, 342, 990, 1521, 1742, 2493, 2728, 2800, 2822
RseI CAYNNNNRTG 2 cut(s) 1203, 2814
SacI GAGCTC 1 cut(s) 2451
SapI GCTCTTC 1 cut(s) 117
SatI GCNGC 7 cut(s) 72, 1969, 2391, 2394, 2659, 2880, 3330
Sau96I GGNCC 7 cut(s) 435, 845, 1592, 1794, 1883, 2027, 2189
SchI GAGTC 4 cut(s) 240, 2229, 2941, 3317
ScrFI CCNGG 5 cut(s) 26, 338, 1259, 1602, 2313
SduI GDGCHC 4 cut(s) 220, 272, 1041, 2451
SfaNI GCATC 8 cut(s) 948, 1487, 1518, 1778, 2255, 2795, 3121, 3142
SfcI CTRYAG 3 cut(s) 2391, 2659, 3282
Sfr274I CTCGAG 1 cut(s) 228
SinI GGWCC 4 cut(s) 435, 1794, 1883, 2189
SlaI CTCGAG 1 cut(s) 228
SmiMI CAYNNNNRTG 2 cut(s) 1203, 2814
SmlI CTYRAG 5 cut(s) 228, 1513, 2135, 2415, 2714
SmoI CTYRAG 5 cut(s) 228, 1513, 2135, 2415, 2714
SpeI ACTAGT 1 cut(s) 2282
SseBI AGGCCT 1 cut(s) 1323
SsiI CCGC 3 cut(s) 266, 1750, 2368
SspI AATATT 3 cut(s) 808, 934, 1378
SstI GAGCTC 1 cut(s) 2451
StuI AGGCCT 1 cut(s) 1323
StyD4I CCNGG 5 cut(s) 24, 336, 1257, 1600, 2311
StyI CCWWGG 3 cut(s) 2004, 2167, 2230
TaaI ACNGT 7 cut(s) 52, 332, 739, 1731, 2090, 2998, 3353
TaiI ACGT 4 cut(s) 223, 1783, 2547, 2625
TaqI TCGA 2 cut(s) 229, 1985
TaqII GACCGA 1 cut(s) 117
TatI WGTACW 2 cut(s) 44, 2727
TscAI CASTG 5 cut(s) 145, 1210, 1537, 3003, 3258
TseFI GTSAC 3 cut(s) 140, 2627, 2998
TseI GCWGC 7 cut(s) 71, 1968, 2390, 2393, 2658, 2879, 3329
Tsp45I GTSAC 3 cut(s) 140, 2627, 2998
TspDTI ATGAA 6 cut(s) 1592, 1692, 2427, 2490, 2795, 2832
TspGWI ACGGA 2 cut(s) 411, 1031
TspRI CASTG 5 cut(s) 145, 1210, 1537, 3003, 3258
Van91I CCANNNNNTGG 3 cut(s) 2186, 2352, 2981
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 4 cut(s) 435, 1794, 1883, 2189
XagI CCTNNNNNAGG 2 cut(s) 285, 1890
XbaI TCTAGA 4 cut(s) 1024, 1252, 2020, 2116
XceI RCATGY 3 cut(s) 727, 2701, 2888
XcmI CCANNNNNNNNNTGG 2 cut(s) 1827, 2237
XhoI CTCGAG 1 cut(s) 228
XmiI GTMKAC 2 cut(s) 30, 1960
XmnI GAANNNNTTC 2 cut(s) 630, 2434
ZraI GACGTC 1 cut(s) 1781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.