RLG00000013277

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
29103086 .. 29112801
9716 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013277

Sequence Viewer

Length: 3165 bp
ATGGAGAGAGTTACTTGGTTCTTCTTGGTATACTTGATCTGTTGTACGGCAGCCAGGTGCTTAACTATAACGGCACAAACCAAACTTAACATCACCACCGACTGCTCTGCTCTTCTTGCTCTCAAAGCCCGTATCACCAGTGACCCTCAAAACATGATCTTCACCAATTGGTCAACCATCACCCCTGTTTGCAACTGGGTTGGCGTCATTTGTGGTGCACACAATCATCGAGTCACAGAGTTGAACATCTCTTACTTTGGTCTCATAGGCACCATTCCTCCTGAGCTAGGCAACTTATCCTTGCTTGTTGATCTGGACATCCAAAATAATAGTTTCCAGGGTACCTTGCCTCAAGAATTAGCTCACCTGCGCCGGTTGAAGTTCATTAACTTGGGAAACAACAAGTTTATGGGAGTGATACCGTCATGGTTTGGGTCCTTGTACAAACTTCAAGGATTCAAGTTGTTTGGTAATCAATTTGTAGGTTCTATACCAGCTACCATCTTCAACTTATCTACTCTGCAAATATTGAATCTGCGTTATAACCAACTCTCAGAGATTCCAAATGAGATCGGCACCTTGAATCAGCTGGAAAAGTTGCTTGTGCAAAATAATGCCTTAAAAGGGCCTATTCCTATTGGTGTCTTCAATATCTCATCTTTGACTACAGCAAGTTTCTATGGAAACAACTTGAATGGTAGAATTCCTGACAATATATGTCAACATCTTCCAAATATTCAATACTTGAGTTTGGTTTACAATCAGTTTGATGGTCCACTTCCATCCAAGTTATGGCAATGCAAACAACTTCTTTTATTAGATTTGGGGTCTAACAAGTTCAGTGGAAGAATACCCAAATATATTGGGAACTTAACCCAGATAAAGAAGATTTGGCTTGACACTAACAGCTTAACAGCAAAATGCATCTTGAGAGGTAACATCCCCAGTGATATAGGGAATTTGAGTAGCTTGATAAAGTTATCCCTCGATGAGAATCAATTGAGTGGGCCAATTCCAATCTCAATGGGAAGACTACATAATCTTCAAGGTTTGTATATTTATGATAACACATTGCAAGGATACATTCCAGATGAACTTTGTCAACTAGAACACTTGAGTGATTTGATTTTGGGTGGGAATCAACTCTCTGGTTCTGTGCCTTCCTGCTTGGGTAATCTAACAGCATCTCTAAGAGATCTATCCTTATGGTCCAATTTATTGAATTCCACAATACCATCTACCTTGTGGGGACTTACAAATATCTTGGAAATAGACTTGTCATTCAATTCTCTAATCGGACCTCTATCAGGTGGTGTTGGTAATTTGAAAGTTGCTATAAACATAGATGTATCATACAACCAATTATCTGGTAGTATACCAAGTAGCATTGGGAGTTTATCGAATTTGGTCAATCTCTCCTTAGCACATAATAATCTAGAAGGCCCTATTCCTAGTTCCTTTGCTACATGTTCAAGCTTAGAACTGTTGGATTTATCTCAGAACAGTCTCTCTGGAGTGATTCCAAAGTCTCTTGAAGCACTCTCATATCTCAAGTATCTGAATCTATCTTTCAACATACTCCAAGGAGAAATTCCAACCGGCGGTCCATTCAAAAACTTCCCTGCTGAATCATTTGTTTCAAACCGTGGACTCTGTGGTGCATCCCATTTTCAACTTCCACCATGCAAAACAAAAACTAGTATATTTATCTTGAAATATGTTATTCCCGGGATCTTGTCAGCAATGCTTCTAGCTACCTCCATATTTTGGATTTTGATGTTCCGCAGAAAAAAGAATGCGAATGCTGCAACACATACTATCTTGACGCCTCAAGTTTTATGGAGACGAGTTTCGTACCAAGAGCTCCTAAGTGCAACAGATGGATTCAATGAAAGCAACTTACTTGGTACTGGGGGTTTTGGCTCAGTATATAAAGGAACATTGTCGGATGGGATAGACGTTGCCATAAAGGTTTTCAATTTGGAGTTAGAAGGGGCATTTACAAGTTTTGAGGTTGAATGTGAAGTGCTAAGTAATGTTCGTCACCGAAATCTTGTCAAAGTCATCAGTTGCTGCAGCCAAATTGATTTCAAAGGTCTTGTGTTGAATTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAGAATTCTTCTTTGAACATAATGCAGAGGTTGGATATAATGATAGATGTTGCATCAGCATTGGAGTACCTTCATCATGGTTATGAAGTAGCTATTGTCCATTGTGATTTGAAGCCAAGCAACATCCTACTAGATGATGATATGGTTGCACATGTTGCTGATTTTGGTATTGCGAGACTCTTGGGTGAAGGAGATTCTATGACTCAAACCATGACCCTAGCCACAATTGGGTATATTGCTCCAGAGTATGGAATGGAAGGAATAGTGACCAAAAGAGGGGATGTGTATAGTTTTGGCATCATCAACCTCAATATGCTACTCTGGTATGTTCGCTGGCTTCGCAATTCATCAAACCCTATTAAATGCACGTCTGAAATTGATGTTTCACTTCTGCTCTTGATCAGTCTGCTTCTGTTTCCATTCCATGTTGGCAATTGCAAGGACAATTCAGATACGGGAGATGTTGTGGAGTTCATCCTGAAAGAGAGAATGAAAGGATTAGAACATACTCTAAGTGAAAGAGATGTGTTGGGTTTGAGAGAAGGTGGGATCGGAAAGACCACACTTACTCCTCCTATAAGGGCTTTTCTAGGTTCTGGAGTTGAAGATGTGGATGGGTCCAAAGGAAGTCAAAATGGAACAATAAGTGAAGAGAGTCCAGCTAATCCAGTTGATGGGCCTGACACTTGTTCATTTACTGCATTTTTCTACTCACTTTTATCGTCATCAGAGTCGGGAGATAAGAGTAAAAGTTCAGAGGTGCCGACCGCTATATCACATTGTGCGCTACTGACGTTTCAGCTATTGGTGGGGGGTGGTCATTTTGCACTCTATTTGAACAGTGATCTATTGAGTGGATCAAGTTCAGTTTCAGAAACCTATGGGATTCCATGTCTTGCAAACTCAGAAGACTTTGATGTTAAAGAAGTAGAGTTATGGGGTTTTGTGTCTTCTACTAAGTATGAGGAAGTACTTGCTCAAAGCTGTATGGAGGCACCTGATATTTGCCAATGGTGA

Protein Analysis

1055

Amino Acids

115.44

Weight (kDa)

5.39

Isoelectric Point (pI)

32.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 71 2.5e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 161 - 223 1.5e-06 Leucine-rich repeat region
LRR_14 PF23598 316 - 428 1.9e-06 Leucine-rich repeat region
LRR_8 PF13855 323 - 382 5.5e-06 Leucine rich repeat
LRR_8 PF13855 467 - 525 3.1e-09 Leucine rich repeat
Pkinase PF00069 630 - 830 3.6e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 633 - 818 1.2e-37 Protein tyrosine and serine/threonine kinase
TLD PF07534 983 - 1031 9.5e-07 TLDc domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 543
AarI CACCTGC 1 cut(s) 375
Acc36I ACCTGC 1 cut(s) 375
Acc65I GGTACC 1 cut(s) 341
AccB1I GGYRCC 5 cut(s) 269, 341, 575, 2908, 3142
AccB7I CCANNNNNTGG 4 cut(s) 792, 1767, 2396, 2822
AccI GTMKAC 2 cut(s) 30, 1375
AciI CCGC 3 cut(s) 1602, 1783, 2916
AclWI GGATC 3 cut(s) 1739, 2705, 3013
AcsI RAATTY 6 cut(s) 702, 958, 1222, 1402, 1590, 2152
AcyI GRCGYC 2 cut(s) 204, 1826
AdeI CACNNNGTG 1 cut(s) 2930
AfaI GTAC 7 cut(s) 46, 343, 443, 1856, 1909, 2216, 3120
AflIII ACRYGT 2 cut(s) 1466, 2299
AhlI ACTAGT 1 cut(s) 1697
AjiI CACGTC 1 cut(s) 2517
AjnI CCWGG 2 cut(s) 53, 336
AjuI GAANNNNNNNTTGG 2 cut(s) 1575, 1607
AleI CACNNNNGTG 1 cut(s) 1116
Alw21I GWGCWC 2 cut(s) 220, 1866
Alw26I GTCTC 5 cut(s) 266, 1511, 1533, 1837, 2317
Alw44I GTGCAC 1 cut(s) 216
AlwI GGATC 3 cut(s) 1739, 2705, 3013
AlwNI CAGNNNCTG 1 cut(s) 2073
Ama87I CYCGRG 1 cut(s) 1727
AoxI GGCC 4 cut(s) 626, 1007, 1441, 2825
ApaLI GTGCAC 1 cut(s) 216
ApeKI GCWGC 4 cut(s) 50, 1805, 2073, 2076
ApoI RAATTY 6 cut(s) 702, 958, 1222, 1402, 1590, 2152
Asp718I GGTACC 1 cut(s) 341
AspLEI GCGC 2 cut(s) 372, 2935
AsuC2I CCSGG 2 cut(s) 1728, 1729
AsuHPI GGTGA 7 cut(s) 85, 127, 154, 172, 356, 2036, 2345
AvaI CYCGRG 1 cut(s) 1727
AvaII GGWCC 6 cut(s) 435, 773, 1209, 1298, 1604, 2766
BaeGI GKGCMC 1 cut(s) 220
BanI GGYRCC 5 cut(s) 269, 341, 575, 2908, 3142
BanII GRGCYC 1 cut(s) 1866
BbsI GAAGAC 4 cut(s) 637, 1036, 3063, 3090
Bbv12I GWGCWC 2 cut(s) 220, 1866
BbvI GCAGC 4 cut(s) 62, 1792, 2060, 2088
BccI CCATC 9 cut(s) 185, 509, 764, 790, 1243, 1874, 1943, 2756, 2816
BceAI ACGGC 2 cut(s) 63, 87
BcgI CGANNNNNNTGC 2 cut(s) 89, 123
BciT130I CCWGG 2 cut(s) 55, 338
BciVI GTATCC 1 cut(s) 1073
BclI TGATCA 1 cut(s) 2547
BcnI CCSGG 2 cut(s) 1728, 1729
BcoDI GTCTC 5 cut(s) 266, 1511, 1533, 1837, 2317
BcuI ACTAGT 1 cut(s) 1697
BfaI CTAG 9 cut(s) 287, 1106, 1436, 1452, 1698, 1751, 2279, 2366, 2738
BfmI CTRYAG 2 cut(s) 666, 2074
BfuAI ACCTGC 1 cut(s) 375
BfuI GTATCC 1 cut(s) 1073
BglII AGATCT 1 cut(s) 1195
BisI GCNGC 4 cut(s) 51, 1806, 2074, 2077
BlsI GCNGC 4 cut(s) 52, 1807, 2075, 2078
BmcAI AGTACT 1 cut(s) 3120
Bme1390I CCNGG 4 cut(s) 55, 338, 1728, 1729
Bme18I GGWCC 6 cut(s) 435, 773, 1209, 1298, 1604, 2766
BmeT110I CYCGRG 1 cut(s) 1727
BmgBI CACGTC 1 cut(s) 2517
BmiI GGNNCC 8 cut(s) 271, 343, 436, 577, 2126, 2767, 2910, 3144
BmrFI CCNGG 4 cut(s) 55, 338, 1728, 1729
BmrI ACTGGG 3 cut(s) 205, 939, 1920
BmsI GCATC 5 cut(s) 933, 1193, 1670, 2210, 2454
BmuI ACTGGG 3 cut(s) 205, 939, 1920
BpiI GAAGAC 4 cut(s) 637, 1036, 3063, 3090
BpmI CTGGAG 3 cut(s) 1533, 2373, 2766
Bpu10I CCTNAGC 2 cut(s) 282, 1420
BpuEI CTTGAG 7 cut(s) 336, 766, 949, 1135, 1535, 1815, 2150
BpuMI CCSGG 2 cut(s) 1728, 1729
BsaBI GATNNNNATC 1 cut(s) 993
BsaHI GRCGYC 2 cut(s) 204, 1826
BsaI GGTCTC 1 cut(s) 266
BsaJI CCNNGG 4 cut(s) 337, 1582, 1645, 1727
BsaXI ACNNNNNCTCC 6 cut(s) 262, 292, 2598, 2628, 2701, 2731
Bse118I RCCGGY 2 cut(s) 372, 1598
Bse1I ACTGG 5 cut(s) 138, 200, 945, 1915, 2816
Bse3DI GCAATG 3 cut(s) 803, 1070, 1749
Bse8I GATNNNNATC 1 cut(s) 993
BseBI CCWGG 2 cut(s) 55, 338
BseDI CCNNGG 4 cut(s) 337, 1582, 1645, 1727
BseGI GGATG 9 cut(s) 318, 782, 939, 1661, 1954, 2271, 2434, 2622, 2767
BseJI GATNNNNATC 1 cut(s) 993
BseMI GCAATG 3 cut(s) 803, 1070, 1749
BseMII CTCAG 6 cut(s) 273, 567, 1511, 1938, 2162, 3066
BseNI ACTGG 5 cut(s) 138, 200, 945, 1915, 2816
BseRI GAGGAG 1 cut(s) 2709
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 4 cut(s) 62, 1792, 2060, 2088
Bsh1285I CGRYCG 1 cut(s) 2916
BshFI GGCC 4 cut(s) 628, 1009, 1443, 2827
BshNI GGYRCC 5 cut(s) 269, 341, 575, 2908, 3142
BsiEI CGRYCG 1 cut(s) 2916
BsiHKAI GWGCWC 2 cut(s) 220, 1866
BsiHKCI CYCGRG 1 cut(s) 1727
BsiSI CCGG 3 cut(s) 373, 1599, 1728
BslFI GGGAC 1 cut(s) 1263
BsmAI GTCTC 5 cut(s) 266, 1511, 1533, 1837, 2317
BsmBI CGTCTC 1 cut(s) 1837
BsmFI GGGAC 1 cut(s) 1263
BsmI GAATGC 2 cut(s) 1801, 1807
BsnI GGCC 4 cut(s) 628, 1009, 1443, 2827
Bso31I GGTCTC 1 cut(s) 266
BsoBI CYCGRG 1 cut(s) 1727
Bsp1286I GDGCHC 2 cut(s) 220, 1866
Bsp1407I TGTACA 1 cut(s) 441
BspACI CCGC 3 cut(s) 1602, 1783, 2916
BspANI GGCC 4 cut(s) 628, 1009, 1443, 2827
BspCNI CTCAG 6 cut(s) 274, 566, 1510, 1937, 2161, 3065
BspLI GGNNCC 8 cut(s) 271, 343, 436, 577, 2126, 2767, 2910, 3144
BspMAI CTGCAG 1 cut(s) 2078
BspMI ACCTGC 1 cut(s) 375
BspPI GGATC 3 cut(s) 1739, 2705, 3013
BspQI GCTCTTC 1 cut(s) 117
BspT107I GGYRCC 5 cut(s) 269, 341, 575, 2908, 3142
BspTNI GGTCTC 1 cut(s) 266
BsrDI GCAATG 3 cut(s) 803, 1070, 1749
BsrFI RCCGGY 2 cut(s) 372, 1598
BsrGI TGTACA 1 cut(s) 441
BsrI ACTGG 5 cut(s) 138, 200, 945, 1915, 2816
BssAI RCCGGY 2 cut(s) 372, 1598
BssECI CCNNGG 4 cut(s) 337, 1582, 1645, 1727
BssNAI GTATAC 2 cut(s) 31, 1376
BssNI GRCGYC 2 cut(s) 204, 1826
BssT1I CCWWGG 1 cut(s) 1582
Bst1107I GTATAC 2 cut(s) 31, 1376
Bst2UI CCWGG 2 cut(s) 55, 338
Bst4CI ACNGT 5 cut(s) 423, 1485, 1505, 1646, 2990
Bst6I CTCTTC 2 cut(s) 117, 2793
BstACI GRCGYC 2 cut(s) 204, 1826
BstAPI GCANNNNNTGC 1 cut(s) 2303
BstAUI TGTACA 1 cut(s) 441
BstC8I GCNNGC 1 cut(s) 2483
BstDSI CCRYGG 1 cut(s) 1645
BstENI CCTNNNNNAGG 2 cut(s) 285, 1305
BstF5I GGATG 9 cut(s) 318, 782, 939, 1661, 1954, 2271, 2434, 2622, 2767
BstHHI GCGC 2 cut(s) 372, 2935
BstMAI GTCTC 5 cut(s) 266, 1511, 1533, 1837, 2317
BstMCI CGRYCG 1 cut(s) 2916
BstMWI GCNNNNNNNGC 5 cut(s) 116, 125, 1805, 2303, 2487
BstNI CCWGG 2 cut(s) 55, 338
BstNSI RCATGY 3 cut(s) 1470, 2116, 2303
BstSCI CCNGG 4 cut(s) 53, 336, 1726, 1727
BstSFI CTRYAG 2 cut(s) 666, 2074
BstSLI GKGCMC 1 cut(s) 220
BstV1I GCAGC 4 cut(s) 62, 1792, 2060, 2088
BstV2I GAAGAC 4 cut(s) 637, 1036, 3063, 3090
BstX2I RGATCY 2 cut(s) 1195, 1731
BstXI CCANNNNNNTGG 1 cut(s) 1367
BstYI RGATCY 2 cut(s) 1195, 1731
BstZ17I GTATAC 2 cut(s) 31, 1376
BsuI GTATCC 1 cut(s) 1073
BsuRI GGCC 4 cut(s) 628, 1009, 1443, 2827
BtgI CCRYGG 1 cut(s) 1645
BtrI CACGTC 1 cut(s) 2517
BtsCI GGATG 9 cut(s) 318, 782, 939, 1661, 1954, 2271, 2434, 2622, 2767
BtsIMutI CAGTG 4 cut(s) 145, 847, 952, 2995
BveI ACCTGC 1 cut(s) 375
Cac8I GCNNGC 1 cut(s) 2483
CaiI CAGNNNCTG 1 cut(s) 2073
CfoI GCGC 2 cut(s) 372, 2935
Cfr10I RCCGGY 2 cut(s) 372, 1598
Cfr9I CCCGGG 1 cut(s) 1727
CseI GACGC 2 cut(s) 193, 1834
Csp6I GTAC 7 cut(s) 45, 342, 442, 1855, 1908, 2215, 3119
CspCI CAANNNNNGTGG 2 cut(s) 823, 858
CviQI GTAC 7 cut(s) 45, 342, 442, 1855, 1908, 2215, 3119
DraIII CACNNNGTG 1 cut(s) 2930
Eam1104I CTCTTC 2 cut(s) 117, 2793
EarI CTCTTC 2 cut(s) 117, 2793
Ecl136II GAGCTC 1 cut(s) 1864
Eco130I CCWWGG 1 cut(s) 1582
Eco24I GRGCYC 1 cut(s) 1866
Eco31I GGTCTC 1 cut(s) 266
Eco47I GGWCC 6 cut(s) 435, 773, 1209, 1298, 1604, 2766
Eco53kI GAGCTC 1 cut(s) 1864
Eco88I CYCGRG 1 cut(s) 1727
EcoICRI GAGCTC 1 cut(s) 1864
EcoNI CCTNNNNNAGG 2 cut(s) 285, 1305
EcoO109I RGGNCCY 3 cut(s) 435, 626, 1442
EcoRI GAATTC 3 cut(s) 702, 1222, 2152
EcoRII CCWGG 2 cut(s) 53, 336
EcoT14I CCWWGG 1 cut(s) 1582
EcoT22I ATGCAT 1 cut(s) 926
EcoT38I GRGCYC 1 cut(s) 1866
ErhI CCWWGG 1 cut(s) 1582
Esp3I CGTCTC 1 cut(s) 1837
FaqI GGGAC 1 cut(s) 1263
FbaI TGATCA 1 cut(s) 2547
FblI GTMKAC 2 cut(s) 30, 1375
Fnu4HI GCNGC 4 cut(s) 51, 1806, 2074, 2077
FokI GGATG 9 cut(s) 305, 769, 926, 1648, 1961, 2258, 2441, 2609, 2774
FriOI GRGCYC 1 cut(s) 1866
Fsp4HI GCNGC 4 cut(s) 51, 1806, 2074, 2077
FspBI CTAG 9 cut(s) 287, 1106, 1436, 1452, 1698, 1751, 2279, 2366, 2738
GlaI GCGC 2 cut(s) 371, 2934
GluI GCNGC 4 cut(s) 51, 1806, 2074, 2077
GsuI CTGGAG 3 cut(s) 1533, 2373, 2766
HaeIII GGCC 4 cut(s) 628, 1009, 1443, 2827
HapII CCGG 3 cut(s) 373, 1599, 1728
HgaI GACGC 2 cut(s) 193, 1834
HhaI GCGC 2 cut(s) 372, 2935
Hin1I GRCGYC 2 cut(s) 204, 1826
Hin6I GCGC 2 cut(s) 370, 2933
HinP1I GCGC 2 cut(s) 370, 2933
HincII GTYRAC 3 cut(s) 174, 722, 1103
HindII GTYRAC 3 cut(s) 174, 722, 1103
HindIII AAGCTT 1 cut(s) 1474
HpaII CCGG 3 cut(s) 373, 1599, 1728
HphI GGTGA 7 cut(s) 85, 127, 154, 172, 356, 2036, 2345
Hpy166II GTNNAC 9 cut(s) 31, 174, 218, 722, 757, 776, 1103, 1376, 1649
Hpy8I GTNNAC 9 cut(s) 31, 174, 218, 722, 757, 776, 1103, 1376, 1649
HpyAV CCTTC 7 cut(s) 1170, 1433, 1985, 2228, 2330, 2399, 2684
HpyCH4III ACNGT 5 cut(s) 423, 1485, 1505, 1646, 2990
HpyCH4IV ACGT 3 cut(s) 1959, 2516, 2942
HpyF10VI GCNNNNNNNGC 5 cut(s) 116, 125, 1805, 2303, 2487
HpySE526I ACGT 3 cut(s) 1959, 2516, 2942
Hsp92I GRCGYC 2 cut(s) 204, 1826
HspAI GCGC 2 cut(s) 370, 2933
KpnI GGTACC 1 cut(s) 345
Ksp22I TGATCA 1 cut(s) 2547
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 3 cut(s) 1869, 2124, 2392
Lsp1109I GCAGC 4 cut(s) 62, 1792, 2060, 2088
LweI GCATC 5 cut(s) 933, 1193, 1670, 2210, 2454
MaeI CTAG 9 cut(s) 287, 1106, 1436, 1452, 1698, 1751, 2279, 2366, 2738
MaeII ACGT 3 cut(s) 1959, 2516, 2942
MaeIII GTNAC 6 cut(s) 10, 140, 232, 935, 2042, 2413
MfeI CAATTG 4 cut(s) 166, 998, 2373, 2581
MflI RGATCY 2 cut(s) 1195, 1731
MhlI GDGCHC 2 cut(s) 220, 1866
MlyI GAGTC 6 cut(s) 240, 1644, 2319, 2344, 2812, 2888
MmeI TCCRAC 4 cut(s) 1467, 1619, 1926, 2160
Mph1103I ATGCAT 1 cut(s) 926
MseI TTAA 8 cut(s) 62, 87, 387, 620, 872, 911, 2508, 3069
MslI CAYNNNNRTG 2 cut(s) 1116, 2229
MspA1I CMGCKG 1 cut(s) 589
MspI CCGG 3 cut(s) 373, 1599, 1728
MspR9I CCNGG 4 cut(s) 55, 338, 1728, 1729
MunI CAATTG 4 cut(s) 166, 998, 2373, 2581
Mva1269I GAATGC 2 cut(s) 1801, 1807
MvaI CCWGG 2 cut(s) 55, 338
MwoI GCNNNNNNNGC 5 cut(s) 116, 125, 1805, 2303, 2487
NciI CCSGG 2 cut(s) 1728, 1729
NlaIV GGNNCC 8 cut(s) 271, 343, 436, 577, 2126, 2767, 2910, 3144
NmuCI GTSAC 4 cut(s) 140, 232, 2042, 2413
NsiI ATGCAT 1 cut(s) 926
NspI RCATGY 3 cut(s) 1470, 2116, 2303
OliI CACNNNNGTG 1 cut(s) 1116
PaqCI CACCTGC 1 cut(s) 375
PciI ACATGT 2 cut(s) 1466, 2299
PciSI GCTCTTC 1 cut(s) 117
PctI GAATGC 2 cut(s) 1801, 1807
PflMI CCANNNNNTGG 4 cut(s) 792, 1767, 2396, 2822
PkrI GCNGC 4 cut(s) 52, 1807, 2075, 2078
PleI GAGTC 6 cut(s) 239, 1644, 2319, 2344, 2811, 2887
PpsI GAGTC 6 cut(s) 239, 1644, 2319, 2344, 2811, 2887
PpuMI RGGWCCY 1 cut(s) 435
PscI ACATGT 2 cut(s) 1466, 2299
PsiI TTATAA 1 cut(s) 543
Psp124BI GAGCTC 1 cut(s) 1866
Psp5II RGGWCCY 1 cut(s) 435
Psp6I CCWGG 2 cut(s) 53, 336
PspGI CCWGG 2 cut(s) 53, 336
PspN4I GGNNCC 8 cut(s) 271, 343, 436, 577, 2126, 2767, 2910, 3144
PspPPI RGGWCCY 1 cut(s) 435
PsrI GAACNNNNNNTAC 2 cut(s) 236, 268
PstI CTGCAG 1 cut(s) 2078
PstNI CAGNNNCTG 1 cut(s) 2073
PsuI RGATCY 2 cut(s) 1195, 1731
PvuII CAGCTG 1 cut(s) 589
RsaI GTAC 7 cut(s) 46, 343, 443, 1856, 1909, 2216, 3120
RsaNI GTAC 7 cut(s) 45, 342, 442, 1855, 1908, 2215, 3119
RseI CAYNNNNRTG 2 cut(s) 1116, 2229
SacI GAGCTC 1 cut(s) 1866
SapI GCTCTTC 1 cut(s) 117
SaqAI TTAA 8 cut(s) 62, 87, 387, 620, 872, 911, 2508, 3069
SatI GCNGC 4 cut(s) 51, 1806, 2074, 2077
ScaI AGTACT 1 cut(s) 3120
SchI GAGTC 6 cut(s) 240, 1644, 2319, 2344, 2812, 2888
ScrFI CCNGG 4 cut(s) 55, 338, 1728, 1729
SduI GDGCHC 2 cut(s) 220, 1866
SfaNI GCATC 5 cut(s) 933, 1193, 1670, 2210, 2454
SfcI CTRYAG 2 cut(s) 666, 2074
SinI GGWCC 6 cut(s) 435, 773, 1209, 1298, 1604, 2766
SmaI CCCGGG 1 cut(s) 1729
SmiMI CAYNNNNRTG 2 cut(s) 1116, 2229
SmlI CTYRAG 7 cut(s) 351, 745, 928, 1114, 1550, 1830, 2129
SmoI CTYRAG 7 cut(s) 351, 745, 928, 1114, 1550, 1830, 2129
SpeI ACTAGT 1 cut(s) 1697
SsiI CCGC 3 cut(s) 1602, 1783, 2916
SspI AATATT 2 cut(s) 528, 736
SspMI CTAG 9 cut(s) 287, 1106, 1436, 1452, 1698, 1751, 2279, 2366, 2738
SstI GAGCTC 1 cut(s) 1866
StyD4I CCNGG 4 cut(s) 53, 336, 1726, 1727
StyI CCWWGG 1 cut(s) 1582
TaaI ACNGT 5 cut(s) 423, 1485, 1505, 1646, 2990
TaiI ACGT 3 cut(s) 1962, 2519, 2945
TaqI TCGA 3 cut(s) 229, 987, 1400
TatI WGTACW 2 cut(s) 441, 3118
Tru1I TTAA 8 cut(s) 62, 87, 387, 620, 872, 911, 2508, 3069
Tru9I TTAA 8 cut(s) 62, 87, 387, 620, 872, 911, 2508, 3069
TscAI CASTG 4 cut(s) 145, 847, 952, 2995
TseFI GTSAC 4 cut(s) 140, 232, 2042, 2413
TseI GCWGC 4 cut(s) 50, 1805, 2073, 2076
Tsp45I GTSAC 4 cut(s) 140, 232, 2042, 2413
TspDTI ATGAA 9 cut(s) 373, 1107, 1905, 2210, 2247, 2484, 2611, 2654, 2829
TspMI CCCGGG 1 cut(s) 1727
TspRI CASTG 4 cut(s) 145, 847, 952, 2995
Van91I CCANNNNNTGG 4 cut(s) 792, 1767, 2396, 2822
VneI GTGCAC 1 cut(s) 216
VpaK11BI GGWCC 6 cut(s) 435, 773, 1209, 1298, 1604, 2766
XagI CCTNNNNNAGG 2 cut(s) 285, 1305
XapI RAATTY 6 cut(s) 702, 958, 1222, 1402, 1590, 2152
XbaI TCTAGA 1 cut(s) 1435
XceI RCATGY 3 cut(s) 1470, 2116, 2303
XcmI CCANNNNNNNNNTGG 2 cut(s) 789, 1242
XmaI CCCGGG 1 cut(s) 1727
XmiI GTMKAC 2 cut(s) 30, 1375
XspI CTAG 9 cut(s) 287, 1106, 1436, 1452, 1698, 1751, 2279, 2366, 2738
ZrmI AGTACT 1 cut(s) 3120
Zsp2I ATGCAT 1 cut(s) 926
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.