Rw5G010730

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
11765630 .. 11769472
3843 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G010730.1

Sequence Viewer

Length: 3384 bp
ATGGAGAAAAACCAAATTCTGTGGGGGATAGCTTTGCTGGTGGTTTACTATTGTTGCACCAGTAACATAACCATGGCTGCAGCGCAAACCAACTTCAGCACCGACCAGTCTGCTCTTCTTGCTCTCAAAGCACGTATCACCGATGACCCTCAGAACAAGATCTTGACCAACTGGTCATCCAACTCCGACGTTTGCAACTGGGTCGGGGTTACATGCGGTGAACGCCACCTTAGGGTCGTATTTTTGAACCTCTCTGTGTTTCATCTCACTGGCACCATTCCTCCGGAGCTAGGAAACCTGTCATTTCTTGCTGGGATGCGCCTAGAAAATAACAGCTTCCACGGAACTATCCCAGGGGAATTGGCTGGTTTGCGGCGACTCACGTTGTTTAGCTTCGGATTCAATAACTTTGTGGGAGAGATTCCACTATGGTTGGGGTCCTTGTCCAAACTACAAATCCTCAACTTGTATGGCAATGGGTTTTCAGGTTCAATACCCGCGGTTATCTTCAACTTGTCTGCACTACAAGTACTTGATCTCAGATATAATCAACTATCAGGTACCATACCGAAAGAAATTGGGAACTTAACAACGCTGAAGATGCTGTACCTAGACTCGAACAACATCAAAGAACTTCCAAAGGAGATTGGTGCTTTGGATTTGGAGGAATTGTTTGTGCAAGACAACGGCCTAGAAGGTCTTGTTCCTGCGGGTGTCTTCAACATGTCTTCTTTGACTACTGTGAATCTATATAGAAACCGTTTGAACGGCAAGGTTCCAGACAATTTGTGTCGGAATCTCCCTAATCTTCAGAAATTGAATTTGGCTTACAACCAATTTCAGGGTCCACTTCCATCAAGCTTAGAGCAGTGCAAACAACTTCTGGTATTAACCTTGGGAGATAACAATTTCAGTGGGAGTATTCCTAGAAATATTGGGAACTTGACGCAGATCAAGTATCTTCATCTTAGTCCAAACAATTTGACAGGGACAATACCACACGAGATTGGTCACCTTGGAAACTTAGAGATTTTAGCACTTGGTGCGAATAATCTCAAAGGCCTCGTCCCATCAGAAATCTTCAATTTATCCTTGCTAACAGGAATCGATATTTCTTTGAATCAACTCTCAGGCAGTCTCCCTGCAAATATAGGCCTTGTCATTCCAAACCTACAAGAGATCCATGTAGGAGGAAATAATCTTAGTGGAGAGATCCCAAACTTCATCTCCAATGCTTCTAAGCTCACAAAACTAGACATGGGCCCAAACTTATTTTCTGGGTTTATTCCTGCTAACCTCTGTGCCTTGCCAAATCTTCAATGGCTTCTATTATCGTTGAATAACTTGATGATTGATATTTCTACCCCAGAAGCAAACATTTTCTCCTGTCTACCTAATCTCAGAAATTTGAGGATGTTAAGCCTAGCAGGAAACCCTTTAAATACCACCCTCCCTAGTTCCCTTGGGAATCTCTCTACATCACTACAATATATGGATTTTAGAGGATGCAACTTAAGGGGTAACATTCCCAACGAGATTGGCAACTTAAGCGGCTTGACAACCTTGTACCTGGCATTCAATGAACTGAGCGGATCAATTCCAACGACACTGGGAAAACTACGGAATCTCCAAGGTTTGTATTTGACTTTTAACAAATTGCAAGGAAACATACCAGATGAACTTTGTCAGCTAGACAGCCTAGCTGATTTAGAATTGTTTATTAATGTACTCTCTGGTACTATACCTTCCTGCTTAGGTAACCTAACCAGATCACTAAGAAGGCTAAATTTAGGATACAATATGCTAACTTCCACAATACCTTCTTCCTTGTGGGAACTTAGATACATCTTGGTCTTACGTCTATCATCCAATAGTCTAAGTGGACCTATCTCAGAAAATGTTGGCCATTTGGAAGTTGTGGTAGATATAGATTTATCAAACAACCATTTATCAGGTTTGATGCCAAGCAGCTTTGGGGGTCTTGAAAATTTGGTCTCACTCTCCTTGGCAAATAATAATTTTGAAGGCAACATTCCTAGTTCATTTGGGAACTCCCTAAGCCTAGAAATCCTGGATTTATCCAACAACAGTCTTTCTGGAGTCATTCCTAAGTCTCTAGAAGCACTCTCACATCTCCAATCTCTGAATTTGTCTTTCAACAAACTACAAGGAGAAATTCCAACTGGTGGACCTTTCAATAACTTCTCTTCTGCATCTTTTGTCTCAAATGGTGCACTCTGTGGTGCACCCCAATTGCTTGTTCCACCATGCAAGAAGAAAGCAGTTGGCAGTTCTTTCCCAAAATATATTATTATAGGCATCTTGTCAGCGATAGTGCTCATAGTAGGCCTTGCATCGATGATAATGCTATGCAGAAAAAGGAATGTGGAAGCTGCAACAGAGGTTGCCCTGTTACATCAGCCTCTTTGGAGAAATGTTTCACACTTGGAACTTTTAAGGGCAACAAATGGGTTCAATGAAAACAACCTACTTGGATCTGGGGGTTTTGGCACAGTATATAAAGGAACGTTGTCAGATGGGATAGACGTTGCGGTAAAGGTTTTCAATTTAGAAGTAGAAGGGGCTTTCAAGAGTTTTGATAATGAATGTGAAATGCTAGGAAATATTCGTCATCGAAATCTTCTCAAAATAATCTCATGTTGCAGTCAAATAGACTTCAAAGCCTTAGTACTGAACTACATGCCCAATGGGAGTCTTGACAAATGGTTGTATTCCGAAAACCTTTCCTTGAGCCTCCTGCAGAGGTTGAATATAGTGATTGATGTTGCATCAGCGTTGGAGTACCTTCATCATGGTTATGAAACACCCATCACCCATTGTGATTTGAAGCCCAGCAACATACTACTAGATGATGATATGGTCGCACATGTTGCTGATTTTGGCATGGCAAAGCTTTTAGGTGGTGGAGATTCTATGACTCAGACAATGACCCTAGCCACCATTGGTTATATGGCTCCAGAGTATGGAACAGAAGGAATAGTCTCGAGAAGAGGGGATGTGTACAGCTTTGGTATTGTACTGATGGAAACATTCACAAAGAGGAAGCCAACAGATGAGATGTTTGGTGGGGATATGAGTATGAAGCAATGGGTTGCAAATTCACTATTTCTAGATGGAATAGTTGAAGTTGCAGATGCCAATTTATTTGGGACTCAAGAAGGCAATGATGTTGTGAGCACGACAGAGTGTTTGTCATCCATTCTGGGATTAGCTCTAGCTTGTTGTGCAGAATCACCGGAAGAGAGAACAAATATGCAAGATGCTCTAGCCACGCTCAACAAAATTAAGACCAAGTTTTTGAAGGCCACTGCAGGAGGTGTGGTGTTAAACAGTTCTCTTATAAGCAGTTCTAAATTAAATTGA

Protein Analysis

1127

Amino Acids

122.14

Weight (kDa)

5.47

Isoelectric Point (pI)

36.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 34 - 72 5.1e-11 Leucine rich repeat N-terminal domain
LRR_8 PF13855 150 - 209 7.6e-09 Leucine rich repeat
LRR_14 PF23598 171 - 275 3.8e-11 Leucine-rich repeat region
LRR_8 PF13855 221 - 280 8.3e-07 Leucine rich repeat
LRR_14 PF23598 286 - 418 1.7e-10 Leucine-rich repeat region
LRR_14 PF23598 458 - 616 9.4e-12 Leucine-rich repeat region
LRR_8 PF13855 518 - 575 8.8e-06 Leucine rich repeat
LRR_14 PF23598 609 - 722 4.7e-07 Leucine-rich repeat region
LRR_8 PF13855 664 - 722 2.1e-08 Leucine rich repeat
Pkinase PF00069 826 - 1097 2.5e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 828 - 1096 5e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3362
AasI GACNNNNNNGTC 1 cut(s) 172
Acc65I GGTACC 1 cut(s) 560
AccB1I GGYRCC 2 cut(s) 272, 560
AccB7I CCANNNNNTGG 2 cut(s) 2186, 2984
AccBSI CCGCTC 1 cut(s) 1590
AccI GTMKAC 1 cut(s) 1390
AccII CGCG 1 cut(s) 500
AccIII TCCGGA 1 cut(s) 283
AciI CCGC 8 cut(s) 216, 373, 498, 500, 710, 1551, 1590, 2552
AclI AACGTT 1 cut(s) 2528
AclWI GGATC 4 cut(s) 1174, 1207, 1600, 2503
AcoI YGGCCR 1 cut(s) 1903
AcsI RAATTY 8 cut(s) 15, 820, 1405, 1786, 1987, 2146, 2175, 3118
AcuI CTGAAG 3 cut(s) 79, 617, 794
AdeI CACNNNGTG 2 cut(s) 1043, 2240
AfiI CCNNNNNNNGG 5 cut(s) 232, 290, 841, 2186, 2984
AflII CTTAAG 2 cut(s) 1513, 1546
AflIII ACRYGT 2 cut(s) 723, 2887
AjnI CCWGG 3 cut(s) 352, 1569, 2070
AjuI GAANNNNNNNTTGG 6 cut(s) 806, 838, 1258, 1290, 2244, 2276
Alw21I GWGCWC 4 cut(s) 2236, 2248, 2340, 3200
Alw26I GTCTC 5 cut(s) 1142, 1999, 2118, 2227, 3007
Alw44I GTGCAC 2 cut(s) 2232, 2244
AlwI GGATC 4 cut(s) 1174, 1207, 1600, 2503
Ama87I CYCGRG 1 cut(s) 3004
Aor13HI TCCGGA 1 cut(s) 283
AoxI GGCC 7 cut(s) 688, 1060, 1153, 1261, 1903, 2347, 3324
ApaI GGGCCC 1 cut(s) 1265
ApaLI GTGCAC 2 cut(s) 2232, 2244
ApeKI GCWGC 4 cut(s) 77, 80, 1968, 2393
ApoI RAATTY 8 cut(s) 15, 820, 1405, 1786, 1987, 2146, 2175, 3118
ArsI GACNNNNNNTTYG 6 cut(s) 1050, 1082, 3193, 3225, 3301, 3333
AseI ATTAAT 1 cut(s) 1722
Asp700I GAANNNNTTC 1 cut(s) 2437
Asp718I GGTACC 1 cut(s) 560
AspLEI GCGC 2 cut(s) 85, 321
AspS9I GGNCC 6 cut(s) 438, 845, 1261, 1262, 1883, 2189
AsuHPI GGTGA 5 cut(s) 130, 230, 1004, 2824, 3246
AvaI CYCGRG 1 cut(s) 3004
AvaII GGWCC 4 cut(s) 438, 845, 1883, 2189
AxyI CCTNAGG 1 cut(s) 230
BaeGI GKGCMC 3 cut(s) 1265, 2236, 2248
BalI TGGCCA 1 cut(s) 1905
BanI GGYRCC 2 cut(s) 272, 560
BanII GRGCYC 1 cut(s) 1265
BarI GAAGNNNNNNTAC 4 cut(s) 590, 622, 1729, 1761
BauI CACGAG 1 cut(s) 1001
BbsI GAAGAC 2 cut(s) 709, 720
Bbv12I GWGCWC 4 cut(s) 2236, 2248, 2340, 3200
BbvI GCAGC 4 cut(s) 64, 92, 1980, 2380
BccI CCATC 6 cut(s) 862, 1078, 2531, 2837, 3037, 3128
BceAI ACGGC 2 cut(s) 703, 784
BcgI CGANNNNNNTGC 6 cut(s) 92, 126, 184, 218, 2347, 2381
BciT130I CCWGG 3 cut(s) 354, 1571, 2072
BciVI GTATCC 1 cut(s) 1787
BcoDI GTCTC 5 cut(s) 1142, 1999, 2118, 2227, 3007
BfmI CTRYAG 3 cut(s) 78, 2759, 3330
BfrI CTTAAG 2 cut(s) 1513, 1546
BfuI GTATCC 1 cut(s) 1787
BglII AGATCT 1 cut(s) 159
BisI GCNGC 6 cut(s) 78, 81, 374, 1552, 1969, 2394
BlsI GCNGC 6 cut(s) 79, 82, 375, 1553, 1970, 2395
BmcAI AGTACT 2 cut(s) 531, 2691
Bme1390I CCNGG 3 cut(s) 354, 1571, 2072
Bme18I GGWCC 4 cut(s) 438, 845, 1883, 2189
BmeT110I CYCGRG 1 cut(s) 3004
BmgT120I GGNCC 6 cut(s) 438, 845, 1261, 1262, 1883, 2189
BmiI GGNNCC 7 cut(s) 274, 439, 562, 777, 846, 1263, 2976
BmrFI CCNGG 3 cut(s) 354, 1571, 2072
BmrI ACTGGG 2 cut(s) 208, 1619
BmuI ACTGGG 2 cut(s) 208, 1619
BpiI GAAGAC 2 cut(s) 709, 720
BpmI CTGGAG 2 cut(s) 2118, 2961
Bpu10I CCTNAGC 2 cut(s) 1753, 2057
BpuEI CTTGAG 2 cut(s) 2770, 3159
Bsa29I ATCGAT 2 cut(s) 1107, 2357
BsaAI YACGTR 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 1999
BsaWI WCCGGW 2 cut(s) 283, 3256
Bsc4I CCNNNNNNNGG 5 cut(s) 232, 290, 841, 2186, 2984
Bse1I ACTGG 7 cut(s) 60, 106, 176, 203, 274, 1614, 2188
Bse21I CCTNAGG 1 cut(s) 230
Bse3DI GCAATG 3 cut(s) 481, 3113, 3190
BseAI TCCGGA 1 cut(s) 283
BseBI CCWGG 3 cut(s) 354, 1571, 2072
BseCI ATCGAT 2 cut(s) 1107, 2357
BseGI GGATG 7 cut(s) 176, 321, 1419, 1511, 1865, 3022, 3215
BseLI CCNNNNNNNGG 5 cut(s) 232, 290, 841, 2186, 2984
BseMI GCAATG 3 cut(s) 481, 3113, 3190
BseMII CTCAG 7 cut(s) 164, 553, 1143, 1414, 1577, 1905, 2954
BseNI ACTGG 7 cut(s) 60, 106, 176, 203, 274, 1614, 2188
BseSI GKGCMC 3 cut(s) 1265, 2236, 2248
BseXI GCAGC 4 cut(s) 64, 92, 1980, 2380
BseYI CCCAGC 2 cut(s) 311, 2852
BsgI GTGCAG 2 cut(s) 504, 3267
Bsh1236I CGCG 1 cut(s) 500
BshFI GGCC 7 cut(s) 690, 1062, 1155, 1263, 1905, 2349, 3326
BshNI GGYRCC 2 cut(s) 272, 560
BshVI ATCGAT 2 cut(s) 1107, 2357
BsiHKAI GWGCWC 4 cut(s) 2236, 2248, 2340, 3200
BsiHKCI CYCGRG 1 cut(s) 3004
BsiSI CCGG 2 cut(s) 284, 3257
BslFI GGGAC 3 cut(s) 1003, 1052, 3184
BslI CCNNNNNNNGG 5 cut(s) 232, 290, 841, 2186, 2984
BsmAI GTCTC 5 cut(s) 1142, 1999, 2118, 2227, 3007
BsmFI GGGAC 3 cut(s) 1003, 1052, 3184
BsmI GAATGC 1 cut(s) 1574
BsnI GGCC 7 cut(s) 690, 1062, 1155, 1263, 1905, 2349, 3326
Bso31I GGTCTC 1 cut(s) 1999
BsoBI CYCGRG 1 cut(s) 3004
Bsp120I GGGCCC 1 cut(s) 1261
Bsp1286I GDGCHC 5 cut(s) 1265, 2236, 2248, 2340, 3200
Bsp13I TCCGGA 1 cut(s) 283
Bsp1407I TGTACA 1 cut(s) 3021
Bsp143I GATC 8 cut(s) 159, 535, 951, 1179, 1212, 1592, 1769, 2495
Bsp19I CCATGG 1 cut(s) 72
BspACI CCGC 8 cut(s) 216, 373, 498, 500, 710, 1551, 1590, 2552
BspANI GGCC 7 cut(s) 690, 1062, 1155, 1263, 1905, 2349, 3326
BspCNI CTCAG 7 cut(s) 163, 552, 1142, 1413, 1578, 1904, 2953
BspDI ATCGAT 2 cut(s) 1107, 2357
BspEI TCCGGA 1 cut(s) 283
BspFNI CGCG 1 cut(s) 500
BspLI GGNNCC 7 cut(s) 274, 439, 562, 777, 846, 1263, 2976
BspMAI CTGCAG 3 cut(s) 82, 2763, 3334
BspPI GGATC 4 cut(s) 1174, 1207, 1600, 2503
BspQI GCTCTTC 1 cut(s) 120
BspT107I GGYRCC 2 cut(s) 272, 560
BspTI CTTAAG 2 cut(s) 1513, 1546
BspTNI GGTCTC 1 cut(s) 1999
BsrBI CCGCTC 1 cut(s) 1590
BsrDI GCAATG 3 cut(s) 481, 3113, 3190
BsrGI TGTACA 1 cut(s) 3021
BsrI ACTGG 7 cut(s) 60, 106, 176, 203, 274, 1614, 2188
BssMI GATC 8 cut(s) 159, 535, 951, 1179, 1212, 1592, 1769, 2495
BssSI CACGAG 1 cut(s) 1001
BssT1I CCWWGG 6 cut(s) 72, 894, 1015, 1462, 1630, 2004
Bst2BI CACGAG 1 cut(s) 1001
Bst2UI CCWGG 3 cut(s) 354, 1571, 2072
Bst4CI ACNGT 5 cut(s) 742, 761, 2090, 2515, 3353
Bst6I CTCTTC 4 cut(s) 120, 2212, 3004, 3255
BstAFI CTTAAG 2 cut(s) 1513, 1546
BstAPI GCANNNNNTGC 2 cut(s) 1043, 2891
BstAUI TGTACA 1 cut(s) 3021
BstBAI YACGTR 1 cut(s) 134
BstDSI CCRYGG 3 cut(s) 72, 340, 498
BstEII GGTNACC 2 cut(s) 1010, 1757
BstF5I GGATG 7 cut(s) 176, 321, 1419, 1511, 1865, 3022, 3215
BstFNI CGCG 1 cut(s) 500
BstHHI GCGC 2 cut(s) 85, 321
BstKTI GATC 8 cut(s) 162, 538, 954, 1182, 1215, 1595, 1772, 2498
BstMAI GTCTC 5 cut(s) 1142, 1999, 2118, 2227, 3007
BstMBI GATC 8 cut(s) 159, 535, 951, 1179, 1212, 1592, 1769, 2495
BstMWI GCNNNNNNNGC 8 cut(s) 119, 128, 222, 601, 1043, 1548, 2891, 3245
BstNI CCWGG 3 cut(s) 354, 1571, 2072
BstNSI RCATGY 4 cut(s) 216, 727, 2704, 2891
BstPI GGTNACC 2 cut(s) 1010, 1757
BstSCI CCNGG 3 cut(s) 352, 1569, 2070
BstSFI CTRYAG 3 cut(s) 78, 2759, 3330
BstSLI GKGCMC 3 cut(s) 1265, 2236, 2248
BstUI CGCG 1 cut(s) 500
BstV1I GCAGC 4 cut(s) 64, 92, 1980, 2380
BstV2I GAAGAC 2 cut(s) 709, 720
BstX2I RGATCY 4 cut(s) 159, 1179, 1212, 2495
BstYI RGATCY 4 cut(s) 159, 1179, 1212, 2495
Bsu15I ATCGAT 2 cut(s) 1107, 2357
Bsu36I CCTNAGG 1 cut(s) 230
BsuI GTATCC 1 cut(s) 1787
BsuRI GGCC 7 cut(s) 690, 1062, 1155, 1263, 1905, 2349, 3326
BsuTUI ATCGAT 2 cut(s) 1107, 2357
BtgI CCRYGG 3 cut(s) 72, 340, 498
BtsCI GGATG 7 cut(s) 176, 321, 1419, 1511, 1865, 3022, 3215
BtsI GCAGTG 2 cut(s) 875, 3327
BtsIMutI CAGTG 5 cut(s) 267, 875, 919, 1607, 3327
CfoI GCGC 2 cut(s) 85, 321
Cfr13I GGNCC 6 cut(s) 438, 845, 1261, 1262, 1883, 2189
Cfr42I CCGCGG 1 cut(s) 501
ClaI ATCGAT 2 cut(s) 1107, 2357
CseI GACGC 1 cut(s) 955
CspCI CAANNNNNGTGG 5 cut(s) 37, 414, 449, 895, 930
DpnI GATC 8 cut(s) 161, 537, 953, 1181, 1214, 1594, 1771, 2497
DpnII GATC 8 cut(s) 159, 535, 951, 1179, 1212, 1592, 1769, 2495
DraI TTTAAA 1 cut(s) 1440
DraIII CACNNNGTG 2 cut(s) 1043, 2240
DrdI GACNNNNNNGTC 1 cut(s) 172
DseDI GACNNNNNNGTC 1 cut(s) 172
EaeI YGGCCR 1 cut(s) 1903
Eam1104I CTCTTC 4 cut(s) 120, 2212, 3004, 3255
EarI CTCTTC 4 cut(s) 120, 2212, 3004, 3255
Eco130I CCWWGG 6 cut(s) 72, 894, 1015, 1462, 1630, 2004
Eco147I AGGCCT 3 cut(s) 1062, 1155, 2349
Eco24I GRGCYC 1 cut(s) 1265
Eco31I GGTCTC 1 cut(s) 1999
Eco47I GGWCC 4 cut(s) 438, 845, 1883, 2189
Eco57I CTGAAG 3 cut(s) 79, 617, 794
Eco81I CCTNAGG 1 cut(s) 230
Eco88I CYCGRG 1 cut(s) 3004
Eco91I GGTNACC 2 cut(s) 1010, 1757
EcoO109I RGGNCCY 1 cut(s) 438
EcoO65I GGTNACC 2 cut(s) 1010, 1757
EcoRII CCWGG 3 cut(s) 352, 1569, 2070
EcoT14I CCWWGG 6 cut(s) 72, 894, 1015, 1462, 1630, 2004
EcoT38I GRGCYC 1 cut(s) 1265
ErhI CCWWGG 6 cut(s) 72, 894, 1015, 1462, 1630, 2004
FaqI GGGAC 3 cut(s) 1003, 1052, 3184
FauI CCCGC 2 cut(s) 505, 703
FblI GTMKAC 1 cut(s) 1390
Fnu4HI GCNGC 6 cut(s) 78, 81, 374, 1552, 1969, 2394
FokI GGATG 7 cut(s) 163, 328, 1426, 1518, 1852, 3029, 3202
FriOI GRGCYC 1 cut(s) 1265
Fsp4HI GCNGC 6 cut(s) 78, 81, 374, 1552, 1969, 2394
GlaI GCGC 2 cut(s) 84, 320
GluI GCNGC 6 cut(s) 78, 81, 374, 1552, 1969, 2394
GsaI CCCAGC 2 cut(s) 315, 2856
GsuI CTGGAG 2 cut(s) 2118, 2961
HaeIII GGCC 7 cut(s) 690, 1062, 1155, 1263, 1905, 2349, 3326
HapII CCGG 2 cut(s) 284, 3257
HgaI GACGC 1 cut(s) 955
HhaI GCGC 2 cut(s) 85, 321
Hin6I GCGC 2 cut(s) 83, 319
HinP1I GCGC 2 cut(s) 83, 319
HindIII AAGCTT 2 cut(s) 859, 2912
HpaII CCGG 2 cut(s) 284, 3257
HphI GGTGA 5 cut(s) 130, 230, 1004, 2824, 3246
Hpy166II GTNNAC 9 cut(s) 46, 221, 848, 1391, 1883, 2189, 2234, 2246, 3022
Hpy8I GTNNAC 9 cut(s) 46, 221, 848, 1391, 1883, 2189, 2234, 2246, 3022
Hpy99I CGWCG 1 cut(s) 191
HpyCH4III ACNGT 5 cut(s) 742, 761, 2090, 2515, 3353
HpyCH4IV ACGT 6 cut(s) 133, 189, 383, 1858, 2528, 2547
HpyF10VI GCNNNNNNNGC 8 cut(s) 119, 128, 222, 601, 1043, 1548, 2891, 3245
HpySE526I ACGT 6 cut(s) 133, 189, 383, 1858, 2528, 2547
HspAI GCGC 2 cut(s) 83, 319
Kpn2I TCCGGA 1 cut(s) 283
KpnI GGTACC 1 cut(s) 564
KspI CCGCGG 1 cut(s) 501
Kzo9I GATC 8 cut(s) 159, 535, 951, 1179, 1212, 1592, 1769, 2495
LguI GCTCTTC 1 cut(s) 120
LmnI GCTCC 2 cut(s) 286, 2980
Lsp1109I GCAGC 4 cut(s) 64, 92, 1980, 2380
MaeII ACGT 6 cut(s) 133, 189, 383, 1858, 2528, 2547
MaeIII GTNAC 6 cut(s) 62, 208, 1010, 1520, 1757, 2412
MalI GATC 8 cut(s) 161, 537, 953, 1181, 1214, 1594, 1771, 2497
MbiI CCGCTC 1 cut(s) 1590
MboI GATC 8 cut(s) 159, 535, 951, 1179, 1212, 1592, 1769, 2495
MfeI CAATTG 1 cut(s) 2252
MflI RGATCY 4 cut(s) 159, 1179, 1212, 2495
MhlI GDGCHC 5 cut(s) 1265, 2236, 2248, 2340, 3200
MlsI TGGCCA 1 cut(s) 1905
MluNI TGGCCA 1 cut(s) 1905
MlyI GAGTC 6 cut(s) 372, 608, 2109, 2722, 2932, 3166
MmeI TCCRAC 7 cut(s) 204, 210, 773, 1625, 2106, 2204, 2778
Mox20I TGGCCA 1 cut(s) 1905
MroI TCCGGA 1 cut(s) 283
MroXI GAANNNNTTC 1 cut(s) 2437
MscI TGGCCA 1 cut(s) 1905
MslI CAYNNNNRTG 2 cut(s) 71, 2817
Msp20I TGGCCA 1 cut(s) 1905
MspA1I CMGCKG 1 cut(s) 500
MspCI CTTAAG 2 cut(s) 1513, 1546
MspI CCGG 2 cut(s) 284, 3257
MspR9I CCNGG 3 cut(s) 354, 1571, 2072
MunI CAATTG 1 cut(s) 2252
Mva1269I GAATGC 1 cut(s) 1574
MvaI CCWGG 3 cut(s) 354, 1571, 2072
MvnI CGCG 1 cut(s) 500
MwoI GCNNNNNNNGC 8 cut(s) 119, 128, 222, 601, 1043, 1548, 2891, 3245
NcoI CCATGG 1 cut(s) 72
NdeII GATC 8 cut(s) 159, 535, 951, 1179, 1212, 1592, 1769, 2495
NlaIV GGNNCC 7 cut(s) 274, 439, 562, 777, 846, 1263, 2976
NmuCI GTSAC 1 cut(s) 1010
NspI RCATGY 4 cut(s) 216, 727, 2704, 2891
PaeR7I CTCGAG 1 cut(s) 3004
PasI CCCWGGG 1 cut(s) 353
PceI AGGCCT 3 cut(s) 1062, 1155, 2349
PciI ACATGT 2 cut(s) 723, 2887
PciSI GCTCTTC 1 cut(s) 120
PctI GAATGC 1 cut(s) 1574
PdmI GAANNNNTTC 1 cut(s) 2437
PflMI CCANNNNNTGG 2 cut(s) 2186, 2984
PfoI TCCNGGA 1 cut(s) 2070
PkrI GCNGC 6 cut(s) 79, 82, 375, 1553, 1970, 2395
PleI GAGTC 6 cut(s) 372, 608, 2108, 2721, 2932, 3166
PpsI GAGTC 6 cut(s) 372, 608, 2108, 2721, 2932, 3166
Ppu21I YACGTR 1 cut(s) 134
PpuMI RGGWCCY 1 cut(s) 438
PscI ACATGT 2 cut(s) 723, 2887
PshBI ATTAAT 1 cut(s) 1722
PsiI TTATAA 1 cut(s) 3362
Psp1406I AACGTT 1 cut(s) 2528
Psp5II RGGWCCY 1 cut(s) 438
Psp6I CCWGG 3 cut(s) 352, 1569, 2070
PspEI GGTNACC 2 cut(s) 1010, 1757
PspFI CCCAGC 2 cut(s) 311, 2852
PspGI CCWGG 3 cut(s) 352, 1569, 2070
PspN4I GGNNCC 7 cut(s) 274, 439, 562, 777, 846, 1263, 2976
PspOMI GGGCCC 1 cut(s) 1261
PspPI GGNCC 6 cut(s) 438, 845, 1261, 1262, 1883, 2189
PspPPI RGGWCCY 1 cut(s) 438
PstI CTGCAG 3 cut(s) 82, 2763, 3334
PsuI RGATCY 4 cut(s) 159, 1179, 1212, 2495
RseI CAYNNNNRTG 2 cut(s) 71, 2817
SacII CCGCGG 1 cut(s) 501
SapI GCTCTTC 1 cut(s) 120
SatI GCNGC 6 cut(s) 78, 81, 374, 1552, 1969, 2394
Sau3AI GATC 8 cut(s) 159, 535, 951, 1179, 1212, 1592, 1769, 2495
Sau96I GGNCC 6 cut(s) 438, 845, 1261, 1262, 1883, 2189
ScaI AGTACT 2 cut(s) 531, 2691
SchI GAGTC 6 cut(s) 372, 608, 2109, 2722, 2932, 3166
ScrFI CCNGG 3 cut(s) 354, 1571, 2072
SduI GDGCHC 5 cut(s) 1265, 2236, 2248, 2340, 3200
SfcI CTRYAG 3 cut(s) 78, 2759, 3330
Sfr274I CTCGAG 1 cut(s) 3004
Sfr303I CCGCGG 1 cut(s) 501
SgrBI CCGCGG 1 cut(s) 501
SinI GGWCC 4 cut(s) 438, 845, 1883, 2189
SlaI CTCGAG 1 cut(s) 3004
SmiMI CAYNNNNRTG 2 cut(s) 71, 2817
SmlI CTYRAG 5 cut(s) 1513, 1546, 2749, 3004, 3174
SmoI CTYRAG 5 cut(s) 1513, 1546, 2749, 3004, 3174
SseBI AGGCCT 3 cut(s) 1062, 1155, 2349
SsiI CCGC 8 cut(s) 216, 373, 498, 500, 710, 1551, 1590, 2552
SspI AATATT 2 cut(s) 934, 2626
StuI AGGCCT 3 cut(s) 1062, 1155, 2349
StyD4I CCNGG 3 cut(s) 352, 1569, 2070
StyI CCWWGG 6 cut(s) 72, 894, 1015, 1462, 1630, 2004
TaaI ACNGT 5 cut(s) 742, 761, 2090, 2515, 3353
TaiI ACGT 6 cut(s) 136, 192, 386, 1861, 2531, 2550
TaqI TCGA 5 cut(s) 617, 1107, 2357, 2635, 3005
TatI WGTACW 5 cut(s) 529, 1726, 2689, 3021, 3037
TauI GCSGC 2 cut(s) 376, 1554
TscAI CASTG 5 cut(s) 274, 875, 919, 1614, 3334
TseFI GTSAC 1 cut(s) 1010
TseI GCWGC 4 cut(s) 77, 80, 1968, 2393
Tsp45I GTSAC 1 cut(s) 1010
TspGWI ACGGA 2 cut(s) 357, 1636
TspRI CASTG 5 cut(s) 274, 875, 919, 1614, 3334
Van91I CCANNNNNTGG 2 cut(s) 2186, 2984
Vha464I CTTAAG 2 cut(s) 1513, 1546
VneI GTGCAC 2 cut(s) 2232, 2244
VpaK11BI GGWCC 4 cut(s) 438, 845, 1883, 2189
VspI ATTAAT 1 cut(s) 1722
XapI RAATTY 8 cut(s) 15, 820, 1405, 1786, 1987, 2146, 2175, 3118
XbaI TCTAGA 2 cut(s) 2116, 3130
XceI RCATGY 4 cut(s) 216, 727, 2704, 2891
XcmI CCANNNNNNNNNTGG 2 cut(s) 1317, 2968
XhoI CTCGAG 1 cut(s) 3004
XmiI GTMKAC 1 cut(s) 1390
XmnI GAANNNNTTC 1 cut(s) 2437
ZrmI AGTACT 2 cut(s) 531, 2691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.