MD05G1298400.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
43189122 .. 43191346
2225 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1298400.v1.1.491

Sequence Viewer

Length: 2058 bp
ATGAAGAGAAACTCACTTACGGGGTTTATTCCGAGCACACTTTGTCCCTTAAGAAACCTTCAGTGGCTTAGCTTAAACCATAATAATTTGACGATTGATACTTCTACTCCAGAAGCAAGCATTCTCTCTTGTTTGGCTAGCCTAAGAAATTTGACAACATTATACTTGGGTAATAATCCATTCAATGGCACGCTTCCGGTGTCTCTTGGGAAATATTTCTCTCCATCCCTTCAGTACCTTGATTTAAGCAGTTGCAACTTAAGGGGAAGCATTCACATGGATATTGGAAACTTGAGCAGCTTGATAGCATTAGCCTTGGATAAGAATCAATTGAGTGGAACAATTCCAACTTCATTAGAAAGGCTACGGAATCTCCAAGTTTTATATTTGAACAATAACAGATTGCAAGGATTCATCCCATCTGAACTTTGTCAACTAGAGAACCTAGCTTATGCAGTATTGGACGGTAATCAACTCTCTGGTCCTATACCTTCCTGCTTGGGCACTCTGGCAGTCGCTCTAAGAAGTCTATCGTTGGGGTCGAATTTGTTAACTTCTACAATACCATCTACCTTGTGGGGACTTGCTGATATATTGTACCTGAACTTGTCATTCAACTCTCTAATTGGATCACTCTCAGAGGACGTTGGAAAACTTCTACCAAGCAGCATTGGGGGTCTTACAAATTTAGTTAATCTCTCCTTGCAAAATAATAACTTTGAAGGCCCTATTCCTAGTTCATGTGGCAACTTGCTTAGCCTAGAACTTTTAGATTTATCAAACAACAATCTGTCTGAAATGATTCCAAAGTCATTGCAAGCACTTGTACACCTCAAGTATCTAAATTTGTCTTCCAATAAACTCCAAGGAGAAATTCCAATGGGCGGGCCCTTCCAAAACTTCTCAGCTCAATCATTTGCTTCGAATGGTTTACTTTGTGGCGTACCCCGACTGAAAGTTCCACCATGCAAAAAAGGTACAGAACAACCGCATTCAAGGAAAGCTGGAGCACCCATCCTGAAATATATTATTCCAGGGGTCTTATCAGCACTGCTCATCGTGGCCGCTGTTTCAACGTTGATATTACGCAGGAAAAGGAATGTGGAAGTTGGAAGGGAGATGGTCTTGTCGCCTCAATTTCAATGGAGAAGAGTTTCACACCTGCAACTTGTAAGGGCGACAAATGGATTTAACGAAAACAGCTTACTTGGCAACGGGGGTTTTGGCTCCGTATATAAAGGAACACTTTCGGATGGGATGGATGTTGCTGTAAAGGTTTTCAATTTACAGATAGAAGGGGCTTTCAAGAGTTTTGATAGTGAATGTGAAGTGATAAGCAATATCCGTCACCGGAATCTTGTCAAAATCATCAGTAGTTGCAGTCAAATTGATTTCAAAGCCCTGGTACTCCAGTACATGCCTAATGGGAGCCTTGAGAAGTGGTTGTATTCTCAAAACTCTTCTTTGAATATCCTACAAAGGTTGAACATAATGATAGATGTCGCATTGGCATTGGAATACCTTCACCATGGTTATTCGATACCTGTTGTGCATTGCGACATGAAGCCAAGCAATATACTACTAGATGAAGATATGGTTGCACATGTTGCTGATTTTGGCATTGCGAAACTCTTGGGTGAAGGAGATTCTTTCACACAAACCATGACCCTAGCGACGATCGGATATATGGCTCCAGAGTATGGCATGGATGGAATTGTTTCCACAAAAGGGGATGTGTACAGTTTTGGTATTGTACTTATGGAAACATTCACAAAAAAGAAGCCAACAGATGAGATGTTTGCTGGGGAAATGAATTTAAAGCAATGGATTTCAAATTCATTATTTCAAGATGCAATTGTTGAAGTTGTGGATGCCAGCTTACTTCGAACGGAGGAAGATCGTGATTTTTCGAGCAAGAGGGATTGTTTATCGTCCATTATGAGATTAGCTCTAGGTTGTTCTGCCGAATTTCCGGAAGAGAGGGTTGGCATGCGAGATTCTGTAGCCACACTCAATAAAATCAAGATTAAGTTTTTGAAGGCCAATGGAGGAAAGTAA

Protein Analysis

686

Amino Acids

74.88

Weight (kDa)

7.51

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 77 - 205 2.3e-07 Leucine-rich repeat region
LRR_8 PF13855 101 - 159 3.7e-07 Leucine rich repeat
LRR_8 PF13855 229 - 288 4.4e-09 Leucine rich repeat
Pkinase PF00069 398 - 666 1.4e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 401 - 667 9.9e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1170
Acc36I ACCTGC 1 cut(s) 1170
AccB7I CCANNNNNTGG 2 cut(s) 185, 1700
AccIII TCCGGA 1 cut(s) 1972
AciI CCGC 3 cut(s) 885, 989, 1065
AclI AACGTT 1 cut(s) 1076
AclWI GGATC 1 cut(s) 637
AcoI YGGCCR 1 cut(s) 1062
AcsI RAATTY 8 cut(s) 148, 544, 685, 844, 873, 1813, 1834, 1967
AcuI CTGAAG 2 cut(s) 44, 215
AfaI GTAC 9 cut(s) 236, 599, 828, 945, 979, 1407, 1415, 1739, 1755
AfiI CCNNNNNNNGG 4 cut(s) 185, 884, 1700, 1728
AflII CTTAAG 2 cut(s) 49, 259
AflIII ACRYGT 1 cut(s) 1603
AjnI CCWGG 2 cut(s) 1033, 1401
AjuI GAANNNNNNNTTGG 4 cut(s) 858, 890, 1968, 2000
AluBI AGCT 8 cut(s) 72, 300, 449, 908, 1004, 1203, 1878, 1949
AluI AGCT 8 cut(s) 72, 300, 449, 908, 1004, 1203, 1878, 1949
Alw21I GWGCWC 2 cut(s) 38, 1012
Alw26I GTCTC 1 cut(s) 207
AlwI GGATC 1 cut(s) 637
Aor13HI TCCGGA 1 cut(s) 1972
AoxI GGCC 4 cut(s) 724, 887, 1062, 2040
ApaI GGGCCC 1 cut(s) 891
ApeKI GCWGC 2 cut(s) 297, 666
ApoI RAATTY 8 cut(s) 148, 544, 685, 844, 873, 1813, 1834, 1967
Asp700I GAANNNNTTC 6 cut(s) 215, 801, 1153, 1246, 1521, 1717
AspS9I GGNCC 4 cut(s) 482, 725, 887, 888
AsuHPI GGTGA 3 cut(s) 1340, 1517, 1649
AsuII TTCGAA 2 cut(s) 923, 1885
AsuNHI GCTAGC 1 cut(s) 137
AvaII GGWCC 1 cut(s) 482
BaeGI GKGCMC 2 cut(s) 506, 891
BaeI ACNNNNGTAYC 2 cut(s) 1397, 1430
BanII GRGCYC 1 cut(s) 891
BbsI GAAGAC 1 cut(s) 843
Bbv12I GWGCWC 2 cut(s) 38, 1012
BbvI GCAGC 2 cut(s) 309, 678
BccI CCATC 8 cut(s) 232, 427, 574, 1022, 1114, 1247, 1252, 1703
BciT130I CCWGG 2 cut(s) 1035, 1403
BcoDI GTCTC 1 cut(s) 207
BfaI CTAG 8 cut(s) 138, 437, 446, 735, 761, 1583, 1670, 1952
BfmI CTRYAG 1 cut(s) 2001
BfrI CTTAAG 2 cut(s) 49, 259
BfuAI ACCTGC 1 cut(s) 1170
BisI GCNGC 3 cut(s) 298, 667, 1065
BlpI GCTNAGC 2 cut(s) 68, 755
BlsI GCNGC 3 cut(s) 299, 668, 1066
Bme1390I CCNGG 2 cut(s) 1035, 1403
Bme18I GGWCC 1 cut(s) 482
BmgT120I GGNCC 4 cut(s) 482, 725, 887, 888
BmiI GGNNCC 4 cut(s) 889, 1228, 1430, 1692
BmrFI CCNGG 2 cut(s) 1035, 1403
BmsI GCATC 2 cut(s) 1840, 1861
BmtI GCTAGC 1 cut(s) 141
BpiI GAAGAC 1 cut(s) 843
BplI GAGNNNNNCTC 2 cut(s) 1933, 1965
BpmI CTGGAG 4 cut(s) 93, 1026, 1394, 1677
Bpu1102I GCTNAGC 2 cut(s) 68, 755
Bpu14I TTCGAA 2 cut(s) 923, 1885
BpuEI CTTGAG 3 cut(s) 313, 818, 1454
BsaBI GATNNNNATC 1 cut(s) 324
BsaJI CCNNGG 5 cut(s) 315, 865, 1034, 1401, 1528
BsaWI WCCGGW 3 cut(s) 196, 1350, 1972
BsaXI ACNNNNNCTCC 4 cut(s) 91, 121, 357, 387
Bsc4I CCNNNNNNNGG 4 cut(s) 185, 884, 1700, 1728
Bse1I ACTGG 1 cut(s) 1411
Bse3DI GCAATG 4 cut(s) 812, 1552, 1620, 1829
Bse8I GATNNNNATC 1 cut(s) 324
BseAI TCCGGA 1 cut(s) 1972
BseBI CCWGG 2 cut(s) 1035, 1403
BseDI CCNNGG 5 cut(s) 315, 865, 1034, 1401, 1528
BseGI GGATG 9 cut(s) 224, 414, 1014, 1258, 1263, 1267, 1714, 1738, 1876
BseJI GATNNNNATC 1 cut(s) 324
BseLI CCNNNNNNNGG 4 cut(s) 185, 884, 1700, 1728
BseMI GCAATG 4 cut(s) 812, 1552, 1620, 1829
BseMII CTCAG 2 cut(s) 651, 918
BseNI ACTGG 1 cut(s) 1411
BseSI GKGCMC 2 cut(s) 506, 891
BseXI GCAGC 2 cut(s) 309, 678
BseYI CCCAGC 1 cut(s) 1802
Bsh1285I CGRYCG 1 cut(s) 1680
BshFI GGCC 4 cut(s) 726, 889, 1064, 2042
BsiEI CGRYCG 1 cut(s) 1680
BsiHKAI GWGCWC 2 cut(s) 38, 1012
BsiSI CCGG 3 cut(s) 197, 1351, 1973
BslFI GGGAC 2 cut(s) 30, 594
BslI CCNNNNNNNGG 4 cut(s) 185, 884, 1700, 1728
BsmAI GTCTC 1 cut(s) 207
BsmFI GGGAC 2 cut(s) 30, 594
BsmI GAATGC 3 cut(s) 120, 270, 991
BsnI GGCC 4 cut(s) 726, 889, 1064, 2042
Bsp119I TTCGAA 2 cut(s) 923, 1885
Bsp120I GGGCCC 1 cut(s) 887
Bsp1286I GDGCHC 4 cut(s) 38, 506, 891, 1012
Bsp13I TCCGGA 1 cut(s) 1972
Bsp1407I TGTACA 2 cut(s) 826, 1737
Bsp143I GATC 3 cut(s) 629, 1677, 1897
Bsp1720I GCTNAGC 2 cut(s) 68, 755
Bsp19I CCATGG 1 cut(s) 1528
BspACI CCGC 3 cut(s) 885, 989, 1065
BspANI GGCC 4 cut(s) 726, 889, 1064, 2042
BspCNI CTCAG 2 cut(s) 650, 917
BspEI TCCGGA 1 cut(s) 1972
BspLI GGNNCC 4 cut(s) 889, 1228, 1430, 1692
BspMI ACCTGC 1 cut(s) 1170
BspOI GCTAGC 1 cut(s) 141
BspPI GGATC 1 cut(s) 637
BspT104I TTCGAA 2 cut(s) 923, 1885
BspTI CTTAAG 2 cut(s) 49, 259
BsrDI GCAATG 4 cut(s) 812, 1552, 1620, 1829
BsrGI TGTACA 2 cut(s) 826, 1737
BsrI ACTGG 1 cut(s) 1411
BssECI CCNNGG 5 cut(s) 315, 865, 1034, 1401, 1528
BssMI GATC 3 cut(s) 629, 1677, 1897
BssT1I CCWWGG 3 cut(s) 315, 865, 1528
Bst2UI CCWGG 2 cut(s) 1035, 1403
Bst4CI ACNGT 2 cut(s) 467, 1742
Bst6I CTCTTC 3 cut(s) 1144, 1465, 1971
BstAFI CTTAAG 2 cut(s) 49, 259
BstAPI GCANNNNNTGC 1 cut(s) 1607
BstAUI TGTACA 2 cut(s) 826, 1737
BstBI TTCGAA 2 cut(s) 923, 1885
BstC8I GCNNGC 7 cut(s) 118, 139, 191, 819, 887, 1876, 1991
BstDEI CTNAG 6 cut(s) 68, 143, 521, 637, 755, 904
BstDSI CCRYGG 1 cut(s) 1528
BstF5I GGATG 9 cut(s) 224, 414, 1014, 1258, 1263, 1267, 1714, 1738, 1876
BstKTI GATC 3 cut(s) 632, 1680, 1900
BstMAI GTCTC 1 cut(s) 207
BstMBI GATC 3 cut(s) 629, 1677, 1897
BstMCI CGRYCG 1 cut(s) 1680
BstMWI GCNNNNNNNGC 2 cut(s) 1209, 1607
BstNI CCWGG 2 cut(s) 1035, 1403
BstNSI RCATGY 3 cut(s) 1420, 1607, 1993
BstSCI CCNGG 2 cut(s) 1033, 1401
BstSFI CTRYAG 1 cut(s) 2001
BstSLI GKGCMC 2 cut(s) 506, 891
BstV1I GCAGC 2 cut(s) 309, 678
BstV2I GAAGAC 1 cut(s) 843
BsuRI GGCC 4 cut(s) 726, 889, 1064, 2042
BtgI CCRYGG 1 cut(s) 1528
BtsCI GGATG 9 cut(s) 224, 414, 1014, 1258, 1263, 1267, 1714, 1738, 1876
BtsI GCAGTG 1 cut(s) 1049
BtsIMutI CAGTG 2 cut(s) 68, 1049
BveI ACCTGC 1 cut(s) 1170
Cac8I GCNNGC 7 cut(s) 118, 139, 191, 819, 887, 1876, 1991
Cfr13I GGNCC 4 cut(s) 482, 725, 887, 888
Csp6I GTAC 9 cut(s) 235, 598, 827, 944, 978, 1406, 1414, 1738, 1754
CviQI GTAC 9 cut(s) 235, 598, 827, 944, 978, 1406, 1414, 1738, 1754
DdeI CTNAG 6 cut(s) 68, 143, 521, 637, 755, 904
DpnI GATC 3 cut(s) 631, 1679, 1899
DpnII GATC 3 cut(s) 629, 1677, 1897
DraI TTTAAA 1 cut(s) 1818
EaeI YGGCCR 1 cut(s) 1062
Eam1104I CTCTTC 3 cut(s) 1144, 1465, 1971
EarI CTCTTC 3 cut(s) 1144, 1465, 1971
Eco130I CCWWGG 3 cut(s) 315, 865, 1528
Eco24I GRGCYC 1 cut(s) 891
Eco47I GGWCC 1 cut(s) 482
Eco57I CTGAAG 2 cut(s) 44, 215
EcoO109I RGGNCCY 2 cut(s) 725, 888
EcoRII CCWGG 2 cut(s) 1033, 1401
EcoT14I CCWWGG 3 cut(s) 315, 865, 1528
EcoT38I GRGCYC 1 cut(s) 891
ErhI CCWWGG 3 cut(s) 315, 865, 1528
FalI AAGNNNNNCTT 2 cut(s) 1230, 1262
FaqI GGGAC 2 cut(s) 30, 594
FauI CCCGC 1 cut(s) 878
Fnu4HI GCNGC 3 cut(s) 298, 667, 1065
FokI GGATG 9 cut(s) 211, 401, 1001, 1265, 1270, 1274, 1721, 1745, 1883
FriOI GRGCYC 1 cut(s) 891
Fsp4HI GCNGC 3 cut(s) 298, 667, 1065
FspBI CTAG 8 cut(s) 138, 437, 446, 735, 761, 1583, 1670, 1952
GluI GCNGC 3 cut(s) 298, 667, 1065
GsaI CCCAGC 1 cut(s) 1806
GsuI CTGGAG 4 cut(s) 93, 1026, 1394, 1677
HaeIII GGCC 4 cut(s) 726, 889, 1064, 2042
HapII CCGG 3 cut(s) 197, 1351, 1973
HincII GTYRAC 2 cut(s) 434, 552
HindII GTYRAC 2 cut(s) 434, 552
HinfI GANTC 7 cut(s) 325, 370, 411, 802, 1354, 1646, 1997
HpaI GTTAAC 1 cut(s) 552
HpaII CCGG 3 cut(s) 197, 1351, 1973
HphI GGTGA 3 cut(s) 1340, 1517, 1649
Hpy166II GTNNAC 5 cut(s) 434, 552, 829, 932, 1738
Hpy188I TCNGA 6 cut(s) 33, 424, 640, 796, 1252, 1682
Hpy188III TCNNGA 8 cut(s) 110, 1018, 1306, 1694, 1847, 1901, 1973, 2023
Hpy8I GTNNAC 5 cut(s) 434, 552, 829, 932, 1738
Hpy99I CGWCG 1 cut(s) 1678
HpyCH4III ACNGT 2 cut(s) 467, 1742
HpyCH4IV ACGT 2 cut(s) 645, 1076
HpyF10VI GCNNNNNNNGC 2 cut(s) 1209, 1607
HpyF3I CTNAG 6 cut(s) 68, 143, 521, 637, 755, 904
HpySE526I ACGT 2 cut(s) 645, 1076
Kpn2I TCCGGA 1 cut(s) 1972
KspAI GTTAAC 1 cut(s) 552
Kzo9I GATC 3 cut(s) 629, 1677, 1897
LmnI GCTCC 4 cut(s) 1007, 1232, 1428, 1696
Lsp1109I GCAGC 2 cut(s) 309, 678
LweI GCATC 2 cut(s) 1840, 1861
MaeI CTAG 8 cut(s) 138, 437, 446, 735, 761, 1583, 1670, 1952
MaeII ACGT 2 cut(s) 645, 1076
MaeIII GTNAC 1 cut(s) 1346
MalI GATC 3 cut(s) 631, 1679, 1899
MboI GATC 3 cut(s) 629, 1677, 1897
MboII GAAGA 7 cut(s) 16, 843, 1161, 1452, 1601, 1907, 1988
MfeI CAATTG 2 cut(s) 329, 1854
MhlI GDGCHC 4 cut(s) 38, 506, 891, 1012
MmeI TCCRAC 3 cut(s) 371, 628, 1090
MnlI CCTC 7 cut(s) 634, 842, 1143, 1885, 1911, 1974, 2042
MroI TCCGGA 1 cut(s) 1972
MroXI GAANNNNTTC 6 cut(s) 215, 801, 1153, 1246, 1521, 1717
MseI TTAA 9 cut(s) 50, 74, 245, 260, 551, 693, 1191, 1817, 2028
MslI CAYNNNNRTG 1 cut(s) 275
MspA1I CMGCKG 1 cut(s) 1067
MspCI CTTAAG 2 cut(s) 49, 259
MspI CCGG 3 cut(s) 197, 1351, 1973
MspR9I CCNGG 2 cut(s) 1035, 1403
MunI CAATTG 2 cut(s) 329, 1854
Mva1269I GAATGC 3 cut(s) 120, 270, 991
MvaI CCWGG 2 cut(s) 1035, 1403
MwoI GCNNNNNNNGC 2 cut(s) 1209, 1607
NcoI CCATGG 1 cut(s) 1528
NdeII GATC 3 cut(s) 629, 1677, 1897
NheI GCTAGC 1 cut(s) 137
NlaIV GGNNCC 4 cut(s) 889, 1228, 1430, 1692
NmuCI GTSAC 1 cut(s) 1346
NspI RCATGY 3 cut(s) 1420, 1607, 1993
NspV TTCGAA 2 cut(s) 923, 1885
PaeI GCATGC 1 cut(s) 1993
PaqCI CACCTGC 1 cut(s) 1170
PciI ACATGT 1 cut(s) 1603
PcsI WCGNNNNNNNCGW 1 cut(s) 539
PctI GAATGC 3 cut(s) 120, 270, 991
PdmI GAANNNNTTC 6 cut(s) 215, 801, 1153, 1246, 1521, 1717
PfeI GAWTC 7 cut(s) 325, 370, 411, 802, 1354, 1646, 1997
PflMI CCANNNNNTGG 2 cut(s) 185, 1700
PkrI GCNGC 3 cut(s) 299, 668, 1066
Ple19I CGATCG 1 cut(s) 1680
PscI ACATGT 1 cut(s) 1603
Psp1406I AACGTT 1 cut(s) 1076
Psp6I CCWGG 2 cut(s) 1033, 1401
PspFI CCCAGC 1 cut(s) 1802
PspGI CCWGG 2 cut(s) 1033, 1401
PspN4I GGNNCC 4 cut(s) 889, 1228, 1430, 1692
PspOMI GGGCCC 1 cut(s) 887
PspPI GGNCC 4 cut(s) 482, 725, 887, 888
PvuI CGATCG 1 cut(s) 1680
RsaI GTAC 9 cut(s) 236, 599, 828, 945, 979, 1407, 1415, 1739, 1755
RsaNI GTAC 9 cut(s) 235, 598, 827, 944, 978, 1406, 1414, 1738, 1754
RseI CAYNNNNRTG 1 cut(s) 275
SaqAI TTAA 9 cut(s) 50, 74, 245, 260, 551, 693, 1191, 1817, 2028
SatI GCNGC 3 cut(s) 298, 667, 1065
Sau3AI GATC 3 cut(s) 629, 1677, 1897
Sau96I GGNCC 4 cut(s) 482, 725, 887, 888
ScrFI CCNGG 2 cut(s) 1035, 1403
SduI GDGCHC 4 cut(s) 38, 506, 891, 1012
SfaNI GCATC 2 cut(s) 1840, 1861
SfcI CTRYAG 1 cut(s) 2001
SfuI TTCGAA 2 cut(s) 923, 1885
SinI GGWCC 1 cut(s) 482
SmiMI CAYNNNNRTG 1 cut(s) 275
SmlI CTYRAG 5 cut(s) 49, 259, 292, 833, 1433
SmoI CTYRAG 5 cut(s) 49, 259, 292, 833, 1433
SphI GCATGC 1 cut(s) 1993
SsiI CCGC 3 cut(s) 885, 989, 1065
SspI AATATT 1 cut(s) 215
SspMI CTAG 8 cut(s) 138, 437, 446, 735, 761, 1583, 1670, 1952
StyD4I CCNGG 2 cut(s) 1033, 1401
StyI CCWWGG 3 cut(s) 315, 865, 1528
TaaI ACNGT 2 cut(s) 467, 1742
TaiI ACGT 2 cut(s) 648, 1079
TaqI TCGA 5 cut(s) 542, 923, 1538, 1885, 1910
TatI WGTACW 4 cut(s) 826, 1413, 1737, 1753
TauI GCSGC 1 cut(s) 1067
TfiI GAWTC 7 cut(s) 325, 370, 411, 802, 1354, 1646, 1997
Tru1I TTAA 9 cut(s) 50, 74, 245, 260, 551, 693, 1191, 1817, 2028
Tru9I TTAA 9 cut(s) 50, 74, 245, 260, 551, 693, 1191, 1817, 2028
TscAI CASTG 2 cut(s) 68, 1056
TseFI GTSAC 1 cut(s) 1346
TseI GCWGC 2 cut(s) 297, 666
Tsp45I GTSAC 1 cut(s) 1346
TspDTI ATGAA 8 cut(s) 17, 342, 403, 729, 1577, 1602, 1826, 1827
TspGWI ACGGA 4 cut(s) 382, 1219, 1334, 1904
TspRI CASTG 2 cut(s) 68, 1056
Van91I CCANNNNNTGG 2 cut(s) 185, 1700
Vha464I CTTAAG 2 cut(s) 49, 259
VpaK11BI GGWCC 1 cut(s) 482
XapI RAATTY 8 cut(s) 148, 544, 685, 844, 873, 1813, 1834, 1967
XceI RCATGY 3 cut(s) 1420, 1607, 1993
XcmI CCANNNNNNNNNTGG 1 cut(s) 573
XmnI GAANNNNTTC 6 cut(s) 215, 801, 1153, 1246, 1521, 1717
XspI CTAG 8 cut(s) 138, 437, 446, 735, 761, 1583, 1670, 1952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.