Rh5DG085700

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
7513967 .. 7518665
4699 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG085700.1

Sequence Viewer

Length: 3417 bp
ATGGAGAGAATTACTTGGTTCTTCCTGGCCGCGGCTAGCTGCTTAACCATGGCAGCAGCACAAACCAATAGTAATCTCACCATAGACGAGTATGCTCTTCTTGCTCTCAAAGCCCGTATCACCAGTGACCCTCAGAATATTATTTTCACCAACTGGTCAACCACCACCCCTGTTTGCAACTGGGTTGGTGTCACTTGTGGTGCACGCCATCATCGAGTCGCAAGCCTAAACCTCTCTTACATGGGACTCACAAGCACCATTCCTCCGGAACTTGGCAACCTTTCATTTCTTGTTAGGCTAAGCTTTAAAAATAATAGTTTTCACGGTACCTTGCCTCCAGAGTTGGCTCGTCTGCGGAGATTAAAGTTCATTACCTTTGGTTTCAACAACTTTATGGGTATCATTCCGTCATGGTTCGGGTCCTTATCAAAACTTCAAGCCTTTTATTTGTATGGTAATCAGTTTTCTGGTTACATACCCAGTGCCATCTTCAACTTATCAGCACTCGAAGTAATTGATTTGAAGTATAACCAGCTATCAGGTAGCATACCCGCTGCCATCTTCAACTTATCAGCACTCGAAGTAATTAATTTGAGCTATAACCAGCTATCAGGTAGCATACCAAGAGAAATCGGAAACCTAACAGTGTTGAAGGAGATATACCTTGATAGTAATAATTTCAAAGAACTTCCGAATGAGATTGGCAATTTGGATCAATTAGAAGAATTGTATGTGCAAAACAATGCCTTACAAGGGCCTCTTCCTATGGTTGTCTTCAACATGTCGTCTTTAACAACTTTGACCTTCTTTGGAAACAACTTGACTGGTAGTCTTCCGGACAATATATGTCAATATCTTCCGAGCATTCAAACCTTGAGTTTGTCAAAAAACCAACTTATCGGTCCACTCTCATCCAGATGGTCGCAATGCAAACAACTTCTTTCATTAGAATTGGGGATGAATACTTTCAGTGGAAGCATACCCACCAATATTGCCAATTTGACCCAAATACAGCAGATTGTCCTTAGCACAAACTATTTGACAGGTACTATACCACATGAGATTGGTTATCTTCCGAATTTAGAGACATTGAGCCTCGGAACTAATAATCTCAATGGCGTCATCCCATTTCCAATTTTCAATACTTCCACTATAACATTATTAGATCTTACTGCTAATGATCTCTTAGGTAGCCTCCCAACAAAGATAGGCCTTGAGCTTCCAAACCTACTAGAGCTCTATCTAGGAGGAAATAAACTCAGCGGAGTAATCCCCAAGTCCATCTCCAATGCTTCTCAGCTCACGATCATAGATCTGGGAGATAACTTCCTTTCTGGCTTTATTCCTAGCACGCTATGTACCTTAACAAAGCTTGAGGTGCTTTCCTTATTCCAGAATAATTTAACCCTTGATACTTCTATTCCAGATGTAGATATTCTCTCTTGTTTGCCAAATCTTAAAAAATTGGTAGAATTCCAAATCATAAACAATCCATTAAATGCCAAACTTCCGATTTCCTTTTGGAATTTCTCTACATCACTTCACATTGTCAAACTAGGGAATTGCAAAATGAGAGGTAACATCCCCAATGAGATAGGCCACTTGAGCAGCTTGATACACTTAGATCTGGGAGAAAATGAACTAAGTGGACCGGTTCCGACCTCAATGGGAAGATTGCAAAACCTCCAAATTTTGGATTTGAGTGGTAACAAATTGCAAGGACACATTCCAGATGAGCTTTGTCAACTGAACCATCTTGGTGAGTTATCATTGTATGGGAATCAACTTTCAGGTTCAATACCTTCATGCTTGGGTAATCTAACAGCAACCCTAAGAAGTTTATTATTAGGGTCTAATATGTTGAATCTCACAATACCATCTACCTTGTGGAGACTCACAGATATCTTGAAATTAGACTTATCATCCAATTCACTAATTGGACCTGTCTCGGAAGGTGTTGGTAATTTGAAAGTTGCCACACTTATAGAGTTATCAAACAACCAATTCTCTGGTAGTATACCAAACAGCATTGGGAGCCTTCAGAATTTGGTCCATCTCTCTTTGGCAAATAATAATTTACAAGGACTAATTCCAAGTTCAGTTGGCAAGTCGATCAGCTTGGAATTTTTGGATTTATCCATAAACAATTTGTCAGGAGTGATTCCCAAGTCTCTTGAATCACTCCCATATCTCAAGTATCTGAATTTGTCTTTCAATAAACTCAAAGGAGAAATTCCAACCGGCGGACCTTTCAAAAACTTTTCTGCTCAATCTTTTGTTTCGAACCATGGACTCTGTGTGCATGGTGCATCCCAATTTCATGTTCCACCATGTAAAAGGAAAACTAGCAGATCTATCTTGAAATATGTCATTCCAGGGATCTTGTCACCGATGCTTCTTTTGACCATCTTAATTTGGATGGTCATGTTATGCAGAAAAAAGGATGTGGAAGCTCCAACAGAGACTGCTCTTTTGGCTCAACGTGAATGGAAAAGAGTTTCATACAAAGAAATTGTTAGTGTGACAAATGGATTTAATCTAAGAAACTTACTTGGGAGGGGGGGTTTTGGCTCGGTATATAGAGGAAGACTGTCGGATGGAATAGATGTTGCTATAAAGGTTTTTAATTCAGAGACAGAAAGGGCATTTACAAGTTTTGAGGTTGAATGTGAAATGCTAAGCAATCTTCGTCACCGAAATCTTGTCAAAGTCATTAGTTGCTGCAGTGAAATTGATTTCAAAGCTCTTATACTGAGTTTCATGCCTAATGGGAGCCTGGAAAAGTGGTTGTATTCTCCGAATTGTTCTTTGAACATGCTGCAGAGGTTGGATATAATGATAGATGTTGCATCGGCATTGGAGTATCTCCATCATGGTTATGATGTACCTATTGTCCATTGTGATTTGAAGCCAAGCAATATACTACTAGATGATGATATGGGTGCACATGTTTCTGATTTTGGCATTGCAAAATTCCTAAATGGAGGAGATTCTATGACTCAAACCATGACCCTAGCCACAATTGGGTATATGGCTCCAGAGTATGGAATGGAAGGAAAAGTTTCGAGAAAGGGGGATGTGTATAGTTTTGGTATTGTAGTAATGGAAACATTCACAAGAAGGAATCCAACAGATGAAATGTTTGTTGGGGATATGAGTTTAAAGCAATGGGTTGCGAATTCACTATATCAAGATGCAATAGTTGATGTTGTTGATGCCAAGCTACTTGGGACAGAGGAAGATCATGATTTTGTGGGCAATAGAGAATGTTTATCATCCATTATGACATTAGCTCTTGGTTGTTCAGCAGAATCACCAGAAGAGAGGATAAATATGCAAGAGGCTCTAGCCACACTCAATAAAATCAAGATCAAGCTTACAAAGAAAGTTCCAGGAAGTATGCTTCCAAAGAAGTGA

Protein Analysis

1138

Amino Acids

124.98

Weight (kDa)

6.14

Isoelectric Point (pI)

31.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 29 - 66 6.6e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 121 - 179 5.7e-07 Leucine rich repeat
LRR_14 PF23598 165 - 269 5.8e-11 Leucine-rich repeat region
LRR_8 PF13855 184 - 227 1.5e-06 Leucine rich repeat
LRR_8 PF13855 385 - 442 3e-06 Leucine rich repeat
LRR_8 PF13855 408 - 468 1.2e-07 Leucine rich repeat
LRR_14 PF23598 513 - 638 7.1e-09 Leucine-rich repeat region
LRR_8 PF13855 532 - 572 6.1e-06 Leucine rich repeat
LRR_8 PF13855 537 - 596 3.4e-06 Leucine rich repeat
LRR_14 PF23598 635 - 741 5.6e-06 Leucine-rich repeat region
LRR_8 PF13855 682 - 741 6.7e-08 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 847 - 1117 3.2e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 847 - 1117 2.9e-41 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 326
AccB1I GGYRCC 1 cut(s) 326
AccB7I CCANNNNNTGG 2 cut(s) 1693, 3044
AccI GTMKAC 1 cut(s) 2017
AccII CGCG 1 cut(s) 32
AccIII TCCGGA 2 cut(s) 265, 835
AciI CCGC 6 cut(s) 30, 32, 355, 552, 1263, 2244
AclWI GGATC 2 cut(s) 720, 2387
AcoI YGGCCR 1 cut(s) 27
AcuI CTGAAG 1 cut(s) 2024
AcyI GRCGYC 1 cut(s) 1119
AfaI GTAC 4 cut(s) 328, 1048, 1360, 2886
AfiI CCNNNNNNNGG 7 cut(s) 31, 272, 753, 1693, 2243, 3024, 3044
AflIII ACRYGT 2 cut(s) 780, 2947
AgeI ACCGGT 1 cut(s) 1651
AhdI GACNNNNNGTC 1 cut(s) 828
AjnI CCWGG 4 cut(s) 24, 2374, 2775, 3391
AjuI GAANNNNNNNTTGG 4 cut(s) 2307, 2339, 3129, 3161
Alw21I GWGCWC 3 cut(s) 205, 1239, 2947
Alw26I GTCTC 6 cut(s) 1079, 1885, 1951, 2175, 2456, 2627
Alw44I GTGCAC 2 cut(s) 201, 2943
AlwI GGATC 2 cut(s) 720, 2387
AlwNI CAGNNNCTG 1 cut(s) 2465
Aor13HI TCCGGA 2 cut(s) 265, 835
AoxI GGCC 4 cut(s) 27, 755, 1210, 1597
ApaLI GTGCAC 2 cut(s) 201, 2943
ApeKI GCWGC 7 cut(s) 39, 53, 56, 554, 1608, 2721, 2818
ArsI GACNNNNNNTTYG 2 cut(s) 2455, 2487
AseI ATTAAT 1 cut(s) 588
AsiGI ACCGGT 1 cut(s) 1651
Asp700I GAANNNNTTC 2 cut(s) 965, 3061
Asp718I GGTACC 1 cut(s) 326
AspS9I GGNCC 7 cut(s) 420, 755, 902, 1649, 1940, 2050, 2246
AsuHPI GGTGA 7 cut(s) 70, 112, 139, 1772, 2379, 2684, 3306
AsuII TTCGAA 1 cut(s) 2282
AsuNHI GCTAGC 1 cut(s) 35
AvaII GGWCC 6 cut(s) 420, 902, 1649, 1940, 2050, 2246
BaeGI GKGCMC 2 cut(s) 205, 2947
BanI GGYRCC 1 cut(s) 326
BanII GRGCYC 1 cut(s) 1239
BarI GAAGNNNNNNTAC 2 cut(s) 644, 676
BbsI GAAGAC 3 cut(s) 766, 824, 2593
Bbv12I GWGCWC 3 cut(s) 205, 1239, 2947
BbvI GCAGC 7 cut(s) 26, 65, 68, 541, 1620, 2708, 2805
BciT130I CCWGG 4 cut(s) 26, 2376, 2777, 3393
BcoDI GTCTC 6 cut(s) 1079, 1885, 1951, 2175, 2456, 2627
BfaI CTAG 9 cut(s) 36, 1232, 1244, 1347, 1556, 2346, 2927, 3014, 3347
BfmI CTRYAG 2 cut(s) 2722, 2819
BglII AGATCT 4 cut(s) 1165, 1312, 1624, 2351
BisI GCNGC 9 cut(s) 30, 33, 40, 54, 57, 555, 1609, 2722, 2819
BlpI GCTNAGC 2 cut(s) 299, 2678
BlsI GCNGC 9 cut(s) 31, 34, 41, 55, 58, 556, 1610, 2723, 2820
Bme1390I CCNGG 4 cut(s) 26, 2376, 2777, 3393
Bme18I GGWCC 6 cut(s) 420, 902, 1649, 1940, 2050, 2246
BmeRI GACNNNNNGTC 1 cut(s) 828
BmgT120I GGNCC 7 cut(s) 420, 755, 902, 1649, 1940, 2050, 2246
BmiI GGNNCC 6 cut(s) 328, 421, 1656, 2036, 2774, 3036
BmrFI CCNGG 4 cut(s) 26, 2376, 2777, 3393
BmrI ACTGGG 2 cut(s) 190, 474
BmsI GCATC 5 cut(s) 2318, 2382, 2858, 3184, 3205
BmtI GCTAGC 1 cut(s) 39
BmuI ACTGGG 2 cut(s) 190, 474
BpiI GAAGAC 3 cut(s) 766, 824, 2593
BpmI CTGGAG 2 cut(s) 321, 3021
Bpu10I CCTNAGC 1 cut(s) 1025
Bpu1102I GCTNAGC 2 cut(s) 299, 2678
Bpu14I TTCGAA 1 cut(s) 2282
BpuEI CTTGAG 5 cut(s) 895, 1235, 1394, 1624, 2177
BsaHI GRCGYC 1 cut(s) 1119
BsaJI CCNNGG 5 cut(s) 30, 48, 1096, 2287, 2375
BsaWI WCCGGW 3 cut(s) 265, 835, 1651
BsaXI ACNNNNNCTCC 6 cut(s) 247, 277, 319, 349, 2548, 2578
Bsc4I CCNNNNNNNGG 7 cut(s) 31, 272, 753, 1693, 2243, 3024, 3044
Bse118I RCCGGY 2 cut(s) 1651, 2240
Bse1I ACTGG 5 cut(s) 123, 158, 185, 480, 829
Bse3DI GCAATG 3 cut(s) 932, 2964, 3173
BseAI TCCGGA 2 cut(s) 265, 835
BseBI CCWGG 4 cut(s) 26, 2376, 2777, 3393
BseDI CCNNGG 5 cut(s) 30, 48, 1096, 2287, 2375
BseLI CCNNNNNNNGG 7 cut(s) 31, 272, 753, 1693, 2243, 3024, 3044
BseMI GCAATG 3 cut(s) 932, 2964, 3173
BseMII CTCAG 4 cut(s) 146, 1273, 1310, 2744
BseNI ACTGG 5 cut(s) 123, 158, 185, 480, 829
BseRI GAGGAG 1 cut(s) 3000
BseSI GKGCMC 2 cut(s) 205, 2947
BseXI GCAGC 7 cut(s) 26, 65, 68, 541, 1620, 2708, 2805
Bsh1236I CGCG 1 cut(s) 32
BshFI GGCC 4 cut(s) 29, 757, 1212, 1599
BshNI GGYRCC 1 cut(s) 326
BshTI ACCGGT 1 cut(s) 1651
BsiHKAI GWGCWC 3 cut(s) 205, 1239, 2947
BsiSI CCGG 4 cut(s) 266, 836, 1652, 2241
BslFI GGGAC 2 cut(s) 258, 3244
BslI CCNNNNNNNGG 7 cut(s) 31, 272, 753, 1693, 2243, 3024, 3044
BsmAI GTCTC 6 cut(s) 1079, 1885, 1951, 2175, 2456, 2627
BsmFI GGGAC 2 cut(s) 258, 3244
BsmI GAATGC 1 cut(s) 864
BsnI GGCC 4 cut(s) 29, 757, 1212, 1599
Bsp119I TTCGAA 1 cut(s) 2282
Bsp1286I GDGCHC 3 cut(s) 205, 1239, 2947
Bsp13I TCCGGA 2 cut(s) 265, 835
Bsp1720I GCTNAGC 2 cut(s) 299, 2678
Bsp19I CCATGG 2 cut(s) 48, 2287
BspACI CCGC 6 cut(s) 30, 32, 355, 552, 1263, 2244
BspANI GGCC 4 cut(s) 29, 757, 1212, 1599
BspCNI CTCAG 4 cut(s) 145, 1272, 1309, 2745
BspEI TCCGGA 2 cut(s) 265, 835
BspFNI CGCG 1 cut(s) 32
BspHI TCATGA 1 cut(s) 3244
BspLI GGNNCC 6 cut(s) 328, 421, 1656, 2036, 2774, 3036
BspMAI CTGCAG 2 cut(s) 2726, 2823
BspOI GCTAGC 1 cut(s) 39
BspPI GGATC 2 cut(s) 720, 2387
BspQI GCTCTTC 1 cut(s) 102
BspT104I TTCGAA 1 cut(s) 2282
BspT107I GGYRCC 1 cut(s) 326
BsrDI GCAATG 3 cut(s) 932, 2964, 3173
BsrFI RCCGGY 2 cut(s) 1651, 2240
BsrI ACTGG 5 cut(s) 123, 158, 185, 480, 829
BssAI RCCGGY 2 cut(s) 1651, 2240
BssECI CCNNGG 5 cut(s) 30, 48, 1096, 2287, 2375
BssNAI GTATAC 1 cut(s) 2018
BssNI GRCGYC 1 cut(s) 1119
BssT1I CCWWGG 2 cut(s) 48, 2287
Bst1107I GTATAC 1 cut(s) 2018
Bst2UI CCWGG 4 cut(s) 26, 2376, 2777, 3393
Bst4CI ACNGT 3 cut(s) 326, 646, 2592
Bst6I CTCTTC 3 cut(s) 102, 765, 3315
BstACI GRCGYC 1 cut(s) 1119
BstBI TTCGAA 1 cut(s) 2282
BstC8I GCNNGC 4 cut(s) 37, 205, 223, 1352
BstDSI CCRYGG 3 cut(s) 30, 48, 2287
BstFNI CGCG 1 cut(s) 32
BstMAI GTCTC 6 cut(s) 1079, 1885, 1951, 2175, 2456, 2627
BstMWI GCNNNNNNNGC 6 cut(s) 101, 110, 1378, 1605, 2034, 2474
BstNI CCWGG 4 cut(s) 26, 2376, 2777, 3393
BstNSI RCATGY 3 cut(s) 784, 2818, 2951
BstSCI CCNGG 4 cut(s) 24, 2374, 2775, 3391
BstSFI CTRYAG 2 cut(s) 2722, 2819
BstSLI GKGCMC 2 cut(s) 205, 2947
BstUI CGCG 1 cut(s) 32
BstV1I GCAGC 7 cut(s) 26, 65, 68, 541, 1620, 2708, 2805
BstV2I GAAGAC 3 cut(s) 766, 824, 2593
BstX2I RGATCY 5 cut(s) 1165, 1312, 1624, 2351, 2379
BstXI CCANNNNNNTGG 1 cut(s) 2009
BstYI RGATCY 5 cut(s) 1165, 1312, 1624, 2351, 2379
BstZ17I GTATAC 1 cut(s) 2018
BsuRI GGCC 4 cut(s) 29, 757, 1212, 1599
BtgI CCRYGG 3 cut(s) 30, 48, 2287
BtsI GCAGTG 1 cut(s) 2731
BtsIMutI CAGTG 5 cut(s) 130, 487, 651, 976, 2731
Cac8I GCNNGC 4 cut(s) 37, 205, 223, 1352
CaiI CAGNNNCTG 1 cut(s) 2465
CciI TCATGA 1 cut(s) 3244
Cfr10I RCCGGY 2 cut(s) 1651, 2240
Cfr13I GGNCC 7 cut(s) 420, 755, 902, 1649, 1940, 2050, 2246
Cfr42I CCGCGG 1 cut(s) 33
CseI GACGC 1 cut(s) 1108
Csp6I GTAC 4 cut(s) 327, 1047, 1359, 2885
CspAI ACCGGT 1 cut(s) 1651
CspCI CAANNNNNGTGG 2 cut(s) 973, 1008
CviQI GTAC 4 cut(s) 327, 1047, 1359, 2885
DraI TTTAAA 2 cut(s) 307, 3162
DriI GACNNNNNGTC 1 cut(s) 828
EaeI YGGCCR 1 cut(s) 27
Eam1104I CTCTTC 3 cut(s) 102, 765, 3315
Eam1105I GACNNNNNGTC 1 cut(s) 828
EarI CTCTTC 3 cut(s) 102, 765, 3315
EciI GGCGGA 1 cut(s) 2259
Ecl136II GAGCTC 1 cut(s) 1237
Eco130I CCWWGG 2 cut(s) 48, 2287
Eco147I AGGCCT 1 cut(s) 1212
Eco24I GRGCYC 1 cut(s) 1239
Eco32I GATATC 1 cut(s) 1903
Eco47I GGWCC 6 cut(s) 420, 902, 1649, 1940, 2050, 2246
Eco53kI GAGCTC 1 cut(s) 1237
Eco57I CTGAAG 1 cut(s) 2024
EcoICRI GAGCTC 1 cut(s) 1237
EcoO109I RGGNCCY 2 cut(s) 420, 755
EcoRI GAATTC 2 cut(s) 1472, 3178
EcoRII CCWGG 4 cut(s) 24, 2374, 2775, 3391
EcoRV GATATC 1 cut(s) 1903
EcoT14I CCWWGG 2 cut(s) 48, 2287
EcoT38I GRGCYC 1 cut(s) 1239
ErhI CCWWGG 2 cut(s) 48, 2287
FalI AAGNNNNNCTT 2 cut(s) 744, 776
FaqI GGGAC 2 cut(s) 258, 3244
FauI CCCGC 1 cut(s) 559
FblI GTMKAC 1 cut(s) 2017
Fnu4HI GCNGC 9 cut(s) 30, 33, 40, 54, 57, 555, 1609, 2722, 2819
FriOI GRGCYC 1 cut(s) 1239
Fsp4HI GCNGC 9 cut(s) 30, 33, 40, 54, 57, 555, 1609, 2722, 2819
FspBI CTAG 9 cut(s) 36, 1232, 1244, 1347, 1556, 2346, 2927, 3014, 3347
GluI GCNGC 9 cut(s) 30, 33, 40, 54, 57, 555, 1609, 2722, 2819
GsuI CTGGAG 2 cut(s) 321, 3021
HaeIII GGCC 4 cut(s) 29, 757, 1212, 1599
HapII CCGG 4 cut(s) 266, 836, 1652, 2241
HgaI GACGC 1 cut(s) 1108
Hin1I GRCGYC 1 cut(s) 1119
HincII GTYRAC 2 cut(s) 159, 1745
HindII GTYRAC 2 cut(s) 159, 1745
HindIII AAGCTT 3 cut(s) 301, 1370, 3374
HpaII CCGG 4 cut(s) 266, 836, 1652, 2241
HphI GGTGA 7 cut(s) 70, 112, 139, 1772, 2379, 2684, 3306
Hpy166II GTNNAC 7 cut(s) 159, 203, 905, 1649, 1745, 2018, 2945
Hpy8I GTNNAC 7 cut(s) 159, 203, 905, 1649, 1745, 2018, 2945
HpyAV CCTTC 7 cut(s) 646, 814, 1812, 1946, 2048, 3047, 3114
HpyCH4III ACNGT 3 cut(s) 326, 646, 2592
HpyCH4IV ACGT 1 cut(s) 2482
HpyF10VI GCNNNNNNNGC 6 cut(s) 101, 110, 1378, 1605, 2034, 2474
HpySE526I ACGT 1 cut(s) 2482
Hsp92I GRCGYC 1 cut(s) 1119
Kpn2I TCCGGA 2 cut(s) 265, 835
KpnI GGTACC 1 cut(s) 330
KspI CCGCGG 1 cut(s) 33
LguI GCTCTTC 1 cut(s) 102
LmnI GCTCC 4 cut(s) 2034, 2458, 2772, 3040
Lsp1109I GCAGC 7 cut(s) 26, 65, 68, 541, 1620, 2708, 2805
LweI GCATC 5 cut(s) 2318, 2382, 2858, 3184, 3205
MaeI CTAG 9 cut(s) 36, 1232, 1244, 1347, 1556, 2346, 2927, 3014, 3347
MaeII ACGT 1 cut(s) 2482
MaeIII GTNAC 8 cut(s) 125, 190, 470, 1577, 1706, 2385, 2521, 2690
MfeI CAATTG 1 cut(s) 3021
MflI RGATCY 5 cut(s) 1165, 1312, 1624, 2351, 2379
MhlI GDGCHC 3 cut(s) 205, 1239, 2947
MlyI GAGTC 5 cut(s) 225, 240, 1887, 2286, 2992
MmeI TCCRAC 6 cut(s) 1682, 2261, 2480, 2574, 2808, 3152
MroI TCCGGA 2 cut(s) 265, 835
MroXI GAANNNNTTC 2 cut(s) 965, 3061
MslI CAYNNNNRTG 3 cut(s) 916, 1758, 2877
MspA1I CMGCKG 3 cut(s) 32, 554, 1263
MspI CCGG 4 cut(s) 266, 836, 1652, 2241
MspR9I CCNGG 4 cut(s) 26, 2376, 2777, 3393
MunI CAATTG 1 cut(s) 3021
Mva1269I GAATGC 1 cut(s) 864
MvaI CCWGG 4 cut(s) 26, 2376, 2777, 3393
MvnI CGCG 1 cut(s) 32
MwoI GCNNNNNNNGC 6 cut(s) 101, 110, 1378, 1605, 2034, 2474
NcoI CCATGG 2 cut(s) 48, 2287
NheI GCTAGC 1 cut(s) 35
NlaIV GGNNCC 6 cut(s) 328, 421, 1656, 2036, 2774, 3036
NmuCI GTSAC 5 cut(s) 125, 190, 2385, 2521, 2690
NspI RCATGY 3 cut(s) 784, 2818, 2951
NspV TTCGAA 1 cut(s) 2282
PagI TCATGA 1 cut(s) 3244
PceI AGGCCT 1 cut(s) 1212
PciI ACATGT 2 cut(s) 780, 2947
PciSI GCTCTTC 1 cut(s) 102
PcsI WCGNNNNNNNCGW 1 cut(s) 211
PctI GAATGC 1 cut(s) 864
PdmI GAANNNNTTC 2 cut(s) 965, 3061
PfeI GAWTC 7 cut(s) 1780, 1864, 2161, 2177, 2990, 3124, 3311
PflMI CCANNNNNTGG 2 cut(s) 1693, 3044
PfoI TCCNGGA 1 cut(s) 3391
PinAI ACCGGT 1 cut(s) 1651
PkrI GCNGC 9 cut(s) 31, 34, 41, 55, 58, 556, 1610, 2723, 2820
PleI GAGTC 5 cut(s) 224, 240, 1887, 2286, 2992
PpsI GAGTC 5 cut(s) 224, 240, 1887, 2286, 2992
PpuMI RGGWCCY 1 cut(s) 420
PscI ACATGT 2 cut(s) 780, 2947
PshBI ATTAAT 1 cut(s) 588
Psp124BI GAGCTC 1 cut(s) 1239
Psp5II RGGWCCY 1 cut(s) 420
Psp6I CCWGG 4 cut(s) 24, 2374, 2775, 3391
PspGI CCWGG 4 cut(s) 24, 2374, 2775, 3391
PspN4I GGNNCC 6 cut(s) 328, 421, 1656, 2036, 2774, 3036
PspPI GGNCC 7 cut(s) 420, 755, 902, 1649, 1940, 2050, 2246
PspPPI RGGWCCY 1 cut(s) 420
PstI CTGCAG 2 cut(s) 2726, 2823
PstNI CAGNNNCTG 1 cut(s) 2465
PsuI RGATCY 5 cut(s) 1165, 1312, 1624, 2351, 2379
RsaI GTAC 4 cut(s) 328, 1048, 1360, 2886
RsaNI GTAC 4 cut(s) 327, 1047, 1359, 2885
RseI CAYNNNNRTG 3 cut(s) 916, 1758, 2877
SacI GAGCTC 1 cut(s) 1239
SacII CCGCGG 1 cut(s) 33
SapI GCTCTTC 1 cut(s) 102
SatI GCNGC 9 cut(s) 30, 33, 40, 54, 57, 555, 1609, 2722, 2819
Sau96I GGNCC 7 cut(s) 420, 755, 902, 1649, 1940, 2050, 2246
SchI GAGTC 5 cut(s) 225, 240, 1887, 2286, 2992
ScrFI CCNGG 4 cut(s) 26, 2376, 2777, 3393
SduI GDGCHC 3 cut(s) 205, 1239, 2947
SfaNI GCATC 5 cut(s) 2318, 2382, 2858, 3184, 3205
SfcI CTRYAG 2 cut(s) 2722, 2819
Sfr303I CCGCGG 1 cut(s) 33
SfuI TTCGAA 1 cut(s) 2282
SgrBI CCGCGG 1 cut(s) 33
SinI GGWCC 6 cut(s) 420, 902, 1649, 1940, 2050, 2246
SmiMI CAYNNNNRTG 3 cut(s) 916, 1758, 2877
SmlI CTYRAG 5 cut(s) 874, 1214, 1373, 1603, 2192
SmoI CTYRAG 5 cut(s) 874, 1214, 1373, 1603, 2192
SseBI AGGCCT 1 cut(s) 1212
SsiI CCGC 6 cut(s) 30, 32, 355, 552, 1263, 2244
SspI AATATT 2 cut(s) 139, 991
SspMI CTAG 9 cut(s) 36, 1232, 1244, 1347, 1556, 2346, 2927, 3014, 3347
SstI GAGCTC 1 cut(s) 1239
StuI AGGCCT 1 cut(s) 1212
StyD4I CCNGG 4 cut(s) 24, 2374, 2775, 3391
StyI CCWWGG 2 cut(s) 48, 2287
TaaI ACNGT 3 cut(s) 326, 646, 2592
TaiI ACGT 1 cut(s) 2485
TaqI TCGA 6 cut(s) 214, 507, 579, 2111, 2282, 3065
TaqII GACCGA 1 cut(s) 890
TauI GCSGC 2 cut(s) 32, 35
TfiI GAWTC 7 cut(s) 1780, 1864, 2161, 2177, 2990, 3124, 3311
TscAI CASTG 5 cut(s) 130, 487, 651, 976, 2731
TseFI GTSAC 5 cut(s) 125, 190, 2385, 2521, 2690
TseI GCWGC 7 cut(s) 39, 53, 56, 554, 1608, 2721, 2818
Tsp45I GTSAC 5 cut(s) 125, 190, 2385, 2521, 2690
TspGWI ACGGA 1 cut(s) 396
TspRI CASTG 5 cut(s) 130, 487, 651, 976, 2731
Van91I CCANNNNNTGG 2 cut(s) 1693, 3044
VneI GTGCAC 2 cut(s) 201, 2943
VpaK11BI GGWCC 6 cut(s) 420, 902, 1649, 1940, 2050, 2246
VspI ATTAAT 1 cut(s) 588
XceI RCATGY 3 cut(s) 784, 2818, 2951
XcmI CCANNNNNNNNNTGG 1 cut(s) 1884
XmiI GTMKAC 1 cut(s) 2017
XmnI GAANNNNTTC 2 cut(s) 965, 3061
XspI CTAG 9 cut(s) 36, 1232, 1244, 1347, 1556, 2346, 2927, 3014, 3347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.