RchiOBHm_Chr2g0113611

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
25741817 .. 25744928
3112 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48695

Sequence Viewer

Length: 2637 bp
ATGGGTGTCTTGAATATGTCATCTTTGACTACTGTAATTTTCTATGGAAACAACTTGAATGGTAGAATTCCTAACAATATATGTCAACATCTTCCAAATATTCAAGAGTTGAATTTGGGTATGAATCAGTTTGATGGTCCACTTCCATCCAAGTTATGGCAATGCAAACAACTACTTAGTTTGAAGTTGACAGTCAACATGTTTAGTGGAAGCATACCCAAAGATATTGGGAACTTAACTTCGATAAAGACGATTAGGCTTGGCACCAACAGCTTGACAGGTACTATACCATATGAGATTGGTTATCTTACAAACTTAGAAGAATTGGTGCTCCGTGATAATAATCTAAATGGCCATATCCCACCCTCAATCTTCAATATGTCCACAATAACAACCATAAATCTGGGCTACAATAAGCTTTCAGGTAGCCTGCCAGCAAACTTAGGCCATGGGCTTCCAAACCTACAAGTGTTTCCAGTAGGAACGAATCACCTCAGTGGAGTAATCCCCAAATCCATCTCCAATGCTTCTGAGCTTTGGATTCTAGACCTGGGCCGTAACTCTTTTTCTGGATTTATTCCAAGCACTATGTGCCTCTTGACAAACCTTGAATGGGTTAGCTTCTTCAACAATAATTTGACCATTGATATCTCTAGTCTAGAAGTTAATATTTTGTCTTGTCTGGCAAATCTTAGAAATTTAAAGACTTTGTCCTTAGAAAGCAATCCATTTGATGCCAAGCTTTCAATTTCCTTCAGCAATTTCTCTGCATCACTTCAAAATATTTATTTAGGAAATTGCAGCTTCAGAGGTAACATCCCCAGTGATGTAGGTAACTTGAGTAGATTGATACTTTTAGCCCTCGAAGACAATCAATTGAGCGGACCAATCCCAAGCTCAGTGGGAAGATTACTGAATCTTCAAGGTTTGTATATGTATAATAACACATTGCAAGGATACATTCCAGATGAACTTTGTCAACTAGGAAACTTAGTTGATTTGTATTTGGATGGGAATCAACTCTCTGGTTCTGTACCTTCCTGCTTGGGTAATCTATCAGCATCTCTACGAAGTCTATTCTTGGGGTCCAATTTGTTGAATTCTACACTCCCGTCTTCCTTGTGGGGACTTGCATATATCTTGAAAATAAACTTGTCATCCAATTCTCTAATTGGACCTCTATCAGGTGGTGTTGGTAAATTGAAAGTTGCCAGATACATTAATGAATCATACAACCAATTATCTGGTAGTATACCAGGTAGTGTTGGGAGTTTATCGAATTTGGTCAATCTCTCCTTAGCACATAATAATCTAGAAGGCCCTATTCCTAGTTCCTTTGAAACCTGTGTAAGCTTAGAAAGATTGGATTTATCTCAGAACAGTCTCTCTGGAGTGATTCCAAAATCTCTAGAAGCGCTCTCATATCTCAAATATCTAAATTTGTCTTTCAACATACTCCAAGGAGAAATTCCAACAGGCGGTGCTTTCAAAAACTTCTCTGCTGAGTCATTTGTTTCAAACCATGAACTCTGTGGTGCATCCCAATTTCAAGTTCCACCATGCAAAAGAAAAACTAGCATATCTATCTTGAAGTATGTTGTTCCGGGGATCTTATCAGCAATGCTTCTAGCGGCCTCCATATTTTGGATGTCGATGTTACGCAGGAAAAAGAATGTGAAAACTACAGCACATACTATCTTGACACCTCAAGTTTTCTGGAGAAGAGTTTCATACCTAGAGCTCCTAAGTGCGACAAATGGATTCAATGAAAGCAACTTACTTGGTACTGGGGGTTTTGGCTCAGTATATAAAGGAACATTGTCAGATGGGATAGATGTTGCGATAAAGGTTTTCAATTTGGAGTTGGAAGGCGCATTTTCAAGTTTTGAGGTTGAATGTGAACTGCTAAGTAATGTTCGTCACCGAAATCTTGTTAAAGTCATCAGTTGTTGCAGTCAAATTGATTTCAAAGGTCTTGTATTGAATTACATGCCTAATGGGAGTCTTGAGAAGTGGTTGTATTCTCAGAATTTTTCTTTGAACATCATGCAGAGGTTGGATATAATGATAGATGTTGCATCTGCATTGGAGTACCTTCATCATGGTTATGAAGTACCTGTTGTCCATTGTGATTTGAAGCCAAGCAACATCCTACTAGATGATGATATGGTTGCACATGTTGCTGATTTCGGTATTGCGAAACTCTTGGGTGGAGGAGATTCTATGACTCAAACCATAACCTTAGCCACAATTGGGTATATGGCTCCAGAGTATGGAATGCAAGGAATAGTGACCAGAAGAGGGGATGTGTATAGTTTTGGTATTGTAGTGATGGAAACATTCTCAAGAAGGAAGCCAACTGATGAGATCTTCGTTGGGGAAATGAGACTAAAACAATGGGTTGCAAATTTCCTAGTTGCAGATGCGATAGTTGAAGTTGTGGATGCTACCTTACTTGGAACCGAGGAGGATCATGACTTCGTGTGCAAGAGGGAGTGCTTATCATCTATTATGAGATTAGCTGTTGCTTGTTCAGCAGAATCACCGGAAGAAAGGATAAACATGCAAGAGGCTGTAGCCATGCTTAAAGCAATCAAGATCAAGTTTTCAGAGGACTCTGCTCAACAGGTGTGGTGA

Protein Analysis

878

Amino Acids

96.02

Weight (kDa)

5.8

Isoelectric Point (pI)

35.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 104 - 165 8.4e-06 Leucine rich repeat
LRR_14 PF23598 252 - 359 3.2e-06 Leucine-rich repeat region
LRR_8 PF13855 283 - 341 7.5e-06 Leucine rich repeat
LRR_8 PF13855 426 - 484 1.2e-09 Leucine rich repeat
Pkinase PF00069 589 - 860 1.2e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 592 - 861 1.7e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 263
AccB7I CCANNNNNTGG 3 cut(s) 156, 1644, 2273
AccBSI CCGCTC 1 cut(s) 882
AccI GTMKAC 1 cut(s) 1252
AciI CCGC 3 cut(s) 882, 1479, 1631
AclWI GGATC 2 cut(s) 1616, 2478
AcoI YGGCCR 1 cut(s) 352
AcsI RAATTY 9 cut(s) 66, 112, 697, 1099, 1279, 1438, 1467, 2029, 2407
AcuI CTGAAG 2 cut(s) 739, 790
AdeI CACNNNGTG 1 cut(s) 591
AfaI GTAC 5 cut(s) 283, 1035, 1786, 2093, 2115
AfeI AGCGCT 1 cut(s) 1416
AfiI CCNNNNNNNGG 8 cut(s) 156, 613, 1184, 1478, 1644, 2253, 2273, 2301
AflIII ACRYGT 2 cut(s) 198, 2176
AjnI CCWGG 2 cut(s) 549, 1255
AjuI GAANNNNNNNTTGG 4 cut(s) 1452, 1484, 1536, 1568
AleI CACNNNNGTG 1 cut(s) 495
Alw21I GWGCWC 2 cut(s) 333, 1743
Alw26I GTCTC 2 cut(s) 1388, 2380
AlwI GGATC 2 cut(s) 1616, 2478
Aor51HI AGCGCT 1 cut(s) 1416
AoxI GGCC 5 cut(s) 352, 445, 553, 1318, 1632
ApeKI GCWGC 1 cut(s) 801
ApoI RAATTY 9 cut(s) 66, 112, 697, 1099, 1279, 1438, 1467, 2029, 2407
AseI ATTAAT 1 cut(s) 1221
Asp700I GAANNNNTTC 1 cut(s) 1726
AspLEI GCGC 2 cut(s) 1417, 1874
AspS9I GGNCC 6 cut(s) 137, 553, 884, 1086, 1175, 1319
AsuC2I CCSGG 1 cut(s) 1605
AsuHPI GGTGA 3 cut(s) 482, 1913, 2535
AvaII GGWCC 4 cut(s) 137, 884, 1086, 1175
BalI TGGCCA 1 cut(s) 354
BanI GGYRCC 1 cut(s) 263
BanII GRGCYC 1 cut(s) 1743
BbsI GAAGAC 2 cut(s) 873, 1107
Bbv12I GWGCWC 2 cut(s) 333, 1743
BbvI GCAGC 1 cut(s) 813
BccI CCATC 6 cut(s) 128, 154, 524, 1004, 1820, 2326
BceAI ACGGC 1 cut(s) 540
BciT130I CCWGG 2 cut(s) 551, 1257
BciVI GTATCC 1 cut(s) 950
BcnI CCSGG 1 cut(s) 1605
BcoDI GTCTC 2 cut(s) 1388, 2380
BfmI CTRYAG 2 cut(s) 1683, 2574
BfoI RGCGCY 1 cut(s) 1418
BfuI GTATCC 1 cut(s) 950
BglII AGATCT 1 cut(s) 2367
BisI GCNGC 2 cut(s) 802, 1632
BlsI GCNGC 2 cut(s) 803, 1633
Bme1390I CCNGG 3 cut(s) 551, 1257, 1605
Bme18I GGWCC 4 cut(s) 137, 884, 1086, 1175
BmgT120I GGNCC 6 cut(s) 137, 553, 884, 1086, 1175, 1319
BmiI GGNNCC 4 cut(s) 265, 1087, 2265, 2461
BmrFI CCNGG 3 cut(s) 551, 1257, 1605
BmrI ACTGGG 2 cut(s) 816, 1797
BmsI GCATC 7 cut(s) 724, 779, 1070, 1547, 2087, 2413, 2434
BmuI ACTGGG 2 cut(s) 816, 1797
BpiI GAAGAC 2 cut(s) 873, 1107
BpmI CTGGAG 3 cut(s) 1410, 1738, 2250
Bpu10I CCTNAGC 2 cut(s) 1297, 2242
BpuEI CTTGAG 4 cut(s) 859, 1692, 2027, 2329
BpuMI CCSGG 1 cut(s) 1605
BsaBI GATNNNNATC 2 cut(s) 342, 1014
BsaJI CCNNGG 5 cut(s) 448, 550, 1459, 1604, 2463
BsaWI WCCGGW 1 cut(s) 2545
Bsc4I CCNNNNNNNGG 8 cut(s) 156, 613, 1184, 1478, 1644, 2253, 2273, 2301
Bse1I ACTGG 3 cut(s) 476, 822, 1792
Bse3DI GCAATG 3 cut(s) 167, 947, 1626
Bse8I GATNNNNATC 2 cut(s) 342, 1014
BseBI CCWGG 2 cut(s) 551, 1257
BseDI CCNNGG 5 cut(s) 448, 550, 1459, 1604, 2463
BseGI GGATG 9 cut(s) 146, 816, 1015, 1157, 1538, 1653, 2148, 2311, 2449
BseJI GATNNNNATC 2 cut(s) 342, 1014
BseLI CCNNNNNNNGG 8 cut(s) 156, 613, 1184, 1478, 1644, 2253, 2273, 2301
BseMI GCAATG 3 cut(s) 167, 947, 1626
BseMII CTCAG 7 cut(s) 508, 522, 912, 1388, 1494, 1815, 2039
BseNI ACTGG 3 cut(s) 476, 822, 1792
BseRI GAGGAG 2 cut(s) 2229, 2480
BseXI GCAGC 1 cut(s) 813
BshFI GGCC 5 cut(s) 354, 447, 555, 1320, 1634
BshNI GGYRCC 1 cut(s) 263
BsiHKAI GWGCWC 2 cut(s) 333, 1743
BsiSI CCGG 2 cut(s) 1604, 2546
BslFI GGGAC 1 cut(s) 1140
BslI CCNNNNNNNGG 8 cut(s) 156, 613, 1184, 1478, 1644, 2253, 2273, 2301
BsmAI GTCTC 2 cut(s) 1388, 2380
BsmFI GGGAC 1 cut(s) 1140
BsmI GAATGC 1 cut(s) 2283
BsnI GGCC 5 cut(s) 354, 447, 555, 1320, 1634
Bsp1286I GDGCHC 2 cut(s) 333, 1743
Bsp143I GATC 4 cut(s) 1608, 2367, 2470, 2598
Bsp19I CCATGG 1 cut(s) 448
BspACI CCGC 3 cut(s) 882, 1479, 1631
BspANI GGCC 5 cut(s) 354, 447, 555, 1320, 1634
BspCNI CTCAG 7 cut(s) 507, 523, 911, 1387, 1495, 1814, 2038
BspHI TCATGA 1 cut(s) 2473
BspLI GGNNCC 4 cut(s) 265, 1087, 2265, 2461
BspPI GGATC 2 cut(s) 1616, 2478
BspT107I GGYRCC 1 cut(s) 263
BsrBI CCGCTC 1 cut(s) 882
BsrDI GCAATG 3 cut(s) 167, 947, 1626
BsrI ACTGG 3 cut(s) 476, 822, 1792
BssECI CCNNGG 5 cut(s) 448, 550, 1459, 1604, 2463
BssMI GATC 4 cut(s) 1608, 2367, 2470, 2598
BssNAI GTATAC 1 cut(s) 1253
BssT1I CCWWGG 2 cut(s) 448, 1459
Bst1107I GTATAC 1 cut(s) 1253
Bst2UI CCWGG 2 cut(s) 551, 1257
Bst4CI ACNGT 3 cut(s) 34, 193, 1382
Bst6I CTCTTC 2 cut(s) 1717, 2293
BstAPI GCANNNNNTGC 2 cut(s) 591, 2180
BstC8I GCNNGC 2 cut(s) 431, 435
BstDSI CCRYGG 1 cut(s) 448
BstENI CCTNNNNNAGG 1 cut(s) 1182
BstF5I GGATG 9 cut(s) 146, 816, 1015, 1157, 1538, 1653, 2148, 2311, 2449
BstH2I RGCGCY 1 cut(s) 1418
BstHHI GCGC 2 cut(s) 1417, 1874
BstKTI GATC 4 cut(s) 1611, 2370, 2473, 2601
BstMAI GTCTC 2 cut(s) 1388, 2380
BstMBI GATC 4 cut(s) 1608, 2367, 2470, 2598
BstMWI GCNNNNNNNGC 4 cut(s) 270, 591, 2180, 2534
BstNI CCWGG 2 cut(s) 551, 1257
BstNSI RCATGY 4 cut(s) 202, 1993, 2180, 2566
BstSCI CCNGG 3 cut(s) 549, 1255, 1603
BstSFI CTRYAG 2 cut(s) 1683, 2574
BstV1I GCAGC 1 cut(s) 813
BstV2I GAAGAC 2 cut(s) 873, 1107
BstX2I RGATCY 2 cut(s) 1608, 2367
BstXI CCANNNNNNTGG 2 cut(s) 403, 1244
BstYI RGATCY 2 cut(s) 1608, 2367
BstZ17I GTATAC 1 cut(s) 1253
BsuI GTATCC 1 cut(s) 950
BsuRI GGCC 5 cut(s) 354, 447, 555, 1320, 1634
BtgI CCRYGG 1 cut(s) 448
BtsCI GGATG 9 cut(s) 146, 816, 1015, 1157, 1538, 1653, 2148, 2311, 2449
BtsIMutI CAGTG 3 cut(s) 502, 829, 906
Cac8I GCNNGC 2 cut(s) 431, 435
CciI TCATGA 1 cut(s) 2473
CfoI GCGC 2 cut(s) 1417, 1874
Cfr13I GGNCC 6 cut(s) 137, 553, 884, 1086, 1175, 1319
CsiI ACCWGGT 1 cut(s) 1255
Csp6I GTAC 5 cut(s) 282, 1034, 1785, 2092, 2114
CspCI CAANNNNNGTGG 3 cut(s) 882, 917, 2612
CviQI GTAC 5 cut(s) 282, 1034, 1785, 2092, 2114
DpnI GATC 4 cut(s) 1610, 2369, 2472, 2600
DpnII GATC 4 cut(s) 1608, 2367, 2470, 2598
DraI TTTAAA 1 cut(s) 702
DraIII CACNNNGTG 1 cut(s) 591
EaeI YGGCCR 1 cut(s) 352
Eam1104I CTCTTC 2 cut(s) 1717, 2293
EarI CTCTTC 2 cut(s) 1717, 2293
Ecl136II GAGCTC 1 cut(s) 1741
Eco130I CCWWGG 2 cut(s) 448, 1459
Eco24I GRGCYC 1 cut(s) 1743
Eco32I GATATC 1 cut(s) 649
Eco47I GGWCC 4 cut(s) 137, 884, 1086, 1175
Eco47III AGCGCT 1 cut(s) 1416
Eco53kI GAGCTC 1 cut(s) 1741
Eco57I CTGAAG 2 cut(s) 739, 790
EcoICRI GAGCTC 1 cut(s) 1741
EcoNI CCTNNNNNAGG 1 cut(s) 1182
EcoO109I RGGNCCY 1 cut(s) 1319
EcoRI GAATTC 2 cut(s) 66, 1099
EcoRII CCWGG 2 cut(s) 549, 1255
EcoRV GATATC 1 cut(s) 649
EcoT14I CCWWGG 2 cut(s) 448, 1459
EcoT38I GRGCYC 1 cut(s) 1743
ErhI CCWWGG 2 cut(s) 448, 1459
FaqI GGGAC 1 cut(s) 1140
FauNDI CATATG 1 cut(s) 292
FblI GTMKAC 1 cut(s) 1252
Fnu4HI GCNGC 2 cut(s) 802, 1632
FokI GGATG 9 cut(s) 133, 803, 1022, 1144, 1525, 1660, 2135, 2318, 2456
FriOI GRGCYC 1 cut(s) 1743
Fsp4HI GCNGC 2 cut(s) 802, 1632
GlaI GCGC 2 cut(s) 1416, 1873
GluI GCNGC 2 cut(s) 802, 1632
GsuI CTGGAG 3 cut(s) 1410, 1738, 2250
HaeII RGCGCY 1 cut(s) 1418
HaeIII GGCC 5 cut(s) 354, 447, 555, 1320, 1634
HapII CCGG 2 cut(s) 1604, 2546
HhaI GCGC 2 cut(s) 1417, 1874
Hin6I GCGC 2 cut(s) 1415, 1872
HinP1I GCGC 2 cut(s) 1415, 1872
HincII GTYRAC 4 cut(s) 86, 189, 196, 980
HindII GTYRAC 4 cut(s) 86, 189, 196, 980
HindIII AAGCTT 3 cut(s) 416, 740, 1351
HpaII CCGG 2 cut(s) 1604, 2546
HphI GGTGA 3 cut(s) 482, 1913, 2535
Hpy166II GTNNAC 8 cut(s) 86, 140, 189, 196, 384, 980, 1253, 1901
Hpy188I TCNGA 6 cut(s) 532, 809, 1377, 1825, 2028, 2611
Hpy8I GTNNAC 8 cut(s) 86, 140, 189, 196, 384, 980, 1253, 1901
HpyAV CCTTC 6 cut(s) 763, 1047, 1310, 1862, 2105, 2343
HpyCH4III ACNGT 3 cut(s) 34, 193, 1382
HpyF10VI GCNNNNNNNGC 4 cut(s) 270, 591, 2180, 2534
HspAI GCGC 2 cut(s) 1415, 1872
Kzo9I GATC 4 cut(s) 1608, 2367, 2470, 2598
LmnI GCTCC 3 cut(s) 336, 1746, 2269
Lsp1109I GCAGC 1 cut(s) 813
LweI GCATC 7 cut(s) 724, 779, 1070, 1547, 2087, 2413, 2434
MabI ACCWGGT 1 cut(s) 1255
MaeIII GTNAC 6 cut(s) 557, 812, 833, 1656, 1919, 2290
MalI GATC 4 cut(s) 1610, 2369, 2472, 2600
MbiI CCGCTC 1 cut(s) 882
MboI GATC 4 cut(s) 1608, 2367, 2470, 2598
MfeI CAATTG 2 cut(s) 875, 2250
MflI RGATCY 2 cut(s) 1608, 2367
MhlI GDGCHC 2 cut(s) 333, 1743
MlsI TGGCCA 1 cut(s) 354
MluNI TGGCCA 1 cut(s) 354
MlyI GAGTC 4 cut(s) 1514, 2011, 2221, 2609
MmeI TCCRAC 3 cut(s) 1496, 1845, 2037
Mox20I TGGCCA 1 cut(s) 354
MroXI GAANNNNTTC 1 cut(s) 1726
MscI TGGCCA 1 cut(s) 354
MseI TTAA 6 cut(s) 236, 666, 701, 1221, 1935, 2586
MslI CAYNNNNRTG 2 cut(s) 495, 2106
Msp20I TGGCCA 1 cut(s) 354
MspI CCGG 2 cut(s) 1604, 2546
MspR9I CCNGG 3 cut(s) 551, 1257, 1605
MunI CAATTG 2 cut(s) 875, 2250
Mva1269I GAATGC 1 cut(s) 2283
MvaI CCWGG 2 cut(s) 551, 1257
MwoI GCNNNNNNNGC 4 cut(s) 270, 591, 2180, 2534
NciI CCSGG 1 cut(s) 1605
NcoI CCATGG 1 cut(s) 448
NdeI CATATG 1 cut(s) 292
NdeII GATC 4 cut(s) 1608, 2367, 2470, 2598
NlaIV GGNNCC 4 cut(s) 265, 1087, 2265, 2461
NmuCI GTSAC 2 cut(s) 1919, 2290
NspI RCATGY 4 cut(s) 202, 1993, 2180, 2566
OliI CACNNNNGTG 1 cut(s) 495
PagI TCATGA 1 cut(s) 2473
PciI ACATGT 2 cut(s) 198, 2176
PcsI WCGNNNNNNNCGW 1 cut(s) 248
PctI GAATGC 1 cut(s) 2283
PdmI GAANNNNTTC 1 cut(s) 1726
PflFI GACNNNGTC 1 cut(s) 709
PflMI CCANNNNNTGG 3 cut(s) 156, 1644, 2273
PkrI GCNGC 2 cut(s) 803, 1633
PleI GAGTC 4 cut(s) 1513, 2010, 2221, 2609
PpsI GAGTC 4 cut(s) 1513, 2010, 2221, 2609
PscI ACATGT 2 cut(s) 198, 2176
PshBI ATTAAT 1 cut(s) 1221
Psp124BI GAGCTC 1 cut(s) 1743
Psp6I CCWGG 2 cut(s) 549, 1255
PspGI CCWGG 2 cut(s) 549, 1255
PspN4I GGNNCC 4 cut(s) 265, 1087, 2265, 2461
PspPI GGNCC 6 cut(s) 137, 553, 884, 1086, 1175, 1319
PsuI RGATCY 2 cut(s) 1608, 2367
PsyI GACNNNGTC 1 cut(s) 709
RsaI GTAC 5 cut(s) 283, 1035, 1786, 2093, 2115
RsaNI GTAC 5 cut(s) 282, 1034, 1785, 2092, 2114
RseI CAYNNNNRTG 2 cut(s) 495, 2106
SacI GAGCTC 1 cut(s) 1743
SaqAI TTAA 6 cut(s) 236, 666, 701, 1221, 1935, 2586
SatI GCNGC 2 cut(s) 802, 1632
Sau3AI GATC 4 cut(s) 1608, 2367, 2470, 2598
Sau96I GGNCC 6 cut(s) 137, 553, 884, 1086, 1175, 1319
SchI GAGTC 4 cut(s) 1514, 2011, 2221, 2609
ScrFI CCNGG 3 cut(s) 551, 1257, 1605
SduI GDGCHC 2 cut(s) 333, 1743
SexAI ACCWGGT 1 cut(s) 1255
SfaNI GCATC 7 cut(s) 724, 779, 1070, 1547, 2087, 2413, 2434
SfcI CTRYAG 2 cut(s) 1683, 2574
SinI GGWCC 4 cut(s) 137, 884, 1086, 1175
SmiMI CAYNNNNRTG 2 cut(s) 495, 2106
SmlI CTYRAG 4 cut(s) 838, 1707, 2006, 2344
SmoI CTYRAG 4 cut(s) 838, 1707, 2006, 2344
SsiI CCGC 3 cut(s) 882, 1479, 1631
SspI AATATT 3 cut(s) 100, 670, 784
SstI GAGCTC 1 cut(s) 1743
StyD4I CCNGG 3 cut(s) 549, 1255, 1603
StyI CCWWGG 2 cut(s) 448, 1459
TaaI ACNGT 3 cut(s) 34, 193, 1382
TaqI TCGA 4 cut(s) 242, 864, 1277, 1652
TauI GCSGC 1 cut(s) 1634
Tru1I TTAA 6 cut(s) 236, 666, 701, 1221, 1935, 2586
Tru9I TTAA 6 cut(s) 236, 666, 701, 1221, 1935, 2586
TscAI CASTG 3 cut(s) 502, 829, 906
TseFI GTSAC 2 cut(s) 1919, 2290
TseI GCWGC 1 cut(s) 801
Tsp45I GTSAC 2 cut(s) 1919, 2290
TspDTI ATGAA 8 cut(s) 137, 984, 1239, 1539, 1719, 1782, 2087, 2124
TspGWI ACGGA 1 cut(s) 323
TspRI CASTG 3 cut(s) 502, 829, 906
Tth111I GACNNNGTC 1 cut(s) 709
Van91I CCANNNNNTGG 3 cut(s) 156, 1644, 2273
VpaK11BI GGWCC 4 cut(s) 137, 884, 1086, 1175
VspI ATTAAT 1 cut(s) 1221
XagI CCTNNNNNAGG 1 cut(s) 1182
XapI RAATTY 9 cut(s) 66, 112, 697, 1099, 1279, 1438, 1467, 2029, 2407
XbaI TCTAGA 4 cut(s) 544, 658, 1312, 1408
XceI RCATGY 4 cut(s) 202, 1993, 2180, 2566
XcmI CCANNNNNNNNNTGG 2 cut(s) 153, 1529
XmiI GTMKAC 1 cut(s) 1252
XmnI GAANNNNTTC 1 cut(s) 1726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.