Prupe.4G064400_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000058
Physical Location & Seq
Reverse (-)
3094953 .. 3099851
4899 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G064400.1

Sequence Viewer

Length: 3372 bp
ATGGAGAGAACCTATTTCCTCTTGTTGATAACCTTGTTTCTGGTACATTACTGTTCTATGGCTACCTTAACTGTGGCAGCACAGACCAATTTCACCACAGACCAGTCTGCTCTTCTTGCTTTCAAAGCCCATATCACCAATGACCCTCAAAACATTTTGGCCAACTGGTCTACTACTACCTCCATTTGCAACTGGGTTGGTGTTACTTGTGGTGCTCACCACCTTAGAGTTACAGCCTTAAATCTATCTTACATGGGTCTCACAGGCACCATTCCTCCATACCTAGGCAATCTATCCTTTCTTGTTGAGCTGAGCTTTAAAAATAACAGTTTCCATGGTTCCTTACCACTGGAATTGTCTCATTTGCGTCGATTGAAGTTGATTAGCTGCGCATACAACAACTTCGCCGTGGAAGAGATTCCCTCCTGGTTTGGGTCCTTCCCCAAACTTCAATTCATTGATTTGAGCGGTAATCAGTTTTCAGGGTCAATACCCACTGCTATCTTCAACTTGTCTACCCTGCAAGCAATTGATCTGAGAAAGAACCAGCTATCAGGTAGCATACCAGGAGAAATAGGGAACTTAACAATGCTGAAGAGCATAAACCTTGACTTTAACAATTTCAAAGAAATTCCAAATGAGATCGGAAGCATAGAGCTGCAGAAGTTTTCTATGCAATTCAATGCCCTAAAAGGGCCTGTTCCTCTGGATGTCTTTAACATGTCTTCTTTAACTTATTTGGGTCTATCGGGAAACAGCTTGAATGGTACTATTCCGGACAATATATGTCAACGTCTTCCAAATATGCAGTTTTTGCTGCTGTCCTACAACCAGTTTGATGGTCCACTTCCATCCAAATCATGGCAATATTGCAAAGAGCTGCATGTATTGTCATTGTCGTATAACAATTTCAGTGGAAGCATACCCAAAACTTTTGGGAACTTGACCCAGTTAAAGATGATTTTTCTTGGCATAAACTATTTGACAGGTACTATACCAGATGAGATTGGTGCTCTTCAAAAATTAGAGTATTTGTCGTTTGCAGATAATAATCTTGATGGCCCTATCCCATCCCCAATCTTCAATATGTCCACAATAAGCACAATTTCGCTGGCTGGAAATTGGCTCTCAGGTAGACTTCCAGAAAACATAGGCCTTGGGGTTCCAAATCTACAGGAACTTTACGTATCATGGAATAAACTCAGTGGAGTAATCCCCAATTTTACCTGCAATGGTTCTAAGCTCACGAAGCTAGACATGGCTGTTAACTCATTTACTGGTGTTATTCCTACCACACTTTGTGCCTTAACAAACCTTGTGTGGCTTAACTTACAGCTTAATAATTTGACGATTGATACTTCTACTCCTGAAGTAAACTTTTTTTCTTGTTTGTCCAATCTTAGAAATTTGTGGAGATTACACTTGCCAAGTAATCCATTAAATGCCATGCTTCCTGCTTCCCTTGGGAATCTGTCTACATCACTTCAATATCTTGATTTAAGCCTGTGCAACATGATGGGTAACATTCCCGGTGGTATTGGAAACTTGAGCAACTTGACAGTGCTGAACTTGGGATACAATCAACTGGGTGGATCAATTCCAACTACATTGGGAAGGCTACGGAATCTCCAAGGTTTGTATTTGAATGATAACAAATTGCAAGGATGCATCCCAAATCAACTTTGTCAACTAGAGAACCTAGGTGACTTAGTTTTGGGTCGTAATCAACTCTCTGGTTCTGTACCTTCCTGTTTGGACAATATAGCAGCAGCTCTAAGAAGTCTATCAATAGACTCCAATTTGTTAAATTCCACTATACCATCTAGCTTTTGGAGACTTGCCTATATCTTGCACATAAACTTATCATCCAATTCTCTGATTGGAACTCTCTCGGAAGATATTGGAAAGTTGAAAGTTGTGATAGATATAGATTTATCATGTAACCATTTATCAGGTAATATACCAAGTAGCATTGGGGGTCTTCAGAATTTGATGAATGTTTCGTTGGCAAATAATAATTTAGAAGGCTCTATTCCGAGTTCGTGCGGCAATTTGCTGAGCCTGGAACTCTTCGATTTATCCGAAAACAAGCTGTCTGGAGAGATTCCGAAGTCCTTACAAGCACTTGTACACCTCAAGTATCTGAATTTGTCTTTCAACAGACTCGAAGGAGAAATTCCAACAGGTGGACCTTTCCAAAACTTCTCTGCTCAGTCATTTGTCTCAAATGGTGCACTCTGTGGTGCACCCCGACTCCATCTCCCACTGTGCAAAATTAGTGCAGAATCACGTTCAAGGAAAGCTAGTACATCCAACTTGAAATATCTTATTCCAGGGATCATATCAGCAACACTCCTAGTGGCCACTTTATCAATGTTGATACTACGCAAGAAAAGAAATTTGGATGTTGGAACAGAGTCTACCTTGCTAGCTCAACCATTTTGGAGAAAGCTTTCCTACTTGGAAGTTTTTAGGGCGACAAATGGGTTCAATGACAGCAACTTACTTGGTGTTGGAGGTTTTGGCTCTGTATATAAAGGAACACTTTCAGACGGGATAGATGTCGCTGTAAAGGTTTTCAATTTACAGCTAGAAGGCGCTTTCAAGAGTTTTGATAGTGAATGTGAAATGCTAAGCAATATTCGTCATCGAAATCTTATCAAGATCATCAGTTGTTGCAGTCAGAATGATTTCAAAGCCTTAGTACTGCAATACATGCCTAATGGGAGCCTCGAGAAGTGGTTGTATTCTCAAAACTCTTCTTTGAATATCTTACAAAGGATGAATATATTGGCAGATGTTGCACTAGCATTGGAATACCTACACCATGGTTATTCAGTACCTATCGTCCATTGTGATATGAAGCCCAGCAATATACTACTAGATGATGATATGGTTACACATGTTGCTGATTTTGGAATTGCAAAATTCTTGGGTGGAGGAGATTCGATGACCCAAACCATGACACTAGCCACAATTGGGTATATGGCTCCAGAGTATGGAATGGAAGGAATAGTTTCAACAAGAGGGGATGTGTACAGTTTTGGTATTCTAGTGATGGAAACATTCACAAGAAGGAAGCCAACAGATGAGATGTTTGTTGGTGAAATGAATTTAAAGCAATGGATTGCAAACTCACTATTGTTACCCGATGCAAAGATGGATGAAGTTGTGGATGCCAATTTGCTTGGGATTGGGACAGAGCAGGAAGATGATGATCATGTGCGGAAGAGGGATTGCATATCATCCATTATGCGATTAGCCCTTGCTTGCTGTGCAGAATCACCAGAAGAGAGGATAAGTATGAAAGAAGCTGTAGCCACACTCAATAAAATCAAGAACAAGTTTTTGAAGGACGCTAGAGATAAGTAG

Protein Analysis

1124

Amino Acids

123.24

Weight (kDa)

6.1

Isoelectric Point (pI)

35.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000058)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g13810 FvH4_3g07490 FvH4_3g07510 FvH4_3g07541 FvH4_3g10100 FvH4_3g14951 FvH4_3g22681 FvH4_3g37722 FvH4_5g08260 FvH4_5g08280 FvH4_7g09050 FvH4_7g09050
malus_domestica MD00G1192900.v1.1 MD00G1214300.v1.1 MD02G1291600.v1.1 MD02G1291800.v1.1 MD03G1138500.v1.1 MD03G1180000.v1.1 MD03G1180600.v1.1 MD03G1180700.v1.1 MD03G1180800.v1.1 MD03G1180900.v1.1 MD03G1182000.v1.1 MD03G1182800.v1.1 MD03G1280900.v1.1 MD05G1297700.v1.1 MD05G1298100.v1.1 MD05G1298400.v1.1 MD07G1034700.v1.1 MD07G1034900.v1.1 MD07G1035000.v1.1 MD07G1035900.v1.1 MD07G1168700.v1.1 MD07G1235700.v1.1 MD07G1235900.v1.1 MD07G1236200.v1.1 MD07G1236500.v1.1 MD07G1236800.v1.1 MD10G1212700.v1.1 MD10G1277400.v1.1 MD10G1277600.v1.1 MD11G1180300.v1.1 MD13G1193600.v1.1
prunus_persica Prupe.1G074000_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G044400_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.2G048900_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G057800_v2.0.a1 Prupe.4G063200_v2.0.a1 Prupe.4G063300_v2.0.a1 Prupe.4G063400_v2.0.a1 Prupe.4G063600_v2.0.a1 Prupe.4G064200_v2.0.a1 Prupe.4G064400_v2.0.a1 Prupe.4G064500_v2.0.a1 Prupe.4G064600_v2.0.a1 Prupe.4G076800_v2.0.a1 Prupe.6G160800_v2.0.a1 Prupe.6G160900_v2.0.a1 Prupe.6G294300_v2.0.a1 Prupe.7G141600_v2.0.a1
pyrus_communis pycom03g06490 pycom03g13610 pycom03g13640 pycom03g13660 pycom05g27580 pycom05g27600 pycom05g27620 pycom07g02450 pycom10g23160
rosa_chinensis RchiOBHm_Chr1g0336221 RchiOBHm_Chr2g0113611 RchiOBHm_Chr2g0113631 RchiOBHm_Chr2g0113661 RchiOBHm_Chr2g0113761 RchiOBHm_Chr2g0113861 RchiOBHm_Chr2g0113951 RchiOBHm_Chr2g0114021 RchiOBHm_Chr2g0114121 RchiOBHm_Chr2g0114161 RchiOBHm_Chr2g0114221 RchiOBHm_Chr2g0114281 RchiOBHm_Chr2g0114381 RchiOBHm_Chr2g0115761 RchiOBHm_Chr4g0387401 RchiOBHm_Chr4g0402601 RchiOBHm_Chr4g0403091 RchiOBHm_Chr4g0403141 RchiOBHm_Chr4g0403171 RchiOBHm_Chr4g0403191 RchiOBHm_Chr4g0403231 RchiOBHm_Chr4g0403281 RchiOBHm_Chr4g0403311 RchiOBHm_Chr4g0404191 RchiOBHm_Chr4g0404211 RchiOBHm_Chr4g0404231 RchiOBHm_Chr4g0404261 RchiOBHm_Chr4g0404341 RchiOBHm_Chr4g0404451 RchiOBHm_Chr4g0404511 RchiOBHm_Chr4g0404521 RchiOBHm_Chr4g0404541 RchiOBHm_Chr5g0011141 RchiOBHm_Chr5g0011171 RchiOBHm_Chr5g0011191 RchiOBHm_Chr5g0011261 RchiOBHm_Chr5g0011271 RchiOBHm_Chr5g0011291 RchiOBHm_Chr5g0011331 RchiOBHm_Chr5g0011691 RchiOBHm_Chr5g0014361 RchiOBHm_Chr5g0016021 RchiOBHm_Chr5g0040131 RchiOBHm_Chr5g0040431 RchiOBHm_Chr5g0040461 RchiOBHm_Chr5g0040481 RchiOBHm_Chr5g0042071 RchiOBHm_Chr5g0042121 RchiOBHm_Chr5g0059161 RchiOBHm_Chr6g0251871 RchiOBHm_Chr6g0277701 RchiOBHm_Chr6g0277761 RchiOBHm_Chr7g0213281
rosa_laevigata RLG00000001438 RLG00000002815 RLG00000008984 RLG00000008985 RLG00000008988 RLG00000008989 RLG00000008991 RLG00000008997 RLG00000008998 RLG00000009000 RLG00000009002 RLG00000009021 RLG00000009024 RLG00000009025 RLG00000009026 RLG00000013277 RLG00000013282 RLG00000017615 RLG00000018077 RLG00000018079 RLG00000018081 RLG00000018087 RLG00000018089 RLG00000018092 RLG00000018096 RLG00000031799 RLG00000031800 RLG00000031812 RLG00000031817 RLG00000031823 RLG00000031824 RLG00000031825 RLG00000031826 RLG00000031853 RLG00000031856 RLG00000032101 RLG00000032235 RLG00000033958 RLG00000033978 RLG00000033983
rosa_multiflora Rmu_co8051036.1_g000001 Rmu_co8262527.1_g000001 Rmu_sc0000225.1_g000018 Rmu_sc0000299.1_g000020 Rmu_sc0000437.1_g000001 Rmu_sc0000694.1_g000007 Rmu_sc0000881.1_g000004 Rmu_sc0000898.1_g000063 Rmu_sc0000903.1_g000008 Rmu_sc0000929.1_g000012 Rmu_sc0000929.1_g000019 Rmu_sc0000929.1_g000035 Rmu_sc0000929.1_g000036 Rmu_sc0001023.1_g000049 Rmu_sc0001699.1_g000009 Rmu_sc0001715.1_g000036 Rmu_sc0001895.1_g000003 Rmu_sc0002908.1_g000023 Rmu_sc0002990.1_g000008 Rmu_sc0002990.1_g000014 Rmu_sc0003151.1_g000001 Rmu_sc0003242.1_g000015 Rmu_sc0003242.1_g000025 Rmu_sc0003242.1_g000030 Rmu_sc0003539.1_g000012 Rmu_sc0004283.1_g000002 Rmu_sc0004283.1_g000009 Rmu_sc0004283.1_g000019 Rmu_sc0004283.1_g000032 Rmu_sc0004283.1_g000033 Rmu_sc0004283.1_g000046 Rmu_sc0004283.1_g000065 Rmu_sc0004516.1_g000003 Rmu_sc0005187.1_g000002 Rmu_sc0007010.1_g000007 Rmu_sc0007102.1_g000003 Rmu_sc0007109.1_g000006 Rmu_sc0007309.1_g000001 Rmu_sc0007415.1_g000036 Rmu_sc0007415.1_g000037 Rmu_sc0007415.1_g000053 Rmu_sc0009151.1_g000002 Rmu_sc0009639.1_g000006 Rmu_sc0009639.1_g000007 Rmu_sc0009975.1_g000001 Rmu_sc0009975.1_g000009 Rmu_sc0011398.1_g000002 Rmu_sc0011941.1_g000002 Rmu_sc0011941.1_g000006 Rmu_sc0011941.1_g000023 Rmu_sc0011941.1_g000024 Rmu_sc0021845.1_g000001 Rmu_sc0042747.1_g000002 Rmu_ssc0000303.1_g000010 Rmu_ssc0000400.1_g000092
rosa_roxburghii Rroxscaffold_1G00040190 Rroxscaffold_1G00040920 Rroxscaffold_1G00041140 Rroxscaffold_1G00060620 Rroxscaffold_1G00062230 Rroxscaffold_1G00065090 Rroxscaffold_1G00065120 Rroxscaffold_1G00065130 Rroxscaffold_1G00065220 Rroxscaffold_2G00128280 Rroxscaffold_2G00129610 Rroxscaffold_2G00130000 Rroxscaffold_2G00130020 Rroxscaffold_2G00130030 Rroxscaffold_2G00130080 Rroxscaffold_2G00130100 Rroxscaffold_3G00246100 Rroxscaffold_5G00347320 Rroxscaffold_5G00347770 Rroxscaffold_5G00347790 Rroxscaffold_5G00347810 Rroxscaffold_7G00191040
rosa_rugosa Rorug02G0188200 Rorug02G0188400 Rorug02G0188600 Rorug02G0188600 Rorug02G0188900 Rorug02G0189000 Rorug02G0189000 Rorug02G0189400 Rorug02G0190000 Rorug02G0190100 Rorug04G0037000 Rorug04G0040600 Rorug04G0040700 Rorug04G0453900 Rorug04G0454000 Rorug04G0455300 Rorug04G0455500 Rorug04G0455600 Rorug04G0456400 Rorug04G0456500 Rorug04G0456500 Rorug04G0456500 Rorug04G0458500 Rorug05G0017500 Rorug05G0030700 Rorug05G0030700 Rorug05G0183800 Rorug05G0185200 Rorug05G0198700 Rorug05G0584300 Rorug06G0110500 Rorug07G0141000 Rorug07G0213100
rosa_samantha Rh1DG042100 Rh1DG069600 Rh2AG242900 Rh2AG243800 Rh2AG244400 Rh2AG244700 Rh2AG245000 Rh2AG245200 Rh2AG245500 Rh2AG245700 Rh2AG245800 Rh2AG246000 Rh2AG246300 Rh2AG246600 Rh2AG246700 Rh2AG246900 Rh2AG247100 Rh4BG110700 Rh4CG124800 Rh4CG125200 Rh4DG106800 Rh4DG110400 Rh4DG110700 Rh4DG110900 Rh5CG096000 Rh5CG309200 Rh5DG082300 Rh5DG082900 Rh5DG083000 Rh5DG085700 Rh5DG284600 Rh5DG298400 Rh6AG015900 Rh6AG217100 Rh6CG227200 Rh6DG217700 Rh6DG218500 Rh7BG268200 Rh7DG280500
rosa_wichuraiana Rw0G000200 Rw0G001440 Rw0G005670 Rw0G009590 Rw0G011250 Rw0G014650 Rw0G017420 Rw0G017500 Rw0G017870 Rw0G019090 Rw0G019490 Rw1G005510 Rw2G018990 Rw2G019060 Rw2G019110 Rw2G019120 Rw2G019160 Rw2G019200 Rw2G019430 Rw2G029540 Rw3G025270 Rw4G008870 Rw4G009440 Rw4G009450 Rw4G009470 Rw4G009490 Rw4G009530 Rw4G009540 Rw4G009570 Rw5G007640 Rw5G007650 Rw5G010730 Rw5G025450 Rw5G025460 Rw5G032390 Rw5G032420 Rw6G001520 Rw6G015380 Rw6G018950 Rw7G023670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 391
Acc36I ACCTGC 1 cut(s) 1235
AccB1I GGYRCC 1 cut(s) 266
AccB7I CCANNNNNTGG 3 cut(s) 861, 2186, 2999
AccBSI CCGCTC 1 cut(s) 468
AccI GTMKAC 5 cut(s) 170, 515, 1135, 1475, 2420
AccIII TCCGGA 1 cut(s) 775
AciI CCGC 3 cut(s) 468, 2046, 3226
AclWI GGATC 2 cut(s) 1600, 2345
AcoI YGGCCR 2 cut(s) 159, 2361
AcsI RAATTY 9 cut(s) 630, 1405, 1807, 1987, 2146, 2175, 2398, 2927, 3112
AcuI CTGAAG 3 cut(s) 614, 1389, 1967
AdeI CACNNNGTG 2 cut(s) 1301, 2240
AfaI GTAC 9 cut(s) 45, 769, 991, 1743, 2130, 2308, 2706, 2841, 3038
AfiI CCNNNNNNNGG 7 cut(s) 284, 432, 693, 861, 2186, 2979, 2999
AflIII ACRYGT 2 cut(s) 720, 2902
AjnI CCWGG 4 cut(s) 425, 565, 2061, 2332
AjuI GAANNNNNNNTTGG 6 cut(s) 437, 469, 1988, 2020, 2384, 2416
Alw21I GWGCWC 4 cut(s) 217, 1015, 2236, 2248
Alw26I GTCTC 4 cut(s) 263, 363, 1828, 2227
Alw44I GTGCAC 2 cut(s) 2232, 2244
AlwI GGATC 2 cut(s) 1600, 2345
Ama87I CYCGRG 1 cut(s) 2732
Aor13HI TCCGGA 1 cut(s) 775
AoxI GGCC 5 cut(s) 159, 695, 1060, 1153, 2361
ApaLI GTGCAC 2 cut(s) 2232, 2244
ApeKI GCWGC 7 cut(s) 77, 387, 658, 817, 880, 1766, 1769
ApoI RAATTY 9 cut(s) 630, 1405, 1807, 1987, 2146, 2175, 2398, 2927, 3112
Asp700I GAANNNNTTC 5 cut(s) 417, 2452, 2545, 2690, 3016
AspA2I CCTAGG 2 cut(s) 283, 1699
AspLEI GCGC 2 cut(s) 392, 2600
AspS9I GGNCC 5 cut(s) 435, 695, 842, 1061, 2189
AsuC2I CCSGG 1 cut(s) 1530
AsuHPI GGTGA 6 cut(s) 85, 127, 209, 1715, 3116, 3276
AsuNHI GCTAGC 1 cut(s) 2428
AvaI CYCGRG 1 cut(s) 2732
AvaII GGWCC 3 cut(s) 435, 842, 2189
AvrII CCTAGG 2 cut(s) 283, 1699
BaeGI GKGCMC 2 cut(s) 2236, 2248
BalI TGGCCA 2 cut(s) 161, 2363
BanI GGYRCC 1 cut(s) 266
BbsI GAAGAC 3 cut(s) 717, 788, 1973
Bbv12I GWGCWC 4 cut(s) 217, 1015, 2236, 2248
BbvI GCAGC 7 cut(s) 89, 374, 645, 804, 867, 1778, 1781
BccI CCATC 9 cut(s) 833, 859, 1052, 1078, 1510, 1828, 2265, 3052, 3154
BceAI ACGGC 1 cut(s) 392
BciT130I CCWGG 4 cut(s) 427, 567, 2063, 2334
BciVI GTATCC 1 cut(s) 1568
BclI TGATCA 1 cut(s) 3217
BcnI CCSGG 1 cut(s) 1530
BcoDI GTCTC 4 cut(s) 263, 363, 1828, 2227
BfmI CTRYAG 3 cut(s) 659, 1172, 3315
BfoI RGCGCY 1 cut(s) 2601
BfuAI ACCTGC 1 cut(s) 1235
BfuI GTATCC 1 cut(s) 1568
BisI GCNGC 8 cut(s) 78, 388, 659, 818, 881, 1767, 1770, 2047
BlnI CCTAGG 2 cut(s) 283, 1699
BlpI GCTNAGC 3 cut(s) 311, 2057, 2633
BlsI GCNGC 8 cut(s) 79, 389, 660, 819, 882, 1768, 1771, 2048
BmcAI AGTACT 1 cut(s) 2706
Bme1390I CCNGG 5 cut(s) 427, 567, 1530, 2063, 2334
Bme18I GGWCC 3 cut(s) 435, 842, 2189
BmeT110I CYCGRG 1 cut(s) 2732
BmgT120I GGNCC 5 cut(s) 435, 695, 842, 1061, 2189
BmiI GGNNCC 6 cut(s) 268, 340, 436, 1164, 2729, 2991
BmrFI CCNGG 5 cut(s) 427, 567, 1530, 2063, 2334
BmrI ACTGGG 3 cut(s) 202, 943, 1595
BmsI GCATC 4 cut(s) 1655, 1677, 3142, 3166
BmtI GCTAGC 1 cut(s) 2432
BmuI ACTGGG 3 cut(s) 202, 943, 1595
BpiI GAAGAC 3 cut(s) 717, 788, 1973
BplI GAGNNNNNCTC 2 cut(s) 407, 439
BpmI CTGGAG 2 cut(s) 2118, 2976
Bpu1102I GCTNAGC 3 cut(s) 311, 2057, 2633
BpuEI CTTGAG 2 cut(s) 1567, 2120
BpuMI CCSGG 1 cut(s) 1530
BsaAI YACGTR 1 cut(s) 1186
BsaBI GATNNNNATC 2 cut(s) 1050, 3216
BsaI GGTCTC 1 cut(s) 263
BsaJI CCNNGG 9 cut(s) 283, 334, 408, 1156, 1462, 1630, 1699, 2333, 2827
BsaWI WCCGGW 1 cut(s) 775
Bsc4I CCNNNNNNNGG 7 cut(s) 284, 432, 693, 861, 2186, 2979, 2999
Bse1I ACTGG 8 cut(s) 103, 170, 197, 354, 832, 949, 1282, 1590
Bse3DI GCAATG 2 cut(s) 1237, 3128
Bse8I GATNNNNATC 2 cut(s) 1050, 3216
BseAI TCCGGA 1 cut(s) 775
BseBI CCWGG 4 cut(s) 427, 567, 2063, 2334
BseDI CCNNGG 9 cut(s) 283, 334, 408, 1156, 1462, 1630, 1699, 2333, 2827
BseJI GATNNNNATC 2 cut(s) 1050, 3216
BseLI CCNNNNNNNGG 7 cut(s) 284, 432, 693, 861, 2186, 2979, 2999
BseMI GCAATG 2 cut(s) 1237, 3128
BseMII CTCAG 6 cut(s) 302, 527, 1143, 1216, 2048, 2225
BseNI ACTGG 8 cut(s) 103, 170, 197, 354, 832, 949, 1282, 1590
BseRI GAGGAG 1 cut(s) 2955
BseSI GKGCMC 2 cut(s) 2236, 2248
BseXI GCAGC 7 cut(s) 89, 374, 645, 804, 867, 1778, 1781
BseYI CCCAGC 1 cut(s) 2867
BsgI GTGCAG 2 cut(s) 2301, 3297
BshFI GGCC 5 cut(s) 161, 697, 1062, 1155, 2363
BshNI GGYRCC 1 cut(s) 266
BsiHKAI GWGCWC 4 cut(s) 217, 1015, 2236, 2248
BsiHKCI CYCGRG 1 cut(s) 2732
BsiSI CCGG 2 cut(s) 776, 1530
BslFI GGGAC 1 cut(s) 3211
BslI CCNNNNNNNGG 7 cut(s) 284, 432, 693, 861, 2186, 2979, 2999
BsmAI GTCTC 4 cut(s) 263, 363, 1828, 2227
BsmFI GGGAC 1 cut(s) 3211
BsnI GGCC 5 cut(s) 161, 697, 1062, 1155, 2363
Bso31I GGTCTC 1 cut(s) 263
BsoBI CYCGRG 1 cut(s) 2732
Bsp1286I GDGCHC 4 cut(s) 217, 1015, 2236, 2248
Bsp13I TCCGGA 1 cut(s) 775
Bsp1407I TGTACA 2 cut(s) 2128, 3036
Bsp143I GATC 6 cut(s) 532, 642, 1592, 2337, 2664, 3217
Bsp1720I GCTNAGC 3 cut(s) 311, 2057, 2633
Bsp19I CCATGG 2 cut(s) 334, 2827
BspACI CCGC 3 cut(s) 468, 2046, 3226
BspANI GGCC 5 cut(s) 161, 697, 1062, 1155, 2363
BspCNI CTCAG 6 cut(s) 303, 528, 1142, 1215, 2049, 2224
BspEI TCCGGA 1 cut(s) 775
BspLI GGNNCC 6 cut(s) 268, 340, 436, 1164, 2729, 2991
BspMAI CTGCAG 1 cut(s) 663
BspMI ACCTGC 1 cut(s) 1235
BspOI GCTAGC 1 cut(s) 2432
BspPI GGATC 2 cut(s) 1600, 2345
BspQI GCTCTTC 3 cut(s) 117, 590, 1020
BspT107I GGYRCC 1 cut(s) 266
BspTNI GGTCTC 1 cut(s) 263
BsrBI CCGCTC 1 cut(s) 468
BsrDI GCAATG 2 cut(s) 1237, 3128
BsrGI TGTACA 2 cut(s) 2128, 3036
BsrI ACTGG 8 cut(s) 103, 170, 197, 354, 832, 949, 1282, 1590
BssECI CCNNGG 9 cut(s) 283, 334, 408, 1156, 1462, 1630, 1699, 2333, 2827
BssMI GATC 6 cut(s) 532, 642, 1592, 2337, 2664, 3217
BssT1I CCWWGG 7 cut(s) 283, 334, 1156, 1462, 1630, 1699, 2827
Bst2UI CCWGG 4 cut(s) 427, 567, 2063, 2334
Bst4CI ACNGT 6 cut(s) 53, 73, 329, 1561, 2268, 3041
Bst6I CTCTTC 8 cut(s) 117, 408, 590, 1020, 2075, 2764, 3224, 3285
BstAPI GCANNNNNTGC 3 cut(s) 814, 2716, 2801
BstAUI TGTACA 2 cut(s) 2128, 3036
BstBAI YACGTR 1 cut(s) 1186
BstC8I GCNNGC 4 cut(s) 525, 1113, 2430, 3271
BstDSI CCRYGG 3 cut(s) 334, 408, 2827
BstH2I RGCGCY 1 cut(s) 2601
BstHHI GCGC 2 cut(s) 392, 2600
BstKTI GATC 6 cut(s) 535, 645, 1595, 2340, 2667, 3220
BstMAI GTCTC 4 cut(s) 263, 363, 1828, 2227
BstMBI GATC 6 cut(s) 532, 642, 1592, 2337, 2664, 3217
BstMWI GCNNNNNNNGC 7 cut(s) 116, 125, 814, 1249, 2716, 2801, 3275
BstNI CCWGG 4 cut(s) 427, 567, 2063, 2334
BstNSI RCATGY 4 cut(s) 724, 887, 2719, 2906
BstSCI CCNGG 5 cut(s) 425, 565, 1528, 2061, 2332
BstSFI CTRYAG 3 cut(s) 659, 1172, 3315
BstSLI GKGCMC 2 cut(s) 2236, 2248
BstSNI TACGTA 1 cut(s) 1186
BstV1I GCAGC 7 cut(s) 89, 374, 645, 804, 867, 1778, 1781
BstV2I GAAGAC 3 cut(s) 717, 788, 1973
BstXI CCANNNNNNTGG 1 cut(s) 839
BsuI GTATCC 1 cut(s) 1568
BsuRI GGCC 5 cut(s) 161, 697, 1062, 1155, 2363
BtgI CCRYGG 3 cut(s) 334, 408, 2827
BtsI GCAGTG 1 cut(s) 495
BtsIMutI CAGTG 6 cut(s) 347, 495, 919, 1210, 1566, 2264
BveI ACCTGC 1 cut(s) 1235
Cac8I GCNNGC 4 cut(s) 525, 1113, 2430, 3271
CfoI GCGC 2 cut(s) 392, 2600
Cfr13I GGNCC 5 cut(s) 435, 695, 842, 1061, 2189
CseI GACGC 2 cut(s) 356, 3365
Csp6I GTAC 9 cut(s) 44, 768, 990, 1742, 2129, 2307, 2705, 2840, 3037
CspCI CAANNNNNGTGG 4 cut(s) 336, 371, 895, 930
CviQI GTAC 9 cut(s) 44, 768, 990, 1742, 2129, 2307, 2705, 2840, 3037
DpnI GATC 6 cut(s) 534, 644, 1594, 2339, 2666, 3219
DpnII GATC 6 cut(s) 532, 642, 1592, 2337, 2664, 3217
DraI TTTAAA 2 cut(s) 319, 3117
DraIII CACNNNGTG 2 cut(s) 1301, 2240
EaeI YGGCCR 2 cut(s) 159, 2361
Eam1104I CTCTTC 8 cut(s) 117, 408, 590, 1020, 2075, 2764, 3224, 3285
EarI CTCTTC 8 cut(s) 117, 408, 590, 1020, 2075, 2764, 3224, 3285
Eco105I TACGTA 1 cut(s) 1186
Eco130I CCWWGG 7 cut(s) 283, 334, 1156, 1462, 1630, 1699, 2827
Eco147I AGGCCT 1 cut(s) 1155
Eco31I GGTCTC 1 cut(s) 263
Eco47I GGWCC 3 cut(s) 435, 842, 2189
Eco57I CTGAAG 3 cut(s) 614, 1389, 1967
Eco88I CYCGRG 1 cut(s) 2732
EcoO109I RGGNCCY 2 cut(s) 435, 695
EcoRII CCWGG 4 cut(s) 425, 565, 2061, 2332
EcoT14I CCWWGG 7 cut(s) 283, 334, 1156, 1462, 1630, 1699, 2827
EcoT22I ATGCAT 1 cut(s) 1670
ErhI CCWWGG 7 cut(s) 283, 334, 1156, 1462, 1630, 1699, 2827
FalI AAGNNNNNCTT 2 cut(s) 2529, 2561
FaqI GGGAC 1 cut(s) 3211
FbaI TGATCA 1 cut(s) 3217
FblI GTMKAC 5 cut(s) 170, 515, 1135, 1475, 2420
Fnu4HI GCNGC 8 cut(s) 78, 388, 659, 818, 881, 1767, 1770, 2047
Fsp4HI GCNGC 8 cut(s) 78, 388, 659, 818, 881, 1767, 1770, 2047
FspI TGCGCA 1 cut(s) 391
GlaI GCGC 2 cut(s) 391, 2599
GluI GCNGC 8 cut(s) 78, 388, 659, 818, 881, 1767, 1770, 2047
GsaI CCCAGC 1 cut(s) 2871
GsuI CTGGAG 2 cut(s) 2118, 2976
HaeII RGCGCY 1 cut(s) 2601
HaeIII GGCC 5 cut(s) 161, 697, 1062, 1155, 2363
HapII CCGG 2 cut(s) 776, 1530
HgaI GACGC 2 cut(s) 356, 3365
HhaI GCGC 2 cut(s) 392, 2600
Hin6I GCGC 2 cut(s) 390, 2598
HinP1I GCGC 2 cut(s) 390, 2598
HincII GTYRAC 3 cut(s) 791, 1267, 1688
HindII GTYRAC 3 cut(s) 791, 1267, 1688
HindIII AAGCTT 1 cut(s) 2450
HpaI GTTAAC 1 cut(s) 1267
HpaII CCGG 2 cut(s) 776, 1530
HphI GGTGA 6 cut(s) 85, 127, 209, 1715, 3116, 3276
Hpy99I CGWCG 1 cut(s) 372
HpyAV CCTTC 9 cut(s) 448, 1608, 1755, 2018, 2162, 2588, 3002, 3069, 3346
HpyCH4III ACNGT 6 cut(s) 53, 73, 329, 1561, 2268, 3041
HpyCH4IV ACGT 3 cut(s) 793, 1185, 2290
HpyF10VI GCNNNNNNNGC 7 cut(s) 116, 125, 814, 1249, 2716, 2801, 3275
HpySE526I ACGT 3 cut(s) 793, 1185, 2290
HspAI GCGC 2 cut(s) 390, 2598
Kpn2I TCCGGA 1 cut(s) 775
Ksp22I TGATCA 1 cut(s) 3217
KspAI GTTAAC 1 cut(s) 1267
Kzo9I GATC 6 cut(s) 532, 642, 1592, 2337, 2664, 3217
LguI GCTCTTC 3 cut(s) 117, 590, 1020
LmnI GCTCC 2 cut(s) 2727, 2995
Lsp1109I GCAGC 7 cut(s) 89, 374, 645, 804, 867, 1778, 1781
LweI GCATC 4 cut(s) 1655, 1677, 3142, 3166
MaeII ACGT 3 cut(s) 793, 1185, 2290
MaeIII GTNAC 7 cut(s) 202, 229, 1520, 1703, 1940, 2896, 3144
MalI GATC 6 cut(s) 534, 644, 1594, 2339, 2666, 3219
MbiI CCGCTC 1 cut(s) 468
MboI GATC 6 cut(s) 532, 642, 1592, 2337, 2664, 3217
MfeI CAATTG 2 cut(s) 528, 2976
MhlI GDGCHC 4 cut(s) 217, 1015, 2236, 2248
MlsI TGGCCA 2 cut(s) 161, 2363
MluNI TGGCCA 2 cut(s) 161, 2363
MlyI GAGTC 4 cut(s) 1787, 2157, 2247, 2426
MmeI TCCRAC 5 cut(s) 1625, 2204, 2337, 2389, 2494
Mox20I TGGCCA 2 cut(s) 161, 2363
Mph1103I ATGCAT 1 cut(s) 1670
MroI TCCGGA 1 cut(s) 775
MroXI GAANNNNTTC 5 cut(s) 417, 2452, 2545, 2690, 3016
MscI TGGCCA 2 cut(s) 161, 2363
Msp20I TGGCCA 2 cut(s) 161, 2363
MspI CCGG 2 cut(s) 776, 1530
MspR9I CCNGG 5 cut(s) 427, 567, 1530, 2063, 2334
MunI CAATTG 2 cut(s) 528, 2976
MvaI CCWGG 4 cut(s) 427, 567, 2063, 2334
MwoI GCNNNNNNNGC 7 cut(s) 116, 125, 814, 1249, 2716, 2801, 3275
NciI CCSGG 1 cut(s) 1530
NcoI CCATGG 2 cut(s) 334, 2827
NdeII GATC 6 cut(s) 532, 642, 1592, 2337, 2664, 3217
NheI GCTAGC 1 cut(s) 2428
NlaIV GGNNCC 6 cut(s) 268, 340, 436, 1164, 2729, 2991
NmuCI GTSAC 1 cut(s) 1703
NsbI TGCGCA 1 cut(s) 391
NsiI ATGCAT 1 cut(s) 1670
NspI RCATGY 4 cut(s) 724, 887, 2719, 2906
PaeR7I CTCGAG 1 cut(s) 2732
PceI AGGCCT 1 cut(s) 1155
PciI ACATGT 2 cut(s) 720, 2902
PciSI GCTCTTC 3 cut(s) 117, 590, 1020
PcsI WCGNNNNNNNCGW 1 cut(s) 2079
PdmI GAANNNNTTC 5 cut(s) 417, 2452, 2545, 2690, 3016
PfeI GAWTC 7 cut(s) 418, 1468, 1624, 2104, 2285, 2945, 3281
PflMI CCANNNNNTGG 3 cut(s) 861, 2186, 2999
PkrI GCNGC 8 cut(s) 79, 389, 660, 819, 882, 1768, 1771, 2048
PleI GAGTC 4 cut(s) 1787, 2157, 2247, 2425
PpsI GAGTC 4 cut(s) 1787, 2157, 2247, 2425
Ppu21I YACGTR 1 cut(s) 1186
PpuMI RGGWCCY 1 cut(s) 435
PscI ACATGT 2 cut(s) 720, 2902
Psp5II RGGWCCY 1 cut(s) 435
Psp6I CCWGG 4 cut(s) 425, 565, 2061, 2332
PspFI CCCAGC 1 cut(s) 2867
PspGI CCWGG 4 cut(s) 425, 565, 2061, 2332
PspN4I GGNNCC 6 cut(s) 268, 340, 436, 1164, 2729, 2991
PspPI GGNCC 5 cut(s) 435, 695, 842, 1061, 2189
PspPPI RGGWCCY 1 cut(s) 435
PsrI GAACNNNNNNTAC 4 cut(s) 1559, 1591, 2404, 2436
PstI CTGCAG 1 cut(s) 663
RsaI GTAC 9 cut(s) 45, 769, 991, 1743, 2130, 2308, 2706, 2841, 3038
RsaNI GTAC 9 cut(s) 44, 768, 990, 1742, 2129, 2307, 2705, 2840, 3037
SapI GCTCTTC 3 cut(s) 117, 590, 1020
SatI GCNGC 8 cut(s) 78, 388, 659, 818, 881, 1767, 1770, 2047
Sau3AI GATC 6 cut(s) 532, 642, 1592, 2337, 2664, 3217
Sau96I GGNCC 5 cut(s) 435, 695, 842, 1061, 2189
ScaI AGTACT 1 cut(s) 2706
SchI GAGTC 4 cut(s) 1787, 2157, 2247, 2426
ScrFI CCNGG 5 cut(s) 427, 567, 1530, 2063, 2334
SduI GDGCHC 4 cut(s) 217, 1015, 2236, 2248
SfaNI GCATC 4 cut(s) 1655, 1677, 3142, 3166
SfcI CTRYAG 3 cut(s) 659, 1172, 3315
Sfr274I CTCGAG 1 cut(s) 2732
SinI GGWCC 3 cut(s) 435, 842, 2189
SlaI CTCGAG 1 cut(s) 2732
SmlI CTYRAG 3 cut(s) 1546, 2135, 2732
SmoI CTYRAG 3 cut(s) 1546, 2135, 2732
SnaBI TACGTA 1 cut(s) 1186
SseBI AGGCCT 1 cut(s) 1155
SsiI CCGC 3 cut(s) 468, 2046, 3226
SspI AATATT 2 cut(s) 869, 2641
StuI AGGCCT 1 cut(s) 1155
StyD4I CCNGG 5 cut(s) 425, 565, 1528, 2061, 2332
StyI CCWWGG 7 cut(s) 283, 334, 1156, 1462, 1630, 1699, 2827
TaaI ACNGT 6 cut(s) 53, 73, 329, 1561, 2268, 3041
TaiI ACGT 3 cut(s) 796, 1188, 2293
TaqI TCGA 6 cut(s) 370, 2073, 2166, 2650, 2733, 2948
TatI WGTACW 4 cut(s) 2128, 2306, 2704, 3036
TauI GCSGC 1 cut(s) 2049
TfiI GAWTC 7 cut(s) 418, 1468, 1624, 2104, 2285, 2945, 3281
TscAI CASTG 6 cut(s) 354, 502, 919, 1210, 1566, 2271
TseFI GTSAC 1 cut(s) 1703
TseI GCWGC 7 cut(s) 77, 387, 658, 817, 880, 1766, 1769
Tsp45I GTSAC 1 cut(s) 1703
TspDTI ATGAA 7 cut(s) 445, 2009, 2798, 2876, 3125, 3180, 3320
TspGWI ACGGA 1 cut(s) 1636
TspRI CASTG 6 cut(s) 354, 502, 919, 1210, 1566, 2271
Van91I CCANNNNNTGG 3 cut(s) 861, 2186, 2999
VneI GTGCAC 2 cut(s) 2232, 2244
VpaK11BI GGWCC 3 cut(s) 435, 842, 2189
XapI RAATTY 9 cut(s) 630, 1405, 1807, 1987, 2146, 2175, 2398, 2927, 3112
XceI RCATGY 4 cut(s) 724, 887, 2719, 2906
XcmI CCANNNNNNNNNTGG 2 cut(s) 858, 1827
XhoI CTCGAG 1 cut(s) 2732
XmaJI CCTAGG 2 cut(s) 283, 1699
XmiI GTMKAC 5 cut(s) 170, 515, 1135, 1475, 2420
XmnI GAANNNNTTC 5 cut(s) 417, 2452, 2545, 2690, 3016
ZrmI AGTACT 1 cut(s) 2706
Zsp2I ATGCAT 1 cut(s) 1670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.